BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5515
(644 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1
Length = 342
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 164/390 (42%), Gaps = 96/390 (24%)
Query: 91 VVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDT 150
V D V +F L + L +V II++G TIT++ D + DVVLGFD LE
Sbjct: 8 VFGDLPLGAGTVEKFQLQSDQL--RVDIISWGCTITALEVKDRQGRASDVVLGFDELE-- 63
Query: 151 QLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGS 210
GY PY GA +GRVANRI G+
Sbjct: 64 -----------------------------------GYLQ-KQPYFGAVVGRVANRIAKGT 87
Query: 211 FTIDGKEYHIERNDGVIT----DTQLTHDITHPANPYMGATIGRVANRIQNG-------- 258
FT+DGKEY + N+G + + P G RV+ + G
Sbjct: 88 FTLDGKEYKLAINNGPNSLHGGVKGFDKVLWTPRVLSNGVEFSRVSPDGEEGYPGELKVW 147
Query: 259 -SFTIDGKE----YHIERNDGVNAIHGGARGFD-KRSGSRELVNHVVKLFSDSYTEVDSQ 312
+T+DG E Y + + F+ GS + +H V + +D++ VD
Sbjct: 148 VMYTLDGGELVVNYRAQASQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIEADAFLPVDEV 207
Query: 313 SLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGP 372
+PTGEI SV GTAFDLR P LG LQE GFD N+ L G+
Sbjct: 208 LIPTGEIASVQGTAFDLRKPVELGKHLQEFHVNGFDHNFCLKGS---------------- 251
Query: 373 LDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNL-RPI 431
+ R RV H SGRVL VYT QPGVQFYTG L +
Sbjct: 252 ---------------------KEKRFCARVHHAGSGRVLEVYTTQPGVQFYTGNFLDGTL 290
Query: 432 YGKQYALYDQFGAFCLETQKYPDAVHHCYY 461
GK A Y + FCLETQ +PDAV+ ++
Sbjct: 291 KGKSGAGYPKHSGFCLETQSWPDAVNQPHF 320
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 105/168 (62%), Gaps = 8/168 (4%)
Query: 474 LQVTDIQLTRDIT---LQVTDIQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGR 530
Q+ QL DI +T +++ D + +D+ L D L+GY PY GA +GR
Sbjct: 22 FQLQSDQLRVDIISWGCTITALEVK-DRQGRASDVVLGFD-ELEGYLQ-KQPYFGAVVGR 78
Query: 531 VANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGE 590
VANRI G+FT+DGKEY + N+G NS+HGG +GFDKVLW P V S+ V S SPDGE
Sbjct: 79 VANRIAKGTFTLDGKEYKLAINNGPNSLHGGVKGFDKVLWTPRVL-SNGVEFSRVSPDGE 137
Query: 591 SGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGH 638
G+PG + V VM+TL L++ Y A + TP++LTNH+YFNLAG
Sbjct: 138 EGYPGELKVWVMYTLD-GGELVVNYRAQASQTTPVNLTNHSYFNLAGQ 184
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 29 VVNDQSQSIDIVRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGW 88
V D V +F L + L +V II +G TIT++ D + DVVLGFD LEG+
Sbjct: 8 VFGDLPLGAGTVEKFQLQSDQL--RVDIISWGCTITALEVKDRQGRASDVVLGFDELEGY 65
Query: 89 LH 90
L
Sbjct: 66 LQ 67
>sp|Q96C23|GALM_HUMAN Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV=1
Length = 342
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 162/379 (42%), Gaps = 102/379 (26%)
Query: 102 VRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVT 161
V +F L + LL +V II++G TIT++ D + DVVLGF LE
Sbjct: 19 VEKFQLQSDLL--RVDIISWGCTITALEVKDRQGRASDVVLGFAELE------------- 63
Query: 162 DTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIE 221
GY PY GA IGRVANRI G+F +DGKEYH+
Sbjct: 64 ------------------------GYLQ-KQPYFGAVIGRVANRIAKGTFKVDGKEYHLA 98
Query: 222 RND-------GVITDTQLTHDITHPANPYMGATIGRVANRIQNG---------SFTIDGK 265
N GV ++ + P G R++ + G ++T+DG
Sbjct: 99 INKEPNSLHGGVRGFDKV---LWTPRVLSNGVQFSRISPDGEEGYPGELKVWVTYTLDGG 155
Query: 266 E----YHIERNDGVNAIHGGARGFDKRSGSRELVN-HVVKLFSDSYTEVDSQSLPTGEIR 320
E Y + + F+ + +N H V + +D+Y VD +PTGE+
Sbjct: 156 ELIVNYRAQASQATPVNLTNHSYFNLAGQASPNINDHEVTIEADTYLPVDETLIPTGEVA 215
Query: 321 SVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHI 380
V GTAFDLR P LG LQ+ GFD N+ L G+
Sbjct: 216 PVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGS------------------------ 251
Query: 381 TCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNL-RPIYGKQYALY 439
+HF RV H SGRVL VYT QPGVQFYTG L + GK A+Y
Sbjct: 252 ----KEKHF---------CARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGKNGAVY 298
Query: 440 DQFGAFCLETQKYPDAVHH 458
+ FCLETQ +PDAV+
Sbjct: 299 PKHSGFCLETQNWPDAVNQ 317
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 102/170 (60%), Gaps = 11/170 (6%)
Query: 476 VTDIQLTRDITLQVTDIQLTHDIT-LQVTDIQ-LTRDITL-----QGYRHPANPYMGATI 528
V QL D+ L+V I IT L+V D Q D+ L +GY PY GA I
Sbjct: 19 VEKFQLQSDL-LRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQ-KQPYFGAVI 76
Query: 529 GRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPD 588
GRVANRI G+F +DGKEYH+ N NS+HGG RGFDKVLW P V S+ V S SPD
Sbjct: 77 GRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVL-SNGVQFSRISPD 135
Query: 589 GESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGH 638
GE G+PG + V V +TL LI+ Y A + TP++LTNH+YFNLAG
Sbjct: 136 GEEGYPGELKVWVTYTLD-GGELIVNYRAQASQATPVNLTNHSYFNLAGQ 184
Score = 40.4 bits (93), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 40 VRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLH 90
V +F L + LL +V II +G TIT++ D + DVVLGF LEG+L
Sbjct: 19 VEKFQLQSDLL--RVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQ 67
>sp|Q5R8U1|GALM_PONAB Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV=1
Length = 342
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 162/379 (42%), Gaps = 102/379 (26%)
Query: 102 VRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVT 161
V +F L + LL +V II++G TIT++ D + DVVLGF LE
Sbjct: 19 VEKFQLQSDLL--RVDIISWGCTITALEVKDRQGRSSDVVLGFAELE------------- 63
Query: 162 DTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIE 221
GY PY GA IGRVANRI G+F +DGKEYH+
Sbjct: 64 ------------------------GYLQ-KQPYFGAVIGRVANRIAKGTFKVDGKEYHLA 98
Query: 222 RND-------GVITDTQLTHDITHPANPYMGATIGRVANRIQNG---------SFTIDGK 265
N GV ++ + P G R++ + G ++T+DG
Sbjct: 99 INKEPNSLHGGVRGFDKV---LWTPRVLSNGIQFSRISPDGEEGYPGELKVWVTYTLDGG 155
Query: 266 E----YHIERNDGVNAIHGGARGFD-KRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIR 320
E Y + + F+ GS + +H V + +D+Y VD +PTGE+
Sbjct: 156 ELVVNYRAQASQATPVNLTNHSYFNLAGQGSPNIYDHEVTIEADTYLPVDETLIPTGEVA 215
Query: 321 SVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHI 380
V GTAFDLR P LG LQ+ GFD N+ L G+
Sbjct: 216 PVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCLKGS------------------------ 251
Query: 381 TCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNL-RPIYGKQYALY 439
+HF RV H SGRVL VYT QPGVQFY G L + GK A+Y
Sbjct: 252 ----KEKHF---------CARVHHAASGRVLEVYTTQPGVQFYMGNFLDGTLKGKNGAVY 298
Query: 440 DQFGAFCLETQKYPDAVHH 458
+ FCLETQ +PDAV+
Sbjct: 299 PKHSGFCLETQNWPDAVNQ 317
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 103/170 (60%), Gaps = 11/170 (6%)
Query: 476 VTDIQLTRDITLQVTDIQLTHDIT-LQVTDIQ-LTRDITL-----QGYRHPANPYMGATI 528
V QL D+ L+V I IT L+V D Q + D+ L +GY PY GA I
Sbjct: 19 VEKFQLQSDL-LRVDIISWGCTITALEVKDRQGRSSDVVLGFAELEGYLQ-KQPYFGAVI 76
Query: 529 GRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPD 588
GRVANRI G+F +DGKEYH+ N NS+HGG RGFDKVLW P V S+ + S SPD
Sbjct: 77 GRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVL-SNGIQFSRISPD 135
Query: 589 GESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGH 638
GE G+PG + V V +TL L++ Y A + TP++LTNH+YFNLAG
Sbjct: 136 GEEGYPGELKVWVTYTLD-GGELVVNYRAQASQATPVNLTNHSYFNLAGQ 184
Score = 40.0 bits (92), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 40 VRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLH 90
V +F L + LL +V II +G TIT++ D + DVVLGF LEG+L
Sbjct: 19 VEKFQLQSDLL--RVDIISWGCTITALEVKDRQGRSSDVVLGFAELEGYLQ 67
>sp|Q9GKX6|GALM_PIG Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1
Length = 342
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 168/391 (42%), Gaps = 98/391 (25%)
Query: 91 VVNDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDT 150
V D V +F L + L +V II++G TIT++ D + DVVLGF L++
Sbjct: 8 VFGDLPSGAGTVEKFQLQSDQL--RVDIISWGCTITALEVKDRQGRASDVVLGFAELKEY 65
Query: 151 QLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGS 210
LQ +PY GA +GRVANRI G+
Sbjct: 66 ---------------------------------LQ-----KHPYFGAVVGRVANRIAKGT 87
Query: 211 FTIDGKEYHIERNDGVIT----DTQLTHDITHPANPYMGATIGRVANRIQNG-------- 258
FT+DGKEY + N+G + + P G RV+ + G
Sbjct: 88 FTLDGKEYKLAINNGPNSLHGGVRGFDKVLWTPRVLSNGIEFSRVSPDGEEGYPGELKVW 147
Query: 259 -SFTIDGKE----YHIERNDGVNAIHGGARGFD-KRSGSRELVNHVVKLFSDSYTEVDSQ 312
++T+DG E Y + + F+ GS + +H V + +D++ VD
Sbjct: 148 VTYTLDGGELVVNYRAQASQTTPVNLTNHSYFNLAGQGSPNIYDHEVTIEADAFLPVDET 207
Query: 313 SLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGP 372
+PTGEI V GTAFDLR P LG LQE GFD N+
Sbjct: 208 LIPTGEIAPVQGTAFDLRKPVELGKHLQEFHINGFDHNF--------------------- 246
Query: 373 LDWKLEHITCLQMRRHFEHPRYKSRSFF-RVVHPKSGRVLNVYTDQPGVQFYTGGNL-RP 430
CL+ R K + F RV H SGRVL VYT QPG+QFYTG L
Sbjct: 247 ---------CLK--------RSKEKQFCARVHHAGSGRVLEVYTTQPGIQFYTGNFLDGT 289
Query: 431 IYGKQYALYDQFGAFCLETQKYPDAVHHCYY 461
+ GK A+Y + FCLETQ +P+AV+ ++
Sbjct: 290 LKGKTGAVYPKHSGFCLETQNWPNAVNQPHF 320
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 101/169 (59%), Gaps = 9/169 (5%)
Query: 476 VTDIQLTRDITLQVTDIQLTHDIT-LQVTDIQLTRDITLQGYRH-----PANPYMGATIG 529
V QL D L+V I IT L+V D Q + G+ +PY GA +G
Sbjct: 19 VEKFQLQSD-QLRVDIISWGCTITALEVKDRQGRASDVVLGFAELKEYLQKHPYFGAVVG 77
Query: 530 RVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDG 589
RVANRI G+FT+DGKEY + N+G NS+HGG RGFDKVLW P V S+ + S SPDG
Sbjct: 78 RVANRIAKGTFTLDGKEYKLAINNGPNSLHGGVRGFDKVLWTPRVL-SNGIEFSRVSPDG 136
Query: 590 ESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGH 638
E G+PG + V V +TL L++ Y A + TP++LTNH+YFNLAG
Sbjct: 137 EEGYPGELKVWVTYTLD-GGELVVNYRAQASQTTPVNLTNHSYFNLAGQ 184
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 29 VVNDQSQSIDIVRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGW 88
V D V +F L + L +V II +G TIT++ D + DVVLGF L+ +
Sbjct: 8 VFGDLPSGAGTVEKFQLQSDQL--RVDIISWGCTITALEVKDRQGRASDVVLGFAELKEY 65
Query: 89 LH 90
L
Sbjct: 66 LQ 67
>sp|Q66HG4|GALM_RAT Aldose 1-epimerase OS=Rattus norvegicus GN=Galm PE=1 SV=1
Length = 342
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 160/385 (41%), Gaps = 114/385 (29%)
Query: 102 VRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVT 161
V +F L + LN V II++G TIT++ D K DVVLGF LE
Sbjct: 19 VEKFQLRSDQLN--VDIISWGCTITALQVKDRQGKASDVVLGFAELE------------- 63
Query: 162 DTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIE 221
GY PY GA +GRVANRI G FT+DGKEYH+
Sbjct: 64 ------------------------GYLQ-KQPYFGAVVGRVANRIAKGRFTVDGKEYHLP 98
Query: 222 RN-------------DGVITDTQLTHDITHPANPYMGATIGRVANRIQNG---------S 259
N D V+ Q+ + G RV+ + G +
Sbjct: 99 INREPNSLHGGFRGFDKVLWTPQVLSN---------GVQFSRVSPDGEEGYPGELKVWVT 149
Query: 260 FTIDGKE----YHIERNDGVNAIHGGARGFD-KRSGSRELVNHVVKLFSDSYTEVDSQSL 314
+T+DG E Y + + F+ GS ++ +H V + +D+Y VD +
Sbjct: 150 YTLDGGELVVNYRAQASQTTPVNLTNHSYFNLAGQGSPDIYDHEVTIAADAYLPVDETLI 209
Query: 315 PTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLD 374
PTG I V GTAFDLR P LG LQ GFD N+
Sbjct: 210 PTGVIAPVEGTAFDLRKPVELGKHLQSYHIHGFDHNF----------------------- 246
Query: 375 WKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNL-RPIYG 433
CL+ + + + RV H SGR+L VYT QPGVQFYTG L + G
Sbjct: 247 -------CLKESK-------EKKFCARVHHAASGRILEVYTTQPGVQFYTGNFLDGTLKG 292
Query: 434 KQYALYDQFGAFCLETQKYPDAVHH 458
K +Y + FCLETQ +PDAV+
Sbjct: 293 KSGEVYPKHSGFCLETQNWPDAVNQ 317
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 100/170 (58%), Gaps = 11/170 (6%)
Query: 476 VTDIQLTRDITLQVTDIQLTHDIT-LQVTDIQ-LTRDITL-----QGYRHPANPYMGATI 528
V QL D L V I IT LQV D Q D+ L +GY PY GA +
Sbjct: 19 VEKFQLRSD-QLNVDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQ-KQPYFGAVV 76
Query: 529 GRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPD 588
GRVANRI G FT+DGKEYH+ N NS+HGG RGFDKVLW P V S+ V S SPD
Sbjct: 77 GRVANRIAKGRFTVDGKEYHLPINREPNSLHGGFRGFDKVLWTPQVL-SNGVQFSRVSPD 135
Query: 589 GESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGH 638
GE G+PG + V V +TL L++ Y A + TP++LTNH+YFNLAG
Sbjct: 136 GEEGYPGELKVWVTYTLD-GGELVVNYRAQASQTTPVNLTNHSYFNLAGQ 184
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 40 VRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLH 90
V +F L + LN V II +G TIT++ D K DVVLGF LEG+L
Sbjct: 19 VEKFQLRSDQLN--VDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQ 67
>sp|Q8K157|GALM_MOUSE Aldose 1-epimerase OS=Mus musculus GN=Galm PE=2 SV=1
Length = 342
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 158/377 (41%), Gaps = 98/377 (25%)
Query: 102 VRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVT 161
V +F L + L+ V II++G TIT++ D K DVVLGF LE
Sbjct: 19 VEKFQLRSDQLS--VDIISWGCTITALQVKDRQGKASDVVLGFAELE------------- 63
Query: 162 DTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHI- 220
GY PY GA +GRVANRI G FTI GKEYH+
Sbjct: 64 ------------------------GYLQ-KQPYFGAVVGRVANRIAKGRFTIGGKEYHLP 98
Query: 221 ---ERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQNG---------SFTIDGKEYH 268
E N T + P G RV+ + G ++T+DG E
Sbjct: 99 VNREPNSLHGGFTGFDKVLWTPQVLTNGVQFFRVSPDGEEGYPGELKVWVTYTLDGGELV 158
Query: 269 I------ERNDGVNAIHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSV 322
I + VN + + GS + +H V + +D+Y VD +PTG I V
Sbjct: 159 INYRAQASQTTPVNLTNHSYFNLAGQ-GSPNIYDHEVTIAADAYLPVDETLIPTGVIAPV 217
Query: 323 NGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITC 382
GTAFDLR P LG LQ+ GFD N+ C
Sbjct: 218 EGTAFDLRKPVELGTHLQDYHIHGFDHNF------------------------------C 247
Query: 383 LQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNL-RPIYGKQYALYDQ 441
L+ + + + RV H SGR+L VYT QPGVQFYTG L + GK A+Y +
Sbjct: 248 LKESK-------EKKFCARVRHAASGRILEVYTTQPGVQFYTGNFLDGTLKGKNGAVYPK 300
Query: 442 FGAFCLETQKYPDAVHH 458
CLETQ +PD+V+
Sbjct: 301 HSGLCLETQNWPDSVNQ 317
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 97/174 (55%), Gaps = 20/174 (11%)
Query: 474 LQVTDIQLTRDI--------TLQVTDIQ-LTHDITLQVTDIQLTRDITLQGYRHPANPYM 524
Q+ QL+ DI LQV D Q D+ L + L+GY PY
Sbjct: 22 FQLRSDQLSVDIISWGCTITALQVKDRQGKASDVVLGFAE--------LEGYLQ-KQPYF 72
Query: 525 GATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSY 584
GA +GRVANRI G FTI GKEYH+ N NS+HGG GFDKVLW P V ++ V
Sbjct: 73 GAVVGRVANRIAKGRFTIGGKEYHLPVNREPNSLHGGFTGFDKVLWTPQVL-TNGVQFFR 131
Query: 585 TSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGH 638
SPDGE G+PG + V V +TL L+I Y A + TP++LTNH+YFNLAG
Sbjct: 132 VSPDGEEGYPGELKVWVTYTLD-GGELVINYRAQASQTTPVNLTNHSYFNLAGQ 184
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 40 VRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGWLH 90
V +F L + L+ V II +G TIT++ D K DVVLGF LEG+L
Sbjct: 19 VEKFQLRSDQLS--VDIISWGCTITALQVKDRQGKASDVVLGFAELEGYLQ 67
>sp|P05149|GALM_ACICA Aldose 1-epimerase OS=Acinetobacter calcoaceticus GN=mro PE=1 SV=1
Length = 381
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 84/119 (70%), Gaps = 4/119 (3%)
Query: 523 YMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLW--LPVVTNSDSV 580
+ G IGR ANRI N F++DGK Y++E+N+G NS+H G GFDK +W P+V+ ++V
Sbjct: 94 HFGGLIGRYANRIGNAKFSLDGKTYNLEKNNGPNSLHSGNPGFDKRVWQVKPLVSKGETV 153
Query: 581 --TMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAG 637
++ TSP+G+ GFPG + V V+++L+ N I+Y A TD+ T ++LTNH+YFNL+G
Sbjct: 154 KASLKLTSPNGDQGFPGKLDVEVIYSLSDQNEFKIEYKAKTDQPTVVNLTNHSYFNLSG 212
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 163/408 (39%), Gaps = 121/408 (29%)
Query: 97 QSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDI 156
Q +D+ +T++N+ V I++G IT ++TPD K +++VLGFD L+
Sbjct: 35 QKVDL---YTMSNNN-GVSVSFISFGGVITQILTPDAQGKQNNIVLGFDDLKG------- 83
Query: 157 TLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGK 216
+VTDT+ +G + G IGR ANRI N F++DGK
Sbjct: 84 -YEVTDTK--------------------EGI------HFGGLIGRYANRIGNAKFSLDGK 116
Query: 217 EYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQ--------------NGSFTI 262
Y++E+N+G + H NP + +V + NG
Sbjct: 117 TYNLEKNNG--------PNSLHSGNPGFDKRVWQVKPLVSKGETVKASLKLTSPNGDQGF 168
Query: 263 DGK-------------EYHIE---RNDGVNAIHGGARGFDKRSGSRE----LVNHVVKLF 302
GK E+ IE + D ++ + SG+ +++HVV+L
Sbjct: 169 PGKLDVEVIYSLSDQNEFKIEYKAKTDQPTVVNLTNHSYFNLSGAGNNPYGVLDHVVQLN 228
Query: 303 SDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWR-----GFDINYVLSGNL 357
+ D SLPTGEI SV GT FD R+PK + ++ + G+D +V+ N
Sbjct: 229 AGRILVTDQNSLPTGEIASVAGTPFDFRMPKAIVKDIRANNQQLAYGYGYDQTWVI--NQ 286
Query: 358 STMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQ 417
+ I VV PKS R + V T +
Sbjct: 287 KSQGKLNLAAI---------------------------------VVDPKSKRTMQVLTTE 313
Query: 418 PGVQFYTGGN-LRPIYGKQYALYDQFGAFCLETQKYPDAVHHCYYRVT 464
P VQ YT + L I G LY Q A LETQ +PD+ + + T
Sbjct: 314 PSVQMYTADHLLGNIVGANGVLYRQADALALETQHFPDSPNQPTFPST 361
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 35 QSIDIVRRFTLTNHLLNTQVQIIPYGATITSVITPDCYNKLDDVVLGFDYLEGW 88
Q +D+ +T++N+ V I +G IT ++TPD K +++VLGFD L+G+
Sbjct: 35 QKVDL---YTMSNNN-GVSVSFISFGGVITQILTPDAQGKQNNIVLGFDDLKGY 84
>sp|P0A9C4|GALM_SHIFL Aldose 1-epimerase OS=Shigella flexneri GN=galM PE=3 SV=1
Length = 346
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 73/116 (62%)
Query: 523 YMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTM 582
++GA+IGR ANRI N +T DG+ + + GVN +HGG GFDK W V N V
Sbjct: 68 FLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQNDRQVLF 127
Query: 583 SYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGH 638
+ +S DG+ GFPG + TV + LT DNR+ I Y AT DK P+++TNH YFNL G
Sbjct: 128 ALSSDDGDQGFPGNLGATVQYRLTDDNRISITYRATVDKPCPVNMTNHVYFNLDGE 183
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 243 YMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKR 288
++GA+IGR ANRI N +T DG+ + + GVN +HGG GFDKR
Sbjct: 68 FLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKR 113
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 114/308 (37%), Gaps = 79/308 (25%)
Query: 194 YMGATIGRVANRIQNGSFTIDGKEYHIERNDGV-------------------ITDTQLTH 234
++GA+IGR ANRI N +T DG+ + + GV D Q+
Sbjct: 68 FLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQNDRQVLF 127
Query: 235 DITH-------PANPYMGATIG-RVA--NRIQNGSFTIDGKEYHIERNDGVNAIHGGARG 284
++ P N +GAT+ R+ NRI K + + V
Sbjct: 128 ALSSDDGDQGFPGN--LGATVQYRLTDDNRISITYRATVDKPCPVNMTNHVY-------- 177
Query: 285 FDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFAL----Q 340
F+ ++ NH +++ +D Y VD +P ++SV GT+FD R K +
Sbjct: 178 FNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDD 237
Query: 341 ETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFF 400
+ + +G+D ++L ++ W D KL+
Sbjct: 238 QRKVKGYDHAFLLQAKGDGKKVAAHV---WS-ADEKLQ---------------------- 271
Query: 401 RVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCY 460
L VYT P +QFY+G L + Y + LE++ PD+ +H
Sbjct: 272 ----------LKVYTTAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPE 321
Query: 461 YRVTDTQL 468
+ D L
Sbjct: 322 WPQPDCFL 329
>sp|P0A9C3|GALM_ECOLI Aldose 1-epimerase OS=Escherichia coli (strain K12) GN=galM PE=1
SV=1
Length = 346
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 73/116 (62%)
Query: 523 YMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTM 582
++GA+IGR ANRI N +T DG+ + + GVN +HGG GFDK W V N V
Sbjct: 68 FLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQNDRQVLF 127
Query: 583 SYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNLAGH 638
+ +S DG+ GFPG + TV + LT DNR+ I Y AT DK P+++TNH YFNL G
Sbjct: 128 ALSSDDGDQGFPGNLGATVQYRLTDDNRISITYRATVDKPCPVNMTNHVYFNLDGE 183
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 243 YMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKR 288
++GA+IGR ANRI N +T DG+ + + GVN +HGG GFDKR
Sbjct: 68 FLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKR 113
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 114/308 (37%), Gaps = 79/308 (25%)
Query: 194 YMGATIGRVANRIQNGSFTIDGKEYHIERNDGV-------------------ITDTQLTH 234
++GA+IGR ANRI N +T DG+ + + GV D Q+
Sbjct: 68 FLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQLHGGPEGFDKRRWQIVNQNDRQVLF 127
Query: 235 DITH-------PANPYMGATIG-RVA--NRIQNGSFTIDGKEYHIERNDGVNAIHGGARG 284
++ P N +GAT+ R+ NRI K + + V
Sbjct: 128 ALSSDDGDQGFPGN--LGATVQYRLTDDNRISITYRATVDKPCPVNMTNHVY-------- 177
Query: 285 FDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFAL----Q 340
F+ ++ NH +++ +D Y VD +P ++SV GT+FD R K +
Sbjct: 178 FNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGTSFDFRSAKIIASEFLADDD 237
Query: 341 ETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFF 400
+ + +G+D ++L ++ W D KL+
Sbjct: 238 QRKVKGYDHAFLLQAKGDGKKVAAHV---WS-ADEKLQ---------------------- 271
Query: 401 RVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCY 460
L VYT P +QFY+G L + Y + LE++ PD+ +H
Sbjct: 272 ----------LKVYTTAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPE 321
Query: 461 YRVTDTQL 468
+ D L
Sbjct: 322 WPQPDCFL 329
>sp|P31765|GALM_HAEIN Aldose 1-epimerase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=galM PE=3 SV=2
Length = 340
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 523 YMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTM 582
Y+GA++GR ANRI N F ++G+ + N G + +HGG GFDK W + V
Sbjct: 66 YLGASVGRYANRIANAQFELNGELIKLSSNQGKHQLHGG-EGFDKRRWNIQECGENFVCF 124
Query: 583 SYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNHAYFNL 635
S S DG+ GFPG V V+V +TLT DN + I+Y DK T ++LTNH YFNL
Sbjct: 125 SLHSVDGDQGFPGNVDVSVTYTLTGDNSVKIEYAGMCDKDTALNLTNHTYFNL 177
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 110/293 (37%), Gaps = 71/293 (24%)
Query: 194 YMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQL---------THDITHPANPYM 244
Y+GA++GR ANRI N F ++G+ + N G QL +I ++
Sbjct: 66 YLGASVGRYANRIANAQFELNGELIKLSSNQG---KHQLHGGEGFDKRRWNIQECGENFV 122
Query: 245 GATI-------GRVANRIQNGSFTIDGK-----EYH--IERNDGVNAIHGGARGFDKRSG 290
++ G N + ++T+ G EY +++ +N + +
Sbjct: 123 CFSLHSVDGDQGFPGNVDVSVTYTLTGDNSVKIEYAGMCDKDTALNLTNHTYFNLENAEQ 182
Query: 291 SRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPK-----YLGFALQETQWR 345
++ H ++L +D Y VD++ +P ++ V T+FD R+ K +L Q T +
Sbjct: 183 GSDVREHTLRLNADFYLPVDNEGIPNSPLKHVVNTSFDFRIAKPIKQDFLQGDQQAT--K 240
Query: 346 GFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHP 405
G+D ++++ N + C + P
Sbjct: 241 GYDHSFIV--NKAWQKPCVLL------------------------------------TSP 262
Query: 406 KSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHH 458
L V T Q +Q YTG L + LY F LETQ PD +H
Sbjct: 263 TGDLSLEVRTSQAALQVYTGNYLAGTPTRNGELYADFSGIALETQCLPDTPNH 315
>sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GAL10 PE=1 SV=2
Length = 699
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 77/130 (59%), Gaps = 8/130 (6%)
Query: 514 QGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWL-P 572
+GY +P + Y+GATIGR ANRI G F++ K+Y + N+GVN+ H F + +L P
Sbjct: 413 EGYLNPDSAYIGATIGRYANRISKGKFSLCNKDYQLTVNNGVNANHSSIGSFHRKRFLGP 472
Query: 573 VVTN--SDSVTMSYTSPDGE--SGFPGTVHVTVMFTLTLDNR---LIIKYNATTDKKTPI 625
++ N D T Y D E + FPG + VT+ +T+ + + ++ K T + TPI
Sbjct: 473 IIQNPSKDVFTAEYMLIDNEKDTEFPGDLLVTIQYTVNVAQKSLEMVYKGKLTAGEATPI 532
Query: 626 SLTNHAYFNL 635
+LTNH+YFNL
Sbjct: 533 NLTNHSYFNL 542
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 99/266 (37%), Gaps = 52/266 (19%)
Query: 238 HPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKRSGSRELVNH 297
+P + Y+GATIGR ANRI G F++ K+Y + N+GVNA H F ++ ++ +
Sbjct: 417 NPDSAYIGATIGRYANRISKGKFSLCNKDYQLTVNNGVNANHSSIGSFHRKRFLGPIIQN 476
Query: 298 VVK-LFSDSYTEVDSQ------------------------------SLPTGEIRSVNGTA 326
K +F+ Y +D++ L GE +N T
Sbjct: 477 PSKDVFTAEYMLIDNEKDTEFPGDLLVTIQYTVNVAQKSLEMVYKGKLTAGEATPINLTN 536
Query: 327 ---FDLRLPKYLGFALQETQWRG-----FDINYVLSGNLSTMAACTYIDINWGPLDWKLE 378
F+L P E R D N + +GN+ T+ L K
Sbjct: 537 HSYFNLNKPYGDTIEGTEIMVRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNP 596
Query: 379 HITCLQMRRHFEHPRY------KSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIY 432
C + P + + HP S L V + +P QFYTG L
Sbjct: 597 QFDCCFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLSTEPTYQFYTGDFLS--- 653
Query: 433 GKQYALYDQFGAFCLETQKYPDAVHH 458
A Y+ F +E +Y DA++
Sbjct: 654 ----AGYEARQGFAIEPGRYIDAINQ 675
>sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gal10 PE=3 SV=1
Length = 713
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 11/131 (8%)
Query: 516 YRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERND-GVNSIHGGARGFDKVLWL-PV 573
Y+ NP+ GATIGR ANRI NG F +DG Y + +N+ ++HGG GFDK +L P+
Sbjct: 409 YKLKENPFFGATIGRFANRIANGQFEVDGHLYTLCKNENNKTTLHGGNNGFDKQFFLGPI 468
Query: 574 VTN-SDSVTMSY--TSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKK-----TPI 625
D T+ + DG +GFP + V +T+ +N L I+Y + + T +
Sbjct: 469 ARQYEDYNTLEFILVDKDGNNGFPSDLETLVKYTIK-NNSLEIEYKSVIPEYSKLNVTAV 527
Query: 626 SLTNHAYFNLA 636
+LTNH+Y+NLA
Sbjct: 528 NLTNHSYWNLA 538
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 103/265 (38%), Gaps = 58/265 (21%)
Query: 241 NPYMGATIGRVANRIQNGSFTIDGKEYHIERND-GVNAIHGGARGFDKR----------- 288
NP+ GATIGR ANRI NG F +DG Y + +N+ +HGG GFDK+
Sbjct: 414 NPFFGATIGRFANRIANGQFEVDGHLYTLCKNENNKTTLHGGNNGFDKQFFLGPIARQYE 473
Query: 289 -------------------SGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDL 329
S LV + +K ++ E++ +S+ E +N TA +L
Sbjct: 474 DYNTLEFILVDKDGNNGFPSDLETLVKYTIK---NNSLEIEYKSV-IPEYSKLNVTAVNL 529
Query: 330 RLPKYLGFALQETQWRGFDI----NYVLSGNLSTMAACTYIDINWG-------PLDWKLE 378
Y A G I N L N T I + W LD +
Sbjct: 530 TNHSYWNLASPNKTIDGTIIKSTTNVYLKVNSETSLPTGDI-VEWQNDITKPTKLDPNIS 588
Query: 379 HITCLQMRRH-----FEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYG 433
C + R + +Y ++ V+HP L V T +P Q YTG G
Sbjct: 589 FDNCFIVDREASKFCLDTRKYSLKNIVEVIHPSVPVKLVVSTTEPAFQLYTGD------G 642
Query: 434 KQYALYDQFGAFCLETQKYPDAVHH 458
+ FC+ET ++ +A+++
Sbjct: 643 NDICEFQSRSGFCVETGRFINALNN 667
>sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2
SV=1
Length = 689
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 15/142 (10%)
Query: 513 LQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERND-GVNSIHGGARGFDKVLWL 571
L+GY NP+ GATIGRVANRI G I+G Y + N+ S+HGG G++K +L
Sbjct: 402 LKGYLREDNPFFGATIGRVANRISKGDLLINGTHYQVGLNELHRTSLHGGTYGYNKRTFL 461
Query: 572 -PVVTNSD---SVTMSYT--SPDGESGFPGTVHVTVMFTLT---LDNRLIIKYNA----- 617
P+V ++ TM + DG G+PG V V++T+ + L I+Y A
Sbjct: 462 GPIVKTNEKEKETTMEFVLIDLDGTEGYPGDVETKVIYTVRDTGVGGELGIEYEAKLLEE 521
Query: 618 TTDKKTPISLTNHAYFNLAGHP 639
+ T +SLTNH+Y+N+ P
Sbjct: 522 SGRDSTAVSLTNHSYWNIGNQP 543
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 241 NPYMGATIGRVANRIQNGSFTIDGKEYHIERND-GVNAIHGGARGFDKRS 289
NP+ GATIGRVANRI G I+G Y + N+ ++HGG G++KR+
Sbjct: 410 NPFFGATIGRVANRISKGDLLINGTHYQVGLNELHRTSLHGGTYGYNKRT 459
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 184 LQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERND 224
L+GY NP+ GATIGRVANRI G I+G Y + N+
Sbjct: 402 LKGYLREDNPFFGATIGRVANRISKGDLLINGTHYQVGLNE 442
>sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GAL10 PE=2 SV=2
Length = 688
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 516 YRHPANPYMGATIGRVANRIQNGSFTIDGKEYH--IERNDGVNSIHGGARGFDKVLWL-P 572
Y+ +NP+ GAT+G ANRI NG+F I+GK + + DG N +H G + +L P
Sbjct: 404 YKDQSNPFFGATVGPYANRIANGTFEINGKRIQLTVSKEDG-NVVHSGINSYHSKKFLGP 462
Query: 573 VVTNSDS--VTMSYTSPDGESGFPGTVHVTVMFTLTLDNR-LIIKYNATTDKK--TPISL 627
+V N ++ T + D E+ FP + V + + + + L ++Y + + T ++
Sbjct: 463 IVKNPEAHIWTADFKYVDEETEFPARLSTLVRYKVDSEKKTLTVEYESKVAGQGSTGANI 522
Query: 628 TNHAYFNL 635
TNH YFNL
Sbjct: 523 TNHTYFNL 530
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 33/164 (20%)
Query: 187 YRHPANPYMGATIGRVANRIQNGSFTIDGKEYH--IERNDGVITDTQLTHDITHPANPYM 244
Y+ +NP+ GAT+G ANRI NG+F I+GK + + DG + + + ++ + ++
Sbjct: 404 YKDQSNPFFGATVGPYANRIANGTFEINGKRIQLTVSKEDGNVVHSGIN---SYHSKKFL 460
Query: 245 GATIGRVANRIQNGSFTIDGKE------------YHIERNDGVNAIHGGARGFDKRSGSR 292
G + I F +E Y ++ + ++ + S
Sbjct: 461 GPIVKNPEAHIWTADFKYVDEETEFPARLSTLVRYKVDSEKKTLTVEYESKVAGQGSTGA 520
Query: 293 ELVNHV----------------VKLFSDSYTEVDSQSLPTGEIR 320
+ NH V+L ++ EV+++ LPTG ++
Sbjct: 521 NITNHTYFNLNKFNEATIKGSKVQLIDNTGLEVNNKLLPTGNLK 564
>sp|P21955|GALM_STRTR Aldose 1-epimerase OS=Streptococcus thermophilus GN=galM PE=3 SV=1
Length = 348
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 527 TIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLWLPVVT-NSDSVTMS-- 583
+IGRVA RI S+T + Y + +N+G N +HGG +G W V N D V
Sbjct: 73 SIGRVAGRIGKASYTHNMVLYSLPKNEGDNCLHGGPKGMQVQNWNYVTNLNDDYVETKFI 132
Query: 584 ---YTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNA-TTDKKTPISLTNHAYFNLA 636
Y+S D GFPG V V++ + L +NRL I + A + T + TNH YFNL+
Sbjct: 133 RRLYSSVD---GFPGDVTVSISYRLNNNNRLTILFEAFDVTESTVFNPTNHVYFNLS 186
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 247 TIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGF 285
+IGRVA RI S+T + Y + +N+G N +HGG +G
Sbjct: 73 SIGRVAGRIGKASYTHNMVLYSLPKNEGDNCLHGGPKGM 111
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 69/357 (19%), Positives = 139/357 (38%), Gaps = 78/357 (21%)
Query: 116 VQIITYGATITSVITPDCYNKLDDVVLGFDYLED--------TQLTRDITLQVTDTQLTH 167
+ +T GAT+ + P L ++VLGF ED Q + ++ TH
Sbjct: 29 ISTLTTGATLQEFLVPMETGALKNIVLGFSDFEDYYKNNLCACQSIGRVAGRIGKASYTH 88
Query: 168 DITLQVTDIQLTRDITLQGYRHPANPYMGATIGRVAN-RIQNGSFTIDGKEYHIERNDGV 226
++ L Y P N G ++QN ++ + + ++E
Sbjct: 89 NMVL---------------YSLPKNEGDNCLHGGPKGMQVQNWNYVTNLNDDYVE----- 128
Query: 227 ITDTQLTHDITHPANPYMGATIGRVANRIQNGS-FTIDGKEYHIERNDGVNAIHGGARGF 285
T+ + + + G ++ R+ N + TI + + + + N + +
Sbjct: 129 ---TKFIRRLYSSVDGFPGDVTVSISYRLNNNNRLTILFEAFDVTESTVFNPTN---HVY 182
Query: 286 DKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWR 345
S ++L +H ++++SD E+DS+ +PTG+ +V+ T +D R L ++
Sbjct: 183 FNLSDKQDLSSHELQIYSDYRLELDSELIPTGQKINVDETNYDFRKTTDLLPRIEANN-- 240
Query: 346 GFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHP 405
GFD +V+ G TC ++ ++H
Sbjct: 241 GFDDAFVVGGG------------------------TCDHVKE------------VAILHD 264
Query: 406 K-SGRVLNVYTDQPGVQFYTGGNLRP-IY--GKQYALYDQFGAFCLETQKYPDAVHH 458
K SG + +++++ G+ +T ++ IY + + + A +E Q PDAV+H
Sbjct: 265 KESGDGIEIFSNRNGLVIFTMDDIEDNIYFARDKGKMAKRREAIAMEAQTLPDAVNH 321
>sp|P53757|YN9A_YEAST Uncharacterized isomerase YNR071C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YNR071C PE=1 SV=1
Length = 342
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 18/151 (11%)
Query: 502 VTDIQLTRDITLQGYRHPAN-----PYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVN 556
+ D+++ +QGY + + MGAT+GR ANRI G F++D + + N+ N
Sbjct: 32 LVDLKVNGQSVVQGYSNVQDYLTDGNMMGATVGRYANRIAKGVFSLDDGPHKLTVNNCGN 91
Query: 557 SIHGGARGFDKVLWL--PVVTNSDSVTM-------SYTSPDGESGFPGTVHVTVMFTLTL 607
+ H + + PV S V + +T P+ FPG + VTV +TL +
Sbjct: 92 TNHSSISSLNLKQYKASPVENPSKGVYVVEFKLLDDHTQPNPNE-FPGDLEVTVKYTLNV 150
Query: 608 -DNRLIIKYNATTDK--KTPISLTNHAYFNL 635
+ L ++Y A + TPI++TNH+YFNL
Sbjct: 151 AEMTLDMEYQAQLVRGDATPINMTNHSYFNL 181
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 123/329 (37%), Gaps = 78/329 (23%)
Query: 173 VTDIQLTRDITLQGYRHPAN-----PYMGATIGRVANRIQNGSFTIDGKEYHIERND--- 224
+ D+++ +QGY + + MGAT+GR ANRI G F++D + + N+
Sbjct: 32 LVDLKVNGQSVVQGYSNVQDYLTDGNMMGATVGRYANRIAKGVFSLDDGPHKLTVNNCGN 91
Query: 225 ------------------------GV-ITDTQLTHDITHP-ANPYMGATIGRVANRIQNG 258
GV + + +L D T P N + G V +
Sbjct: 92 TNHSSISSLNLKQYKASPVENPSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVA 151
Query: 259 SFTIDGKEYHIE--RNDG--VNAIHGGARGFDKRSGSRELVNHVVKLFSDSYTEV-DSQS 313
T+D EY + R D +N + +K + + VK+ S+ EV +
Sbjct: 152 EMTLD-MEYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVKVCSNKSLEVTEGAL 210
Query: 314 LPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPL 373
LPTG+I N FD P L ++T FD +++ N + + +N
Sbjct: 211 LPTGKIIERNIATFDSTKPTVLH---EDTPV--FDCTFIIDAN-KDLKTTDSVSVN---- 260
Query: 374 DWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYG 433
K F+ HP+S V T +P V YTG NL G
Sbjct: 261 ---------------------KLVPVFKAYHPESHIKFEVSTTEPTVHLYTGDNL---CG 296
Query: 434 KQYALYDQFGAFCLETQKYPDAVHHCYYR 462
K + F ++ +Y DA++ +R
Sbjct: 297 K----FVPRSGFAVQQGRYVDAINRDEWR 321
>sp|P38893|YH10_YEAST Uncharacterized isomerase YHR210C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YHR210C PE=3 SV=1
Length = 341
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 513 LQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFD-KVLWL 571
+ GY Y+GAT+GR ANRI G F+++ + + N+ N+ H F K
Sbjct: 49 IHGYISDGYNYIGATVGRYANRIYKGMFSMEDGPHQLTVNNCGNTNHSSISSFHLKKYKA 108
Query: 572 PVVTN--SDSVTMSYTSPDGES---GFPGTVHVTVMFTLTL-DNRLIIKYNA--TTDKKT 623
V N D + +T D + FPG + V + +TL + D L ++Y A + + T
Sbjct: 109 SKVQNPLDDLYIVEFTLLDDRTLPNEFPGDLAVNLKYTLNVADMTLDLEYEAKLVSGEAT 168
Query: 624 PISLTNHAYFNL 635
PI++TNH YFNL
Sbjct: 169 PINMTNHTYFNL 180
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 113/312 (36%), Gaps = 73/312 (23%)
Query: 184 LQGYRHPANPYMGATIGRVANRIQNGSFTI-DG-----------------KEYHIER--- 222
+ GY Y+GAT+GR ANRI G F++ DG +H+++
Sbjct: 49 IHGYISDGYNYIGATVGRYANRIYKGMFSMEDGPHQLTVNNCGNTNHSSISSFHLKKYKA 108
Query: 223 -------NDGVITDTQLTHDITHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDG- 274
+D I + L D T P N + G + + T+D EY + G
Sbjct: 109 SKVQNPLDDLYIVEFTLLDDRTLP-NEFPGDLAVNLKYTLNVADMTLD-LEYEAKLVSGE 166
Query: 275 ---VNAIHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSL-PTGEIRSVNGTAFDLR 330
+N + +K + + V+L SD EV +L PTG+I FD
Sbjct: 167 ATPINMTNHTYFNLNKTMDKKSISGTEVRLCSDKSLEVSEGALIPTGKIVQRKIATFDSS 226
Query: 331 LPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFE 390
P L + +D +++ N + + +N
Sbjct: 227 KPTIL-----QDDGPIYDYAFIVDEN-KNLKTTDSVSVN--------------------- 259
Query: 391 HPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQ 450
K F+ HP S L V T +P V FYTG NL + + F +E
Sbjct: 260 ----KLVPAFKAYHPASRLSLEVSTTEPTVLFYTGDNLCDGFTPR-------SGFAVEQG 308
Query: 451 KYPDAVHHCYYR 462
+Y DA++ +R
Sbjct: 309 RYVDAINRDGWR 320
>sp|Q00053|GALM_LACHE Aldose 1-epimerase (Fragment) OS=Lactobacillus helveticus GN=galM
PE=3 SV=1
Length = 129
Score = 41.6 bits (96), Expect = 0.022, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 523 YMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGFDKVLW 570
Y+G T+GR+A R++ G + + + + NDG N IHGG G D +W
Sbjct: 64 YLGGTVGRIAGRVRKGQWRHGLETHQLPINDGENHIHGGI-GTDTEVW 110
Score = 39.7 bits (91), Expect = 0.070, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 226 VITDTQLTHDITHPAN-----PYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHG 280
++ D + + PA+ Y+G T+GR+A R++ G + + + + NDG N IHG
Sbjct: 42 LLNDENMILSLNSPADYSQERNYLGGTVGRIAGRVRKGQWRHGLETHQLPINDGENHIHG 101
Query: 281 G 281
G
Sbjct: 102 G 102
>sp|Q2YDU6|NARF_RAT Nuclear prelamin A recognition factor OS=Rattus norvegicus GN=Narf
PE=2 SV=1
Length = 456
Score = 35.8 bits (81), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 29/140 (20%)
Query: 181 DITLQGYRHPANPYM-GA-------TIGRVANRIQNGSFTI----------DGKEYHIER 222
D L+ R +P + GA T G +A ++ ++ D KE + R
Sbjct: 230 DKKLEALREGLSPTLNGARGTDCVLTSGEIAQIMEQSDLSVKDIAVDTLFGDVKEMAVRR 289
Query: 223 NDGVITDTQLTHDITHPANPYMGATIGRVANR-IQNGSFTIDGKEYHIERNDGVNAIHGG 281
+DGV +D L H H A G + + R ++N F E +E+N V
Sbjct: 290 HDGVSSDGHLAHVFRHAAKELFGEHVEEITYRALRNKDF----HEVTLEKNGEVLLRFAA 345
Query: 282 ARGFDKRSGSRELVNHVVKL 301
A GF R + N ++KL
Sbjct: 346 AYGF------RNIQNMIMKL 359
>sp|Q9CYQ7|NARF_MOUSE Nuclear prelamin A recognition factor OS=Mus musculus GN=Narf PE=2
SV=1
Length = 462
Score = 35.0 bits (79), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 214 DGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANR-IQNGSFTIDGKEYHIERN 272
D KE ++R+DGV +D L H H A G + + R ++N F E +E+N
Sbjct: 287 DMKEVAVQRHDGVSSDGHLAHVFRHAAKELFGEHVEEITYRALRNKDF----HEVTLEKN 342
Query: 273 DGVNAIHGGARGFDKRSGSRELVNHVVKL 301
V A GF R + N + KL
Sbjct: 343 GEVLLRFAAAYGF------RNIQNMIQKL 365
>sp|P39840|GALM_BACSU Aldose 1-epimerase OS=Bacillus subtilis (strain 168) GN=galM PE=1
SV=2
Length = 325
Score = 33.9 bits (76), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 501 QVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYH--IERNDGVNSI 558
+ T++QL R+ H G I NRI +G+F+ G+ YH I D N +
Sbjct: 41 KTTNVQLLREPETAESFHDTPTLYGIPILFPPNRISDGTFSFRGRTYHFDINEKDKHNHL 100
Query: 559 HG 560
HG
Sbjct: 101 HG 102
>sp|Q9UHQ1|NARF_HUMAN Nuclear prelamin A recognition factor OS=Homo sapiens GN=NARF PE=1
SV=1
Length = 456
Score = 33.5 bits (75), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 21/115 (18%)
Query: 198 TIGRVANRIQNGSFTI----------DGKEYHIERNDGVITDTQLTHDITHPANPYMGAT 247
T G +A ++ G ++ D KE + R+DG +D L H H A
Sbjct: 255 TSGEIAQIMEQGDLSVRDAAVDTLFGDLKEDKVTRHDGASSDGHLAHIFRHAAKELFNED 314
Query: 248 IGRVANR-IQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKRSGSRELVNHVVKL 301
+ V R ++N F +E +E+N V A GF R + N ++KL
Sbjct: 315 VEEVTYRALRNKDF----QEVTLEKNGEVVLRFAAAYGF------RNIQNMILKL 359
>sp|P16154|TOXA_CLODI Toxin A OS=Clostridium difficile GN=toxA PE=1 SV=2
Length = 2710
Score = 33.1 bits (74), Expect = 6.8, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 14/126 (11%)
Query: 187 YRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGA 246
Y PAN Y G+ A Q+ T++GK+Y+ + N +T Q + Y
Sbjct: 2038 YFAPANTYNNNIEGQ-AIVYQSKFLTLNGKKYYFDNNSKAVTGLQTIDSKKY----YFNT 2092
Query: 247 TIGRVANRIQNGSFTIDGKEYHIERNDGVNAIHGGARGFDKRSGSRELVNHVVKLFSDSY 306
A Q TIDGK+Y+ N A G+ G + N + S Y
Sbjct: 2093 NTAEAATGWQ----TIDGKKYYFNTNTA-----EAATGWQTIDGKKYYFNTNTAIASTGY 2143
Query: 307 TEVDSQ 312
T ++ +
Sbjct: 2144 TIINGK 2149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 245,518,373
Number of Sequences: 539616
Number of extensions: 10593240
Number of successful extensions: 22259
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 22115
Number of HSP's gapped (non-prelim): 132
length of query: 644
length of database: 191,569,459
effective HSP length: 124
effective length of query: 520
effective length of database: 124,657,075
effective search space: 64821679000
effective search space used: 64821679000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)