Query psy5515
Match_columns 644
No_of_seqs 378 out of 2514
Neff 5.4
Searched_HMMs 46136
Date Fri Aug 16 19:25:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5515.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5515hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1604|consensus 100.0 7E-67 1.5E-71 540.4 29.2 300 93-483 11-351 (353)
2 PRK11055 galM galactose-1-epim 100.0 1.2E-61 2.6E-66 516.5 32.8 291 99-482 6-340 (342)
3 PTZ00485 aldolase 1-epimerase; 100.0 2.1E-61 4.6E-66 518.8 31.6 287 103-483 14-370 (376)
4 TIGR02636 galM_Leloir galactos 100.0 2.3E-59 4.9E-64 497.6 32.2 289 100-482 2-335 (335)
5 PLN00194 aldose 1-epimerase; P 100.0 4.2E-55 9.2E-60 465.3 33.8 290 98-482 5-336 (337)
6 cd09019 galactose_mutarotase_l 100.0 2E-51 4.4E-56 434.5 30.4 283 104-481 1-326 (326)
7 PRK15172 putative aldose-1-epi 100.0 7.2E-42 1.6E-46 358.4 30.5 252 103-482 11-298 (300)
8 COG2017 GalM Galactose mutarot 100.0 1.3E-40 2.8E-45 350.5 29.6 262 98-483 8-307 (308)
9 cd09022 Aldose_epim_Ec_YihR Al 100.0 1.4E-36 3E-41 314.8 27.3 245 115-478 2-283 (284)
10 TIGR02636 galM_Leloir galactos 100.0 6.2E-34 1.4E-38 302.9 19.9 160 477-638 5-172 (335)
11 PRK11055 galM galactose-1-epim 100.0 1.1E-33 2.4E-38 301.9 20.4 161 476-638 9-177 (342)
12 KOG1604|consensus 100.0 1.6E-33 3.4E-38 292.6 16.2 165 478-643 22-196 (353)
13 PF01263 Aldose_epim: Aldose 1 100.0 5.5E-32 1.2E-36 279.6 23.5 261 104-480 2-300 (300)
14 PLN00194 aldose 1-epimerase; P 100.0 6.7E-32 1.5E-36 287.7 21.3 159 477-638 10-180 (337)
15 PTZ00485 aldolase 1-epimerase; 100.0 5.4E-32 1.2E-36 291.6 19.1 160 478-639 15-193 (376)
16 cd09019 galactose_mutarotase_l 100.0 1.7E-31 3.8E-36 282.7 19.1 159 479-639 2-168 (326)
17 COG2017 GalM Galactose mutarot 100.0 5.4E-29 1.2E-33 262.5 19.2 158 477-639 13-175 (308)
18 PRK15172 putative aldose-1-epi 100.0 1.2E-28 2.6E-33 258.7 20.4 152 478-639 12-170 (300)
19 cd01081 Aldose_epim aldose 1-e 100.0 2.6E-27 5.5E-32 241.6 26.2 229 115-462 2-268 (284)
20 cd09021 Aldose_epim_Ec_YphB al 100.0 1.4E-27 3E-32 246.1 23.9 233 116-479 2-272 (273)
21 cd09022 Aldose_epim_Ec_YihR Al 99.9 1.4E-25 3E-30 232.8 17.9 140 489-638 3-149 (284)
22 PF01263 Aldose_epim: Aldose 1 99.9 2.4E-25 5.3E-30 230.1 12.4 154 478-638 2-165 (300)
23 cd01081 Aldose_epim aldose 1-e 99.9 2.2E-22 4.8E-27 205.3 17.3 145 489-638 4-155 (284)
24 cd09024 Aldose_epim_lacX Aldos 99.9 4.6E-21 1E-25 199.8 27.2 259 105-480 1-287 (288)
25 cd09024 Aldose_epim_lacX Aldos 99.9 4E-22 8.7E-27 207.7 17.4 141 479-638 1-149 (288)
26 cd09021 Aldose_epim_Ec_YphB al 99.9 6.5E-22 1.4E-26 204.0 16.4 109 523-637 37-150 (273)
27 cd09025 Aldose_epim_Slr1438 Al 99.8 2.4E-20 5.1E-25 193.0 16.5 145 478-637 3-159 (271)
28 cd09025 Aldose_epim_Slr1438 Al 99.8 3.1E-19 6.8E-24 184.7 22.9 246 104-479 3-270 (271)
29 cd09020 D-hex-6-P-epi_like D-h 99.6 2.4E-15 5.2E-20 155.9 14.0 136 479-637 2-150 (269)
30 cd09020 D-hex-6-P-epi_like D-h 98.9 2.4E-07 5.1E-12 96.5 22.3 249 105-479 2-268 (269)
31 cd09023 Aldose_epim_Ec_c4013 A 98.4 1.1E-06 2.3E-11 92.2 11.0 79 554-636 69-155 (284)
32 COG0676 Uncharacterized enzyme 98.4 1.2E-06 2.7E-11 91.1 11.0 130 479-637 27-164 (287)
33 KOG1594|consensus 98.3 4.6E-06 1E-10 85.9 11.4 136 477-638 24-176 (305)
34 cd09269 deoxyribose_mutarotase 97.9 5.2E-05 1.1E-09 80.4 9.1 96 538-635 42-146 (293)
35 cd09023 Aldose_epim_Ec_c4013 A 97.6 0.00015 3.2E-09 76.2 7.8 146 259-474 120-280 (284)
36 PF14486 DUF4432: Domain of un 87.0 35 0.00075 36.7 17.1 30 102-132 4-34 (302)
37 COG0676 Uncharacterized enzyme 85.2 39 0.00084 36.3 15.8 33 104-142 26-58 (287)
38 PF14315 DUF4380: Domain of un 77.4 43 0.00094 35.3 13.2 60 567-634 87-147 (274)
39 PF14486 DUF4432: Domain of un 76.7 9.2 0.0002 41.1 8.0 77 556-636 86-170 (302)
40 KOG1594|consensus 44.0 1.7E+02 0.0037 31.4 9.8 30 102-132 23-52 (305)
41 PF14849 YidC_periplas: YidC p 34.6 47 0.001 34.3 4.1 27 104-132 1-27 (270)
42 TIGR03593 yidC_nterm membrane 33.5 6.6E+02 0.014 27.3 14.5 41 579-626 162-203 (366)
43 cd09269 deoxyribose_mutarotase 27.1 1.2E+02 0.0026 32.5 5.8 64 209-287 42-146 (293)
44 TIGR03067 Planc_TIGR03067 Plan 22.2 2.3E+02 0.0049 25.9 5.8 62 208-272 30-95 (107)
No 1
>KOG1604|consensus
Probab=100.00 E-value=7e-67 Score=540.44 Aligned_cols=300 Identities=42% Similarity=0.641 Sum_probs=275.5
Q ss_pred eccCCCcceEEEEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccc
Q psy5515 93 NDQSQSIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQ 172 (644)
Q Consensus 93 ~~~~~~~~~~~~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (644)
+++.++.+.++.|+|.|+.+ |+|+|+++||+|+||.+||++||.+|||||||+
T Consensus 11 ~~~~~~~~~~~~~tl~n~~~-l~vti~~~GATi~sL~vpd~~gk~~DVVLGfd~-------------------------- 63 (353)
T KOG1604|consen 11 NSNTDQKQTIRVYTLGNGKG-LQVTIINLGATITSLKVPDKSGKLDDVVLGFDD-------------------------- 63 (353)
T ss_pred CCcccccCceEEEEecCCCe-eEEEEeeCCcEEEEEEcCCcCCcccceEecccc--------------------------
Confidence 55666778999999999998 999999999999999999999999999999999
Q ss_pred eeccccccccccccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccC
Q psy5515 173 VTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVA 252 (644)
Q Consensus 173 ~~~~~~~~~~~~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~ 252 (644)
+++|.....+|||||||||||||++|.|.+||+.|+|.+|++ +|++|||..| |+
T Consensus 64 -----------v~gY~~~~~~yfGatvGRvANRI~~G~F~ldgk~y~lt~N~g--------------~n~lHgg~~g-f~ 117 (353)
T KOG1604|consen 64 -----------VDGYLKDDAAYFGATVGRVANRIAKGKFSLDGKPYKLTVNNG--------------KNTLHGGIKG-FD 117 (353)
T ss_pred -----------hhhhccCCcceecceehhhhhhcccceEEECCceEEecccCC--------------CccccCCccc-cc
Confidence 899976688999999999999999999999999999999988 8999999999 99
Q ss_pred cEEeC------------------------c------EEEE-eCcEEEEEEc-------ccccc-CCCCCceeec-CCCCc
Q psy5515 253 NRIQN------------------------G------SFTI-DGKEYHIERN-------DGVNA-IHGGARGFDK-RSGSR 292 (644)
Q Consensus 253 ~~~~~------------------------g------ty~L-~~n~L~I~~~-------TpvNl-nHpg~~YFNL-g~~~~ 292 (644)
+++|. | +|+| .+++|.+.++ ||+|| ||+ |||| |+.+.
T Consensus 118 ~~~w~v~~~~~~~~i~f~~~s~dg~eg~PG~l~V~vtYtLn~~n~l~i~~~A~~~~~~TPiNLtnHs---YfNL~g~~s~ 194 (353)
T KOG1604|consen 118 KVIWEVVKHQPDGVIVFSHLSPDGDEGFPGDLKVTVTYTLNVANRLLIMMEATALDKATPINLTNHS---YFNLAGHNSG 194 (353)
T ss_pred ceEEEEEEecCCCEEEEEEECCCCCCCCCccEEEEEEEEEccCCeeeeeehhhccCCCcceeeccce---eEeccCCCCC
Confidence 99851 2 9999 4689999987 89999 999 9999 77777
Q ss_pred cccCcEEEEecceEEEeCCCCCCccceeccCCCCCCCCCCcccchhhcccC-CCCceeeEEcCCCCcccccccccccCCC
Q psy5515 293 ELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQ-WRGFDINYVLSGNLSTMAACTYIDINWG 371 (644)
Q Consensus 293 ~I~dH~L~I~A~~~~~~D~~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~~~-~~G~Dh~F~l~~~~~~~~~~~~~d~~~~ 371 (644)
+|.+|+++|.|++++|+|+.+||||++.+|++|+||||+|+.||+.+.+.. ..|||+||++++...
T Consensus 195 ~I~~heI~i~a~~~~evd~~~iPTG~I~~v~~t~fD~r~p~~lgd~~~~~~~i~g~d~n~~~~~~~~------------- 261 (353)
T KOG1604|consen 195 GIEGHEIQIEASKITEVDDTLIPTGEITPVKGTTFDFRKPTVLGDRIKQFECIVGYDINYVLDGSVP------------- 261 (353)
T ss_pred CccceEEEEeecccEecCCccccccceEeccCccccccCCeeccccccccccccCCCcceEEccCCC-------------
Confidence 999999999999999999999999999999999999999999999987765 369999999987432
Q ss_pred CCccchhhhhhhcccccccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCcccCCcCeEEeeccc
Q psy5515 372 PLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQK 451 (644)
Q Consensus 372 p~~w~~~~~~~~~l~~~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~ 451 (644)
..+.+.+|++.||+|||.|||+|+||+|||||+|+++.+.||.|+.|.+++|+|+|+|.
T Consensus 262 ---------------------~~~l~~v~k~~hp~Sgr~lEv~TnqPgvqfYTgn~~~~~~gk~g~~y~k~g~~cletq~ 320 (353)
T KOG1604|consen 262 ---------------------PNKLRKVAKAVHPKSGRKLEVSTNQPGVQFYTGNFLPDIKGKKGAVYPKHGGLCLETQY 320 (353)
T ss_pred ---------------------CcccEEEEEEEcCccCcEEEEEeCCCcEEEEeccccccccCCCceEeeccceEEeeccc
Confidence 12338899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcCCCCCCceeeeecCceeEEEEEEEeec
Q psy5515 452 YPDAVHHCYYRVTDTQLTRDITLQVTDIQLTR 483 (644)
Q Consensus 452 ~pda~n~~~~~~~~~~L~~ditl~vt~IqLtn 483 (644)
+|||+||+.||+.+. -+||.|.|+|.+++.-
T Consensus 321 ~pda~n~~~fp~v~l-~pGE~Y~h~~~y~Fsv 351 (353)
T KOG1604|consen 321 FPDAVNHPNFPSVIL-RPGETYTHETVYKFSV 351 (353)
T ss_pred CccccccCCCCceEe-cCCCeeeeEEEEEEec
Confidence 999999999999664 3499999999988753
No 2
>PRK11055 galM galactose-1-epimerase; Provisional
Probab=100.00 E-value=1.2e-61 Score=516.48 Aligned_cols=291 Identities=27% Similarity=0.447 Sum_probs=255.8
Q ss_pred cceEEEEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceecccc
Q psy5515 99 IDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQL 178 (644)
Q Consensus 99 ~~~~~~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (644)
++.+..|+|+|.++ ++|+|++|||+|++|++|+++|++.||||||++
T Consensus 6 g~~v~~~tl~n~~g-~~v~i~~~GA~i~~l~vpd~~g~~~dvvlg~~~-------------------------------- 52 (342)
T PRK11055 6 GQPYRLLTLRNNAG-MVVTLMDWGATWLSCRVPLSDGSVREVLLGCAS-------------------------------- 52 (342)
T ss_pred CCeEEEEEEECCCC-eEEEEeCcCcEEEEEEeECCCCCEeeeEECCCC--------------------------------
Confidence 36789999999887 999999999999999999999999999999998
Q ss_pred ccccccccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEEe--
Q psy5515 179 TRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQ-- 256 (644)
Q Consensus 179 ~~~~~~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~~-- 256 (644)
+++|. .+++|+||+||||||||++|+|+++|++|+|++|++ +|+||||..| |+++.|
T Consensus 53 -----~~~y~-~~~~~~Ga~iGr~anRI~~g~f~~~G~~y~L~~N~~--------------~n~lHGg~~G-~~~~~W~v 111 (342)
T PRK11055 53 -----PEDYP-DQAAYLGASVGRYANRIANSRFTLDGETYQLSPNQG--------------GNQLHGGPEG-FDKRRWQI 111 (342)
T ss_pred -----HHHHh-hCCCccCceeCCcCCcccCCEEEECCEEEEcccCCC--------------CcccCCCCcc-cCCcEEEE
Confidence 78894 467899999999999999999999999999999987 8999999999 877653
Q ss_pred ---------------C---c---------EEEEe-CcEEEEEEc------ccccc-CCCCCceeec-CC-CCccccCcEE
Q psy5515 257 ---------------N---G---------SFTID-GKEYHIERN------DGVNA-IHGGARGFDK-RS-GSRELVNHVV 299 (644)
Q Consensus 257 ---------------~---g---------ty~L~-~n~L~I~~~------TpvNl-nHpg~~YFNL-g~-~~~~I~dH~L 299 (644)
+ | +|+|+ +++|+|+|+ ||+|+ ||+ |||| |. ...+|.+|.|
T Consensus 112 ~~~~~~~v~l~~~~~~g~~GyPg~l~~~vtY~L~~~~~l~i~~~a~~d~~tp~nlt~H~---YFnL~g~~~~~~i~~h~L 188 (342)
T PRK11055 112 VNQNDRQVTFSLSSPDGDQGFPGNLGATVTYRLTDDNRVSITYRATVDKPCPVNLTNHA---YFNLDGAEEGSDVRNHKL 188 (342)
T ss_pred EEccCCEEEEEEECCCcCCCCCeEEEEEEEEEEcCCCeEEEEEEEEcCCCeEEeccccc---eEECCCCCCCCCccceEE
Confidence 1 1 99995 579999998 99999 999 9999 42 2458999999
Q ss_pred EEecceEEEeCCCCCCccceeccCCCCCCCCCCcccchhhccc----CCCCceeeEEcCCCCcccccccccccCCCCCcc
Q psy5515 300 KLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQET----QWRGFDINYVLSGNLSTMAACTYIDINWGPLDW 375 (644)
Q Consensus 300 ~I~A~~~~~~D~~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~~----~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w 375 (644)
+|+|++++++|++.||||++.+|++|+||||+++.|++.+.+. ...||||||+|++... |
T Consensus 189 ~i~a~~~~~~d~~~iPTG~~~~v~~t~~DFr~~~~l~~~~~~~~~~~~~~g~D~~fvl~~~~~----------------~ 252 (342)
T PRK11055 189 QINADEYLPVDEGGIPNGGLKSVAGTSFDFRQPKTIAQDFLADDDQQKVKGYDHAFLLQAKGD----------------G 252 (342)
T ss_pred EEecCCEEEECcccCccCcEeccCCCcccccCCcCcCcccccchhcccCCCcceEEEECCCCc----------------c
Confidence 9999999999999999999999999999999999999976321 1259999999964211 1
Q ss_pred chhhhhhhcccccccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCcccCCcCeEEeecccCCCC
Q psy5515 376 KLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDA 455 (644)
Q Consensus 376 ~~~~~~~~~l~~~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~~pda 455 (644)
.+.+|+|.+|.|||+|+|+|++|+|||||+|+++...++.|+.|.+++|||||||.+|||
T Consensus 253 --------------------~~~~a~l~~~~sg~~l~v~t~~p~lqvYT~n~~~~~~~~~g~~~~~~~gialE~q~~Pda 312 (342)
T PRK11055 253 --------------------KKPAAHLWSPDEKLQMKVYTTAPALQFYSGNFLAGTPSRGGGPYADYAGLALESQFLPDS 312 (342)
T ss_pred --------------------cceeEEEEcCCCCeEEEEEcCCCEEEEecCCccCCccCCCCcEeCCCceEEEEcccCCCc
Confidence 155799999999999999999999999999999765577889999999999999999999
Q ss_pred cCCCCCCc-eeeeecCceeEEEEEEEee
Q psy5515 456 VHHCYYRV-TDTQLTRDITLQVTDIQLT 482 (644)
Q Consensus 456 ~n~~~~~~-~~~~L~~ditl~vt~IqLt 482 (644)
+||+.||. ...+-+++.|.+.|.+++.
T Consensus 313 ~n~~~f~~~~~~L~pg~~y~~~t~y~f~ 340 (342)
T PRK11055 313 PNHPEWPQPDCILKPGEEYRSLTEYQFI 340 (342)
T ss_pred ccccCCCCCCeEECCCCEEEEEEEEEEE
Confidence 99999983 3343449999999999985
No 3
>PTZ00485 aldolase 1-epimerase; Provisional
Probab=100.00 E-value=2.1e-61 Score=518.85 Aligned_cols=287 Identities=23% Similarity=0.329 Sum_probs=249.4
Q ss_pred EEEEEEcCCceEEEEEEcCCcEEEEEEecCC-CCcccceEecCC-Ccccccccccccccccccccccccccceecccccc
Q psy5515 103 RRFTLTNHLLNTQVQIITYGATITSVITPDC-YNKLDDVVLGFD-YLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTR 180 (644)
Q Consensus 103 ~~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~-~g~~~dvvlg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (644)
..|+|+|++ |+|+|++|||+|++|++|++ +|+++||||||+ +
T Consensus 14 ~~~~L~N~~--~~v~i~n~GA~i~si~v~~~~~g~~~dvvLG~d~~---------------------------------- 57 (376)
T PTZ00485 14 KLVWLETDR--LKVGLTNYAASVASIQVYHPADNKWIEVNCGYPKN---------------------------------- 57 (376)
T ss_pred cEEEEEeCC--EEEEEECcCcEEEEEEEEcCCCCcEEeEEECCCCC----------------------------------
Confidence 379999987 99999999999999999763 399999999997 5
Q ss_pred ccccccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEEeC---
Q psy5515 181 DITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQN--- 257 (644)
Q Consensus 181 ~~~~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~~~--- 257 (644)
+++|. .+++|+||+||||||||++|+|+++|++|+|++|++ .|+||||..| |+++.|.
T Consensus 58 ---~~~Y~-~~~~y~Ga~iGr~AnRI~~G~f~ldG~~YqL~~Neg--------------~n~LHGG~~g-f~~~~W~v~~ 118 (376)
T PTZ00485 58 ---PEEAY-ADPDYMGATVGRCAGRVAGGVFTLDGVKYYTQKNRG--------------ENTCHCGDDA-YHKKHWGMKL 118 (376)
T ss_pred ---HHHHh-hCCCccCcEeCCCCCeEECCEEEECCEEEEccCCCC--------------CcccCCCCCc-cceeeeeEEE
Confidence 78894 567899999999999999999999999999999988 8999999999 9988852
Q ss_pred --------------------c---------EEEEe---CcEEEEEEc-----------ccccc-CCCCCceeec-CCC--
Q psy5515 258 --------------------G---------SFTID---GKEYHIERN-----------DGVNA-IHGGARGFDK-RSG-- 290 (644)
Q Consensus 258 --------------------g---------ty~L~---~n~L~I~~~-----------TpvNl-nHpg~~YFNL-g~~-- 290 (644)
| +|+|+ +++|+|+|+ ||+|+ ||+ |||| |..
T Consensus 119 ~~~~~~~~V~f~~~~~dg~~GfPG~l~v~vtYtL~~~~~~~L~i~y~a~~~~n~~d~~Tp~nltnH~---YFNL~g~~~~ 195 (376)
T PTZ00485 119 IETANVIGVRFNYTSPHMENGFPGELVSKVTYSIERSKPNVLKTIYDSYIPETSPADATPVNIFNHA---YWNLNGIPER 195 (376)
T ss_pred eccCCCcEEEEEEECCCcCCCCCEEEEEEEEEEEecCCCCEEEEEEEEEeccccCCccceeeeccce---eEEcCCCccc
Confidence 1 99995 689999943 89999 999 9999 431
Q ss_pred ----------CccccCcEEEEecceEEEeCCCCCCccceeccCCCCCCCCCCcccchhhcccC-----CCCceeeEEcCC
Q psy5515 291 ----------SRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQ-----WRGFDINYVLSG 355 (644)
Q Consensus 291 ----------~~~I~dH~L~I~A~~~~~~D~~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~~~-----~~G~Dh~F~l~~ 355 (644)
+.+|.+|.|+|+|++++++|+++||||++++|++|+||||+++.|++.+...+ .+||||||+|++
T Consensus 196 ~~~~~~~~~~~~~i~~h~L~i~a~~~l~~de~~IPTG~i~~v~~t~fDfr~~~~ig~~~~~~~~~~~~~~G~Dh~fvl~~ 275 (376)
T PTZ00485 196 NGKKNAVWVQPESVRNHWLRVPASRVAEADRMAIPTGEFLSVEGTGLDFRQGRVIGDCIDDVALLDRDPCGYDHPLAIDG 275 (376)
T ss_pred cccccccccCCCcccceEEEEecCcEEEeCcccCccCceeccCCCCccCcCCcccchhhhhhhhhcccCCCCCcceEECC
Confidence 23699999999999999999999999999999999999999999999874211 258999999964
Q ss_pred CCcccccccccccCCCCCccchhhhhhhcccccccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCc-ccCC
Q psy5515 356 NLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRP-IYGK 434 (644)
Q Consensus 356 ~~~~~~~~~~~d~~~~p~~w~~~~~~~~~l~~~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~-~~~~ 434 (644)
.... .+ +++|+|.+|.|||+|+|+||+|+|||||+|+++. ..++
T Consensus 276 ~~~~------------------------~~-----------~~~a~l~~p~sg~~l~v~T~~P~~qiYT~n~l~~~~~~~ 320 (376)
T PTZ00485 276 WEKG------------------------KL-----------MLHAEAKSPVTNICMKVYSTFPCMWVYTANNKPLPASGG 320 (376)
T ss_pred CCCc------------------------cc-----------cEEEEEEcCCCCCEEEEEECCCEEEEECCCCCCccccCC
Confidence 2110 01 6689999999999999999999999999999976 3678
Q ss_pred CCcccCCcCeEEeecccCCCCcCC-CCCCceeeeecCce-eEEEEEEEeec
Q psy5515 435 QYALYDQFGAFCLETQKYPDAVHH-CYYRVTDTQLTRDI-TLQVTDIQLTR 483 (644)
Q Consensus 435 ~g~~y~~~~gicLEpq~~pda~n~-~~~~~~~~~L~~di-tl~vt~IqLtn 483 (644)
.|+.|.+|+|||||||.+|||+|| |+||+++ +-+++. +.+.|.++++-
T Consensus 321 ~g~~~~~~~giclE~Q~~PDa~n~~~~fp~~v-l~pge~~~~~~t~y~f~~ 370 (376)
T PTZ00485 321 PGQRYARWTGMGLEPQYFPDVANHYPKYPSCI-VRRGERRFTETILNEFTV 370 (376)
T ss_pred CCcCcCCCCEEEEeccCCCCcccccCCCCCeE-ECCCCeEEEEEEEEEEEe
Confidence 889999999999999999999999 9999865 344888 88888888743
No 4
>TIGR02636 galM_Leloir galactose mutarotase. Members of this protein family act as galactose mutarotase (D-galactose 1-epimerase) and participate in the Leloir pathway for galactose/glucose interconversion. All members of the seed alignment for this model are found in gene clusters with other enzymes of the Leloir pathway. This enzyme family belongs to the aldose 1-epimerase family, described by pfam model pfam01263. However, the enzyme described as aldose 1-epimerase itself (EC 5.1.3.3) is called broadly specific for D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose. The restricted genome context for genes in this family suggests members should act primarily on D-galactose.
Probab=100.00 E-value=2.3e-59 Score=497.60 Aligned_cols=289 Identities=31% Similarity=0.489 Sum_probs=254.4
Q ss_pred ceEEEEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceeccccc
Q psy5515 100 DIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLT 179 (644)
Q Consensus 100 ~~~~~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (644)
+.+..|+|+|.++ ++|+|++|||+|++|++||++ +..||||||++
T Consensus 2 ~~v~~~~l~n~~g-~~v~i~~~GA~i~~l~~pd~~-~~~~vvlg~~~--------------------------------- 46 (335)
T TIGR02636 2 QPAQLITLTNNNG-MTISFMDIGATWLSCQVPLAG-ELREVLLGFAS--------------------------------- 46 (335)
T ss_pred CeeEEEEEECCCC-cEEEEeCcCcEEEEEEeeCCC-CccceEECCCC---------------------------------
Confidence 4678999999987 999999999999999999965 77899999998
Q ss_pred cccccccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEEeC--
Q psy5515 180 RDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQN-- 257 (644)
Q Consensus 180 ~~~~~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~~~-- 257 (644)
+++|. .+++|+||+||||||||++|+|+++|++|+|+.|++ +|+||||..| |+++.|+
T Consensus 47 ----~~~y~-~~~~~~Ga~igp~anRI~~g~f~~~G~~y~L~~N~~--------------~n~lHGg~~G-~~~~~W~v~ 106 (335)
T TIGR02636 47 ----MEEYY-KQDAYLGATVGRYANRIANGSFEIDGETYQLSINQG--------------GNCLHGGPEG-FDKRRWNIE 106 (335)
T ss_pred ----HHHHh-hCCCccCCCcCCCCceecCCEEEECCEEEEeccCCC--------------CcccCCCCcc-ccccEEeEe
Confidence 78884 467899999999999999999999999999999988 8999999999 8766631
Q ss_pred -------------------c---------EEEE-eCcEEEEEEc------ccccc-CCCCCceeec-CC-CCccccCcEE
Q psy5515 258 -------------------G---------SFTI-DGKEYHIERN------DGVNA-IHGGARGFDK-RS-GSRELVNHVV 299 (644)
Q Consensus 258 -------------------g---------ty~L-~~n~L~I~~~------TpvNl-nHpg~~YFNL-g~-~~~~I~dH~L 299 (644)
| +|+| ++++|+|+|+ ||+|+ ||+ |||| +. ...+|.+|.|
T Consensus 107 ~~~~~~~v~l~~~~~~~~~gyPg~l~~~vtY~L~~~~~L~i~~~a~~d~~tp~nlt~H~---YFnL~g~~~~~~i~~~~L 183 (335)
T TIGR02636 107 ELQEEVQVKFSLESPDGDQGFPGNLTVSVTYTLTDDNELTIEYEATTDKATPFNLTNHV---YFNLDGADAGSDVLSHEL 183 (335)
T ss_pred eecCCCEEEEEEECCCcCCCCCeEEEEEEEEEECCCCEEEEEEEEEECCceEEeccccc---eEEcCCCCCCCChhceEE
Confidence 1 9999 6799999998 99999 999 9999 43 3457999999
Q ss_pred EEecceEEEeCCCCCCccceeccCCCCCCCCCCcccchhhccc----CCCCceeeEEcCCCCcccccccccccCCCCCcc
Q psy5515 300 KLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQET----QWRGFDINYVLSGNLSTMAACTYIDINWGPLDW 375 (644)
Q Consensus 300 ~I~A~~~~~~D~~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~~----~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w 375 (644)
+|+|++++++|++.||||++.+|++|+||||+++.|++.+... ...||||||+++....
T Consensus 184 ~i~a~~~~~~d~~~iPtG~~~~v~~t~~Dfr~~~~l~~~~~~~~~~~~~~g~D~~f~l~~~~~----------------- 246 (335)
T TIGR02636 184 QLNADRYLPLDEEGIPLGQLKPVDGTSFDFRKEKAIGQDFLANDQQQLAKGYDHAFLLNGERL----------------- 246 (335)
T ss_pred EEECCcEEEeCCCcCcCCceecCCCCccccCCCcCcCcccccccccccCCCcceEEEECCCCC-----------------
Confidence 9999999999999999999999999999999999999886421 1248999999864210
Q ss_pred chhhhhhhcccccccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCcccCCcCeEEeecccCCCC
Q psy5515 376 KLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDA 455 (644)
Q Consensus 376 ~~~~~~~~~l~~~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~~pda 455 (644)
+ .+.+|+|.+|.|||+|+|+|++|+|||||+|+++...++.|+.|.+++|||||||.+||+
T Consensus 247 ~-------------------~~~~a~l~~~~sg~~l~v~t~~p~~~vyT~~~~~~~~~~~g~~~~~~~gialE~q~~pd~ 307 (335)
T TIGR02636 247 D-------------------GKPAAILTSPDEDLSLEVFTTQPALQIYTGNFLAGTPNRGGKKYVDHAGLALETQFLPDS 307 (335)
T ss_pred C-------------------CceeEEEEcCCCCcEEEEecCCCEEEEecCCCcCCccCCCCcEeCCCcEEEEecccCCCc
Confidence 0 044799999999999999999999999999999766677889999999999999999999
Q ss_pred cCCCCCCceeeeec-CceeEEEEEEEee
Q psy5515 456 VHHCYYRVTDTQLT-RDITLQVTDIQLT 482 (644)
Q Consensus 456 ~n~~~~~~~~~~L~-~ditl~vt~IqLt 482 (644)
+||++|+.+...|. ++.+.+.|.|++.
T Consensus 308 ~n~~~~~~~~~~L~pge~~~~~t~y~f~ 335 (335)
T TIGR02636 308 PNHPEWGDISCILSPGQEYQHQTRYQFI 335 (335)
T ss_pred ccccCCCCCceEECCCCEEEEEEEEEEC
Confidence 99999997654455 9999999999873
No 5
>PLN00194 aldose 1-epimerase; Provisional
Probab=100.00 E-value=4.2e-55 Score=465.34 Aligned_cols=290 Identities=36% Similarity=0.616 Sum_probs=254.5
Q ss_pred CcceEEEEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceeccc
Q psy5515 98 SIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQ 177 (644)
Q Consensus 98 ~~~~~~~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (644)
.++.+.+|+|+|+. ++|+|++|||+|++|.+++++|+++||||||++
T Consensus 5 ~~~~~~~~~L~n~~--l~~~i~~~GA~l~s~~~~~~~g~~~~vvlg~~~------------------------------- 51 (337)
T PLN00194 5 AEEKPGIYELKNGN--ISVKLTNYGATITSLILPDKNGKLADVVLGFDS------------------------------- 51 (337)
T ss_pred CCCeeEEEEEEeCC--EEEEEECCCcEEEEEEeECCCCCEeeeEECCCC-------------------------------
Confidence 45789999999987 999999999999999999988999999999988
Q ss_pred cccccccccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEEeC
Q psy5515 178 LTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQN 257 (644)
Q Consensus 178 ~~~~~~~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~~~ 257 (644)
.++|. .+++|+||+||||||||++|+|.++|++|+|+.|++ +|+||||..| |+++.|+
T Consensus 52 ------~~~y~-~~~~~~Ga~lgp~anRI~~g~~~~~G~~y~l~~N~~--------------~~~lHGg~~G-~~~~~w~ 109 (337)
T PLN00194 52 ------VEPYK-NDSPYFGAIVGRVANRIKGAKFTLNGVTYKLPPNNG--------------PNSLHGGPKG-FSKVVWE 109 (337)
T ss_pred ------HHHHh-hCCCccCCeeCCCCCceeCCEEEECCEEEEeccCCC--------------CcccCCCCcc-cCceEEe
Confidence 67784 347899999999999999999999999999999987 7999999988 8755420
Q ss_pred -----------------------c---------EEEEe-CcEEEEEEc-------ccccc-CCCCCceeec-CCCCcccc
Q psy5515 258 -----------------------G---------SFTID-GKEYHIERN-------DGVNA-IHGGARGFDK-RSGSRELV 295 (644)
Q Consensus 258 -----------------------g---------ty~L~-~n~L~I~~~-------TpvNl-nHpg~~YFNL-g~~~~~I~ 295 (644)
| +|+|+ +++|+|+|+ ||+|+ ||| |||| +..+.+|.
T Consensus 110 v~~~~~~~~~~v~~~l~~~~~~~gyP~~~~~~v~Y~L~~~~~L~i~~~~~n~~~~~p~~~g~Hp---YFnL~~~~~~~i~ 186 (337)
T PLN00194 110 VAKYKKGEKPSITFKYHSFDGEEGFPGDLSVTVTYTLLSSNTLRLDMEAKPLNKATPVNLAQHT---YWNLAGHNSGDIL 186 (337)
T ss_pred EEEeccCCCcEEEEEEECCCcCCCCCEEEEEEEEEEECCCCeEEEEEEEEECCCCeEEEccccc---eEEcCCCCCCCcC
Confidence 1 99996 589999997 89999 999 9999 43346899
Q ss_pred CcEEEEecceEEEeCCCCCCccceeccCCCCCCCCCCcccchhhcccCCCCceeeEEcCCCCcccccccccccCCCCCcc
Q psy5515 296 NHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDW 375 (644)
Q Consensus 296 dH~L~I~A~~~~~~D~~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w 375 (644)
+|.|+|+|+.++++|++.||||++.++++++||||.++.|++.+... ..||||||++.+..+. .
T Consensus 187 ~~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~l~~~~~~~-~~g~Dh~f~l~~~~~~--------------~- 250 (337)
T PLN00194 187 SHKIQIFGSHITPVDENLIPTGEILPVKGTPFDFTTPKKIGSRINEL-PKGYDHNYVLDGEEKE--------------G- 250 (337)
T ss_pred CeEEEEecCCEEEeCCCcCcCCceeeCCCCCcccCCCcCcchhhccc-cCCcceEEEECCCCcc--------------c-
Confidence 99999999999999999999999999999999999999999976543 2599999998652110 0
Q ss_pred chhhhhhhcccccccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCcccCCcCeEEeecccCCCC
Q psy5515 376 KLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDA 455 (644)
Q Consensus 376 ~~~~~~~~~l~~~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~~pda 455 (644)
.+..|+|.+|.|||+|+|+|++|+|||||+|++++..++.|..|.+++|||||||.+|||
T Consensus 251 --------------------~~~~a~l~~~~sg~~l~v~t~~p~v~vyT~n~~~~~~~~~~~~~~~~~~i~lEpq~~pda 310 (337)
T PLN00194 251 --------------------LKKAAKVKDPKSGRVLELWTNAPGMQFYTSNYVNGVKGKGGAVYGKHAGLCLETQGFPDA 310 (337)
T ss_pred --------------------ceeeEEEEcCCCCCEEEEEeCCCEEEEECCCCCCCccCCCCCEeCCCCEEEEeccCCCCc
Confidence 145799999999999999999999999999999876788888899999999999999999
Q ss_pred cCCCCCCceeeeecCceeEEEEEEEee
Q psy5515 456 VHHCYYRVTDTQLTRDITLQVTDIQLT 482 (644)
Q Consensus 456 ~n~~~~~~~~~~L~~ditl~vt~IqLt 482 (644)
+||++|+.+ .+.+++.+.+.|.++++
T Consensus 311 ~n~~~~~~~-~L~pge~~~~~t~y~f~ 336 (337)
T PLN00194 311 VNQPNFPSV-VVNPGEKYKHTMLFEFS 336 (337)
T ss_pred ccCCCCCCe-EECCCCEEEEEEEEEEe
Confidence 999999863 33449999999999986
No 6
>cd09019 galactose_mutarotase_like galactose mutarotase_like. Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.
Probab=100.00 E-value=2e-51 Score=434.51 Aligned_cols=283 Identities=42% Similarity=0.668 Sum_probs=245.0
Q ss_pred EEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceeccccccccc
Q psy5515 104 RFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDIT 183 (644)
Q Consensus 104 ~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (644)
+|+|+|+++ ++|+|+++||+|++|.+++++|++.|+|+|+++
T Consensus 1 ~~~l~n~~~-~~~~i~~~GA~l~~l~~~~~~g~~~~~v~~~~~------------------------------------- 42 (326)
T cd09019 1 LYTLTNGNG-LRVSILNYGATIQSLKVPDKNGKLRDVVLGFDD------------------------------------- 42 (326)
T ss_pred CEEEECCCC-cEEEEECcCcEEEEEEEECCCCCEeeeEECCCC-------------------------------------
Confidence 378999955 999999999999999999888888999999988
Q ss_pred cccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEEeC------
Q psy5515 184 LQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQN------ 257 (644)
Q Consensus 184 ~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~~~------ 257 (644)
.++| ..+++++|++|||+||||++|+|.++|++|+|++|++ +|+||||..| |+++.|+
T Consensus 43 ~~~~-~~~~~~~g~~lgp~anRi~~g~~~~~G~~y~l~~Ne~--------------~~~LHGg~~G-~~~~~w~~~~~~~ 106 (326)
T cd09019 43 LEDY-LKNSPYFGATVGRVANRIANGRFTLDGKTYQLEANEG--------------PNHLHGGPKG-FDKRVWDVEEVEE 106 (326)
T ss_pred HHHH-hhCCCccCCcccCcCCeecCCEEEECCEEEEccCCCC--------------CcccCCCCcc-ccCcEEeEEeccC
Confidence 6788 4567999999999999999999999999999999988 8999999999 8766531
Q ss_pred --------------c---------EEEEeC-cEEEEEEc------ccccc-CCCCCceeec-CCCCccccCcEEEEecce
Q psy5515 258 --------------G---------SFTIDG-KEYHIERN------DGVNA-IHGGARGFDK-RSGSRELVNHVVKLFSDS 305 (644)
Q Consensus 258 --------------g---------ty~L~~-n~L~I~~~------TpvNl-nHpg~~YFNL-g~~~~~I~dH~L~I~A~~ 305 (644)
| +|+|++ ++|+|+|+ ||+|+ +|| |||| +....++.+|+|+++|++
T Consensus 107 ~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~L~i~~~~~~~~~~p~~~g~Hp---yFnl~~~~~~~~~~~~L~~~a~~ 183 (326)
T cd09019 107 NSVTFSLVSPDGEEGFPGNLTVTVTYTLTDDNELTIEYEATTDKPTPVNLTNHS---YFNLAGEGSGDILDHELQINADR 183 (326)
T ss_pred CEEEEEEECCcccCCCCeEEEEEEEEEECCCCEEEEEEEEEeCCCeEeccccee---eEecCCCCCCCccceEEEEecCc
Confidence 1 999987 89999998 89999 999 9999 433457999999999999
Q ss_pred EEEeCCCCCCccceeccCCCCCCCCCCcccchhhcc-----cCCCCceeeEEcCCCCcccccccccccCCCCCccchhhh
Q psy5515 306 YTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQE-----TQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHI 380 (644)
Q Consensus 306 ~~~~D~~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~-----~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~ 380 (644)
++++|++.||||++.+++++++||++++.|+ .+.. ....++||||++++....
T Consensus 184 ~~~~d~~~iPtG~~~~~~~~~~df~~~~~l~-~~~~~~~~~~~~~~~D~~f~l~~~~~~--------------------- 241 (326)
T cd09019 184 YLPVDEELIPTGEILPVAGTPFDFRKPKPIG-RIDLDDEQLKLGGGYDHNFVLDKGGGK--------------------- 241 (326)
T ss_pred EEeeCCCCCcCCCceecCCCCccccCccCcc-ccccchhhcccCCCcceEEEECCCCCc---------------------
Confidence 9999999999999999999999999999998 2211 113589999998652110
Q ss_pred hhhcccccccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCcccCCcCeEEeecccCCCCcCCCC
Q psy5515 381 TCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCY 460 (644)
Q Consensus 381 ~~~~l~~~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~~pda~n~~~ 460 (644)
.+..|+|.+|.+|++|+|+|++|++||||++.++....++|+.|.+++|||||||.+|||+|+++
T Consensus 242 ---------------~~~~a~l~~~~sg~~l~v~t~~p~~~vyT~~~~~~~~~~~~~~~~~~~~iclEpq~~pdA~n~~~ 306 (326)
T cd09019 242 ---------------LRPAARLTSPESGRKLEVYTTQPGVQFYTGNFLDGTPGGGGKVYGKRSGFCLETQHFPDAPNHPN 306 (326)
T ss_pred ---------------cceeEEEEcCCCCcEEEEecCCCEEEEEeCCCCCcccCCCCcEeCCCCEEEEeccCCCCcccccC
Confidence 14579999999999999999999999999999876666788889999999999999999999998
Q ss_pred CCceeeeecCceeEEEEEEEe
Q psy5515 461 YRVTDTQLTRDITLQVTDIQL 481 (644)
Q Consensus 461 ~~~~~~~L~~ditl~vt~IqL 481 (644)
++.+. +-+|+.+.+.+.|++
T Consensus 307 ~g~~~-L~pge~~~~~~~y~f 326 (326)
T cd09019 307 FPSII-LRPGETYRHTTVYRF 326 (326)
T ss_pred CCCeE-ECCCCEEEEEEEEEC
Confidence 87533 244999999998874
No 7
>PRK15172 putative aldose-1-epimerase; Provisional
Probab=100.00 E-value=7.2e-42 Score=358.40 Aligned_cols=252 Identities=19% Similarity=0.267 Sum_probs=209.0
Q ss_pred EEEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceecccccccc
Q psy5515 103 RRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDI 182 (644)
Q Consensus 103 ~~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (644)
..++|+|+. ++|+|+++||+|++|++. | .+||+|++.
T Consensus 11 ~~~~l~~~~--~~v~i~~~Ga~i~~l~~~---~--~~vv~~~~~------------------------------------ 47 (300)
T PRK15172 11 QTISLAAGD--YQATIVTVGAGLAELTFQ---G--RHLVIPHKP------------------------------------ 47 (300)
T ss_pred CEEEEeCCC--EEEEEecCCcEEEEEEEC---C--EEEEecCCc------------------------------------
Confidence 368899988 999999999999999994 2 489999964
Q ss_pred ccccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEEe------
Q psy5515 183 TLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQ------ 256 (644)
Q Consensus 183 ~~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~~------ 256 (644)
++| .++|+|++|+||||||++|+|.++|++|+|+.|++ .++|+|||+...| .+.+.
T Consensus 48 --~~~---~~~~~g~~L~P~anRI~~g~f~~~G~~y~L~~N~~------------~~~~~lHG~~~~~-~W~v~~~~~~~ 109 (300)
T PRK15172 48 --EEM---PLAHLGKVLIPWPNRIANGCYRYQGQEYQLPINEH------------VSKAAIHGLLAWR-DWQISELTATS 109 (300)
T ss_pred --ccc---CccccccEecccCCeecCCEEEECCEEEECCCCCC------------CCCcccCCCccCc-eEEEEEecCCE
Confidence 335 35789999999999999999999999999999975 2479999994331 11110
Q ss_pred ----------Cc---------EEEEe-CcEEEEEEc--------ccccc-CCCCCceeecCCCCccccCcEEEEecceEE
Q psy5515 257 ----------NG---------SFTID-GKEYHIERN--------DGVNA-IHGGARGFDKRSGSRELVNHVVKLFSDSYT 307 (644)
Q Consensus 257 ----------~g---------ty~L~-~n~L~I~~~--------TpvNl-nHpg~~YFNLg~~~~~I~dH~L~I~A~~~~ 307 (644)
.| +|+|+ +++|+|+|+ +|+|+ ||| ||||+. .++.+|+|+++|++++
T Consensus 110 v~l~~~~~~~~gyP~~~~~~v~y~L~~~~~L~i~~~~~n~~~~~~P~~~g~Hp---YFnl~~--~~~~~~~L~~~a~~~~ 184 (300)
T PRK15172 110 VTLTAFLPPSYGYPFMLASQVIYSLDAATGLSVEIASQNIGDVPAPYGVGIHP---YLTCNL--TSVDEYLLQLPANQVL 184 (300)
T ss_pred EEEEEEcCCCCCCCEEEEEEEEEEEccCCeEEEEEEEEECCCCceeeEEecCc---eEecCC--CChhceEEEEeCCeEE
Confidence 12 89997 589999998 89999 999 999942 4789999999999999
Q ss_pred EeCCCCCCccceeccCCCCCCCCCCcccchhhcccCCCCceeeEEcCCCCcccccccccccCCCCCccchhhhhhhcccc
Q psy5515 308 EVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRR 387 (644)
Q Consensus 308 ~~D~~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~~~~~l~~ 387 (644)
++|++.|||| +.++++++|||++++.|++. +|||||++...
T Consensus 185 ~~d~~~iPtg-~~~~~~~~~df~~~~~l~~~-------~~D~~f~~~~~------------------------------- 225 (300)
T PRK15172 185 AVDEHANPTT-LHHVDELDLDFSQAKKIAAT-------KIDHTFKTAND------------------------------- 225 (300)
T ss_pred ecCCCcCCCc-cccCCCCCcCCCCCeECCCC-------CccCEEEcCCC-------------------------------
Confidence 9999999998 78899999999999999876 89999996431
Q ss_pred cccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCcccCCcCeEEeecccCC-CCcCCCCCCceee
Q psy5515 388 HFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYP-DAVHHCYYRVTDT 466 (644)
Q Consensus 388 ~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~~p-da~n~~~~~~~~~ 466 (644)
...|+|.+|.+|++|++.|++|++||||++.+ .+++||||||.+| ||+|+ +++. ..
T Consensus 226 ---------~~~~~l~~~~~g~~l~~~~~~~~~~vyt~~~~------------~~~~~ciEp~t~p~dA~n~-~~g~-~~ 282 (300)
T PRK15172 226 ---------LWEVRITHPQQALSVSLCSDQPWLQIYSGEKL------------QRQGLAVEPMSCPPNAFNS-GIDL-LL 282 (300)
T ss_pred ---------ceEEEEEeCCCCeEEEEEcCCCEEEEECCCCC------------CCCEEEEeCCCCCCCCCCC-CCCC-EE
Confidence 12589999999999999999999999999864 2689999999766 99996 4553 33
Q ss_pred eecCceeEEEEEEEee
Q psy5515 467 QLTRDITLQVTDIQLT 482 (644)
Q Consensus 467 ~L~~ditl~vt~IqLt 482 (644)
+.+|+.+.....|++.
T Consensus 283 L~pge~~~~~~~i~~~ 298 (300)
T PRK15172 283 LEPGKTHRLFFNIGGQ 298 (300)
T ss_pred ECCCCEEEEEEEEEEE
Confidence 3348888777777765
No 8
>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=350.48 Aligned_cols=262 Identities=32% Similarity=0.488 Sum_probs=219.0
Q ss_pred CcceEEEEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceeccc
Q psy5515 98 SIDIVRRFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQ 177 (644)
Q Consensus 98 ~~~~~~~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (644)
.+..+..+++.|+.+ +.+++.++||+|++|++.+ .+||+|+++
T Consensus 8 ~~~~~~~i~~~~~~~-~~~~~~~~GA~l~~l~~~~-----~~v~l~~~~------------------------------- 50 (308)
T COG2017 8 DGQPVRLLTLGNGGG-MVVTVPDWGATLTSLRVNG-----RNLLLGFDD------------------------------- 50 (308)
T ss_pred CCCceEEEEEeCCCe-EEEEEccCCcEEEEEEECC-----ceEEeecCC-------------------------------
Confidence 346788999999987 9999999999999999932 699999997
Q ss_pred cccccccccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEEeC
Q psy5515 178 LTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQN 257 (644)
Q Consensus 178 ~~~~~~~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~~~ 257 (644)
+++|. ..+.|+||+||||||||++|+|+++|++|+|++|++ +|++||+..+ +++++++
T Consensus 51 ------~~~~~-~~~~~~ga~l~p~anRI~~g~f~~~G~~y~L~~N~~--------------~~~lHG~~~~-~~~~v~~ 108 (308)
T COG2017 51 ------AESYP-ATRGYGGAILGPYANRISNGRFTLDGKTYQLPPNEG--------------GNALHGGARD-FDWQVWE 108 (308)
T ss_pred ------HHHhc-cccccccceecCccCcccCCEEEECCEEEEeCCCCC--------------CccccCCccC-CCeeEEE
Confidence 67885 344489999999999999999999999999999997 8999999999 7887731
Q ss_pred ------------------c---------EEEEeCcEEEEEEc--------ccccc-CCCCCceeecCCCCccccCcEEEE
Q psy5515 258 ------------------G---------SFTIDGKEYHIERN--------DGVNA-IHGGARGFDKRSGSRELVNHVVKL 301 (644)
Q Consensus 258 ------------------g---------ty~L~~n~L~I~~~--------TpvNl-nHpg~~YFNLg~~~~~I~dH~L~I 301 (644)
| +|+|+++.|+|+|+ ||+|+ +|| ||||....+ .+|.+++
T Consensus 109 ~~~~~~~~~~l~~~~~~~gyP~~l~~~vtY~L~~~~L~v~~~~~n~~~~~~p~~~g~Hp---YFnl~~~~~--~~~~~~~ 183 (308)
T COG2017 109 AEEDDNAEFSLVLRDGEDGYPGNLEATVTYTLNEDGLTVTYEVTNDGDEPTPFNLGNHP---YFNLPGDGR--LEHILAI 183 (308)
T ss_pred EEeccCCEEEEEecccCCCCCceEEEEEEEEEcCCCEEEEEEEEeCCCCcceecccccc---eEecCCCCC--cccEEEe
Confidence 1 99997777999998 89999 999 999932222 7899999
Q ss_pred ecceEEEeCC-CCCCccceeccCCCCCCCCCCcccchhhcccCCCCceeeEEcCCCCcccccccccccCCCCCccchhhh
Q psy5515 302 FSDSYTEVDS-QSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHI 380 (644)
Q Consensus 302 ~A~~~~~~D~-~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~ 380 (644)
+++.++++++ ..||+|.+. ++++.++..+... ..|||+|.+..... |
T Consensus 184 ~~~~~l~~~~~~~ip~~~~~---------~~~~~~~~~~~~~--~~~d~~f~~~~~~~----------------~----- 231 (308)
T COG2017 184 ASDYYLPVDDEEPIPTGDIK---------REPKPLEDDFAAD--DPYDHAFLLNGARG----------------L----- 231 (308)
T ss_pred cCCceEEcccCCCCCccccc---------ccccccccccccc--cccccceeeccccC----------------C-----
Confidence 9999999987 799999754 4444454443222 13899999865211 1
Q ss_pred hhhcccccccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCcccCCcCeEEeeccc-CCCCcCCC
Q psy5515 381 TCLQMRRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQK-YPDAVHHC 459 (644)
Q Consensus 381 ~~~~l~~~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~-~pda~n~~ 459 (644)
+..|+|.+|.++++|+|.|++|++|+||++.+. +++|||||||. +|||+||+
T Consensus 232 ----------------~~~a~l~~~~~~~~l~v~t~~p~~~~yt~~~~~-----------~~~~~clEp~~~~pdA~n~~ 284 (308)
T COG2017 232 ----------------KPAARLYDPDSGLSLEVETDEPFVQLYTGNFLA-----------GRDGLCLEPQSGLPDAFNHP 284 (308)
T ss_pred ----------------cceEEEEcCCCCeEEEEEeCCCeEEEEeCCCCC-----------cCCeEEeeeccCCCCcCCCC
Confidence 447999999999999999999999999999763 57999999997 99999999
Q ss_pred CCCceeeeecCceeEEEEEEEeec
Q psy5515 460 YYRVTDTQLTRDITLQVTDIQLTR 483 (644)
Q Consensus 460 ~~~~~~~~L~~ditl~vt~IqLtn 483 (644)
+++... +-+|+.+...+.++++.
T Consensus 285 ~~~~~~-L~pGe~~~~~~~~~~~~ 307 (308)
T COG2017 285 GFGLIV-LEPGETYSAETRFRFES 307 (308)
T ss_pred Ccccce-eCCCCEEEEEEEEEEec
Confidence 999987 34499999999998864
No 9
>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR. Proteins similar to Escherichia coli YihR are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=100.00 E-value=1.4e-36 Score=314.78 Aligned_cols=245 Identities=20% Similarity=0.290 Sum_probs=196.1
Q ss_pred EEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceeccccccccccccccCCCCCC
Q psy5515 115 QVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPY 194 (644)
Q Consensus 115 ~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 194 (644)
+|+|+++||+|++|.+ +| .|+|+|+++ .+ | ...+
T Consensus 2 ~v~i~~~Ga~l~~~~~---~g--~~il~~~~~-------------------------------------~~-~---~~~~ 35 (284)
T cd09022 2 RAVVTEVGAGLRSLTV---GG--RDLVEPYPA-------------------------------------DE-V---PPGA 35 (284)
T ss_pred EEEEEecCcEEEEEEE---CC--EEEEecCCC-------------------------------------cc-C---Cccc
Confidence 6899999999999998 23 599999987 33 3 3578
Q ss_pred ccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEEe----------------Cc
Q psy5515 195 MGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQ----------------NG 258 (644)
Q Consensus 195 ~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~~----------------~g 258 (644)
+|++|||+||||++|+|.++|++|+|+.|++ .++|++||+...+ .+++. +|
T Consensus 36 ~g~~l~p~~nRi~~g~~~~~G~~y~l~~N~~------------~~~~~~HG~~~~~-~w~v~~~~~~~v~l~l~~~~~~~ 102 (284)
T cd09022 36 AGQVLAPWPNRIADGRYTFDGVEHQLPITEP------------ERGNAIHGLVRWA-DWQLVEHTDSSVTLRTRIPPQPG 102 (284)
T ss_pred cccEEeeeCCcccCCEEEECCEEEEccCcCC------------CCCCCCcCCeecc-eEEEeeccCCeEEEEEEeCCccC
Confidence 9999999999999999999999999999975 2489999996432 22220 11
Q ss_pred ---------EEEEeCcEEEEEEc--------ccccc-CCCCCceeecCCCCccccCcEEEEecceEEEeCCCCCCcccee
Q psy5515 259 ---------SFTIDGKEYHIERN--------DGVNA-IHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIR 320 (644)
Q Consensus 259 ---------ty~L~~n~L~I~~~--------TpvNl-nHpg~~YFNLg~~~~~I~dH~L~I~A~~~~~~D~~~IPTG~i~ 320 (644)
+|+|++++|+|+|+ +|+|+ +|| ||||+. .++.+|+|+++|++++++|++.||||+ .
T Consensus 103 yP~~~~~~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~Hp---yF~l~~--~~~~~~~L~~~a~~~~~~d~~~lptg~-~ 176 (284)
T cd09022 103 YPFTLELTVTYELDDDGLTVTLTATNVGDEPAPFGVGFHP---YLSAGG--APLDECTLTLPADTWLPVDERLLPTGT-E 176 (284)
T ss_pred CCceEEEEEEEEEcCCcEEEEEEEEeCCCCCeEeeeEecc---eEecCC--CCcccEEEEEECceEEecCCccCCCcC-c
Confidence 89998888999998 89999 999 999952 258999999999999999999999998 5
Q ss_pred ccCCCCCCCCCCcccchhhcccCCCCceeeEEcCCCCcccccccccccCCCCCccchhhhhhhcccccccCCCCcceeEE
Q psy5515 321 SVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFF 400 (644)
Q Consensus 321 ~V~gt~fDFr~p~~Lg~~l~~~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~~~~~l~~~~~~~~~~~~~~a 400 (644)
++.++.+|||+++.|++. ++||||++...... .+..|
T Consensus 177 ~~~~~~~df~~~~~l~~~-------~~D~~f~~~~~~~~------------------------------------~~~~~ 213 (284)
T cd09022 177 PVAGTPYDFRTGRRLGGT-------ALDTAFTDLTRDAD------------------------------------GRARA 213 (284)
T ss_pred CCCCCCccCcCCccccCc-------cccccccccccCCC------------------------------------CcEEE
Confidence 788899999999999875 89999996432110 13478
Q ss_pred EEEeCCCCeEEEEEeCC--CEEEEEeCCCCCcccCCCCcccCCcCeEEeeccc-CCCCcCCCCCCceeeeecCceeEEEE
Q psy5515 401 RVVHPKSGRVLNVYTDQ--PGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQK-YPDAVHHCYYRVTDTQLTRDITLQVT 477 (644)
Q Consensus 401 ~l~~p~sg~~L~v~Td~--p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~-~pda~n~~~~~~~~~~L~~ditl~vt 477 (644)
+|.+|.+ +.|+|.+++ |++||||++.++. +.++.+||||||. +|||+|+. ++ ...+..|+.+....
T Consensus 214 ~l~~~~~-~~l~l~~~~~~~~~~vyt~~~~~~--------~~~~~~iclEP~~~~~da~n~~-~~-~~~L~pge~~~~~~ 282 (284)
T cd09022 214 RLTGPDG-RGVELWADESFPWVQVFTADTLPP--------PGRRRGLAVEPMTCPPNAFNSG-TD-LIVLAPGETHTASW 282 (284)
T ss_pred EEECCCC-CEEEEEECCCCCEEEEECCCCCCC--------CCCCCEEEEccCCCCCCcCcCC-CC-cEEECCCCEEEEEE
Confidence 9999988 999999987 5999999987642 2457999999996 58999984 43 23333377766554
Q ss_pred E
Q psy5515 478 D 478 (644)
Q Consensus 478 ~ 478 (644)
.
T Consensus 283 ~ 283 (284)
T cd09022 283 G 283 (284)
T ss_pred e
Confidence 3
No 10
>TIGR02636 galM_Leloir galactose mutarotase. Members of this protein family act as galactose mutarotase (D-galactose 1-epimerase) and participate in the Leloir pathway for galactose/glucose interconversion. All members of the seed alignment for this model are found in gene clusters with other enzymes of the Leloir pathway. This enzyme family belongs to the aldose 1-epimerase family, described by pfam model pfam01263. However, the enzyme described as aldose 1-epimerase itself (EC 5.1.3.3) is called broadly specific for D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose. The restricted genome context for genes in this family suggests members should act primarily on D-galactose.
Probab=100.00 E-value=6.2e-34 Score=302.92 Aligned_cols=160 Identities=44% Similarity=0.732 Sum_probs=146.0
Q ss_pred EEEEeeccceEEEEEcCCcceeEee-------eeecccCcccCcccccCCCCCCCCCeEeccccccCCCeeEECCEEEEe
Q psy5515 477 TDIQLTRDITLQVTDIQLTHDITLQ-------VTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHI 549 (644)
Q Consensus 477 t~IqLtng~~lav~~~~gGa~l~~~-------~~dvv~G~di~~~eY~~~~~~~~GaiLgP~aNRI~~G~f~~dG~~Y~L 549 (644)
..|+|+|++.++|.+...||.+... .+|+++|++ ++++|.. ++.|+|++||||||||++|+|+++|++|+|
T Consensus 5 ~~~~l~n~~g~~v~i~~~GA~i~~l~~pd~~~~~~vvlg~~-~~~~y~~-~~~~~Ga~igp~anRI~~g~f~~~G~~y~L 82 (335)
T TIGR02636 5 QLITLTNNNGMTISFMDIGATWLSCQVPLAGELREVLLGFA-SMEEYYK-QDAYLGATVGRYANRIANGSFEIDGETYQL 82 (335)
T ss_pred EEEEEECCCCcEEEEeCcCcEEEEEEeeCCCCccceEECCC-CHHHHhh-CCCccCCCcCCCCceecCCEEEECCEEEEe
Confidence 4688999887888888877776443 268999998 7999986 578999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCcceeEEEEE-ecCCEEEEEEEcCCCCCCCCeEEEEEEEEEEecCCeEEEEEEEEeCCceeeeec
Q psy5515 550 ERNDGVNSIHGGARGFDKVLWLPVV-TNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLT 628 (644)
Q Consensus 550 ~~Neg~n~LHGg~~g~~~~~W~v~~-~~~~sVtls~~~~d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atnd~~tP~nlg 628 (644)
++|+++|+||||..||+++.|+++. .+.++|+|++.++++++||||+++++|+|+|+++++|+|+|+++++++||||+|
T Consensus 83 ~~N~~~n~lHGg~~G~~~~~W~v~~~~~~~~v~l~~~~~~~~~gyPg~l~~~vtY~L~~~~~L~i~~~a~~d~~tp~nlt 162 (335)
T TIGR02636 83 SINQGGNCLHGGPEGFDKRRWNIEELQEEVQVKFSLESPDGDQGFPGNLTVSVTYTLTDDNELTIEYEATTDKATPFNLT 162 (335)
T ss_pred ccCCCCcccCCCCccccccEEeEeeecCCCEEEEEEECCCcCCCCCeEEEEEEEEEECCCCEEEEEEEEEECCceEEecc
Confidence 9999999999999999999999987 777899999999989999999999999999976789999999999999999999
Q ss_pred cccceeCCCC
Q psy5515 629 NHAYFNLAGH 638 (644)
Q Consensus 629 ~HpYFnL~G~ 638 (644)
|||||||+|.
T Consensus 163 ~H~YFnL~g~ 172 (335)
T TIGR02636 163 NHVYFNLDGA 172 (335)
T ss_pred ccceEEcCCC
Confidence 9999999985
No 11
>PRK11055 galM galactose-1-epimerase; Provisional
Probab=100.00 E-value=1.1e-33 Score=301.89 Aligned_cols=161 Identities=43% Similarity=0.718 Sum_probs=146.6
Q ss_pred EEEEEeeccceEEEEEcCCcceeEe-e-------eeecccCcccCcccccCCCCCCCCCeEeccccccCCCeeEECCEEE
Q psy5515 476 VTDIQLTRDITLQVTDIQLTHDITL-Q-------VTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEY 547 (644)
Q Consensus 476 vt~IqLtng~~lav~~~~gGa~l~~-~-------~~dvv~G~di~~~eY~~~~~~~~GaiLgP~aNRI~~G~f~~dG~~Y 547 (644)
+..|+|+|++.++|++...||.+.+ . .+|+|+|++ ++++|.. ++.|+|++||||||||++|+|+++|++|
T Consensus 9 v~~~tl~n~~g~~v~i~~~GA~i~~l~vpd~~g~~~dvvlg~~-~~~~y~~-~~~~~Ga~iGr~anRI~~g~f~~~G~~y 86 (342)
T PRK11055 9 YRLLTLRNNAGMVVTLMDWGATWLSCRVPLSDGSVREVLLGCA-SPEDYPD-QAAYLGASVGRYANRIANSRFTLDGETY 86 (342)
T ss_pred EEEEEEECCCCeEEEEeCcCcEEEEEEeECCCCCEeeeEECCC-CHHHHhh-CCCccCceeCCcCCcccCCEEEECCEEE
Confidence 3468899887788888888887644 2 267999998 7999986 4689999999999999999999999999
Q ss_pred EecCCCCCCCCCCCCCCCcceeEEEEEecCCEEEEEEEcCCCCCCCCeEEEEEEEEEEecCCeEEEEEEEEeCCceeeee
Q psy5515 548 HIERNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISL 627 (644)
Q Consensus 548 ~L~~Neg~n~LHGg~~g~~~~~W~v~~~~~~sVtls~~~~d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atnd~~tP~nl 627 (644)
+|++|+++|+||||..||+++.|+++..++++|+|++.++++++||||++.++|+|+|+++++|+|+++++++++||+|+
T Consensus 87 ~L~~N~~~n~lHGg~~G~~~~~W~v~~~~~~~v~l~~~~~~g~~GyPg~l~~~vtY~L~~~~~l~i~~~a~~d~~tp~nl 166 (342)
T PRK11055 87 QLSPNQGGNQLHGGPEGFDKRRWQIVNQNDRQVTFSLSSPDGDQGFPGNLGATVTYRLTDDNRVSITYRATVDKPCPVNL 166 (342)
T ss_pred EcccCCCCcccCCCCcccCCcEEEEEEccCCEEEEEEECCCcCCCCCeEEEEEEEEEEcCCCeEEEEEEEEcCCCeEEec
Confidence 99999999999999999999999998887889999999999999999999999999999777999999999999999999
Q ss_pred ccccceeCCCC
Q psy5515 628 TNHAYFNLAGH 638 (644)
Q Consensus 628 g~HpYFnL~G~ 638 (644)
||||||||+|+
T Consensus 167 t~H~YFnL~g~ 177 (342)
T PRK11055 167 TNHAYFNLDGA 177 (342)
T ss_pred cccceEECCCC
Confidence 99999999985
No 12
>KOG1604|consensus
Probab=100.00 E-value=1.6e-33 Score=292.61 Aligned_cols=165 Identities=50% Similarity=0.823 Sum_probs=154.0
Q ss_pred EEEeeccceEEEEEcCCcceeEe--------eeeecccCcccCcccccCCCCCCCCCeEeccccccCCCeeEECCEEEEe
Q psy5515 478 DIQLTRDITLQVTDIQLTHDITL--------QVTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHI 549 (644)
Q Consensus 478 ~IqLtng~~lav~~~~gGa~l~~--------~~~dvv~G~di~~~eY~~~~~~~~GaiLgP~aNRI~~G~f~~dG~~Y~L 549 (644)
.|+|+++..++|.+...||.+.+ ++.|||+||| ++++|...+.+||||++||+||||++|+|+++|+.|+|
T Consensus 22 ~~tl~n~~~l~vti~~~GATi~sL~vpd~~gk~~DVVLGfd-~v~gY~~~~~~yfGatvGRvANRI~~G~F~ldgk~y~l 100 (353)
T KOG1604|consen 22 VYTLGNGKGLQVTIINLGATITSLKVPDKSGKLDDVVLGFD-DVDGYLKDDAAYFGATVGRVANRIAKGKFSLDGKPYKL 100 (353)
T ss_pred EEEecCCCeeEEEEeeCCcEEEEEEcCCcCCcccceEeccc-chhhhccCCcceecceehhhhhhcccceEEECCceEEe
Confidence 58999999999999988888644 4578999999 89999986788999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCcceeEEEEEecCCEE-EEEEEcCCCCCCCCeEEEEEEEEEEecCCeEEEEEEEEe-CCceeeee
Q psy5515 550 ERNDGVNSIHGGARGFDKVLWLPVVTNSDSV-TMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATT-DKKTPISL 627 (644)
Q Consensus 550 ~~Neg~n~LHGg~~g~~~~~W~v~~~~~~sV-tls~~~~d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atn-d~~tP~nl 627 (644)
++|+++|+||||..||+++.|+++....+++ +|++.++++++||||++.+.|+|+|+.++.|.+.++++. +++||+||
T Consensus 101 t~N~g~n~lHgg~~gf~~~~w~v~~~~~~~~i~f~~~s~dg~eg~PG~l~V~vtYtLn~~n~l~i~~~A~~~~~~TPiNL 180 (353)
T KOG1604|consen 101 TVNNGKNTLHGGIKGFDKVIWEVVKHQPDGVIVFSHLSPDGDEGFPGDLKVTVTYTLNVANRLLIMMEATALDKATPINL 180 (353)
T ss_pred cccCCCccccCCcccccceEEEEEEecCCCEEEEEEECCCCCCCCCccEEEEEEEEEccCCeeeeeehhhccCCCcceee
Confidence 9999999999999999999999998876666 999999999999999999999999999999999999998 99999999
Q ss_pred ccccceeCCCCCCCCC
Q psy5515 628 TNHAYFNLAGHPVSHV 643 (644)
Q Consensus 628 g~HpYFnL~G~~~~~~ 643 (644)
++|.||||+|+.++.|
T Consensus 181 tnHsYfNL~g~~s~~I 196 (353)
T KOG1604|consen 181 TNHSYFNLAGHNSGGI 196 (353)
T ss_pred ccceeEeccCCCCCCc
Confidence 9999999999988754
No 13
>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5.1.3.3 from EC) (mutarotase) is the enzyme responsible for the anomeric interconversion of D-glucose and other aldoses between their alpha- and beta-forms. The sequence of mutarotase from two bacteria, Acinetobacter calcoaceticus and Streptococcus thermophilus is available []. It has also been shown that, on the basis of extensive sequence similarities, a mutarotase domain seems to be present in the C-terminal half of the fungal GAL10 protein which encodes, in the N-terminal part, UDP-glucose 4-epimerase.; GO: 0016853 isomerase activity, 0005975 carbohydrate metabolic process; PDB: 1YGA_A 3DCD_A 2CIQ_A 2CIS_A 2CIR_A 2HTB_C 2HTA_B 3Q1N_A 1NSZ_B 1NSR_B ....
Probab=100.00 E-value=5.5e-32 Score=279.58 Aligned_cols=261 Identities=27% Similarity=0.344 Sum_probs=218.4
Q ss_pred EEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceeccccccccc
Q psy5515 104 RFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDIT 183 (644)
Q Consensus 104 ~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (644)
.|+|+|+.+ ++++|.++||.|.||++++ + ..++++++++
T Consensus 2 ~itL~n~~~-~~~~i~~~Ga~l~s~~~~~-~--~~~~l~~~~~------------------------------------- 40 (300)
T PF01263_consen 2 LITLENGNG-LSAVIPEYGAELTSLQVKG-N--GREVLWQPDP------------------------------------- 40 (300)
T ss_dssp EEEEEETTS-EEEEEETBTTEEEEEEETT-T--TEESB-B-ST-------------------------------------
T ss_pred EEEEECCCc-eEEEEeccCcEEEEEEECC-C--CeEEecCCCC-------------------------------------
Confidence 689999944 9999999999999999987 3 4799999887
Q ss_pred cccccCCCCCCccceEccccCcccCceEEECCEEEEeecCC-CcccccccccccCCCCCCccCCCCCccCcEE----e-C
Q psy5515 184 LQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERND-GVITDTQLTHDITHPANPYMGATIGRVANRI----Q-N 257 (644)
Q Consensus 184 ~~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~-~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~----~-~ 257 (644)
.+.|. ..+ ++|++++|+||||++|+|+++|+.|+++.|. . ++++||+... ..+.+ . +
T Consensus 41 ~~~~~-~~~-~~~~~l~p~~~Ri~~g~~~~~g~~~~l~~~~~~--------------~~~~HG~~~~-~~w~v~~~~~~~ 103 (300)
T PF01263_consen 41 ADAYW-SNS-FGGPILFPWPNRIRNGRFTFDGKPYCLPWNGPY--------------PNPIHGFARN-KPWEVEEQSEDD 103 (300)
T ss_dssp HHHHH-HST-CTTCEECSCSSEEGGGEEEETTEEEEBSSSBTT--------------TBEETBSGGG-SB-EEEEEEETT
T ss_pred hHHhc-ccc-cceeeeecccceEECCEEEECCEEEEeeeccCC--------------CcCCCCCccc-ccEEEEEecccc
Confidence 56774 334 8899999999999999999999999999997 4 8999999765 23333 1 1
Q ss_pred c-----------------------EEEEeCcE-EEEEEc-------ccccc-CCCCCceeecCCCCccccCcEEEEecce
Q psy5515 258 G-----------------------SFTIDGKE-YHIERN-------DGVNA-IHGGARGFDKRSGSRELVNHVVKLFSDS 305 (644)
Q Consensus 258 g-----------------------ty~L~~n~-L~I~~~-------TpvNl-nHpg~~YFNLg~~~~~I~dH~L~I~A~~ 305 (644)
+ +|+|.++. |+|+|+ +|+++ +|| |||++.. ++.+|.++++++.
T Consensus 104 ~~~~~~~~~~~~~~~yP~~~~l~~~y~L~~~~~L~i~~~v~n~~~~~p~~~g~Hp---yF~l~~~--~~~~~~~~~~~~~ 178 (300)
T PF01263_consen 104 SVSFTLVSDPDGEEGYPFDFRLRITYTLDENGKLTITYEVTNDGKPMPFNLGFHP---YFNLPGE--DIDDHQLQVPADE 178 (300)
T ss_dssp EEEEEEEEEETTHHHSSSEEEEEEEEEEETTEEEEEEEEEEESSSEEEEBEEEEE---EEETTCT--SGTTGEEEEEEEE
T ss_pred eEEEEEEecCccceeeccceeeEEEEEECCCCeEEEEEEEEecCccEEeeccccc---eEEcCCc--ceeeeEEEeccce
Confidence 1 89998888 999997 79999 999 9999422 8899999999999
Q ss_pred EEEeCCCCCCccceeccCCCCCCCCCCcccchhhcccCCCCceeeEEcCCCCcccccccccccCCCCCccchhhhhhhcc
Q psy5515 306 YTEVDSQSLPTGEIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQM 385 (644)
Q Consensus 306 ~~~~D~~~IPTG~i~~V~gt~fDFr~p~~Lg~~l~~~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~~~~~l 385 (644)
++++|++.||||++.+++++++||++++.+++.. .++|++|.+.+. .
T Consensus 179 ~~~~~~~~lptg~~~~~~~~~~d~~~~~~i~~~~-----~~~D~~f~~~~~-~--------------------------- 225 (300)
T PF01263_consen 179 YLELDERLLPTGELAPVKGTPFDFRQGRPIGDDI-----PGLDHCFVLDPP-G--------------------------- 225 (300)
T ss_dssp EEEEETTSSEEEEEEETTTCETCGSSSEEECSSC-----TCEEEEEEESSS-S---------------------------
T ss_pred eeecccccCCceeeecccCCccccccCeeecccc-----cccceEEEcCCC-c---------------------------
Confidence 9999999999999999999999999999998762 279999997542 0
Q ss_pred cccccCCCCcceeEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCcccCCcCeEEeecccCCCCcCCCCCCcee
Q psy5515 386 RRHFEHPRYKSRSFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQKYPDAVHHCYYRVTD 465 (644)
Q Consensus 386 ~~~~~~~~~~~~~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~~pda~n~~~~~~~~ 465 (644)
...+++.++.+++.|++.+++|++||||++..+ .+....++|+||+.++++.|++.++ ..
T Consensus 226 -----------~~~~~~~~~~~~i~l~~~~~~p~~~v~t~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 285 (300)
T PF01263_consen 226 -----------RPVIRLRSPGSGISLEFSTSFPWLVVWTPGFDP--------KYICIEPIAIEPDFVPDEANNPGKG-LI 285 (300)
T ss_dssp -----------EEEEEEETTTEEEEEEEEESSSEEEEEEETTSS--------TEETTCEEECEEESECECCCECCHE-GE
T ss_pred -----------cEEEEeecccceEEEEecCCCCcEEEECCCCcc--------cccCCcccccCCCeeecccccCCCC-CE
Confidence 447888999999999999999999999998642 3556789999999999999999877 34
Q ss_pred eeecCceeEEEEEEE
Q psy5515 466 TQLTRDITLQVTDIQ 480 (644)
Q Consensus 466 ~~L~~ditl~vt~Iq 480 (644)
.+-.|+.+...+.|.
T Consensus 286 ~L~pGe~~~~~~~~~ 300 (300)
T PF01263_consen 286 VLAPGESYSFSTRYT 300 (300)
T ss_dssp EEETTSEEEEEEEEE
T ss_pred EECCCCEEEEEEEEC
Confidence 434499999887663
No 14
>PLN00194 aldose 1-epimerase; Provisional
Probab=100.00 E-value=6.7e-32 Score=287.65 Aligned_cols=159 Identities=41% Similarity=0.721 Sum_probs=141.4
Q ss_pred EEEEeeccceEEEEEcCCcceeEe-ee-------eecccCcccCcccccCCCCCCCCCeEeccccccCCCeeEECCEEEE
Q psy5515 477 TDIQLTRDITLQVTDIQLTHDITL-QV-------TDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYH 548 (644)
Q Consensus 477 t~IqLtng~~lav~~~~gGa~l~~-~~-------~dvv~G~di~~~eY~~~~~~~~GaiLgP~aNRI~~G~f~~dG~~Y~ 548 (644)
..++|+|+. ++|++...||.+.+ .+ +|+++|++ +.++|+++ +.++|++||||||||++|+|.++|++|+
T Consensus 10 ~~~~L~n~~-l~~~i~~~GA~l~s~~~~~~~g~~~~vvlg~~-~~~~y~~~-~~~~Ga~lgp~anRI~~g~~~~~G~~y~ 86 (337)
T PLN00194 10 GIYELKNGN-ISVKLTNYGATITSLILPDKNGKLADVVLGFD-SVEPYKND-SPYFGAIVGRVANRIKGAKFTLNGVTYK 86 (337)
T ss_pred EEEEEEeCC-EEEEEECCCcEEEEEEeECCCCCEeeeEECCC-CHHHHhhC-CCccCCeeCCCCCceeCCEEEECCEEEE
Confidence 357899988 77766676666543 33 67999998 68889874 6799999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCcceeEEEEEecC---CEEEEEEEcCCCCCCCCeEEEEEEEEEEecCCeEEEEEEEEe-CCcee
Q psy5515 549 IERNDGVNSIHGGARGFDKVLWLPVVTNS---DSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATT-DKKTP 624 (644)
Q Consensus 549 L~~Neg~n~LHGg~~g~~~~~W~v~~~~~---~sVtls~~~~d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atn-d~~tP 624 (644)
|++|+++|+|||+..||+.+.|+++..++ ++|+|++.+++++.||||+++++|+|+|+++++|+|+++++| +++||
T Consensus 87 l~~N~~~~~lHGg~~G~~~~~w~v~~~~~~~~~~v~~~l~~~~~~~gyP~~~~~~v~Y~L~~~~~L~i~~~~~n~~~~~p 166 (337)
T PLN00194 87 LPPNNGPNSLHGGPKGFSKVVWEVAKYKKGEKPSITFKYHSFDGEEGFPGDLSVTVTYTLLSSNTLRLDMEAKPLNKATP 166 (337)
T ss_pred eccCCCCcccCCCCcccCceEEeEEEeccCCCcEEEEEEECCCcCCCCCEEEEEEEEEEECCCCeEEEEEEEEECCCCeE
Confidence 99999999999999999999999987654 799999999888899999999999999986579999999999 99999
Q ss_pred eeeccccceeCCCC
Q psy5515 625 ISLTNHAYFNLAGH 638 (644)
Q Consensus 625 ~nlg~HpYFnL~G~ 638 (644)
||+||||||||+|.
T Consensus 167 ~~~g~HpYFnL~~~ 180 (337)
T PLN00194 167 VNLAQHTYWNLAGH 180 (337)
T ss_pred EEccccceEEcCCC
Confidence 99999999999985
No 15
>PTZ00485 aldolase 1-epimerase; Provisional
Probab=99.98 E-value=5.4e-32 Score=291.60 Aligned_cols=160 Identities=32% Similarity=0.522 Sum_probs=140.8
Q ss_pred EEEeeccceEEEEEcCCcceeEee---------eeecccCcccCcccccCCCCCCCCCeEeccccccCCCeeEECCEEEE
Q psy5515 478 DIQLTRDITLQVTDIQLTHDITLQ---------VTDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYH 548 (644)
Q Consensus 478 ~IqLtng~~lav~~~~gGa~l~~~---------~~dvv~G~di~~~eY~~~~~~~~GaiLgP~aNRI~~G~f~~dG~~Y~ 548 (644)
.+.|+|++ ++|.+...||.+.+. ++|||+|++-++++|+. ++.|+|++||||||||++|+|+++|++|+
T Consensus 15 ~~~L~N~~-~~v~i~n~GA~i~si~v~~~~~g~~~dvvLG~d~~~~~Y~~-~~~y~Ga~iGr~AnRI~~G~f~ldG~~Yq 92 (376)
T PTZ00485 15 LVWLETDR-LKVGLTNYAASVASIQVYHPADNKWIEVNCGYPKNPEEAYA-DPDYMGATVGRCAGRVAGGVFTLDGVKYY 92 (376)
T ss_pred EEEEEeCC-EEEEEECcCcEEEEEEEEcCCCCcEEeEEECCCCCHHHHhh-CCCccCcEeCCCCCeEECCEEEECCEEEE
Confidence 57899999 999988888886542 24699999613899986 57899999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCcceeEEEEEe---cCCEEEEEEEcCCCCCCCCeEEEEEEEEEEe--cCCeEEEEEEE-----E
Q psy5515 549 IERNDGVNSIHGGARGFDKVLWLPVVT---NSDSVTMSYTSPDGESGFPGTVHVTVMFTLT--LDNRLIIKYNA-----T 618 (644)
Q Consensus 549 L~~Neg~n~LHGg~~g~~~~~W~v~~~---~~~sVtls~~~~d~~~GyPg~~~v~vtYtL~--~~~~L~I~~~a-----t 618 (644)
|++|++.|+||||..||+++.|++... +..+|+|++.++++++||||+++++|+|+|+ ++++|+|+|++ +
T Consensus 93 L~~Neg~n~LHGG~~gf~~~~W~v~~~~~~~~~~V~f~~~~~dg~~GfPG~l~v~vtYtL~~~~~~~L~i~y~a~~~~n~ 172 (376)
T PTZ00485 93 TQKNRGENTCHCGDDAYHKKHWGMKLIETANVIGVRFNYTSPHMENGFPGELVSKVTYSIERSKPNVLKTIYDSYIPETS 172 (376)
T ss_pred ccCCCCCcccCCCCCccceeeeeEEEeccCCCcEEEEEEECCCcCCCCCEEEEEEEEEEEecCCCCEEEEEEEEEecccc
Confidence 999999999999999999999998542 2348999999999999999999999999996 35899999888 5
Q ss_pred eCCceeeeeccccceeCCCCC
Q psy5515 619 TDKKTPISLTNHAYFNLAGHP 639 (644)
Q Consensus 619 nd~~tP~nlg~HpYFnL~G~~ 639 (644)
++++||+|+||||||||+|.+
T Consensus 173 ~d~~Tp~nltnH~YFNL~g~~ 193 (376)
T PTZ00485 173 PADATPVNIFNHAYWNLNGIP 193 (376)
T ss_pred CCccceeeeccceeEEcCCCc
Confidence 589999999999999999853
No 16
>cd09019 galactose_mutarotase_like galactose mutarotase_like. Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.
Probab=99.97 E-value=1.7e-31 Score=282.69 Aligned_cols=159 Identities=53% Similarity=0.860 Sum_probs=142.1
Q ss_pred EEeeccceEEEEEcCCcceeEe-ee-------eecccCcccCcccccCCCCCCCCCeEeccccccCCCeeEECCEEEEec
Q psy5515 479 IQLTRDITLQVTDIQLTHDITL-QV-------TDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIE 550 (644)
Q Consensus 479 IqLtng~~lav~~~~gGa~l~~-~~-------~dvv~G~di~~~eY~~~~~~~~GaiLgP~aNRI~~G~f~~dG~~Y~L~ 550 (644)
|+|+|++.++|++...||.+.+ .+ ++++.+++ +.++|.. +++++|++|+||||||++|+|.++|++|+|+
T Consensus 2 ~~l~n~~~~~~~i~~~GA~l~~l~~~~~~g~~~~~v~~~~-~~~~~~~-~~~~~g~~lgp~anRi~~g~~~~~G~~y~l~ 79 (326)
T cd09019 2 YTLTNGNGLRVSILNYGATIQSLKVPDKNGKLRDVVLGFD-DLEDYLK-NSPYFGATVGRVANRIANGRFTLDGKTYQLE 79 (326)
T ss_pred EEEECCCCcEEEEECcCcEEEEEEEECCCCCEeeeEECCC-CHHHHhh-CCCccCCcccCcCCeecCCEEEECCEEEEcc
Confidence 6789994477777777777543 33 56889997 6888876 4689999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcceeEEEEEecCCEEEEEEEcCCCCCCCCeEEEEEEEEEEecCCeEEEEEEEEeCCceeeeeccc
Q psy5515 551 RNDGVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNH 630 (644)
Q Consensus 551 ~Neg~n~LHGg~~g~~~~~W~v~~~~~~sVtls~~~~d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atnd~~tP~nlg~H 630 (644)
+|+++|+|||+..||+++.|+++..++++|+|++.++++++||||+|+++|+|+|+++++|+|+|+++|+++|||++|+|
T Consensus 80 ~Ne~~~~LHGg~~G~~~~~w~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~L~i~~~~~~~~~~p~~~g~H 159 (326)
T cd09019 80 ANEGPNHLHGGPKGFDKRVWDVEEVEENSVTFSLVSPDGEEGFPGNLTVTVTYTLTDDNELTIEYEATTDKPTPVNLTNH 159 (326)
T ss_pred CCCCCcccCCCCccccCcEEeEEeccCCEEEEEEECCcccCCCCeEEEEEEEEEECCCCEEEEEEEEEeCCCeEecccce
Confidence 99999999999999999999999888899999999988889999999999999999658999999999999999999999
Q ss_pred cceeCCCCC
Q psy5515 631 AYFNLAGHP 639 (644)
Q Consensus 631 pYFnL~G~~ 639 (644)
|||||++.+
T Consensus 160 pyFnl~~~~ 168 (326)
T cd09019 160 SYFNLAGEG 168 (326)
T ss_pred eeEecCCCC
Confidence 999999864
No 17
>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism]
Probab=99.96 E-value=5.4e-29 Score=262.48 Aligned_cols=158 Identities=39% Similarity=0.649 Sum_probs=133.0
Q ss_pred EEEEeeccceEEEEEcCCcceeE-eee--eecccCcccCcccccCCCCCCCCCeEeccccccCCCeeEECCEEEEecCCC
Q psy5515 477 TDIQLTRDITLQVTDIQLTHDIT-LQV--TDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERND 553 (644)
Q Consensus 477 t~IqLtng~~lav~~~~gGa~l~-~~~--~dvv~G~di~~~eY~~~~~~~~GaiLgP~aNRI~~G~f~~dG~~Y~L~~Ne 553 (644)
..+++.++..+.+++...||.+. ++. ++++.+++ +.++|.+. +.|+|++|+||||||++|+|+++|++|+|++|+
T Consensus 13 ~~i~~~~~~~~~~~~~~~GA~l~~l~~~~~~v~l~~~-~~~~~~~~-~~~~ga~l~p~anRI~~g~f~~~G~~y~L~~N~ 90 (308)
T COG2017 13 RLLTLGNGGGMVVTVPDWGATLTSLRVNGRNLLLGFD-DAESYPAT-RGYGGAILGPYANRISNGRFTLDGKTYQLPPNE 90 (308)
T ss_pred EEEEEeCCCeEEEEEccCCcEEEEEEECCceEEeecC-CHHHhccc-cccccceecCccCcccCCEEEECCEEEEeCCCC
Confidence 35788888877777777666654 333 57888887 57888863 457899999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcceeEEEEEecCCEEEEEEEcCCCCCCCCeEEEEEEEEEEecCCeEEEEEEEEeCC--ceeeeecccc
Q psy5515 554 GVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDK--KTPISLTNHA 631 (644)
Q Consensus 554 g~n~LHGg~~g~~~~~W~v~~~~~~sVtls~~~~d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atnd~--~tP~nlg~Hp 631 (644)
++|++||+.++++.+.|+....++. +|++.++++++||||+|+++|+|+|+++ .|+|+|+++|++ +||||+|+||
T Consensus 91 ~~~~lHG~~~~~~~~v~~~~~~~~~--~~~l~~~~~~~gyP~~l~~~vtY~L~~~-~L~v~~~~~n~~~~~~p~~~g~Hp 167 (308)
T COG2017 91 GGNALHGGARDFDWQVWEAEEDDNA--EFSLVLRDGEDGYPGNLEATVTYTLNED-GLTVTYEVTNDGDEPTPFNLGNHP 167 (308)
T ss_pred CCccccCCccCCCeeEEEEEeccCC--EEEEEecccCCCCCceEEEEEEEEEcCC-CEEEEEEEEeCCCCcceecccccc
Confidence 9999999999977666766554333 7888888888999999999999999975 599999999965 9999999999
Q ss_pred ceeCCCCC
Q psy5515 632 YFNLAGHP 639 (644)
Q Consensus 632 YFnL~G~~ 639 (644)
||||++..
T Consensus 168 YFnl~~~~ 175 (308)
T COG2017 168 YFNLPGDG 175 (308)
T ss_pred eEecCCCC
Confidence 99999754
No 18
>PRK15172 putative aldose-1-epimerase; Provisional
Probab=99.96 E-value=1.2e-28 Score=258.68 Aligned_cols=152 Identities=20% Similarity=0.310 Sum_probs=128.5
Q ss_pred EEEeeccceEEEEEcCCcceeEe-ee--eecccCcccCcccccCCCCCCCCCeEeccccccCCCeeEECCEEEEecCCC-
Q psy5515 478 DIQLTRDITLQVTDIQLTHDITL-QV--TDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERND- 553 (644)
Q Consensus 478 ~IqLtng~~lav~~~~gGa~l~~-~~--~dvv~G~di~~~eY~~~~~~~~GaiLgP~aNRI~~G~f~~dG~~Y~L~~Ne- 553 (644)
.++|+|++ ++|++...||.+.. .+ ++++.+++ .++| ++.++|++|+||||||++|+|.++|++|+|++|+
T Consensus 12 ~~~l~~~~-~~v~i~~~Ga~i~~l~~~~~~vv~~~~--~~~~---~~~~~g~~L~P~anRI~~g~f~~~G~~y~L~~N~~ 85 (300)
T PRK15172 12 TISLAAGD-YQATIVTVGAGLAELTFQGRHLVIPHK--PEEM---PLAHLGKVLIPWPNRIANGCYRYQGQEYQLPINEH 85 (300)
T ss_pred EEEEeCCC-EEEEEecCCcEEEEEEECCEEEEecCC--cccc---CccccccEecccCCeecCCEEEECCEEEECCCCCC
Confidence 48899999 55555566666543 33 47888886 4555 3568999999999999999999999999999997
Q ss_pred -CCCCCCCCCCCCcceeEEEEEecCCEEEEEEEcCCCCCCCCeEEEEEEEEEEecCCeEEEEEEEEe--CCceeeeeccc
Q psy5515 554 -GVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATT--DKKTPISLTNH 630 (644)
Q Consensus 554 -g~n~LHGg~~g~~~~~W~v~~~~~~sVtls~~~~d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atn--d~~tP~nlg~H 630 (644)
++|+|||+.+ .+.|+|.+.++++|+|++.+++ ..+|||+|+++++|+|+++++|+|+++++| +++||+++|||
T Consensus 86 ~~~~~lHG~~~---~~~W~v~~~~~~~v~l~~~~~~-~~gyP~~~~~~v~y~L~~~~~L~i~~~~~n~~~~~~P~~~g~H 161 (300)
T PRK15172 86 VSKAAIHGLLA---WRDWQISELTATSVTLTAFLPP-SYGYPFMLASQVIYSLDAATGLSVEIASQNIGDVPAPYGVGIH 161 (300)
T ss_pred CCCcccCCCcc---CceEEEEEecCCEEEEEEEcCC-CCCCCEEEEEEEEEEEccCCeEEEEEEEEECCCCceeeEEecC
Confidence 5899999954 5999998888889999999875 579999999999999985579999999998 89999999999
Q ss_pred cceeCCCCC
Q psy5515 631 AYFNLAGHP 639 (644)
Q Consensus 631 pYFnL~G~~ 639 (644)
|||||++.+
T Consensus 162 pYFnl~~~~ 170 (300)
T PRK15172 162 PYLTCNLTS 170 (300)
T ss_pred ceEecCCCC
Confidence 999998633
No 19
>cd01081 Aldose_epim aldose 1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism; they catalyze the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=99.96 E-value=2.6e-27 Score=241.64 Aligned_cols=229 Identities=25% Similarity=0.306 Sum_probs=184.3
Q ss_pred EEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceeccccccccccccccCCCCCC
Q psy5515 115 QVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPY 194 (644)
Q Consensus 115 ~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 194 (644)
+++|.++||.|.+|+.++ ..|+|++++. ...|......+
T Consensus 2 ~~~i~~~Ga~i~~~~~~~----~~~~l~~~~~-------------------------------------~~~~~~~~~~~ 40 (284)
T cd01081 2 VAVIAPRGANIISLKVKG----DVDLLWGYPD-------------------------------------AEEYPLAPTGG 40 (284)
T ss_pred EEEEeCcCcEEEEEEcCC----CceEEecCCC-------------------------------------hhhhcccCCCC
Confidence 688999999999999865 2699999877 44453345678
Q ss_pred ccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEE--e--------------C-
Q psy5515 195 MGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRI--Q--------------N- 257 (644)
Q Consensus 195 ~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~--~--------------~- 257 (644)
.|++++|+||||++|.|.++|+.|.+..|.+ ++++||+...+ .++. . +
T Consensus 41 ~~~~l~P~~gri~~g~~~~~g~~~~~~~~~~--------------~~~lHG~~~~~-~w~v~~~~~~~~~v~l~~~~~~~ 105 (284)
T cd01081 41 GGAILFPFANRISDGRYTFDGKQYPLNEDEG--------------GNAIHGFVRNL-PWRVVATDEEEASVTLSYDLNDG 105 (284)
T ss_pred cceEecCcCCcccCCEEeECCEEecCCCCCC--------------CccccCCeecC-cEEEEEeccCCcEEEEEEEeCCC
Confidence 8999999999999999999999998877765 79999995432 2221 0 0
Q ss_pred -----c------EEEEeCcEEEEEEc--------ccccc-CCCCCceeecCCCCccccCcEEEEecceEEEeCCCCCCcc
Q psy5515 258 -----G------SFTIDGKEYHIERN--------DGVNA-IHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTG 317 (644)
Q Consensus 258 -----g------ty~L~~n~L~I~~~--------TpvNl-nHpg~~YFNLg~~~~~I~dH~L~I~A~~~~~~D~~~IPTG 317 (644)
+ +|+|.+++|+|+++ +|+++ +|| |||++.. . +.+++|+++++.++++|+..+|+|
T Consensus 106 ~~~~P~~~~l~~ty~L~~~~L~i~~~v~N~~~~~~p~~~g~Hp---yF~~~~~-~-~~~~~l~~~~~~~~~~~~~~~~~~ 180 (284)
T cd01081 106 PGGYPFPLELTVTYTLDADTLTITFTVTNLGDEPMPFGLGWHP---YFGLPGV-A-IEDLRLRVPASKVLPLDDLLPPTG 180 (284)
T ss_pred CCCCCEEEEEEEEEEEeCCeEEEEEEEEeCCCCCcceeeecCc---eEecCCC-c-ccceEEEecCCEEEecCCccCCCC
Confidence 1 88888899999998 79999 999 9999532 1 789999999999999999999999
Q ss_pred ceeccCCCCCCCCCCcccchhhcccCCCCceeeEEcCCCCcccccccccccCCCCCccchhhhhhhcccccccCCCCcce
Q psy5515 318 EIRSVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSR 397 (644)
Q Consensus 318 ~i~~V~gt~fDFr~p~~Lg~~l~~~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~~~~~l~~~~~~~~~~~~ 397 (644)
+..++. .+||+.++.+.+. ++|++|++..... .+
T Consensus 181 ~~~~~~--~~~~~~~~~~~~~-------~~D~~~~~~~~~~-------------------------------------~~ 214 (284)
T cd01081 181 ELEVPG--EEDFRLGRPLGGG-------ELDDCFLLLGNDA-------------------------------------GT 214 (284)
T ss_pred ccCCcc--cccccCCcCcCCc-------ccccccccCcCCC-------------------------------------Ce
Confidence 877654 7899988887654 7999999654210 03
Q ss_pred eEEEEEeCCCCeEEEEEeCCCEEEEEeCCCCCcccCCCCcccCCcCeEEeeccc-CCCCcCCCCCC
Q psy5515 398 SFFRVVHPKSGRVLNVYTDQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQK-YPDAVHHCYYR 462 (644)
Q Consensus 398 ~~a~l~~p~sg~~L~v~Td~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~-~pda~n~~~~~ 462 (644)
..++|.+|.+++.|++.+++|.+|+||++. ..+.+||||||. +|||.+++.++
T Consensus 215 ~~~~l~~~~~~~~l~~~~~~~~~~v~t~~~------------~~~~~~ciEP~t~~~da~~~~~~~ 268 (284)
T cd01081 215 AEARLEDPDSRISVEFETGWPFWQVYTGDG------------GRRGSVAIEPMTSAPDAFFNNNGG 268 (284)
T ss_pred eEEEEECCCCeEEEEEeCCCCEEEEECCCC------------CcCCEEEEccccCCCCCCCCCCCc
Confidence 478999999999999999999999999873 235899999996 68998766654
No 20
>cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB. Proteins similar to Escherichia coli YphB are uncharacterized members of the aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=99.96 E-value=1.4e-27 Score=246.11 Aligned_cols=233 Identities=18% Similarity=0.190 Sum_probs=182.5
Q ss_pred EEEE-cCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceeccccccccccccccCCCCCC
Q psy5515 116 VQII-TYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITLQGYRHPANPY 194 (644)
Q Consensus 116 v~i~-~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 194 (644)
++++ .+||.|++|...+ +..+++...+. +.. ....
T Consensus 2 ~~~v~~~Ga~l~sl~~~~---~~~~~l~~~~~--------------------------------------~~~---~~~~ 37 (273)
T cd09021 2 LVLAPELGGSIAALTSRG---DPTPLLRPADP--------------------------------------DAA---DALA 37 (273)
T ss_pred ceeCCCCCceEEEEEeCC---CcceeeecCCc--------------------------------------ccc---Cccc
Confidence 4555 4899999999854 23588875543 111 1123
Q ss_pred cc-ceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEEe--------------C--
Q psy5515 195 MG-ATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQ--------------N-- 257 (644)
Q Consensus 195 ~g-a~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~~--------------~-- 257 (644)
.| .+|+||||||++|+|.++|+.|+|+.|++ .++|++||+... -.+.+. +
T Consensus 38 ~~~p~LfP~~gRi~~~~~~~~g~~y~l~~n~~------------~~~~~~HG~ar~-~~w~v~~~~~~~v~l~l~~~~~~ 104 (273)
T cd09021 38 MACFPLVPFSNRIRGGRFLFAGREVALPPNTA------------DEPHPLHGDGWR-RPWQVVAASADSAELQLDHEADD 104 (273)
T ss_pred ccCceEeccCCcccCCcEeECCEEEecCCCCC------------CCccCcccchhc-CceEEEeccCCeEEEEEecCCCC
Confidence 44 89999999999999999999999999974 237999999432 122220 0
Q ss_pred --c------EEEEeCcEEEEEEc--------ccccc-CCCCCceeecCCCCccccCcEEEEecceEEEeCCCCCCcccee
Q psy5515 258 --G------SFTIDGKEYHIERN--------DGVNA-IHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIR 320 (644)
Q Consensus 258 --g------ty~L~~n~L~I~~~--------TpvNl-nHpg~~YFNLg~~~~~I~dH~L~I~A~~~~~~D~~~IPTG~i~ 320 (644)
+ +|+|++++|+|+|+ +|+++ +|| ||+++ .+++|+++++.++++|++.||+|...
T Consensus 105 ~P~~~~~~~~y~L~~~~L~i~~~~~N~~~~~~~~~~g~H~---YF~~~------~~~~l~v~~~~~~~~d~~~lp~~~~~ 175 (273)
T cd09021 105 PPWAYRAEQRFHLAGDGLSITLSVTNRGDRPMPAGLGFHP---YFPRT------PDTRLQADADGVWLEDEDHLPTGLRP 175 (273)
T ss_pred CCEeEEEEEEEEEcCCCEEEEEEEEECCCCCceeeeecCc---cEecC------CCCEEEEecceEEecCCCcCCCcccC
Confidence 1 88888888999987 79999 999 99996 38999999999999999999999766
Q ss_pred ccCCCCCCCCCCcccchhhcccCCCCceeeEEcCCCCcccccccccccCCCCCccchhhhhhhcccccccCCCCcceeEE
Q psy5515 321 SVNGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFF 400 (644)
Q Consensus 321 ~V~gt~fDFr~p~~Lg~~l~~~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~~~~~l~~~~~~~~~~~~~~a 400 (644)
.++ .+||+.++.+++. ++|++|.... ..+
T Consensus 176 ~~~--~~df~~~~~l~~~-------~~D~~f~~~~------------------------------------------~~~ 204 (273)
T cd09021 176 HPP--DWDFSQPRPLPDR-------WIDNCFTGWD------------------------------------------GAA 204 (273)
T ss_pred CCc--chhhcCCCcCCcc-------cccccccCCC------------------------------------------cce
Confidence 543 4899999888765 8999998422 136
Q ss_pred EEEeCCCCeEEEEEeCC--CEEEEEeCCCCCcccCCCCcccCCcCeEEeeccc-CCCCcCCCCCCceeeeecCceeEEEE
Q psy5515 401 RVVHPKSGRVLNVYTDQ--PGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQK-YPDAVHHCYYRVTDTQLTRDITLQVT 477 (644)
Q Consensus 401 ~l~~p~sg~~L~v~Td~--p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq~-~pda~n~~~~~~~~~~L~~ditl~vt 477 (644)
.+.++.+|+.|+|.++. |++||||+++ +.+||||||. +|||+|+++++....+-.|+.+...+
T Consensus 205 ~l~~~~~~~~i~v~~~~~~~~~vvwtp~~--------------~~~vCvEP~~~~~da~~~~~~~~~~~L~pge~~~~~~ 270 (273)
T cd09021 205 LIWPPERGLALTIEADAPFSHLVVYRPPG--------------EDFFCLEPVSHAPDAHHGPGDPGLRVLAPGESLSLSM 270 (273)
T ss_pred EEecCCCCcEEEEecCCCCCEEEEEcCCC--------------CCeEEEccccCCCCccCCcCCCCcEEeCCCCcEEEEE
Confidence 78889999999999998 9999999862 5899999995 99999999888766655588877766
Q ss_pred EE
Q psy5515 478 DI 479 (644)
Q Consensus 478 ~I 479 (644)
.|
T Consensus 271 ~i 272 (273)
T cd09021 271 RI 272 (273)
T ss_pred EE
Confidence 54
No 21
>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR. Proteins similar to Escherichia coli YihR are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=99.93 E-value=1.4e-25 Score=232.76 Aligned_cols=140 Identities=26% Similarity=0.389 Sum_probs=116.8
Q ss_pred EEEcCCcceeEe-ee--eecccCcccCcccccCCCCCCCCCeEeccccccCCCeeEECCEEEEecCCC--CCCCCCCCCC
Q psy5515 489 VTDIQLTHDITL-QV--TDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERND--GVNSIHGGAR 563 (644)
Q Consensus 489 v~~~~gGa~l~~-~~--~dvv~G~di~~~eY~~~~~~~~GaiLgP~aNRI~~G~f~~dG~~Y~L~~Ne--g~n~LHGg~~ 563 (644)
|++...||.+.+ .+ +|++.|++ +.+ + ++.++|++||||||||++|+|.++|++|+|++|+ ++|++||+.+
T Consensus 3 v~i~~~Ga~l~~~~~~g~~il~~~~-~~~-~---~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~~N~~~~~~~~HG~~~ 77 (284)
T cd09022 3 AVVTEVGAGLRSLTVGGRDLVEPYP-ADE-V---PPGAAGQVLAPWPNRIADGRYTFDGVEHQLPITEPERGNAIHGLVR 77 (284)
T ss_pred EEEEecCcEEEEEEECCEEEEecCC-Ccc-C---CccccccEEeeeCCcccCCEEEECCEEEEccCcCCCCCCCCcCCee
Confidence 444455555433 32 35666665 232 3 2568999999999999999999999999999997 5899999986
Q ss_pred CCcceeEEEEEecCCEEEEEEEcCCCCCCCCeEEEEEEEEEEecCCeEEEEEEEEe--CCceeeeeccccceeCCCC
Q psy5515 564 GFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATT--DKKTPISLTNHAYFNLAGH 638 (644)
Q Consensus 564 g~~~~~W~v~~~~~~sVtls~~~~d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atn--d~~tP~nlg~HpYFnL~G~ 638 (644)
. +.|+++..++++|+|++.++ .+++|||+++++++|+|++ +.|+|+++++| +++|||++|+||||||+|.
T Consensus 78 ~---~~w~v~~~~~~~v~l~l~~~-~~~~yP~~~~~~~~y~L~~-~~L~i~~~v~N~~~~~~p~~~g~HpyF~l~~~ 149 (284)
T cd09022 78 W---ADWQLVEHTDSSVTLRTRIP-PQPGYPFTLELTVTYELDD-DGLTVTLTATNVGDEPAPFGVGFHPYLSAGGA 149 (284)
T ss_pred c---ceEEEeeccCCeEEEEEEeC-CccCCCceEEEEEEEEEcC-CcEEEEEEEEeCCCCCeEeeeEecceEecCCC
Confidence 4 89999888888999999886 5689999999999999996 78999999998 7899999999999999875
No 22
>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5.1.3.3 from EC) (mutarotase) is the enzyme responsible for the anomeric interconversion of D-glucose and other aldoses between their alpha- and beta-forms. The sequence of mutarotase from two bacteria, Acinetobacter calcoaceticus and Streptococcus thermophilus is available []. It has also been shown that, on the basis of extensive sequence similarities, a mutarotase domain seems to be present in the C-terminal half of the fungal GAL10 protein which encodes, in the N-terminal part, UDP-glucose 4-epimerase.; GO: 0016853 isomerase activity, 0005975 carbohydrate metabolic process; PDB: 1YGA_A 3DCD_A 2CIQ_A 2CIS_A 2CIR_A 2HTB_C 2HTA_B 3Q1N_A 1NSZ_B 1NSR_B ....
Probab=99.92 E-value=2.4e-25 Score=230.10 Aligned_cols=154 Identities=36% Similarity=0.538 Sum_probs=125.9
Q ss_pred EEEeeccceEEEEEcCCcceeEe-ee----eecccCcccCcccccCCCCCCCCCeEeccccccCCCeeEECCEEEEecCC
Q psy5515 478 DIQLTRDITLQVTDIQLTHDITL-QV----TDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERN 552 (644)
Q Consensus 478 ~IqLtng~~lav~~~~gGa~l~~-~~----~dvv~G~di~~~eY~~~~~~~~GaiLgP~aNRI~~G~f~~dG~~Y~L~~N 552 (644)
.|+|+|+..+++++...||.+.+ .. ++++.+++ +.+.|.+ .+ ++|++|+|+||||++|+|+++|+.|+|+.|
T Consensus 2 ~itL~n~~~~~~~i~~~Ga~l~s~~~~~~~~~~l~~~~-~~~~~~~-~~-~~~~~l~p~~~Ri~~g~~~~~g~~~~l~~~ 78 (300)
T PF01263_consen 2 LITLENGNGLSAVIPEYGAELTSLQVKGNGREVLWQPD-PADAYWS-NS-FGGPILFPWPNRIRNGRFTFDGKPYCLPWN 78 (300)
T ss_dssp EEEEEETTSEEEEEETBTTEEEEEEETTTTEESB-B-S-THHHHHH-ST-CTTCEECSCSSEEGGGEEEETTEEEEBSSS
T ss_pred EEEEECCCceEEEEeccCcEEEEEEECCCCeEEecCCC-ChHHhcc-cc-cceeeeecccceEECCEEEECCEEEEeeec
Confidence 58999994466666666666543 33 23333343 2345544 23 779999999999999999999999999999
Q ss_pred C-CCCCCCCCCCCCcceeEEEEEecC-CEEEEEEEc-CCCCCCCCeEEEEEEEEEEecCCe-EEEEEEEEeC-Cceeeee
Q psy5515 553 D-GVNSIHGGARGFDKVLWLPVVTNS-DSVTMSYTS-PDGESGFPGTVHVTVMFTLTLDNR-LIIKYNATTD-KKTPISL 627 (644)
Q Consensus 553 e-g~n~LHGg~~g~~~~~W~v~~~~~-~sVtls~~~-~d~~~GyPg~~~v~vtYtL~~~~~-L~I~~~atnd-~~tP~nl 627 (644)
+ .++++||++++ +.|++++..+ ++++|++.+ .++.++|||+|+++++|+|++ ++ |+|+++++|. ++|||++
T Consensus 79 ~~~~~~~HG~~~~---~~w~v~~~~~~~~~~~~~~~~~~~~~~yP~~~~l~~~y~L~~-~~~L~i~~~v~n~~~~~p~~~ 154 (300)
T PF01263_consen 79 GPYPNPIHGFARN---KPWEVEEQSEDDSVSFTLVSDPDGEEGYPFDFRLRITYTLDE-NGKLTITYEVTNDGKPMPFNL 154 (300)
T ss_dssp BTTTBEETBSGGG---SB-EEEEEEETTEEEEEEEEEETTHHHSSSEEEEEEEEEEET-TEEEEEEEEEEESSSEEEEBE
T ss_pred cCCCcCCCCCccc---ccEEEEEecccceEEEEEEecCccceeeccceeeEEEEEECC-CCeEEEEEEEEecCccEEeec
Confidence 9 99999999987 8999999885 899999988 566678999999999999996 67 9999999998 9999999
Q ss_pred ccccceeCCCC
Q psy5515 628 TNHAYFNLAGH 638 (644)
Q Consensus 628 g~HpYFnL~G~ 638 (644)
|+|||||+++.
T Consensus 155 g~HpyF~l~~~ 165 (300)
T PF01263_consen 155 GFHPYFNLPGE 165 (300)
T ss_dssp EEEEEEETTCT
T ss_pred cccceEEcCCc
Confidence 99999999965
No 23
>cd01081 Aldose_epim aldose 1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism; they catalyze the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=99.89 E-value=2.2e-22 Score=205.32 Aligned_cols=145 Identities=35% Similarity=0.562 Sum_probs=116.0
Q ss_pred EEEcCCcceeEeee---eecccCcccCcccccCCCCCCCCCeEeccccccCCCeeEECCEEEEecCCCCCCCCCCCCCCC
Q psy5515 489 VTDIQLTHDITLQV---TDIQLTRDITLQGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVNSIHGGARGF 565 (644)
Q Consensus 489 v~~~~gGa~l~~~~---~dvv~G~di~~~eY~~~~~~~~GaiLgP~aNRI~~G~f~~dG~~Y~L~~Neg~n~LHGg~~g~ 565 (644)
+++..||.+.++++ +|++.+.+ ....|......+.|++|+||||||++|+|.++|+.|+++.|++.+.+||+++.
T Consensus 4 ~i~~~Ga~i~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~P~~gri~~g~~~~~g~~~~~~~~~~~~~lHG~~~~- 81 (284)
T cd01081 4 VIAPRGANIISLKVKGDVDLLWGYP-DAEEYPLAPTGGGGAILFPFANRISDGRYTFDGKQYPLNEDEGGNAIHGFVRN- 81 (284)
T ss_pred EEeCcCcEEEEEEcCCCceEEecCC-ChhhhcccCCCCcceEecCcCCcccCCEEeECCEEecCCCCCCCccccCCeec-
Confidence 34444444445444 24555554 23333221345678999999999999999999999999888889999999765
Q ss_pred cceeEEEEEec--CCEEEEEEEcCCCCCCCCeEEEEEEEEEEecCCeEEEEEEEEe--CCceeeeeccccceeCCCC
Q psy5515 566 DKVLWLPVVTN--SDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATT--DKKTPISLTNHAYFNLAGH 638 (644)
Q Consensus 566 ~~~~W~v~~~~--~~sVtls~~~~d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atn--d~~tP~nlg~HpYFnL~G~ 638 (644)
++|+++..+ +++|+|++.+.+...+|||+|+++++|+|.+ ++|+|+++++| +++|||++|+||||++++.
T Consensus 82 --~~w~v~~~~~~~~~v~l~~~~~~~~~~~P~~~~l~~ty~L~~-~~L~i~~~v~N~~~~~~p~~~g~HpyF~~~~~ 155 (284)
T cd01081 82 --LPWRVVATDEEEASVTLSYDLNDGPGGYPFPLELTVTYTLDA-DTLTITFTVTNLGDEPMPFGLGWHPYFGLPGV 155 (284)
T ss_pred --CcEEEEEeccCCcEEEEEEEeCCCCCCCCEEEEEEEEEEEeC-CeEEEEEEEEeCCCCCcceeeecCceEecCCC
Confidence 899998876 7899999998765558999999999999996 79999999998 7899999999999999874
No 24
>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX. Proteins similar to Lactococcus lactis lacX are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=99.89 E-value=4.6e-21 Score=199.78 Aligned_cols=259 Identities=15% Similarity=0.116 Sum_probs=170.9
Q ss_pred EEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceecccccccccc
Q psy5515 105 FTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITL 184 (644)
Q Consensus 105 ~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (644)
|+|+|+. ++++|..+||.|+||++++ +| .++|...+.
T Consensus 1 ~~l~n~~--~~a~v~~~Ga~l~s~~~~~-~g--~e~l~~~~~-------------------------------------- 37 (288)
T cd09024 1 ITLENEF--LTVTISEHGAELTSIKDKK-TG--REYLWQGDP-------------------------------------- 37 (288)
T ss_pred CEEECCc--EEEEEeccCcEEEEEEeCC-CC--CEEEeCCCh--------------------------------------
Confidence 5789987 8999999999999999974 24 578876543
Q ss_pred ccccCCCCCCccceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCC----c---cCCCCCccCcEEe-
Q psy5515 185 QGYRHPANPYMGATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANP----Y---MGATIGRVANRIQ- 256 (644)
Q Consensus 185 ~~y~~~~~~~~ga~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~----l---HGg~~grf~~~~~- 256 (644)
+.|. .-+++++|++|||++|+|+++|++|+|+.+ |......+++.... ... + ++...+ |.....
T Consensus 38 ~~~~-----~~~p~l~P~~gri~~g~~~~~g~~~~l~~H-Gf~r~~~w~v~~~~-~~~v~l~l~~~~~~~~~-~P~~~~~ 109 (288)
T cd09024 38 AYWG-----RHAPILFPIVGRLKDDTYTIDGKTYPMPQH-GFARDMEFEVVEQS-DDSVTFELTDNEETLKV-YPFDFEL 109 (288)
T ss_pred HHcC-----CCCCEEEeeccCCCCCeEEECCEEeeccCC-CCcccCceEEEEcc-CCEEEEEEccCcchhhc-CCeEEEE
Confidence 2231 124789999999999999999999999854 32222233321100 000 0 000011 211110
Q ss_pred CcEEEEeCcEEEEEEc--------ccccc-CCCCCceeecCC-CCccccCcEEEEec---ceEEEeCCCC-CCccceecc
Q psy5515 257 NGSFTIDGKEYHIERN--------DGVNA-IHGGARGFDKRS-GSRELVNHVVKLFS---DSYTEVDSQS-LPTGEIRSV 322 (644)
Q Consensus 257 ~gty~L~~n~L~I~~~--------TpvNl-nHpg~~YFNLg~-~~~~I~dH~L~I~A---~~~~~~D~~~-IPTG~i~~V 322 (644)
.=+|+|.+++|+|+++ +|+++ +|| |||++. ...++.+|.|++++ ..++++|++. +|++. .++
T Consensus 110 ~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~Hp---YF~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~ 185 (288)
T cd09024 110 RVTYTLEGNTLKVTYEVKNPDDKTMPFSIGGHP---AFNCPLDEGEKFEDYYLEFEPKEELERIPLVGPLGLLGEK-KPL 185 (288)
T ss_pred EEEEEEeCCEEEEEEEEEcCCCCceEEEEeCCc---eEECCCCCCCcccceEEEECCcccceEEecCCcccccccc-ccc
Confidence 1189999999999998 79999 999 999943 34578999999999 6889999887 88764 222
Q ss_pred CCCCCCCCCCcccchhhcccCCCCceeeEEcCCCCcccccccccccCCCCCccchhhhhhhcccccccCCCCcceeEEEE
Q psy5515 323 NGTAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRV 402 (644)
Q Consensus 323 ~gt~fDFr~p~~Lg~~l~~~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~~~~~l~~~~~~~~~~~~~~a~l 402 (644)
. ++.....+.+.+ -.|++|++.+.. ...++|
T Consensus 186 ~----~~~~~~~l~~~~------~~~~~~~~~~~~---------------------------------------~~~~~l 216 (288)
T cd09024 186 L----LNEGTLPLTHDL------FDDDALIFDNLK---------------------------------------SREVTL 216 (288)
T ss_pred c----CCCCeecCCHHH------hcCCEEEEcCCC---------------------------------------ccEEEE
Confidence 1 333322333321 236777765421 125788
Q ss_pred EeCCCCeEEEEEe-CCCEEEEEeCCCCCcccCCCCcccCCcCeEEeecc-cCCCCcCCCC-C---CceeeeecCceeEEE
Q psy5515 403 VHPKSGRVLNVYT-DQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQ-KYPDAVHHCY-Y---RVTDTQLTRDITLQV 476 (644)
Q Consensus 403 ~~p~sg~~L~v~T-d~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq-~~pda~n~~~-~---~~~~~~L~~ditl~v 476 (644)
.+|++|+.++|.. +.|.+||||+.. ....||+||+ .+|||+|... + .....+-.|+.....
T Consensus 217 ~~~~~~~~v~l~~~~~~~l~vwt~~~-------------~~~~iciEP~t~~~da~~~~~~~~~~~gl~~L~PGe~~~~~ 283 (288)
T cd09024 217 KSKKTGHGVTVDFDDFPYLGIWSKPN-------------GAPFVCIEPWYGLADSVGFDGDLEDKEGINKLEPGESFEAS 283 (288)
T ss_pred EcCCCCCEEEEEeCCCCEEEEeCCCC-------------CCCEEEEcCCCCCCCcCCCCccccccCCCEEeCCCCEEEEE
Confidence 8987666666653 479999999752 1479999999 6999998643 2 233333338877776
Q ss_pred EEEE
Q psy5515 477 TDIQ 480 (644)
Q Consensus 477 t~Iq 480 (644)
..|+
T Consensus 284 ~~i~ 287 (288)
T cd09024 284 YSIT 287 (288)
T ss_pred EEEE
Confidence 6655
No 25
>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX. Proteins similar to Lactococcus lactis lacX are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=99.88 E-value=4e-22 Score=207.74 Aligned_cols=141 Identities=29% Similarity=0.451 Sum_probs=114.6
Q ss_pred EEeeccceEEEEEcCCcceeE-eeeeecccCcccCcccccCC-CCCCCC---CeEeccccccCCCeeEECCEEEEecCCC
Q psy5515 479 IQLTRDITLQVTDIQLTHDIT-LQVTDIQLTRDITLQGYRHP-ANPYMG---ATIGRVANRIQNGSFTIDGKEYHIERND 553 (644)
Q Consensus 479 IqLtng~~lav~~~~gGa~l~-~~~~dvv~G~di~~~eY~~~-~~~~~G---aiLgP~aNRI~~G~f~~dG~~Y~L~~Ne 553 (644)
|.|+|++ +++++...||.+. ++..+ .|.+ |++. ++.+|+ ++|+||+|||++|+|+++|++|+|++
T Consensus 1 ~~l~n~~-~~a~v~~~Ga~l~s~~~~~--~g~e-----~l~~~~~~~~~~~~p~l~P~~gri~~g~~~~~g~~~~l~~-- 70 (288)
T cd09024 1 ITLENEF-LTVTISEHGAELTSIKDKK--TGRE-----YLWQGDPAYWGRHAPILFPIVGRLKDDTYTIDGKTYPMPQ-- 70 (288)
T ss_pred CEEECCc-EEEEEeccCcEEEEEEeCC--CCCE-----EEeCCChHHcCCCCCEEEeeccCCCCCeEEECCEEeeccC--
Confidence 4689999 5555556666654 34321 2444 4532 333444 89999999999999999999999996
Q ss_pred CCCCCCCCCCCCcceeEEEEEecCCEEEEEEEcCC-CCCCCCeEEEEEEEEEEecCCeEEEEEEEEe--CCceeeeeccc
Q psy5515 554 GVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPD-GESGFPGTVHVTVMFTLTLDNRLIIKYNATT--DKKTPISLTNH 630 (644)
Q Consensus 554 g~n~LHGg~~g~~~~~W~v~~~~~~sVtls~~~~d-~~~GyPg~~~v~vtYtL~~~~~L~I~~~atn--d~~tP~nlg~H 630 (644)
||+.+. +.|++.+.++++|+|++.+++ ..++|||+|+++++|+|++ ++|+++++++| +++|||++|+|
T Consensus 71 -----HGf~r~---~~w~v~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~-~~L~i~~~v~N~~~~~~p~~~g~H 141 (288)
T cd09024 71 -----HGFARD---MEFEVVEQSDDSVTFELTDNEETLKVYPFDFELRVTYTLEG-NTLKVTYEVKNPDDKTMPFSIGGH 141 (288)
T ss_pred -----CCCccc---CceEEEEccCCEEEEEEccCcchhhcCCeEEEEEEEEEEeC-CEEEEEEEEEcCCCCceEEEEeCC
Confidence 999875 799999888889999998874 3589999999999999995 89999999998 68999999999
Q ss_pred cceeCCCC
Q psy5515 631 AYFNLAGH 638 (644)
Q Consensus 631 pYFnL~G~ 638 (644)
|||++++.
T Consensus 142 pYF~~~~~ 149 (288)
T cd09024 142 PAFNCPLD 149 (288)
T ss_pred ceEECCCC
Confidence 99999864
No 26
>cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB. Proteins similar to Escherichia coli YphB are uncharacterized members of the aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=99.88 E-value=6.5e-22 Score=204.02 Aligned_cols=109 Identities=25% Similarity=0.398 Sum_probs=98.2
Q ss_pred CCC-CeEeccccccCCCeeEECCEEEEecCCC--CCCCCCCCCCCCcceeEEEEEecCCEEEEEEEcCCCCCCCCeEEEE
Q psy5515 523 YMG-ATIGRVANRIQNGSFTIDGKEYHIERND--GVNSIHGGARGFDKVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHV 599 (644)
Q Consensus 523 ~~G-aiLgP~aNRI~~G~f~~dG~~Y~L~~Ne--g~n~LHGg~~g~~~~~W~v~~~~~~sVtls~~~~d~~~GyPg~~~v 599 (644)
..| ++|+||||||++|+|.++|+.|+|++|+ +++++||+++. +.|+++..++++|+|++.+.+... ||+|++
T Consensus 37 ~~~~p~LfP~~gRi~~~~~~~~g~~y~l~~n~~~~~~~~HG~ar~---~~w~v~~~~~~~v~l~l~~~~~~~--P~~~~~ 111 (273)
T cd09021 37 AMACFPLVPFSNRIRGGRFLFAGREVALPPNTADEPHPLHGDGWR---RPWQVVAASADSAELQLDHEADDP--PWAYRA 111 (273)
T ss_pred cccCceEeccCCcccCCcEeECCEEEecCCCCCCCccCcccchhc---CceEEEeccCCeEEEEEecCCCCC--CEeEEE
Confidence 345 9999999999999999999999999997 78899999874 899998888889999998865433 999999
Q ss_pred EEEEEEecCCeEEEEEEEEe--CCceeeeeccccceeCCC
Q psy5515 600 TVMFTLTLDNRLIIKYNATT--DKKTPISLTNHAYFNLAG 637 (644)
Q Consensus 600 ~vtYtL~~~~~L~I~~~atn--d~~tP~nlg~HpYFnL~G 637 (644)
+++|+|++ ++|+|+++++| +++|||++|+||||++++
T Consensus 112 ~~~y~L~~-~~L~i~~~~~N~~~~~~~~~~g~H~YF~~~~ 150 (273)
T cd09021 112 EQRFHLAG-DGLSITLSVTNRGDRPMPAGLGFHPYFPRTP 150 (273)
T ss_pred EEEEEEcC-CCEEEEEEEEECCCCCceeeeecCccEecCC
Confidence 99999985 79999999998 789999999999999985
No 27
>cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438. Proteins similar to Synechocystis Slr1438 are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=99.84 E-value=2.4e-20 Score=193.01 Aligned_cols=145 Identities=19% Similarity=0.337 Sum_probs=111.3
Q ss_pred EEEeeccc--eEE-EEEcCCcceeEeeeeecccCccc---CcccccCCC-CCCCC-CeEeccccccCCCeeEECCEEEEe
Q psy5515 478 DIQLTRDI--TLQ-VTDIQLTHDITLQVTDIQLTRDI---TLQGYRHPA-NPYMG-ATIGRVANRIQNGSFTIDGKEYHI 549 (644)
Q Consensus 478 ~IqLtng~--~la-v~~~~gGa~l~~~~~dvv~G~di---~~~eY~~~~-~~~~G-aiLgP~aNRI~~G~f~~dG~~Y~L 549 (644)
.+.|+++. ... +.+..||.+++++. .|.++ +...+.... +...| ++|+|++|||++|+|.++|+.|+|
T Consensus 3 ~~~l~~~~~~~~~~v~p~~Ga~l~s~~~----~g~~~l~~~~~~~~~~~~~~~gG~p~l~P~~gri~~g~~~~~g~~~~l 78 (271)
T cd09025 3 TYELSDEEAGSRLRVVPERGGLITRWTV----QGRELLYLDEERFADPAKSVRGGIPILFPICGNLPDDGYPLAGQEYTL 78 (271)
T ss_pred EEEEEcCCCceEEEEecccCCEEEEEec----CCEEEEecCChHHhccccccCCCCcEEECccCCCCCCeEEECCEEEec
Confidence 36778887 544 44444555555543 34442 011111111 22234 799999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCcceeEEEEEec-CCEEEEEEEcCC-CCCCCCeEEEEEEEEEEecCCeEEEEEEEEe--CCceee
Q psy5515 550 ERNDGVNSIHGGARGFDKVLWLPVVTN-SDSVTMSYTSPD-GESGFPGTVHVTVMFTLTLDNRLIIKYNATT--DKKTPI 625 (644)
Q Consensus 550 ~~Neg~n~LHGg~~g~~~~~W~v~~~~-~~sVtls~~~~d-~~~GyPg~~~v~vtYtL~~~~~L~I~~~atn--d~~tP~ 625 (644)
++ ||+.+. +.|++.+.+ ..+|+|++.+++ ..++|||+|+++++|+|.+ ++|+++++++| +++|||
T Consensus 79 p~-------HGf~r~---~~W~v~~~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~-~~L~i~~~v~N~~~~~~p~ 147 (271)
T cd09025 79 KQ-------HGFARD---LPWEVELLGDGAGLTLTLRDNEATRAVYPFDFELELTYRLAG-NTLEIAQRVHNLGDQPMPF 147 (271)
T ss_pred cC-------cccccC---CCEEEEecCCCcEEEEEEeCCHHHHhhCCceEEEEEEEEEeC-CEEEEEEEEEECCCCcEEE
Confidence 97 999875 799998876 678999998764 5689999999999999985 79999999998 789999
Q ss_pred eeccccceeCCC
Q psy5515 626 SLTNHAYFNLAG 637 (644)
Q Consensus 626 nlg~HpYFnL~G 637 (644)
++|+||||++++
T Consensus 148 ~~g~HpYF~~~~ 159 (271)
T cd09025 148 SFGFHPYFAVPD 159 (271)
T ss_pred EEecCceeeCCc
Confidence 999999999986
No 28
>cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438. Proteins similar to Synechocystis Slr1438 are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=99.84 E-value=3.1e-19 Score=184.69 Aligned_cols=246 Identities=11% Similarity=0.130 Sum_probs=160.5
Q ss_pred EEEEEcCCceEEEEEEc-CCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceecccccccc
Q psy5515 104 RFTLTNHLLNTQVQIIT-YGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDI 182 (644)
Q Consensus 104 ~~tL~n~~~~~~v~i~~-~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (644)
.++|+++...++++|++ +||.|.+|... | .|++. .++
T Consensus 3 ~~~l~~~~~~~~~~v~p~~Ga~l~s~~~~---g--~~~l~-~~~------------------------------------ 40 (271)
T cd09025 3 TYELSDEEAGSRLRVVPERGGLITRWTVQ---G--RELLY-LDE------------------------------------ 40 (271)
T ss_pred EEEEEcCCCceEEEEecccCCEEEEEecC---C--EEEEe-cCC------------------------------------
Confidence 46788875448999996 89999999763 3 47775 333
Q ss_pred ccccccCCCCCCcc-ceEccccCcccCceEEECCEEEEeecCCCcccccccccccCCCCCCcc----C---CCCCccCcE
Q psy5515 183 TLQGYRHPANPYMG-ATIGRVANRIQNGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYM----G---ATIGRVANR 254 (644)
Q Consensus 183 ~~~~y~~~~~~~~g-a~lgr~anRI~~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lH----G---g~~grf~~~ 254 (644)
...+........| .+++|++|||++|+|.++|++|+|+.+ |......+++........+. . ...+ |...
T Consensus 41 -~~~~~~~~~~~gG~p~l~P~~gri~~g~~~~~g~~~~lp~H-Gf~r~~~W~v~~~~~~~~v~l~l~~~~~~~~~-~P~~ 117 (271)
T cd09025 41 -ERFADPAKSVRGGIPILFPICGNLPDDGYPLAGQEYTLKQH-GFARDLPWEVELLGDGAGLTLTLRDNEATRAV-YPFD 117 (271)
T ss_pred -hHHhccccccCCCCcEEECccCCCCCCeEEECCEEEeccCc-ccccCCCEEEEecCCCcEEEEEEeCCHHHHhh-CCce
Confidence 1111111122233 589999999999999999999999864 32223334443211011000 0 0001 1111
Q ss_pred Ee-CcEEEEeCcEEEEEEc--------ccccc-CCCCCceeecCCCCccccCcEEEEecceEEEeCCCCCCccceeccCC
Q psy5515 255 IQ-NGSFTIDGKEYHIERN--------DGVNA-IHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNG 324 (644)
Q Consensus 255 ~~-~gty~L~~n~L~I~~~--------TpvNl-nHpg~~YFNLg~~~~~I~dH~L~I~A~~~~~~D~~~IPTG~i~~V~g 324 (644)
.. .=+|+|++++|+|+++ +|+++ +|| ||++++ +.+..|++++..+++.+++.++ ++
T Consensus 118 ~~~~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~Hp---YF~~~~----~~~~~l~~~~~~~~~~~~~~~~-----~~-- 183 (271)
T cd09025 118 FELELTYRLAGNTLEIAQRVHNLGDQPMPFSFGFHP---YFAVPD----KAKLSLDLPPTRCFDQKTDEEA-----NT-- 183 (271)
T ss_pred EEEEEEEEEeCCEEEEEEEEEECCCCcEEEEEecCc---eeeCCc----hhccEEEcCHHHHhhhccCCcc-----CC--
Confidence 10 0189998899999987 89999 999 999952 4788999998888877755433 11
Q ss_pred CCCCCCCCcccchhhcccCCCCceeeEEcCCCCcccccccccccCCCCCccchhhhhhhcccccccCCCCcceeEEEEEe
Q psy5515 325 TAFDLRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVH 404 (644)
Q Consensus 325 t~fDFr~p~~Lg~~l~~~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~~~~~l~~~~~~~~~~~~~~a~l~~ 404 (644)
..+..+.+ .++|++|...+ .++|.+
T Consensus 184 -----~~~~~~~~-------~~~D~~y~~~~-------------------------------------------~~~l~~ 208 (271)
T cd09025 184 -----PGQFDETE-------EGVDLLFRPLG-------------------------------------------PASLTD 208 (271)
T ss_pred -----cccccccc-------cccchhhccCC-------------------------------------------ceEEEe
Confidence 11111211 26899998321 377889
Q ss_pred CCCCeEEEEEeCC--CEEEEEeCCCCCcccCCCCcccCCcCeEEeecc-cCCCCcCCCCCCceeeeecCceeEEEEEE
Q psy5515 405 PKSGRVLNVYTDQ--PGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQ-KYPDAVHHCYYRVTDTQLTRDITLQVTDI 479 (644)
Q Consensus 405 p~sg~~L~v~Td~--p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq-~~pda~n~~~~~~~~~~L~~ditl~vt~I 479 (644)
+.++++|.|.++. +.+|||++.+ ..+||+||+ ++|||+|+.. ....+..|+.......|
T Consensus 209 ~~~~~~i~l~~~~~~~~~vvw~p~~--------------~~~vCvEp~t~~~nA~n~~~--~~~~L~PGe~~~~~~~i 270 (271)
T cd09025 209 GARGLKITLDHDEPFSNLVVWTDKG--------------KDFVCLEPWTGPRNALNTGE--RLLLLPPGETEEASVRI 270 (271)
T ss_pred cCCCEEEEEecCCCcceEEEecCCC--------------CcEEEEecCCCCccccCcCC--ccEEECCCCEEEEEEEE
Confidence 9889999999885 6999999742 479999997 7999998764 33343448877665544
No 29
>cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like. D-Hexose-6-phosphate epimerase Ymr099c from Saccharomyces cerevisiae belongs to the large superfamily of aldose-1-epimerases. Its active site is very similar to the catalytic site of galactose mutarotase, the best studied member of the superfamily. It also contains the conserved glutamate and histidine residues that have been shown in galactose mutarotase to be critical for catalysis, the glutamate serving as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. In addition Ymr099c contains 2 conserved arginine residues which are involved in phosphate binding, and exhibits hexose-6-phosphate mutarotase activity on glucose-6-P, galactose-6-P and mannose-6-P.
Probab=99.63 E-value=2.4e-15 Score=155.94 Aligned_cols=136 Identities=18% Similarity=0.208 Sum_probs=95.5
Q ss_pred EEeeccceEEEEEcCCcceeEeeeeecccCccc----CcccccCCCCCCC-C-CeEeccccccCCCeeEECCEEEEecCC
Q psy5515 479 IQLTRDITLQVTDIQLTHDITLQVTDIQLTRDI----TLQGYRHPANPYM-G-ATIGRVANRIQNGSFTIDGKEYHIERN 552 (644)
Q Consensus 479 IqLtng~~lav~~~~gGa~l~~~~~dvv~G~di----~~~eY~~~~~~~~-G-aiLgP~aNRI~~G~f~~dG~~Y~L~~N 552 (644)
+.|+++...+.+...||.+++++.. .+.++ +.+.|.. ..+.. | ++|+||+||+++| |
T Consensus 2 i~i~~~~~~a~i~~~Ga~l~s~~~~---~~~~~L~~s~~~~~~~-~~~irgGiPvlfP~~g~~~~~--------~----- 64 (269)
T cd09020 2 IVLDHPGASAEIALQGAQVLSWKPK---GGQDLLWLSPQAPFDG-GKAIRGGIPVCWPWFGPHGPN--------A----- 64 (269)
T ss_pred EEEeCCCceEEEECCCcEEEEEeCC---CCceeEEECCccccCC-CCcccCCCeEeeeccCCCCCC--------C-----
Confidence 6788887444444444444554442 13443 1223332 22334 3 7999999999987 3
Q ss_pred CCCCCCCCCCCCCcceeEEEEEecC--CEEEEEEEcC---CCCCCCCeEEEEEEEEEEecCCeEEEEEEEEe--CCceee
Q psy5515 553 DGVNSIHGGARGFDKVLWLPVVTNS--DSVTMSYTSP---DGESGFPGTVHVTVMFTLTLDNRLIIKYNATT--DKKTPI 625 (644)
Q Consensus 553 eg~n~LHGg~~g~~~~~W~v~~~~~--~sVtls~~~~---d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atn--d~~tP~ 625 (644)
.+.+||+++. +.|+++..+. +++++++... +...+|||+|+++++|+|.+ ++|+++++++| +++|||
T Consensus 65 --~~~~HGfaR~---~~W~l~~~~~~~~~~~l~l~l~~~~~~~~~~P~~f~l~~~~~L~~-~~L~~~l~v~N~g~~~~p~ 138 (269)
T cd09020 65 --DLPAHGFART---RLWELLEVSEDEDGVTVSLELDDTDETRAIWPHAFELRLTVTLGF-DTLELELTVTNTGDKPFSF 138 (269)
T ss_pred --CCCcceeeec---CceEEeeeecCCCceEEEEEeCCChhhhhcCCCceEEEEEEEEcC-CcEEEEEEEECCCCCCeEe
Confidence 3456999986 8999987642 3444444432 23469999999999999985 79999999998 689999
Q ss_pred eeccccceeCCC
Q psy5515 626 SLTNHAYFNLAG 637 (644)
Q Consensus 626 nlg~HpYFnL~G 637 (644)
++|+||||+++.
T Consensus 139 ~~g~HpYf~v~d 150 (269)
T cd09020 139 TAALHTYFRVSD 150 (269)
T ss_pred hhccCeeEecCC
Confidence 999999999865
No 30
>cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like. D-Hexose-6-phosphate epimerase Ymr099c from Saccharomyces cerevisiae belongs to the large superfamily of aldose-1-epimerases. Its active site is very similar to the catalytic site of galactose mutarotase, the best studied member of the superfamily. It also contains the conserved glutamate and histidine residues that have been shown in galactose mutarotase to be critical for catalysis, the glutamate serving as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. In addition Ymr099c contains 2 conserved arginine residues which are involved in phosphate binding, and exhibits hexose-6-phosphate mutarotase activity on glucose-6-P, galactose-6-P and mannose-6-P.
Probab=98.90 E-value=2.4e-07 Score=96.47 Aligned_cols=249 Identities=12% Similarity=0.088 Sum_probs=127.3
Q ss_pred EEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEecCCCcccccccccccccccccccccccccceecccccccccc
Q psy5515 105 FTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVLGFDYLEDTQLTRDITLQVTDTQLTHDITLQVTDIQLTRDITL 184 (644)
Q Consensus 105 ~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (644)
++|+|+. .+++|..+||.|.+|..++ | .+++.- ++ .
T Consensus 2 i~i~~~~--~~a~i~~~Ga~l~s~~~~~--~--~~~L~~-s~-------------------------------------~ 37 (269)
T cd09020 2 IVLDHPG--ASAEIALQGAQVLSWKPKG--G--QDLLWL-SP-------------------------------------Q 37 (269)
T ss_pred EEEeCCC--ceEEEECCCcEEEEEeCCC--C--ceeEEE-CC-------------------------------------c
Confidence 5688885 8999999999999999864 2 467642 12 2
Q ss_pred ccccCCCCCCcc-ceEccccCcccCce-EEECC----EEEEeecCCCcccccccccccCCCCCCccCCCCCccCcEEeCc
Q psy5515 185 QGYRHPANPYMG-ATIGRVANRIQNGS-FTIDG----KEYHIERNDGVITDTQLTHDITHPANPYMGATIGRVANRIQNG 258 (644)
Q Consensus 185 ~~y~~~~~~~~g-a~lgr~anRI~~g~-f~~~G----~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~grf~~~~~~g 258 (644)
+.|....+...| .++.|+.||+++|. ...-| ..++|......-...++.+.....+...=+.... |.-+.
T Consensus 38 ~~~~~~~~irgGiPvlfP~~g~~~~~~~~~~HGfaR~~~W~l~~~~~~~~~~~l~l~l~~~~~~~~~~P~~-f~l~~--- 113 (269)
T cd09020 38 APFDGGKAIRGGIPVCWPWFGPHGPNADLPAHGFARTRLWELLEVSEDEDGVTVSLELDDTDETRAIWPHA-FELRL--- 113 (269)
T ss_pred cccCCCCcccCCCeEeeeccCCCCCCCCCCcceeeecCceEEeeeecCCCceEEEEEeCCChhhhhcCCCc-eEEEE---
Confidence 444222222333 67999999998761 11111 1122211000000011111100000000011001 11111
Q ss_pred EEEEeCcEEEEEEc--------ccccc-CCCCCceeecCCCCccccCcEEEEecc-eEEEeCCCCCCccceeccCCCCCC
Q psy5515 259 SFTIDGKEYHIERN--------DGVNA-IHGGARGFDKRSGSRELVNHVVKLFSD-SYTEVDSQSLPTGEIRSVNGTAFD 328 (644)
Q Consensus 259 ty~L~~n~L~I~~~--------TpvNl-nHpg~~YFNLg~~~~~I~dH~L~I~A~-~~~~~D~~~IPTG~i~~V~gt~fD 328 (644)
+|+|.+++|.++++ .|+++ .|| ||++++ +.+.+|...+. .|+.. ++ +........++.
T Consensus 114 ~~~L~~~~L~~~l~v~N~g~~~~p~~~g~Hp---Yf~v~d----~~~~~v~gl~~~~y~d~----~~-~~~~~~~~~~~~ 181 (269)
T cd09020 114 TVTLGFDTLELELTVTNTGDKPFSFTAALHT---YFRVSD----IEQVRVEGLEGATYLDK----LT-DQREKVQGGAVT 181 (269)
T ss_pred EEEEcCCcEEEEEEEECCCCCCeEehhccCe---eEecCC----ccccEEeCCCCCceEEc----CC-CccccccCCceE
Confidence 88888889999987 78999 999 999952 34555555443 45432 11 111111111222
Q ss_pred CCCCcccchhhcccCCCCceeeEEcCCCCcccccccccccCCCCCccchhhhhhhcccccccCCCCcceeEEEEEeCCCC
Q psy5515 329 LRLPKYLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSG 408 (644)
Q Consensus 329 Fr~p~~Lg~~l~~~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~~~~~l~~~~~~~~~~~~~~a~l~~p~sg 408 (644)
|. ..+|+.|.-.. ..++|.++..+
T Consensus 182 ~~--------------~~~Drvy~~~~------------------------------------------~~~~i~d~~~~ 205 (269)
T cd09020 182 FD--------------GEVDRVYLNTP------------------------------------------APLTIDDPAWG 205 (269)
T ss_pred EC--------------CccceEEeCCC------------------------------------------CCEEEEcCCCC
Confidence 21 25788886211 12567788888
Q ss_pred eEEEEEeC-CCEEEEEeCCCCCcccCC-CCcccCCcCeEEeecccCCCCcCCCCCCceeeeecCceeEEEEEE
Q psy5515 409 RVLNVYTD-QPGVQFYTGGNLRPIYGK-QYALYDQFGAFCLETQKYPDAVHHCYYRVTDTQLTRDITLQVTDI 479 (644)
Q Consensus 409 ~~L~v~Td-~p~v~vYT~n~l~~~~~~-~g~~y~~~~gicLEpq~~pda~n~~~~~~~~~~L~~ditl~vt~I 479 (644)
+.+.+..+ .+.++||++..- ..+.. +-....-...||+||.... ....+..|+.....+.|
T Consensus 206 ~~i~i~~~~~~~~VVWNP~~~-~~~~~~d~~~~~~~~fvCvEp~~~~---------~~~~L~pG~~~~~~~~i 268 (269)
T cd09020 206 RRIRIEKSGSPSAVVWNPWIE-KAARMADFPDDGYRRMVCVEAANVA---------DPVTLAPGESHTLSQTI 268 (269)
T ss_pred cEEEEEecCCCCEEEeCcchh-hccccccCCccccceEEEECeeecC---------CCEEECCCCCEEEEEEE
Confidence 88888764 578999997321 00000 0000112467999996431 22333337766655443
No 31
>cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013. Proteins, similar to Escherichia coli c4013, are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=98.44 E-value=1.1e-06 Score=92.20 Aligned_cols=79 Identities=18% Similarity=0.099 Sum_probs=65.2
Q ss_pred CCCCCCCCCCCCcceeEEEEEec-----CCEEEEEEEcCC-CCCCCCeEEEEEEEEEEecCCeEEEEEEEEe--CCceee
Q psy5515 554 GVNSIHGGARGFDKVLWLPVVTN-----SDSVTMSYTSPD-GESGFPGTVHVTVMFTLTLDNRLIIKYNATT--DKKTPI 625 (644)
Q Consensus 554 g~n~LHGg~~g~~~~~W~v~~~~-----~~sVtls~~~~d-~~~GyPg~~~v~vtYtL~~~~~L~I~~~atn--d~~tP~ 625 (644)
..|+|||.... .+|+++... ...|+++....+ ...||||.++.+|+|+|.+ ++|+|+++++| +++||+
T Consensus 69 ~~~~lHG~~~~---~p~~~~~~~~~~~~~~~v~l~~~~~~~~~~g~~~~l~~~i~~~l~~-~~l~i~~~VtN~g~~~~P~ 144 (284)
T cd09023 69 EEYPLHGRISN---TPAELVGVEEDEEGDYEIEVSGEVREAALFGENLRLERTIETDLGS-NEIRLEDRVTNEGFRPTPH 144 (284)
T ss_pred ccccCcccccC---CCcceEEEEeccCCCeEEEEEEEEEEeeeecCceEEEEEEEEecCC-ceEEEEEEEEeCCCCCCcc
Confidence 57899999875 899987653 234777776542 3578999999999999985 79999999999 689999
Q ss_pred eeccccceeCC
Q psy5515 626 SLTNHAYFNLA 636 (644)
Q Consensus 626 nlg~HpYFnL~ 636 (644)
++++||||..+
T Consensus 145 ~~~~H~n~~~p 155 (284)
T cd09023 145 MLLYHVNFGYP 155 (284)
T ss_pred eEEeeEEcCCc
Confidence 99999999764
No 32
>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]
Probab=98.43 E-value=1.2e-06 Score=91.06 Aligned_cols=130 Identities=13% Similarity=0.222 Sum_probs=90.9
Q ss_pred EEeeccceEEEEEcCCcceeEeeeeecccCccc----CcccccCCCCCCCC--CeEeccccccCCCeeEECCEEEEecCC
Q psy5515 479 IQLTRDITLQVTDIQLTHDITLQVTDIQLTRDI----TLQGYRHPANPYMG--ATIGRVANRIQNGSFTIDGKEYHIERN 552 (644)
Q Consensus 479 IqLtng~~lav~~~~gGa~l~~~~~dvv~G~di----~~~eY~~~~~~~~G--aiLgP~aNRI~~G~f~~dG~~Y~L~~N 552 (644)
+.+......+++...|+.+++++.. .+.++ +.+.|.. ..+.+| +++.||-|+++.+. +|.
T Consensus 27 ~~~~h~~~~a~islqGAqLLs~qP~---ge~evLWLS~~~p~~~-g~aIRGGIPICwPWFG~~~~~~---------~Pa- 92 (287)
T COG0676 27 IVVDHPLGSAAISLQGAQLLSWQPK---GEEEVLWLSSNAPFKG-GAAIRGGIPICWPWFGPLAQQG---------LPA- 92 (287)
T ss_pred eEeecccceeEEecCCceEEEecCC---CCCceEEecccCccCC-CCcccCCCcEEEeccCccCCCC---------CCc-
Confidence 4444554356666666777776652 22233 2344543 355676 89999999998765 777
Q ss_pred CCCCCCCCCCCCCcceeEEEEEec--CCEEEEEEEcCCCCCCCCeEEEEEEEEEEecCCeEEEEEEEEeCCceeeeeccc
Q psy5515 553 DGVNSIHGGARGFDKVLWLPVVTN--SDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDNRLIIKYNATTDKKTPISLTNH 630 (644)
Q Consensus 553 eg~n~LHGg~~g~~~~~W~v~~~~--~~sVtls~~~~d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atnd~~tP~nlg~H 630 (644)
||++|. ++|++.+.. .+.|.+++.....+. |..+.+++++++.+ .|+++++..+..+ ++...|
T Consensus 93 ------HG~AR~---~~W~l~~~~~~~~~v~v~f~L~~~~~--p~~~~lr~~~~~g~--~le~~l~~~~~~s--~~~AlH 157 (287)
T COG0676 93 ------HGFARN---RPWKLLEHDEDEDGVRVTFGLDLEDE--PHDFTLRLTFRFGE--TLELELESYGEES--FQAALH 157 (287)
T ss_pred ------cchhhc---CceeeeehhcccCceEEEEEeCCCcc--ccceEEEEEeeccc--eEEEEEEecChhH--HHHhhc
Confidence 999997 899998753 344444444432222 99999999999984 7999999888666 899999
Q ss_pred cceeCCC
Q psy5515 631 AYFNLAG 637 (644)
Q Consensus 631 pYFnL~G 637 (644)
|||+.+.
T Consensus 158 tYF~VgD 164 (287)
T COG0676 158 TYFRVGD 164 (287)
T ss_pred ceEEecc
Confidence 9999754
No 33
>KOG1594|consensus
Probab=98.31 E-value=4.6e-06 Score=85.88 Aligned_cols=136 Identities=17% Similarity=0.202 Sum_probs=94.3
Q ss_pred EEEEeeccceEEEEEcCCcc-eeEeeeeecccCccc----CcccccCCCCCCCC--CeEeccccccCCCeeEECCEEEEe
Q psy5515 477 TDIQLTRDITLQVTDIQLTH-DITLQVTDIQLTRDI----TLQGYRHPANPYMG--ATIGRVANRIQNGSFTIDGKEYHI 549 (644)
Q Consensus 477 t~IqLtng~~lav~~~~gGa-~l~~~~~dvv~G~di----~~~eY~~~~~~~~G--aiLgP~aNRI~~G~f~~dG~~Y~L 549 (644)
..|-|++....++++..+|+ ..+|+.+ .|.++ +.+-+ ++..+..| ++++|--|.. =.|
T Consensus 24 ~~ivL~~p~g~taev~L~Gg~V~SWK~~---~geElLf~S~kA~f-~ppKpIRGGIP~~FPQFG~~-----------g~l 88 (305)
T KOG1594|consen 24 DKIVLTDPRGSTAEVYLYGGQVVSWKNE---NGEELLFVSTKAIF-KPPKPIRGGIPICFPQFGNF-----------GSL 88 (305)
T ss_pred ceEEEeCCCCCeEEEEEeccEEEEeecC---CCceeEEechhhhc-CCCCcccCCcceEeeccCCC-----------Ccc
Confidence 35677777765665555544 4566653 34432 11122 22345666 5666654331 125
Q ss_pred cCCCCCCCCCCCCCCCcceeEEEEEec-------CCEEEEEEEcC-CCCCCCCeEEEEEEEEEEecCCeEEEEEEEEe--
Q psy5515 550 ERNDGVNSIHGGARGFDKVLWLPVVTN-------SDSVTMSYTSP-DGESGFPGTVHVTVMFTLTLDNRLIIKYNATT-- 619 (644)
Q Consensus 550 ~~Neg~n~LHGg~~g~~~~~W~v~~~~-------~~sVtls~~~~-d~~~GyPg~~~v~vtYtL~~~~~L~I~~~atn-- 619 (644)
++ |||+|+ +.|.++... .+.|.|.+.+. +...-||+.|+++++-.|.+ +.|++..+++|
T Consensus 89 ~q-------HGFaRn---~~W~v~~~p~~lp~~~~a~Vdl~Lk~~~~~~kiWp~~Fe~~lrv~l~~-g~Lt~~~rV~Ntd 157 (305)
T KOG1594|consen 89 PQ-------HGFARN---RFWEVENNPPPLPSLGKATVDLILKSSEDDLKIWPHSFELRLRVSLGD-GELTLTSRVRNTD 157 (305)
T ss_pred cc-------cccccc---eeeEeccCCCCCCcCCceeEEEEecCChhhhhhCCcceEEEEEEEEcC-CceEEEEEeecCC
Confidence 55 999998 999988642 36788988775 56689999999999999994 78999999888
Q ss_pred CCceeeeeccccceeCCCC
Q psy5515 620 DKKTPISLTNHAYFNLAGH 638 (644)
Q Consensus 620 d~~tP~nlg~HpYFnL~G~ 638 (644)
+++.-|++..|+||..+.-
T Consensus 158 ~KpFsF~~alHtYf~vsdi 176 (305)
T KOG1594|consen 158 SKPFSFSFALHTYFRVSDI 176 (305)
T ss_pred CCceEEEeEeeeeEeeccc
Confidence 6889999999999998653
No 34
>cd09269 deoxyribose_mutarotase deoxyribose mutarotase_like. Salmonella enterica serovar Typhi DeoM (earlier named as DeoX) is a mutarotase with high specificity for deoxyribose. It is encoded by one of four genes beonging to the deoK operon. This operon has also been found in Escherichia coli where it is more common in pathogenic than in commensal strains and is associated with pathogenicity. It has been found on a pathogenicity island from a human blood isolate AL863 and confers the ability to use deoxyribose as a carbon source; deoxyribose is not fermented by non-pathogenic E.coli K-12. Proteins in this family are members of the aldose-1-epimerase superfamily. Aldose 1-epimerases, or mutarotases, are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechani
Probab=97.85 E-value=5.2e-05 Score=80.44 Aligned_cols=96 Identities=17% Similarity=0.217 Sum_probs=70.4
Q ss_pred CeeEECCEEEEecCCC--CCCCCCCCCCC--CcceeEEEEEecC--CEEEEEEEcCCCCCCCCeEEEEEEEEEEec-CCe
Q psy5515 538 GSFTIDGKEYHIERND--GVNSIHGGARG--FDKVLWLPVVTNS--DSVTMSYTSPDGESGFPGTVHVTVMFTLTL-DNR 610 (644)
Q Consensus 538 G~f~~dG~~Y~L~~Ne--g~n~LHGg~~g--~~~~~W~v~~~~~--~sVtls~~~~d~~~GyPg~~~v~vtYtL~~-~~~ 610 (644)
|.|.+.+....+..+. ..+.|||-+.. | .+.|.++..++ ..++++-... ...+||++|+++.+|+|.. ++.
T Consensus 42 g~f~f~~Gl~~~g~p~~~~~~~LHG~~~~~p~-~~~w~~~~~d~~~~~l~l~g~~~-~~~~fg~~y~a~~~i~L~~g~~~ 119 (293)
T cd09269 42 GCFAFHSGLLANGCPGPEDTHPLHGEFPCAPM-DEAWLEVGEDASGDYLALTGEYE-YVQGFGHHYLAQPSVTLRAGSAL 119 (293)
T ss_pred ceEEEcCCccccCCCCCCCccCCcCCcCCCCc-cceEEEEEecCCCCEEEEEEEEE-eeeccCccEEEEEEEEEeCCCCE
Confidence 6677888878877663 57899998432 2 24555554333 3444444433 2368999999999999985 368
Q ss_pred EEEEEEEEe--CCceeeeeccccceeC
Q psy5515 611 LIIKYNATT--DKKTPISLTNHAYFNL 635 (644)
Q Consensus 611 L~I~~~atn--d~~tP~nlg~HpYFnL 635 (644)
|+|+++++| +.+||+.++.||||-.
T Consensus 120 l~i~~~VtN~g~~p~p~~~~~H~nfg~ 146 (293)
T cd09269 120 FDIGMDVTNLSAQPMPLMYMCHMNYAY 146 (293)
T ss_pred EEEEEEEEECCCCCChhhEecccccCC
Confidence 999999999 6799999999999976
No 35
>cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013. Proteins, similar to Escherichia coli c4013, are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.
Probab=97.60 E-value=0.00015 Score=76.22 Aligned_cols=146 Identities=14% Similarity=0.050 Sum_probs=88.8
Q ss_pred EEEEeCcEEEEEEc--------ccccc-CCCCCceeecCCCCccccCcEEEEecceEEEeCCCCCCccceeccCCCCCCC
Q psy5515 259 SFTIDGKEYHIERN--------DGVNA-IHGGARGFDKRSGSRELVNHVVKLFSDSYTEVDSQSLPTGEIRSVNGTAFDL 329 (644)
Q Consensus 259 ty~L~~n~L~I~~~--------TpvNl-nHpg~~YFNLg~~~~~I~dH~L~I~A~~~~~~D~~~IPTG~i~~V~gt~fDF 329 (644)
+|+|.+++|.|+++ +|+.+ .|+ ||..+. --.+.+|+++++...+.|+... .|.. .-.++
T Consensus 120 ~~~l~~~~l~i~~~VtN~g~~~~P~~~~~H~---n~~~p~---l~~~~~l~~p~~~~~p~~~~~~-~~~~-----~~~~~ 187 (284)
T cd09023 120 ETDLGSNEIRLEDRVTNEGFRPTPHMLLYHV---NFGYPL---LDEGARLEIPSKEVTPRDAHAA-EGLA-----SWNTY 187 (284)
T ss_pred EEecCCceEEEEEEEEeCCCCCCcceEEeeE---EcCCcc---cCCCCEEEecccccccCChhhc-cccc-----ccccc
Confidence 56667888999887 89999 999 997631 0137799999987777775411 1110 11345
Q ss_pred CCCc-ccchhhcccCCCCceeeEEcCCCCcccccccccccCCCCCccchhhhhhhcccccccCCCCcceeEEEEEeCCCC
Q psy5515 330 RLPK-YLGFALQETQWRGFDINYVLSGNLSTMAACTYIDINWGPLDWKLEHITCLQMRRHFEHPRYKSRSFFRVVHPKSG 408 (644)
Q Consensus 330 r~p~-~Lg~~l~~~~~~G~Dh~F~l~~~~~~~~~~~~~d~~~~p~~w~~~~~~~~~l~~~~~~~~~~~~~~a~l~~p~sg 408 (644)
..|. .+.+. .|+|.+.-+. + + ...+.|.+|+.|
T Consensus 188 ~~p~~~~~e~-------v~~~~~~~d~--~------------------g-------------------~~~~~l~~~~~g 221 (284)
T cd09023 188 LAPTPGFAEQ-------VYFHEPAADE--D------------------G-------------------RAPAALVNPRLG 221 (284)
T ss_pred cCCCCCCccE-------EEEEeccccC--C------------------C-------------------ceeEEEEcCCCC
Confidence 5552 23332 4666654211 1 0 235888999987
Q ss_pred eEEEEE--e-CCCEEEEEeCCCCCcccCCCCcccCCcCeEEeecc-cCCCCcCCCCCCceeeeec-CceeE
Q psy5515 409 RVLNVY--T-DQPGVQFYTGGNLRPIYGKQYALYDQFGAFCLETQ-KYPDAVHHCYYRVTDTQLT-RDITL 474 (644)
Q Consensus 409 ~~L~v~--T-d~p~v~vYT~n~l~~~~~~~g~~y~~~~gicLEpq-~~pda~n~~~~~~~~~~L~-~ditl 474 (644)
+.+++. + ..|.+++|++..- ..-.+||||+ ..||+.+...-......|. |+...
T Consensus 222 ~~~~l~~~~~~~p~~~~W~~~~~------------~~y~lalEP~T~~p~~~~~~~~~g~l~~L~PGEs~~ 280 (284)
T cd09023 222 LGVEVRFDTDTLPYLTQWKNTGA------------GAYVLGLEPATNFPNGRAFEREQGELPTLAPGESRS 280 (284)
T ss_pred cEEEEEEehhhCCHHHHHhccCC------------CccEEEEccccCCCcchHHHHHCCCcceECCCCeEE
Confidence 554444 4 3699999997521 1358899999 5899865422223333444 66443
No 36
>PF14486 DUF4432: Domain of unknown function (DUF4432); PDB: 3TY1_A.
Probab=87.03 E-value=35 Score=36.71 Aligned_cols=30 Identities=17% Similarity=0.131 Sum_probs=24.2
Q ss_pred EEEEEEEcCCceEEEEEEc-CCcEEEEEEecC
Q psy5515 102 VRRFTLTNHLLNTQVQIIT-YGATITSVITPD 132 (644)
Q Consensus 102 ~~~~tL~n~~~~~~v~i~~-~Ga~i~~l~~~~ 132 (644)
++.++++|+.| ++++|++ .|.-|-++...+
T Consensus 4 v~~l~i~N~~g-l~~~vlp~rg~dI~~~~~~G 34 (302)
T PF14486_consen 4 VRALEIRNGGG-LRFTVLPDRGMDIWDAEFDG 34 (302)
T ss_dssp -EEEEEEETTS--EEEEETTTTTEEEEEEETT
T ss_pred cEEEEEECCCC-cEEEEecccCCceEEEEECC
Confidence 66788999776 9999998 599999999854
No 37
>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]
Probab=85.18 E-value=39 Score=36.27 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=24.3
Q ss_pred EEEEEcCCceEEEEEEcCCcEEEEEEecCCCCcccceEe
Q psy5515 104 RFTLTNHLLNTQVQIITYGATITSVITPDCYNKLDDVVL 142 (644)
Q Consensus 104 ~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~~~g~~~dvvl 142 (644)
...+.... -++.|+-+||.+.|+.-++ . +|++.
T Consensus 26 ~~~~~h~~--~~a~islqGAqLLs~qP~g---e-~evLW 58 (287)
T COG0676 26 LIVVDHPL--GSAAISLQGAQLLSWQPKG---E-EEVLW 58 (287)
T ss_pred ceEeeccc--ceeEEecCCceEEEecCCC---C-CceEE
Confidence 34455554 5899999999999998764 2 57775
No 38
>PF14315 DUF4380: Domain of unknown function (DUF4380)
Probab=77.39 E-value=43 Score=35.29 Aligned_cols=60 Identities=12% Similarity=0.114 Sum_probs=39.1
Q ss_pred ceeEEEEEecCCEEEEEEEcCCCCCCCCeEEEEEEEEEEecCC-eEEEEEEEEeCCceeeeecccccee
Q psy5515 567 KVLWLPVVTNSDSVTMSYTSPDGESGFPGTVHVTVMFTLTLDN-RLIIKYNATTDKKTPISLTNHAYFN 634 (644)
Q Consensus 567 ~~~W~v~~~~~~sVtls~~~~d~~~GyPg~~~v~vtYtL~~~~-~L~I~~~atnd~~tP~nlg~HpYFn 634 (644)
..+|+++. +++.|+|+-... .. -.++++.+++|.++. .++|+.+++|..+.|+. +++|++
T Consensus 87 ~~p~~~~~-~~~~v~L~s~~~-~~----tgiq~~~~i~l~~~~~~i~v~~~i~N~~~~~~~--~a~W~~ 147 (274)
T PF14315_consen 87 NGPYEVEI-DDDGVRLTSPPS-PK----TGIQKERTITLDADRPSIEVTHRITNIGDWPVE--WAPWSV 147 (274)
T ss_pred CCceeEEE-cCCEEEEecCCC-Cc----cCcEEEEEEEECCCCCEEEEEEEEEeCCCCcce--eeeeee
Confidence 46777776 667776654332 11 347889999998743 59999999996555543 444443
No 39
>PF14486 DUF4432: Domain of unknown function (DUF4432); PDB: 3TY1_A.
Probab=76.72 E-value=9.2 Score=41.08 Aligned_cols=77 Identities=16% Similarity=0.097 Sum_probs=42.4
Q ss_pred CCCCCCCCCCcceeEEEEEe--cC---CEEEEEEEcCC-CCCCCCeEEEEEEEEEEecCCeEEEEEEEEe--CCceeeee
Q psy5515 556 NSIHGGARGFDKVLWLPVVT--NS---DSVTMSYTSPD-GESGFPGTVHVTVMFTLTLDNRLIIKYNATT--DKKTPISL 627 (644)
Q Consensus 556 n~LHGg~~g~~~~~W~v~~~--~~---~sVtls~~~~d-~~~GyPg~~~v~vtYtL~~~~~L~I~~~atn--d~~tP~nl 627 (644)
+.|||-... .+|+.+.. .+ ..|+++-.... .--|.++.++=+|+-++. .+.+.|+.+++| ..++|+.+
T Consensus 86 ~~LHG~i~~---~Pa~~v~~~~~~~~~~~i~v~G~v~~~~~fg~~l~l~r~i~~~~g-~~~i~i~d~VtN~~~~p~p~m~ 161 (302)
T PF14486_consen 86 YPLHGRISN---TPAEHVWLEIWDGDGYEIEVSGEVREAAGFGENLRLERTIRLRAG-SNTIRIEDRVTNLGFQPMPLMY 161 (302)
T ss_dssp E-TTBSGGG---S--SEEEEEEESSTT--EEEEEEEEEEETTTEEEEEEEEEEE-TT--SEEEEEEEEEE-SSS-EEEEE
T ss_pred ccccccccC---CCcceEEEEEecCCCcEEEEEEEEEEEEeccCcEEEEEEEEEECC-CcEEEEEEEEEECCCCCchhHH
Confidence 568998664 67753322 22 25555433321 113444444444444445 378999999998 68999999
Q ss_pred ccccceeCC
Q psy5515 628 TNHAYFNLA 636 (644)
Q Consensus 628 g~HpYFnL~ 636 (644)
-.|+=|--+
T Consensus 162 lyH~N~G~p 170 (302)
T PF14486_consen 162 LYHMNFGYP 170 (302)
T ss_dssp EEEEEE-TT
T ss_pred hhhhccCcc
Confidence 999876543
No 40
>KOG1594|consensus
Probab=43.99 E-value=1.7e+02 Score=31.39 Aligned_cols=30 Identities=17% Similarity=0.316 Sum_probs=25.9
Q ss_pred EEEEEEEcCCceEEEEEEcCCcEEEEEEecC
Q psy5515 102 VRRFTLTNHLLNTQVQIITYGATITSVITPD 132 (644)
Q Consensus 102 ~~~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~ 132 (644)
..++.|++.+| .+++|.=|||.++||++..
T Consensus 23 ~~~ivL~~p~g-~taev~L~Gg~V~SWK~~~ 52 (305)
T KOG1594|consen 23 LDKIVLTDPRG-STAEVYLYGGQVVSWKNEN 52 (305)
T ss_pred CceEEEeCCCC-CeEEEEEeccEEEEeecCC
Confidence 44678999987 9999999999999999954
No 41
>PF14849 YidC_periplas: YidC periplasmic domain; PDB: 3BS6_B 3BLC_B.
Probab=34.57 E-value=47 Score=34.26 Aligned_cols=27 Identities=33% Similarity=0.384 Sum_probs=22.1
Q ss_pred EEEEEcCCceEEEEEEcCCcEEEEEEecC
Q psy5515 104 RFTLTNHLLNTQVQIITYGATITSVITPD 132 (644)
Q Consensus 104 ~~tL~n~~~~~~v~i~~~Ga~i~~l~~~~ 132 (644)
+++|+|+. ++++|.+.||.|.++.+++
T Consensus 1 ~v~ven~~--~~~~~s~~GG~i~~~~Lk~ 27 (270)
T PF14849_consen 1 RVTVENDL--FKVTFSSKGGRIKSVELKK 27 (270)
T ss_dssp -EEEE-SS---EEEEETBTTEEEEEEEEE
T ss_pred CEEEECCC--EEEEEECCCCeEEEEEcCC
Confidence 47899998 9999999999999999864
No 42
>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain. Essentially all bacteria have a member of the YidC family, whose C-terminal domain is modeled by TIGR03592. The two copies are found in endospore-forming bacteria such as Bacillus subtilis appear redundant during vegetative growth, although the member designated spoIIIJ (stage III sporulation protein J) has a distinct role in spore formation. YidC, its mitochondrial homolog Oxa1, and its chloroplast homolog direct insertion into the bacterial/organellar inner (or only) membrane. This model describes an N-terminal sequence region, including a large periplasmic domain lacking in YidC members from Gram-positive species. The multifunctional YidC protein acts both with and independently of the Sec system.
Probab=33.51 E-value=6.6e+02 Score=27.32 Aligned_cols=41 Identities=27% Similarity=0.508 Sum_probs=28.1
Q ss_pred EEEEEEEcCCCCCCCCeEEEEEEEEEEecC-CeEEEEEEEEeCCceeee
Q psy5515 579 SVTMSYTSPDGESGFPGTVHVTVMFTLTLD-NRLIIKYNATTDKKTPIS 626 (644)
Q Consensus 579 sVtls~~~~d~~~GyPg~~~v~vtYtL~~~-~~L~I~~~atnd~~tP~n 626 (644)
.|+|++...+ .+.++-+|+++.+ -.+.++++++|....|++
T Consensus 162 ~v~l~~~~~~-------G~~v~k~ytf~~~sY~i~v~~~v~N~~~~~~~ 203 (366)
T TIGR03593 162 PVTLTWDNSN-------GVTVTKTYTFDRDSYLIDVEYKVTNNGDAPVS 203 (366)
T ss_pred EEEEEEECCC-------CeEEEEEEEEeCCeEEEEeEEEEEeCCCCCee
Confidence 5677666532 2788999999864 367788888886555554
No 43
>cd09269 deoxyribose_mutarotase deoxyribose mutarotase_like. Salmonella enterica serovar Typhi DeoM (earlier named as DeoX) is a mutarotase with high specificity for deoxyribose. It is encoded by one of four genes beonging to the deoK operon. This operon has also been found in Escherichia coli where it is more common in pathogenic than in commensal strains and is associated with pathogenicity. It has been found on a pathogenicity island from a human blood isolate AL863 and confers the ability to use deoxyribose as a carbon source; deoxyribose is not fermented by non-pathogenic E.coli K-12. Proteins in this family are members of the aldose-1-epimerase superfamily. Aldose 1-epimerases, or mutarotases, are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechani
Probab=27.13 E-value=1.2e+02 Score=32.54 Aligned_cols=64 Identities=14% Similarity=0.158 Sum_probs=42.4
Q ss_pred ceEEECCEEEEeecCCCcccccccccccCCCCCCccCCCCC-ccCcEE----e--C----------------c-------
Q psy5515 209 GSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYMGATIG-RVANRI----Q--N----------------G------- 258 (644)
Q Consensus 209 g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lHGg~~g-rf~~~~----~--~----------------g------- 258 (644)
|.|.+.+...++..+.. ...++|||-... .|+..+ + + |
T Consensus 42 g~f~f~~Gl~~~g~p~~------------~~~~~LHG~~~~~p~~~~w~~~~~d~~~~~l~l~g~~~~~~~fg~~y~a~~ 109 (293)
T cd09269 42 GCFAFHSGLLANGCPGP------------EDTHPLHGEFPCAPMDEAWLEVGEDASGDYLALTGEYEYVQGFGHHYLAQP 109 (293)
T ss_pred ceEEEcCCccccCCCCC------------CCccCCcCCcCCCCccceEEEEEecCCCCEEEEEEEEEeeeccCccEEEEE
Confidence 56788887777765532 247899998311 033332 1 1 1
Q ss_pred EEEEeC--cEEEEEEc--------ccccc-CCCCCceeec
Q psy5515 259 SFTIDG--KEYHIERN--------DGVNA-IHGGARGFDK 287 (644)
Q Consensus 259 ty~L~~--n~L~I~~~--------TpvNl-nHpg~~YFNL 287 (644)
+|+|.. +.|.|+++ +|+.+ .|+ ||-.
T Consensus 110 ~i~L~~g~~~l~i~~~VtN~g~~p~p~~~~~H~---nfg~ 146 (293)
T cd09269 110 SVTLRAGSALFDIGMDVTNLSAQPMPLMYMCHM---NYAY 146 (293)
T ss_pred EEEEeCCCCEEEEEEEEEECCCCCChhhEeccc---ccCC
Confidence 677754 88888887 79999 999 8866
No 44
>TIGR03067 Planc_TIGR03067 Planctomycetes uncharacterized domain TIGR03067. This domain occurs in several species, mostly from the Planctomycetes division of the bacteria. It is expanded into a paralogous family of at least twenty-five members in Gemmata obscuriglobus UQM 2246. This family appears related to TIGR03066, which also is expanded into a large paralogous family in Gemmata obscuriglobus.
Probab=22.18 E-value=2.3e+02 Score=25.87 Aligned_cols=62 Identities=11% Similarity=0.202 Sum_probs=38.3
Q ss_pred CceEEECCEEEEeecCCCcccccccccccCCCCCCcc----CCCCCccCcEEeCcEEEEeCcEEEEEEc
Q psy5515 208 NGSFTIDGKEYHIERNDGVITDTQLTHDITHPANPYM----GATIGRVANRIQNGSFTIDGKEYHIERN 272 (644)
Q Consensus 208 ~g~f~~~G~~y~l~~N~~~~~~~~~~l~~~~~~n~lH----Gg~~grf~~~~~~gty~L~~n~L~I~~~ 272 (644)
.+.++|.|.+|.+...++...-..|.||.+..+.++- +|. -..+...|.|.|++++|.|-|.
T Consensus 30 ~~~~~~~g~~~~~~~~~~~~~~~~~~Ld~~~~Pk~id~~~~~g~---~~g~~~~gIY~l~gd~L~vC~~ 95 (107)
T TIGR03067 30 RLVWTFKGDKLTVKDGEGDQGKGTFKLDPAANPKTIDLTSPDGP---DKGKTIKGIYKLDGDTLTVCFS 95 (107)
T ss_pred ceEEEEeCCEEEEEcCCCcceeEEEEECCCCCccEEEEEccCCC---CCCCEEEEEEEEcCCEEEEEEC
Confidence 4678888888887766552213567776654444321 111 1112345699999999999886
Done!