Query psy5522
Match_columns 1397
No_of_seqs 428 out of 1892
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 19:42:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5522.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5522hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4acq_A Alpha-2-macroglobulin; 100.0 9E-196 3E-200 1977.5 94.3 1188 1-1395 7-1288(1451)
2 3prx_B Cobra venom factor; imm 100.0 2E-189 7E-194 1914.2 106.9 1151 1-1394 24-1309(1642)
3 2pn5_A TEP1R, thioester-contai 100.0 2E-165 8E-170 1695.1 110.8 1139 2-1339 1-1317(1325)
4 3cu7_A Complement C5; Mg domai 100.0 2E-164 6E-169 1711.6 87.6 1184 1-1335 22-1525(1676)
5 2b39_A C3; thioester, immune d 100.0 6E-160 2E-164 1662.7 85.5 1152 1-1390 25-1324(1661)
6 3hrz_A Cobra venom factor; ser 100.0 1.1E-90 3.7E-95 876.3 71.0 582 1-616 2-614 (627)
7 4fxk_B Complement C4-A alpha c 100.0 5.8E-94 2E-98 936.6 28.2 560 648-1394 90-685 (767)
8 2hr0_B Complement C3 alpha' ch 100.0 1.3E-88 4.4E-93 897.5 25.3 487 649-1279 11-524 (915)
9 2hr0_A Complement C3 beta chai 100.0 7.5E-81 2.6E-85 798.7 68.9 584 1-617 3-633 (645)
10 4fxk_A Complement C4 beta chai 100.0 1.4E-78 4.9E-83 782.6 57.9 588 1-614 3-641 (656)
11 1hzf_A Complement factor C4A; 100.0 1.6E-53 5.6E-58 506.9 5.1 319 850-1279 2-349 (367)
12 3hrz_B Cobra venom factor; ser 100.0 5.7E-48 2E-52 432.4 26.4 223 649-883 11-245 (252)
13 2wy7_A Complement C3D fragment 100.0 4.7E-50 1.6E-54 467.4 8.0 295 881-1367 5-308 (310)
14 3prx_B Cobra venom factor; imm 100.0 1.6E-41 5.6E-46 462.9 74.8 235 955-1335 1208-1490(1642)
15 1qqf_A Protein (complement C3D 100.0 9.3E-46 3.2E-50 424.7 6.5 255 893-1279 1-263 (277)
16 4acq_A Alpha-2-macroglobulin; 100.0 4E-37 1.4E-41 419.7 50.6 227 955-1322 1180-1443(1451)
17 2b39_A C3; thioester, immune d 100.0 8E-34 2.7E-38 395.8 46.8 239 957-1341 1228-1518(1661)
18 3hrz_C Cobra venom factor; ser 100.0 3.7E-34 1.3E-38 336.7 12.8 171 1024-1335 40-227 (379)
19 2pn5_A TEP1R, thioester-contai 100.0 7.8E-24 2.7E-28 291.3 72.0 196 956-1156 1047-1273(1325)
20 1edy_A Alpha 1-macroglobulin; 99.9 4.4E-28 1.5E-32 241.9 10.3 122 1060-1322 2-129 (134)
21 1ayo_A Alpha-2-macroglobulin; 99.9 5.4E-28 1.8E-32 239.9 10.3 121 1060-1322 2-128 (130)
22 3cu7_A Complement C5; Mg domai 99.9 7.4E-24 2.5E-28 296.3 51.7 193 957-1157 1247-1486(1676)
23 4fxk_C Complement C4 gamma cha 99.9 8.3E-27 2.8E-31 261.7 7.1 122 1073-1335 9-135 (291)
24 2p9r_A Alpha-2-M, alpha-2-macr 99.9 2.4E-24 8.3E-29 207.7 14.1 100 98-197 2-102 (102)
25 2icn_B Prolactin-inducible pro 99.8 2.3E-20 7.9E-25 179.7 11.8 97 712-825 5-117 (118)
26 3es6_B Prolactin-inducible pro 99.8 4.6E-20 1.6E-24 179.0 10.4 108 711-835 4-111 (118)
27 2hr0_B Complement C3 alpha' ch 99.8 1.6E-20 5.5E-25 248.2 6.1 192 957-1156 481-721 (915)
28 2sqc_A Squalene-hopene cyclase 99.6 1.6E-15 5.3E-20 192.3 10.0 254 901-1279 311-597 (631)
29 1w6k_A Lanosterol synthase; cy 99.5 5.8E-15 2E-19 188.8 8.6 283 879-1279 361-693 (732)
30 4fxk_B Complement C4-A alpha c 99.2 4.9E-11 1.7E-15 155.5 10.8 109 956-1068 581-724 (767)
31 2hr0_A Complement C3 beta chai 98.6 0.0003 1E-08 89.7 42.4 397 9-441 116-566 (645)
32 3hrz_A Cobra venom factor; ser 98.3 0.00094 3.2E-08 84.3 38.7 399 9-452 114-558 (627)
33 4fxk_A Complement C4 beta chai 98.2 0.0014 4.8E-08 83.7 37.2 419 9-455 130-588 (656)
34 1hzf_A Complement factor C4A; 97.9 6.7E-06 2.3E-10 97.3 6.0 52 957-1012 305-359 (367)
35 3dss_B Geranylgeranyl transfer 97.7 0.0003 1E-08 81.5 15.6 101 890-1002 36-136 (331)
36 1qqf_A Protein (complement C3D 97.6 3.3E-05 1.1E-09 87.8 5.1 50 957-1011 220-272 (277)
37 2wy7_A Complement C3D fragment 97.6 3.9E-05 1.3E-09 88.6 5.5 51 957-1012 236-289 (310)
38 1cwv_A Invasin; integrin-bindi 97.5 0.014 4.8E-07 71.2 27.1 250 112-400 25-286 (492)
39 2h6f_B Protein farnesyltransfe 97.5 0.00031 1.1E-08 84.1 11.8 83 911-1002 111-194 (437)
40 1wlh_A Gelation factor; ABP-12 97.1 0.026 8.9E-07 64.9 20.8 249 111-400 20-279 (311)
41 3tkv_A FDEC fragment B, attach 97.0 0.05 1.7E-06 64.9 22.7 271 101-399 95-382 (414)
42 2sqc_A Squalene-hopene cyclase 96.5 0.0041 1.4E-07 78.6 9.0 90 904-1004 497-596 (631)
43 3idu_A Uncharacterized protein 96.2 0.035 1.2E-06 54.6 11.9 82 712-812 16-98 (127)
44 1cwv_A Invasin; integrin-bindi 95.9 3.7 0.00013 49.9 30.3 291 61-400 70-380 (492)
45 3q7a_B Farnesyltransferase bet 95.8 0.02 6.9E-07 68.8 9.7 109 887-1002 75-189 (520)
46 1w6k_A Lanosterol synthase; cy 95.7 0.018 6.2E-07 73.7 9.5 72 921-1003 611-691 (732)
47 3isy_A Bsupi, intracellular pr 95.4 0.12 4E-06 50.0 11.5 82 111-192 16-120 (120)
48 3dss_B Geranylgeranyl transfer 95.3 0.034 1.2E-06 64.2 8.7 75 915-1001 157-231 (331)
49 1wlh_A Gelation factor; ABP-12 94.8 1.7 5.7E-05 49.6 21.3 198 10-231 18-230 (311)
50 3q7a_B Farnesyltransferase bet 94.3 0.087 3E-06 63.4 9.1 91 898-1002 137-237 (520)
51 1qfh_A Protein (gelation facto 93.9 0.75 2.6E-05 49.4 15.0 105 111-230 21-130 (212)
52 3tkv_A FDEC fragment B, attach 93.7 3.2 0.00011 49.3 21.0 217 57-291 152-381 (414)
53 1n4q_B Geranyltransferase type 93.0 0.1 3.6E-06 61.1 6.5 89 900-1002 121-213 (377)
54 2h6f_B Protein farnesyltransfe 92.7 0.11 3.6E-06 62.2 6.2 79 911-1001 211-290 (437)
55 2p9r_A Alpha-2-M, alpha-2-macr 91.9 2 7E-05 40.1 12.8 78 320-400 9-86 (102)
56 3e8v_A Possible transglutamina 90.8 0.77 2.6E-05 40.9 7.9 59 331-399 2-60 (82)
57 1n4q_B Geranyltransferase type 90.2 0.41 1.4E-05 56.0 7.5 71 922-1002 69-164 (377)
58 2bb6_A TCII, TC II, transcobal 90.1 0.32 1.1E-05 57.1 6.3 88 1174-1279 133-231 (414)
59 2ds4_A Tripartite motif protei 85.3 1.7 5.7E-05 41.4 7.2 70 109-182 24-97 (113)
60 1g0d_A Protein-glutamine gamma 84.6 10 0.00036 47.0 15.2 121 687-827 559-683 (695)
61 3rgh_A Filamin-A; cell adhesio 83.4 2.3 8E-05 39.7 7.0 64 110-182 22-85 (100)
62 2bb6_A TCII, TC II, transcobal 82.8 1.8 6.2E-05 50.8 7.3 97 902-1011 182-283 (414)
63 2l0d_A Cell surface protein; s 82.7 6.7 0.00023 37.5 10.0 73 721-812 11-86 (114)
64 1qfh_A Protein (gelation facto 81.9 29 0.00099 36.8 16.0 150 11-182 20-180 (212)
65 2r51_A Vacuolar protein sortin 81.3 81 0.0028 36.0 23.0 104 89-195 27-157 (340)
66 1r76_A Pectate lyase; A-helica 81.0 1.2 4.2E-05 51.9 5.0 85 917-1001 235-335 (408)
67 1ex0_A Coagulation factor XIII 80.9 19 0.00065 45.0 15.6 141 668-827 577-727 (731)
68 2d7m_A Filamin-C; beta-sandwic 79.7 3.5 0.00012 39.5 7.0 63 111-182 28-90 (115)
69 2dmb_A Filamin-B; beta-sandwic 77.4 3.7 0.00013 40.0 6.4 63 111-182 27-89 (124)
70 3pdd_A Glycoside hydrolase, fa 77.2 73 0.0025 33.1 21.8 161 200-402 1-167 (190)
71 2pmv_A Gastric intrinsic facto 77.0 1.1 3.9E-05 52.1 3.0 83 1175-1279 112-208 (399)
72 3dra_B Geranylgeranyltransfera 76.5 6.4 0.00022 46.0 9.2 107 889-1001 20-140 (390)
73 2d7p_A Filamin-C; beta-sandwic 75.7 3.9 0.00013 39.1 5.9 63 110-182 25-87 (112)
74 1vjj_A Protein-glutamine gluta 75.4 1.6E+02 0.0056 36.6 21.5 140 199-345 482-625 (692)
75 1vjj_A Protein-glutamine gluta 75.3 19 0.00065 44.8 13.3 113 687-818 569-682 (692)
76 2q3z_A Transglutaminase 2; tra 74.8 11 0.00038 47.0 11.0 132 668-818 534-676 (687)
77 1ex0_A Coagulation factor XIII 74.5 1.8E+02 0.0062 36.4 22.7 140 199-345 518-661 (731)
78 2dic_A Filamin-B; beta-sandwic 74.4 4.9 0.00017 37.8 6.2 61 111-182 26-86 (105)
79 1g0d_A Protein-glutamine gamma 74.0 65 0.0022 40.1 17.4 147 198-353 472-622 (695)
80 1v05_A Filamin C; actin-bindin 71.9 7.2 0.00025 35.8 6.7 64 110-182 20-83 (96)
81 2dj4_A Filamin-B; beta-sandwic 71.8 7.5 0.00026 36.7 6.9 64 110-182 26-89 (108)
82 2zws_A Neutral ceramidase; pri 71.3 11 0.00036 47.3 10.0 81 99-181 525-620 (646)
83 2q3z_A Transglutaminase 2; tra 71.2 2.1E+02 0.0072 35.7 23.9 141 199-345 473-618 (687)
84 3dra_B Geranylgeranyltransfera 70.5 6.3 0.00022 46.1 7.2 99 898-1003 91-214 (390)
85 2e9j_A Filamin-B; beta-sandwic 69.7 4 0.00014 39.3 4.5 64 110-182 37-100 (119)
86 1gxm_A Pectate lyase; mechanis 69.4 1.4 4.9E-05 49.9 1.4 66 935-1000 39-117 (332)
87 2ee6_A Filamin-B; beta-sandwic 69.3 6.1 0.00021 37.1 5.6 61 111-182 26-86 (105)
88 2pmv_A Gastric intrinsic facto 68.5 3.2 0.00011 48.4 4.1 67 935-1012 191-260 (399)
89 3idu_A Uncharacterized protein 67.5 20 0.00067 35.0 8.9 70 109-182 29-98 (127)
90 2dia_A Filamin-B; beta-sandwic 67.5 9.3 0.00032 36.3 6.5 64 110-182 25-88 (113)
91 2w0p_A Filamin-A; alternative 67.1 9.6 0.00033 34.9 6.3 61 111-182 18-78 (94)
92 3cnk_A Filamin-A; FLNA24, X-RA 65.6 11 0.00039 33.9 6.5 64 110-182 13-76 (89)
93 2bp3_A Filamin A; structural p 64.8 12 0.00042 34.3 6.7 60 112-182 22-81 (97)
94 3c12_A FLGD, flagellar protein 64.4 17 0.00059 35.8 8.1 51 131-181 38-92 (138)
95 2k9u_A Gamma filamin; cytoskel 64.1 15 0.00051 35.3 7.3 61 111-182 33-93 (119)
96 2eea_A Filamin-B; beta-sandwic 62.3 13 0.00046 35.3 6.6 61 111-182 36-96 (115)
97 2xzz_A Protein-glutamine gamma 61.6 18 0.00061 33.8 7.0 81 717-814 8-89 (102)
98 1lyq_A PCOC copper resistance 61.6 28 0.00096 32.6 8.4 60 132-192 33-104 (104)
99 1gxm_A Pectate lyase; mechanis 61.5 3.5 0.00012 46.7 2.6 70 931-1000 101-189 (332)
100 3osv_A Flagellar basal-BODY RO 61.4 41 0.0014 33.1 10.2 51 131-181 36-90 (138)
101 3hrz_B Cobra venom factor; ser 61.0 91 0.0031 34.0 13.9 77 260-345 35-113 (252)
102 3e8v_A Possible transglutamina 59.3 12 0.00041 33.4 5.0 48 217-271 2-50 (82)
103 4b7l_A Filamin-B; structural p 58.0 16 0.00055 42.1 7.4 64 111-182 271-335 (347)
104 2c9r_A COPC, copper resistance 57.6 31 0.0011 32.1 8.0 60 132-192 32-102 (102)
105 1r76_A Pectate lyase; A-helica 56.6 6 0.0002 46.2 3.4 70 931-1000 179-266 (408)
106 3vmn_A Dextranase; TIM barrel, 54.9 31 0.0011 42.5 9.3 98 100-199 9-121 (643)
107 3n6y_A Immunoglobulin-like pro 54.6 80 0.0027 30.7 10.2 80 109-191 46-136 (137)
108 2xwx_A GBPA, glcnac-binding pr 54.1 3.1E+02 0.011 31.8 20.2 219 58-304 141-384 (391)
109 3hrz_C Cobra venom factor; ser 53.9 76 0.0026 36.9 12.3 104 131-239 9-122 (379)
110 2nqc_A Filamin-C; immunoglobul 52.4 42 0.0014 33.1 8.4 59 112-182 61-119 (138)
111 2di8_A Filamin-B; beta-sandwic 52.2 19 0.00066 34.0 5.7 61 111-182 26-86 (111)
112 2dlg_A Filamin-B; beta-sandwic 49.5 19 0.00064 33.6 5.0 64 110-182 14-77 (102)
113 2d7n_A Filamin-C; beta-sandwic 49.3 37 0.0013 31.0 6.9 48 131-182 21-68 (93)
114 2dib_A Filamin-B; beta-sandwic 47.8 11 0.00037 36.7 3.2 68 109-182 36-103 (128)
115 2di9_A Filamin-B; beta-sandwic 47.6 30 0.001 33.7 6.5 60 112-182 47-106 (131)
116 3d33_A Domain of unknown funct 45.8 86 0.003 29.5 8.9 59 131-192 48-108 (108)
117 2fau_A Vacuolar protein sortin 44.1 4E+02 0.014 30.2 23.7 140 88-239 26-202 (341)
118 2k7p_A Filamin-A; IG-like, ABP 41.5 3.1E+02 0.011 28.1 15.1 48 131-182 33-80 (188)
119 2k7p_A Filamin-A; IG-like, ABP 41.4 46 0.0016 34.6 7.1 61 111-182 112-172 (188)
120 2d7o_A Filamin-C; beta-sandwic 40.9 15 0.0005 34.8 2.9 61 111-182 26-86 (111)
121 2ee9_A Filamin-B; beta-sandwic 39.6 58 0.002 29.9 6.5 49 130-182 28-76 (95)
122 2dmc_A Filamin-B; beta-sandwic 38.0 15 0.00052 35.1 2.5 65 109-182 27-91 (116)
123 2eec_A Filamin-B; beta-sandwic 35.7 88 0.003 30.1 7.6 59 112-182 37-95 (125)
124 2ds4_A Tripartite motif protei 34.5 1.9E+02 0.0064 26.7 9.7 71 324-395 24-94 (113)
125 2k7q_A Filamin-A; IG-like, ABP 34.0 2.1E+02 0.0073 29.4 10.9 48 131-182 30-77 (191)
126 3sd2_A Putative member of DUF3 30.8 2.5E+02 0.0084 26.0 9.0 57 131-192 44-101 (101)
127 2k7q_A Filamin-A; IG-like, ABP 30.0 69 0.0024 33.2 6.2 155 8-182 11-172 (191)
128 2di7_A BK158_1; beta-sandwich, 29.1 18 0.00061 35.1 1.3 75 117-193 38-118 (124)
129 3th1_A Chlorocatechol 1,2-diox 28.8 94 0.0032 34.0 7.1 54 325-380 95-157 (260)
130 4ayb_E DNA-directed RNA polyme 28.4 48 0.0016 34.1 4.6 35 105-140 132-166 (180)
131 3abz_A Beta-glucosidase I; gly 28.0 1.6E+02 0.0053 38.1 10.1 67 728-803 734-802 (845)
132 2x41_A Beta-glucosidase; hydro 27.9 1E+02 0.0035 39.1 8.4 68 728-804 614-682 (721)
133 4g9s_B Inhibitor of G-type lys 27.2 1.3E+02 0.0043 28.3 6.9 57 110-180 35-91 (111)
134 2j3s_A Filamin-A; cytoskeleton 26.6 1E+02 0.0034 34.3 7.2 61 111-182 21-81 (288)
135 3gm8_A Glycoside hydrolase fam 26.1 7.7E+02 0.026 31.4 16.1 105 297-404 676-792 (801)
136 2boy_A 3-chlorocatechol 1,2-di 26.0 1.2E+02 0.0041 33.0 7.3 54 325-380 98-160 (254)
137 2bgo_A Endo-B1,4-mannanase 5C; 25.9 1.4E+02 0.0049 29.3 7.0 35 797-831 91-126 (140)
138 4ank_A Transthyretin; hormone 25.3 1.7E+02 0.006 29.0 7.7 62 120-182 35-97 (147)
139 1f00_I Intimin; immunoglobulin 25.2 1.4E+02 0.0049 33.0 7.9 63 328-400 19-81 (282)
140 2r5o_A Putative ATP binding co 23.9 2.3E+02 0.0078 29.1 8.9 73 107-181 64-146 (188)
141 1f00_I Intimin; immunoglobulin 23.0 2E+02 0.0069 31.8 8.5 61 214-292 19-80 (282)
142 3pay_A Putative adhesin; struc 22.3 1.1E+02 0.0037 34.6 6.4 48 132-182 36-85 (314)
143 2r39_A FIXG-related protein; s 22.1 4.9E+02 0.017 24.3 10.6 62 733-811 35-100 (118)
144 2azq_A Catechol 1,2-dioxygenas 21.7 1.6E+02 0.0053 33.1 7.3 27 325-353 128-154 (311)
145 2hb0_A CFA/I fimbrial subunit 21.7 1.8E+02 0.0062 32.8 7.7 27 215-241 192-218 (369)
146 2e6j_A Hydin protein; PAPD, st 21.2 3E+02 0.01 25.2 8.4 74 724-815 21-97 (112)
147 2x5p_A FBA2, fibronectin bindi 21.1 5.1E+02 0.017 24.6 9.9 56 115-181 28-83 (121)
148 1tmx_A Hydroxyquinol 1,2-dioxy 20.9 1.6E+02 0.0054 32.8 7.1 27 325-353 129-155 (293)
149 3n9t_A PNPC; phospholipid bind 20.8 1.7E+02 0.0057 32.6 7.2 27 325-353 125-151 (290)
150 1suj_A CONE arrestin; sensory 20.6 1.1E+02 0.0037 35.6 6.0 37 93-129 189-225 (392)
151 3pdd_A Glycoside hydrolase, fa 20.6 6.9E+02 0.024 25.5 19.1 166 3-197 3-184 (190)
152 3hhy_A 1,2-CTD, catechol 1,2-d 20.3 1.6E+02 0.0055 32.5 6.9 27 325-353 126-153 (280)
153 1ifr_A Lamin A/C; immunoglobul 20.2 2.6E+02 0.009 26.7 7.6 52 97-150 46-111 (121)
154 1w8o_A Bacterial sialidase; 3D 20.2 4.3E+02 0.015 32.2 12.0 41 158-198 418-460 (601)
No 1
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=100.00 E-value=9.4e-196 Score=1977.51 Aligned_cols=1188 Identities=29% Similarity=0.436 Sum_probs=1031.1
Q ss_pred CEEEEeeCeeecCCeEEEEEEeecCCccEEEEEEEEeecCCCCeeEEeEEEEECCCceeEEEEEcCCCCCc--eeEEEEE
Q psy5522 1 YYTVVAPKVLRPNGEYHVAVSTQAVSEATQVSVEVGGKQDSGGEFRTKQLLSVDPFSTRIVKLDIGDLGPG--QYNLTVK 78 (1397)
Q Consensus 1 ~y~v~~P~~lr~g~~~~v~v~l~~~~~~v~v~v~L~~~~~~~~~~~~~~~~~~~~~~~~~~~f~vP~~~~~--~~~l~v~ 78 (1397)
+|+|++|++||+|++|+|||++++.+++++|+++|++. +.+.++++..+.+++.++|++|+||....+ .+.|+|+
T Consensus 7 ~y~v~~P~~lr~g~~e~v~v~l~~~~~~v~v~v~l~~~---~~~~~~~~~~~~~~~~~~~~~~~vP~~~~~~~~~~v~v~ 83 (1451)
T 4acq_A 7 QYMVLVPSLLHTETTEKGCVLLSYLNETVTVSASLESV---RGNRSLFTDLEAENDVLHCVAFAVPKSSSNEEVMFLTVQ 83 (1451)
T ss_dssp CEEEEEESEEESSSCCCEEEEECSCSSCCEEEEEEEET---TTCCCEEEEECCBTTBCEEECCCCCCCSCTEEEEEEEEE
T ss_pred cEEEEECCeEeCCCcEEEEEEEECCCCCEEEEEEEEeC---CCCeEEEEEeeccCCceEEEEEECCCCCCCCCcEEEEEE
Confidence 59999999999999999999999999999999999976 234455555556778899999999976533 3666666
Q ss_pred ec-CceeeEeeEEEEEEecccEEEEEcCCCcccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCc
Q psy5522 79 GS-GSLNFYNSTGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRG 157 (1397)
Q Consensus 79 g~-~~~~f~~~~~v~~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~G 157 (1397)
|. +++.|.++++|+++.+++++|||||||||||||||+||+++++.+++|.....+.|+|+||+|++|+||..+++..|
T Consensus 84 ~~~~~~~f~~~~~v~v~~~~~~~fiqTDK~iY~Pgq~V~~rv~~~~~~~~p~~~~~~~v~i~dp~g~~i~~~~~~~~~~G 163 (1451)
T 4acq_A 84 VKGPTQEFKKRTTVMVKNEDSLVFVQTDKSIYKPGQTVKFRVVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGG 163 (1451)
T ss_dssp EECSSCCEEEEEEEEEECCCCEEEEEESCSEECTTCEEEEEEEEECTTCCBCCCEEEEEEEECTTSCEEEEEEEEECBTT
T ss_pred EEeCCeEEEEEEEEEEEccCccEEEECCCCcCCCCCEEEEEEEEECCCCcCccCceeEEEEECCCCCEEEEeeeccCCCC
Confidence 64 46899999999999999999999999999999999999999999999985555579999999999999999999999
Q ss_pred eeeeeeecCCCCCCeeEEEEEEEcC-eEEEEEEEEeeecCCcEEEEEeCCCceEeeCCeEEEEEEEEEecCccccceEEE
Q psy5522 158 VFSADLQLSKSPVLGDWNITINVLD-QKFTKRFTVAEYVLPKFEVNVNVPPHATFKDSKVVISVNAKYTYGKPVKGEATI 236 (1397)
Q Consensus 158 i~~~sf~L~~~~~lG~y~I~v~~~~-~~~~~~F~VeEYvLPkFeV~v~~p~~i~~~~~~~~v~v~AkYtyGkPV~G~v~v 236 (1397)
+++++|+||++|.+|.|+|++..++ ...+++|+|||||||+|||+|++|+.+++.++++.++|||+|+||+||+|++++
T Consensus 164 ~~~~~f~L~~~~~~G~w~I~~~~~~~~~~~~~F~V~eYvlP~FeV~v~~~~~~~~~~~~~~~~i~a~Y~~G~pV~G~~~v 243 (1451)
T 4acq_A 164 LKQFSFPLSSEPFQGSYKVVVQKKSGGRTEHPFTVEEFVLPKFEVQVTVPKIITILEEEMNVSVCGLYTYGKPVPGHVTV 243 (1451)
T ss_dssp EEEEEEECCSSCCCEEEEEEEECTTCCEEEEEEEECCCCCCSCEEEEECCSEEESSCSCCEEEEEEECSSSCBCCCEEEE
T ss_pred eEEEEeECCCCCCceeEEEEEEecCCceEEEEEEEeeeeCCcEEEEEeCCceEeecCCEEEEEEEEEEcCCCEEcceEEE
Confidence 9999999999999999999999874 678999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCc-----cccccccceeEEeecCceEEEEEechhhhccc-cccceEEEEEEEEEECCcceEEeeEEEEEEEE
Q psy5522 237 TAYPTIFSGV-----IQPLFQTPVRKVVPIDGKTVIEFDVVKELQLT-DEYERNIHFDVAVEEALTGRRQNNTGSVVFHK 310 (1397)
Q Consensus 237 ~v~~~~~~g~-----~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~~-~~~~~~l~V~a~VtE~gTG~~~~~~~~i~i~~ 310 (1397)
++|++....+ ....+|.++.++++.+||+++.++++. ++.. ..+.+.++|+|+|+|++||++++++..++|+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~l~V~atVtE~gtg~~~~~~~~i~i~~ 322 (1451)
T 4acq_A 244 SICRKYSDASDCHGEDSQAFCEKFSGQLNSHGCFYQQVKTKV-FQLKRKEYEMKLHTEAQIQEEGTVVELTGRQSSEITR 322 (1451)
T ss_dssp CCBCCCTTTTTSCSSCCCCCBCCEEEECCSSCCCEEECCGGG-SCSSSSCCBCBCEEEEECSSSCCSCCEEECCCCEEEC
T ss_pred EEEEeccccccccccccccccceeeEEEcCCeEEEEEEEHHH-hcchhhccCeEEEEEEEEEEccceEEEeceEEEEEEe
Confidence 9998743211 123467667788999999999999877 7653 34567999999999999999999999999999
Q ss_pred eeeEEEEEecCCcccCCCeEEEEEEEEccCCCccCCCCceEEEEEeeeccccccceeeEeeCCCeeEEEEEeCCCCCcee
Q psy5522 311 HKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGMIKLVYYPPANENVT 390 (1397)
Q Consensus 311 ~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~ 390 (1397)
++|+|.|.+++.+||||+||.++|+++++||+|+++. .|.+..... ....+++||++|++.|+|+++.. ...
T Consensus 323 s~~~i~f~~t~~~fkPG~pf~~~v~v~~~dg~P~~~~--~v~v~~~~~-----~~~~~~~t~~~G~a~f~i~~~~~-~~~ 394 (1451)
T 4acq_A 323 TITKLSFVKVDSHFRQGIPFFGQVRLVDGKGVPIPNK--VIFIRGNEA-----NYYSNATTDEHGLVQFSINTTNV-MGT 394 (1451)
T ss_dssp CCSEEEEEEECSEECSSSCCEEEEEEECTTSCBCCSC--BCEEEETTT-----CCCCCCBCCTTSEEEEECCCCSS-SCE
T ss_pred eeeEEEEecCCCcccCCCcEEEEEEEEcCCCCcCCCc--eEEEEeccc-----ceeeeeEeCCCCcEEEEEeCCCC-CCc
Confidence 9999999999999999999999999999999999964 455554211 12356789999999999998732 233
Q ss_pred EEEEEEEecCcc-------------eEEEEEEeecCCCCCeEEEEecCCCCCCCCeEEEEEEecC--------CcceEEE
Q psy5522 391 TLGIEAEYLDIK-------------EWFSTISASESPSNSFIQAALLTQNPKVNKDVELEINSTA--------PLKYISY 449 (1397)
Q Consensus 391 ~l~l~a~~~~~~-------------~~~~~v~~~~S~s~s~L~i~~~~~~~~~G~~~~v~v~s~~--------~~~~~~y 449 (1397)
.++|+|++.+.. .+.+++.+|+|+|++||+|.++++.++||+++.|.|++.. +..+|+|
T Consensus 395 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~s~syL~I~~~~~~l~~G~~~~v~v~~~~~~~~~~~~~~~~f~Y 474 (1451)
T 4acq_A 395 SLTVRVNYKDRSPCYGYQWVSEEHEEAHHTAYLVFSPSKSFVHLEPMSHELPCGHTQTVQAHYILNGGTLLGLKKLSFYY 474 (1451)
T ss_dssp EEEEESCCCCCSCCCTTSSSCSSCCCCEEEEEEBCCSSSCEEEECCCCSCBCSSSCEEECEEEECSSCCSSCCSEEEEEE
T ss_pred EEEEEEEEecCccccccccccccccceeEEEEeecCCCCccEEEEecCcccCCCCEEEEEEEEEecccccccccceEEEE
Confidence 488888776432 3567888999999999999999999999999999998542 2357999
Q ss_pred EEEeCCeEEEEEEEEecC----CceeEEEEEeeCCCCCceeEEEEEEEecCCeEEEEeEEEEEcccccceeeEEecCCCC
Q psy5522 450 QVLGRGDVIMADTITVPG----NKMSTVIRFLATYAMAPTAHVIVQYVREDGEVVADGLDLELEGGLQNFVSANVSPDET 525 (1397)
Q Consensus 450 lV~srG~Iv~~~~~~~~~----~~~~~~~~l~vt~~maP~a~l~vy~v~~~gevvads~~~~V~~~f~nkV~l~~s~~~~ 525 (1397)
+|++||+|+.+|++.+.. .++.++|+|+++++|+|.++|+|||++++||+|+|+++|+|++||+|+|+|+|+++++
T Consensus 475 lV~srG~Iv~~g~~~~~~~~~~~~~~~s~~l~vt~~m~P~~rllvyyi~~~gEvVaDs~~~~V~~c~~nkV~l~~s~~~~ 554 (1451)
T 4acq_A 475 LIMAKGGIVRTGTHGLLVKQEDMKGHFSISIPVKSDIAPVARLLIYAVLPTGDVIGDSAKYDVENCLANKVDLSFSPSQS 554 (1451)
T ss_dssp EEEETTEEEEEEEEEEECCSSCCCCCCCEEECCCTTSCSEEEEEEEEECTTSCEEEEEEEEEBCCCCSSCCEECCCCSCB
T ss_pred EEEECCeEEEeeeEEecccccccccEEEEEEeCCcccCccEEEEEEEEecCCEEEEEEEEEEeecccCCEEEEEeCCccC
Confidence 999999999999988743 2467899999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEEecCCcEEEEEEEeeecccccCCCCCChhHHhHhccccCCCC----------CCCCcccccc-cc--ccC
Q psy5522 526 EPGSNIQINLEAKPNSYIGLLAVDQKVLLLKTGNDIGKEDVMRELRSYDETD----------TSKLPLVENL-RE--RYP 592 (1397)
Q Consensus 526 ~Pg~~v~l~V~a~p~S~v~L~aVD~sVllL~~~~~lt~~~v~~~l~~y~~~~----------~~~~~~~~~~-~~--~~p 592 (1397)
+||++++|+|+|+|+|+|||+||||||++|+++|+||+++||+.|+.|+.++ .+|.+....| ++ |+|
T Consensus 555 ~Pg~~v~L~v~a~p~s~vgL~aVDksV~lL~~~~~Lt~~~V~~~l~~~d~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~p 634 (1451)
T 4acq_A 555 LPASHAHLRVTAAPQSVCALRAVDQSVLLMKPDAELSASSVYNLLPEKDLTGFPGPLNDQDNEDCINRHNVYINGITYTP 634 (1451)
T ss_dssp TTCSCCBCCEECSTTCEEEEEEEEHHHHHHSCCSGGGSHHHHHTCSCCCCCSCCCSSCCTTCSCCSTTSCCCBCSSSCBC
T ss_pred CCCCeEEEEEEECCCCEEEEEEEehhhhhcCCCCCCCHHHHHHhhhhcccccccCCcccccccCCccccccccccceecc
Confidence 9999999999999999999999999999999999999999999999888531 2455443333 22 344
Q ss_pred ----CCcchhhHhhhcCeEEEecccccccCccccc---ccCCC---CCCCcccchhhc--cc-cccccccccceecccCc
Q psy5522 593 ----GSFTAQATFEKAGAIVMTNGYVHERNPWVYY---KSLND---PPDDMLDGEEQL--LS-QVTTSVTQLTVRKHFPE 659 (1397)
Q Consensus 593 ----~~~d~~~~f~~~Gl~v~Tn~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~--~~-~~~~~~~~~~vR~~FpE 659 (1397)
++.|.+++|+++||+++||+.+++|..|... ..... +.++.....+.. .. ........+.+|++|||
T Consensus 635 ~~~~~~~d~~~~f~~~Gl~~~tn~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vR~~Fpe 714 (1451)
T 4acq_A 635 VSSTNEKDMYSFLEDMGLKAFTNSKIRKPKMCPQLQQYEMHGPEGLRVGFYESDVMGRGHARLVHVEEPHTETVRKYFPE 714 (1451)
T ss_dssp CCCCCCBCHHHHHHHHTEEECCSSCCSCSCCC---------------------------------------CCCSCCCCS
T ss_pred cccCCCCcHHHHHHhhCCEEEecCCCCCCccCccccccccccccccccccccchhhcccccccccccccccCcccccCCC
Confidence 4689999999999999999999888666321 00000 000000000000 00 00011345789999999
Q ss_pred ceeEEEEEeccCceEEEEEEcCCccccEEEEEEEEeCCCceeeeeCCeeEEEeeeEEEEecCCceeeeCCEEEEEEEEEc
Q psy5522 660 TWLFQMEETGFDGKVMVNEKVPDSITSWVLSAFSVDSLYGLGLMDMPKKLRVFRPFFISLDLPYSVMRGEVVAIPVVVFN 739 (1397)
Q Consensus 660 TwiW~~~~~~~~G~a~v~~tvPDtiT~W~~~Afa~s~~~G~G~a~~~~~l~vfkpffv~l~LPysv~rGE~~~l~~~VfN 739 (1397)
||+|+++.+|++|+++++++|||+||+|+++|||++++.|||++ +|.+++|+|||||+++|||||+|||++.|+++|||
T Consensus 715 twlW~~v~~~~~G~a~~~~~lPDsiTtwrv~Ava~s~~~g~G~a-~~~~v~v~kpf~v~~~LP~sv~rGE~~~l~~~V~N 793 (1451)
T 4acq_A 715 TWIWDLVVVNSAGVAEVGVTVPDTITEWKAGAFCLSEDAGLGIS-STASLRAFQPFFVELTMPYSVIRGEAFTLKATVLN 793 (1451)
T ss_dssp EEEEEEEECBTTEECCBCCCCSSCCSCEEEEEEEEETTTEEEEE-EEEEECCBCSEEEEEECCSEEESSSCEEEEEEEEE
T ss_pred ceEeeeEEcCCCCeEEEEEECCCCCcEEEEEEEEEcCCCCeEee-cceEEEEECCEEEEccCCceEecCCEEEEEEEEEe
Confidence 99999999999999999999999999999999999998999999 48999999999999999999999999999999999
Q ss_pred CCCccEEEEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeEEEEEEEeceeeeEEEEEEEEeCC-----
Q psy5522 740 YLSQDLVADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNL----- 814 (1397)
Q Consensus 740 yl~~~~~v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~p~~lG~v~itV~A~~~~----- 814 (1397)
|+++|++|+|+|..++++++.+..+ ..+++||++++++++.|+|+|.++|.++|+|+|.+..
T Consensus 794 ~~~~~~~v~V~l~~~~~~~~~~~~~-------------~~~~v~l~~~~~~~v~f~v~p~~~G~~~i~v~a~~~~~~~~~ 860 (1451)
T 4acq_A 794 YLPKCIRVSVQLEASPAFLAVPVEK-------------EQAPHCICANGRQTVSWAVTPKSLGNVNFTVSAEALESQELC 860 (1451)
T ss_dssp CSSSCEEEEEEECCCTTEEEEESCS-------------CCCCEEECTTEEEEEEEEEEECSCEEEEEEEEEEECTTCCCS
T ss_pred ccCccEEEEEEEEcCCCeEeecCCC-------------CceEEEECCCCeEEEEEEEEECccceEEEEEEEEEccCcccc
Confidence 9999999999999999998864321 1468999999999999999999999999999998754
Q ss_pred -----------CCceeEEEEEecCCCeeeEEEEEEEEecCCCceeEEEEEecCCCCcCCCCcEEEEEEEcccccCcccCc
Q psy5522 815 -----------AGDSMEGKLLVKPEGETQYKNKAIFVDLRKNKTFSVNVTLDMPKNIVPGSEHVEVSAVGDLLGPSIPNL 883 (1397)
Q Consensus 815 -----------~~D~v~k~L~V~peG~~~~~t~s~~l~~~~~~~~~~~i~l~~P~~~v~gs~~~~vsv~gd~l~~~~~~l 883 (1397)
.+|+++|+|+|+|||++++.+++.+||+++. ..++++++.+|.+++|||.+++|++.|++++.++++|
T Consensus 861 ~~~~~~~~~~~~~D~v~k~L~V~peg~~~~~~~~~~l~~~g~-~~~~~~~~~~p~~~vpgs~~~~vsv~g~~~~~~~~~l 939 (1451)
T 4acq_A 861 GTEVPSVPEHGRKDTVIKPLLVEPEGLEKETTFNSLLCPSGG-EVSEELSLKLPPNVVEESARASVSVLGDILGSAMQNT 939 (1451)
T ss_dssp SSSCCCCCSSCCCEEEEEEEEEECSSEEEEEECCEEECCSSE-EEEEEECCCCCTTBCTTCCEEEEEECCCCCCSTTTTG
T ss_pred ccccccccccccceEEEEEEeccCCceeEEEEEEEEEecCCC-cceEEEeccCchhcCCCCccEEEEEeCcchHHHHHhH
Confidence 6899999999999999999999999999763 5678889999999999999999999999999999999
Q ss_pred chhhccCCCchhhhhcccchHHHHHHHHHHhccccHHHHHHHHHHHHhccccceeeecCCCCccccCCCC--CCCCcchh
Q psy5522 884 ANLIKMPFGCGEQNMLNFVPNIVVLEYLKKTYQLTDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTD--PNGSTWLT 961 (1397)
Q Consensus 884 ~~Ll~~P~GCgEQ~m~~~~p~i~~l~yL~~~~~l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~--~~~s~wlT 961 (1397)
++|++|||||+||||++|+|++|+++||+.++|++++++++|+++|+.||+|++.||++||||++|+.++ ..+++|||
T Consensus 940 ~~L~~yPyGC~EQ~ms~~~P~l~~~~yL~~t~q~~~~~~~~a~~~i~~g~~~ll~~q~~dGgf~~f~~~~~~~~~s~wlT 1019 (1451)
T 4acq_A 940 QNLLQMPYGCGEXNMVLFAPNIYVLDYLNETQQLTPEIKSKAIGYLNTGYQRQLNYKHYDGSYSTFGERYGRNQGNTWLT 1019 (1451)
T ss_dssp GGGCCCCCSSTTTTHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHGGGBCTTSCBCSSTTGGGCCCCCHHHH
T ss_pred HHHHhCCCCchhhhhhhhhhHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhhcCCCCCeeeccCCCCCCCCchhHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999997643 57899999
Q ss_pred HHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchHhHHHhhcCCCCccEEEEEEEEeccccceeEEEEeeee
Q psy5522 962 AFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGKVSHADMQGGAAKGLALTAYTLLPKKTRAVNMTATGSG 1041 (1397)
Q Consensus 962 Ayvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqdvl~al~~~~~~~~v~lt~~v~lp~~~~~~~v~~~G~G 1041 (1397)
|||+++|.+|++++.||+..++++++||.++|+++|||.+.+.+++..|+++.+.++.+|+++++
T Consensus 1020 Ayv~~~l~~a~~~~~v~~~~l~~a~~wL~~~Q~~dG~f~~~g~~~~~~m~gg~~~~~~lTAyvl~--------------- 1084 (1451)
T 4acq_A 1020 AFVLKTFAQARAYIFIDEAHITQALIWLSQRQKDNGCFRSSGSLLNNAIKGGVEDEVTLSAYITI--------------- 1084 (1451)
T ss_dssp HHHHHHHHHHTTTSCCCTHHHHHHHHHHHHTEETTTEECCCCCCSCGGGCCSCSCHHHHHHHHHH---------------
T ss_pred HHHHHHHHHhhhhcccCHHHHHHHHHHHHhhcccCCcccccCcccchhhcCCCCCCccchHHHHH---------------
Confidence 99999999999999999999999999999999999999988888888888887777888998777
Q ss_pred EEEEEEEEEEeeccCCCCCceeeccccccCCCCCceEEEEEEeecCCCCccEEEEEecCCcccccCCCCchhhcccCcee
Q psy5522 1042 FAVVYISYQYNINVTGAWPMFTLDPQVDKNSDSNHLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALPSLQVSQNVK 1121 (1397)
Q Consensus 1042 ~~~~q~~~~Yn~~~~~~~~~f~l~v~~~~~~~~~~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~ 1121 (1397)
||+|.
T Consensus 1085 ----------------------------------------------------aL~~~----------------------- 1089 (1451)
T 4acq_A 1085 ----------------------------------------------------ALLEI----------------------- 1089 (1451)
T ss_dssp ----------------------------------------------------HHHHT-----------------------
T ss_pred ----------------------------------------------------HHHHc-----------------------
Confidence 77776
Q ss_pred EEEEeCCeEEEEEEeeecCCccceeeecccccccchhhHHHHHHHHHhhcCCCCc------hHHHHHHHHHHhhCCCCch
Q psy5522 1122 RVETKNGNTMVVLYFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYIVKNLAGTED------AYAIAICSYALHLAQHPVK 1195 (1397)
Q Consensus 1122 ~~e~~~~~~~v~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~------~y~~al~aYal~la~~~~~ 1195 (1397)
+. +. .++++++|+.||+++++++.+ +|++||+||||+|+|++++
T Consensus 1090 ------g~----------~~--------------~~~~i~~A~~~L~~~~~~~~~~~~~~~~y~~AllAyAlal~g~~~~ 1139 (1451)
T 4acq_A 1090 ------PL----------TV--------------THPVVRNALFCLESAWKTAQEGDHGSHVYTKALLAYAFALAGNQDK 1139 (1451)
T ss_dssp ------TC----------CT--------------TCHHHHHHHHHHHHHHHHHTSSCSSSTHHHHHHHHHHHHHHTCHHH
T ss_pred ------CC----------CC--------------CCHHHHHHHHHHHHhhhhcccccccCChHHHHHHHHHHHhcCChhH
Confidence 32 22 567899999999998776655 9999999999999999876
Q ss_pred H-HHHHHHhhcccccCCcccccccCCCCCCCCCC-CCCCCcccchhhHHHHHHhhccC------Ccccchhhhhhhhhcc
Q psy5522 1196 D-VAFNLLESKAHNEDGKKWWKRAERPEDKKNPW-AQVPNSVDVEMTSYALLSYLDRG------LVEDTLPILTWLVTQQ 1267 (1397)
Q Consensus 1196 ~-~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~-~~~~~s~~vE~t~Y~lL~~~~~~------~~~~a~~i~~Wl~~q~ 1267 (1397)
. .+|++|+++|+.++|.+||+++..+.....+| ++++++.+||+|||||||+|..+ |+++|.+|++||++||
T Consensus 1140 ~~~~l~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~~~~~~s~~vE~TayaLLall~~~~~~~~~d~~~a~~iv~WL~~qr 1219 (1451)
T 4acq_A 1140 RKEVLKSLNEEAVKKDNSVHWERPQKPKAPVGHFYEPQAPSAEVEMTSYVLLAYLTAQPAPTSEDLTSATNIVKWITKQQ 1219 (1451)
T ss_dssp HHHHHHHHHHHCCBCSSCBCCCCCCCSSSCSSSTTCCCTTGGGGTHHHHHHHHHHCCSSCCCHHHHHHHHTTHHHHTTCC
T ss_pred HHHHHHHHHHHhhccCCceecCCCCCCccccccccccCCchHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHcC
Confidence 4 49999999999999999999876544333333 44778999999999999999874 7889999999999999
Q ss_pred cCCCCccccccCCCccccceeccccccccccCceeEEEeeccccchhheeeeccccccccccccCCCCCCccchhHHHHH
Q psy5522 1268 NDQGGFASTQMSKKELCPTVSAFRTHKVAQQKPVPVSIYDYYDQSRRARMFYEPRVATLCDICEGEDCSKDTVIGLYALA 1347 (1397)
Q Consensus 1268 n~~Ggf~stQdT~~~~c~~~~~~~~~~v~~~~p~~v~~ydyy~~~~~~~~~y~~~~~~~c~~c~~~~c~~~~~~~~~~~~ 1347 (1397)
|++|||+||||| ++|||||+
T Consensus 1220 ~~~Ggf~STQdT------------------------------------------------------------v~aL~ALa 1239 (1451)
T 4acq_A 1220 NAQGGFSSTQDT------------------------------------------------------------VVALHALS 1239 (1451)
T ss_dssp CTTSCCSSHHHH------------------------------------------------------------HHHHHHHH
T ss_pred CCCCCcccHHHH------------------------------------------------------------HHHHHHHH
Confidence 999999999999 99999999
Q ss_pred HHhhhhccCCCcEEEE-EEeCCCceeeEEEeCCCceEEEeecccccccC
Q psy5522 1348 QLAEKVLARNNDVSIS-FKYLNGQSSEMSVNRLNNMILQKNEVYEFHAS 1395 (1397)
Q Consensus 1348 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~n~~~~q~~~~~~~~~~ 1395 (1397)
+|++++++.+.+++|+ |++..++...|+||++|++++|+.+||++|+.
T Consensus 1240 ~Y~~~~~~~~~~~~v~~v~~~~~~~~~~~v~~~n~~~~q~~~l~~~~~~ 1288 (1451)
T 4acq_A 1240 KYGAATFTRTGKAAQVTIQSSGTFSSKFQVDNNNRLLLQQVSLPELPGE 1288 (1451)
T ss_dssp HHHHHHCCSSCCCCEEEEEESSSCCEEECCCTTTTTBCEEEECCCSSSC
T ss_pred HHHHhcCCCCCceEEEEEEcCCCCcEEEEECCCccceEEEEEccCCCce
Confidence 9999999988888888 98877788899999999999999999988764
No 2
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=100.00 E-value=2e-189 Score=1914.23 Aligned_cols=1151 Identities=24% Similarity=0.366 Sum_probs=708.5
Q ss_pred CEEEEeeCeeecCCeEEEEEEeecCCccEEEEEEEEeecCCCCeeEEeEEEEECC--CceeEEEEEcCCC--CCc---ee
Q psy5522 1 YYTVVAPKVLRPNGEYHVAVSTQAVSEATQVSVEVGGKQDSGGEFRTKQLLSVDP--FSTRIVKLDIGDL--GPG---QY 73 (1397)
Q Consensus 1 ~y~v~~P~~lr~g~~~~v~v~l~~~~~~v~v~v~L~~~~~~~~~~~~~~~~~~~~--~~~~~~~f~vP~~--~~~---~~ 73 (1397)
+|+|++|++||+|++|+|||++++.+++++|+++|+..+.. ......+.+.+++ +++.|++|+||.. .++ .+
T Consensus 24 ~y~v~~P~~lr~g~~e~v~v~l~~~~~~v~v~v~l~~~~~~-~~~~~~~~v~l~~~~~~~~~~~~~ip~~~~~~~~~~~~ 102 (1642)
T 3prx_B 24 LYTLITPAVLRTDTEEQILVEAHGDSTPKQLDIFVHDFPRK-QKTLFQTRVDMNPAGGMLVTPTIEIPAKEVSTDSRQNQ 102 (1642)
T ss_dssp EEEEEEESEEETTSCEECEEEEESCCSCEEEEEEEEETTTC-CSEEEEEEEEECTTTTTEECCEECCCGGGCCCCTTSCC
T ss_pred cEEEEECCeEECCCceEEEEEEeCCCCCEEEEEEEEeCCCC-ceEEEEEEEEeccCCCcEEEEEEEcCCCccCCCccccE
Confidence 49999999999999999999999999999999999854332 1233334454543 5568999999943 222 24
Q ss_pred EEEEEecCceeeEeeEEEEEEecccEEEEEcCCCcccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeec
Q psy5522 74 NLTVKGSGSLNFYNSTGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRAL 153 (1397)
Q Consensus 74 ~l~v~g~~~~~f~~~~~v~~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~ 153 (1397)
.|.|++.+ -.|.++++|+++.+++++|||||||||||||||+||++++|.+++|. +.++.|+|.||+|++|.||.. .
T Consensus 103 ~v~v~~~~-~~~~~~k~V~v~~~~~~~FiqTDk~iYrPGqtV~~rvi~~~~~~~p~-~~~~~v~i~dP~g~~i~~~~~-~ 179 (1642)
T 3prx_B 103 YVVVQVTG-PQVRLEKVVLLSYQSSFLFIQTDKGIYTPGSPVLYRVFSMDHNTSKM-NKTVIVEFQTPEGILVSSNSV-D 179 (1642)
T ss_dssp EEEEEEEE-TTEEEEEEEEEECCCCCEEEEESCSEECTTCEEEEEEEECCC------CCCEEEEEECSSCCEEEEEEE-C
T ss_pred EEEEEEEe-CCceEEEEEEEEcCCCeEEEEcCCCcCCCCCEEEEEEEEEcCCCccc-CceEEEEEECCCCCEEEEEEe-c
Confidence 45555532 23688999999999999999999999999999999999999999997 889999999999999999974 3
Q ss_pred cCCceeeeeeecCCCCCCeeEEEEEEEcC--eEEEEEEEEeeecCCcEEEEEeCCCceE-ee-CCeEEEEEEEEEecCcc
Q psy5522 154 TTRGVFSADLQLSKSPVLGDWNITINVLD--QKFTKRFTVAEYVLPKFEVNVNVPPHAT-FK-DSKVVISVNAKYTYGKP 229 (1397)
Q Consensus 154 ~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~--~~~~~~F~VeEYvLPkFeV~v~~p~~i~-~~-~~~~~v~v~AkYtyGkP 229 (1397)
.. ++++|+||++|++|.|+|++..++ ...+++|+|||||||+|||++++|+.++ +. ++++.++|||+|+||+|
T Consensus 180 ~~---~~~~f~L~~~~~~G~w~I~v~~~~~~~~~~~~F~VeeYvlP~FeV~v~~~~~~~~~~~~~~~~v~V~ArY~yGkP 256 (1642)
T 3prx_B 180 LN---FFWPYNLPDLVSLGTWRIVAKYEHSPENYTAYFDVRKYVLPSFEVRLQPSEKFFYIDGNENFHVSITARYLYGEE 256 (1642)
T ss_dssp TT---CCCEEECCSSCCCEEEEEEEEETTEEEEEEEEEEECSCCCCSEEEEEEESSSEEETTSCCCEEEEEEEEETTSCB
T ss_pred cc---ceEEEEcCCCCCceeEEEEEEeCCCCcEEEEEEEEEEEecCcEEEEEeccceeEEecCCCeEEEEEEEEeCCCCc
Confidence 33 999999999999999999999876 4788999999999999999999998765 44 78999999999999999
Q ss_pred ccceEEEEEEeccccCccccccccceeE--EeecCceEEEEEechh---hhccc-cccceEEEEEEEEE-ECCcceEEee
Q psy5522 230 VKGEATITAYPTIFSGVIQPLFQTPVRK--VVPIDGKTVIEFDVVK---ELQLT-DEYERNIHFDVAVE-EALTGRRQNN 302 (1397)
Q Consensus 230 V~G~v~v~v~~~~~~g~~~~~~~~~~~~--~~d~~G~~~~~~~~~~---~~~~~-~~~~~~l~V~a~Vt-E~gTG~~~~~ 302 (1397)
|+|++++++|+..+ + ....++..++. .+|.+||++ |+... .+... ..+.++++|+|+|+ |+|||.+.++
T Consensus 257 V~G~v~v~fg~~~~-~-~~~~~~~~l~~~~~~dg~G~~~--~~~~~~~~~~~~~~~~~~~~l~V~atV~eE~gg~~~~~~ 332 (1642)
T 3prx_B 257 VEGVAFVLFGVKID-D-AKKSIPDSLTRIPIIDGDGKAT--LKRDTFRSRFPNLNELVGHTLYASVTVMTESGSDMVVTE 332 (1642)
T ss_dssp CCEEEEEEEEEEET-T-EEEECGGGCEEEEEBTTEEEEE--ECHHHHHHHCCCGGGTSSEEEEEEEEEEETTSSCEEEEE
T ss_pred eeeeEEEEEEeccC-C-CccccccccceeEEecCcEEEE--EehhhhcccccccccccceEEEEEEEEEEeCCCCEEEee
Confidence 99999999987532 1 11234443433 344455555 44432 12221 12357899999998 7787777778
Q ss_pred EEEEEEEEeeeEEEEEecCCcccCCCeEEEEEEEEccCCCccCCCCceEEEEEeeeccccccceeeEeeCCCeeEEEEEe
Q psy5522 303 TGSVVFHKHKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGMIKLVYY 382 (1397)
Q Consensus 303 ~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~~~f~i~ 382 (1397)
...++|+.++|+|+|.+++.+||||+||.++|+++++||+|+++ ..|.+.. ...+++||++|++.|+|+
T Consensus 333 ~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dg~P~~~--~~V~v~~---------~~~~~tTd~~G~a~f~i~ 401 (1642)
T 3prx_B 333 QSGIHIVASPYQIHFTKTPKYFKPGMPYELTVYVTNPDGSPAAH--VPVVSEA---------FHSMGTTLSDGTAKLILN 401 (1642)
T ss_dssp EEEEEEESCSCEEECTTSCSEECTTSCEEEEEEEECTTSCBCCS--CEEEEGG---------GTEEEECCTTSEEEEEEC
T ss_pred eeeEEEEecceEEEEEeCccccCCCCCEEEEEEEECCCCCCCCC--ceEEEEe---------ccceeeeCCCceEEEEEE
Confidence 88999999999999999999999999999999999999999994 3454421 125789999999999999
Q ss_pred CCCCCceeEEEEEEEecCc-------ceEEEEEEeecCC--CCCeEEEEecCCCCCCCCeEEEEEEe--c----CCcceE
Q psy5522 383 PPANENVTTLGIEAEYLDI-------KEWFSTISASESP--SNSFIQAALLTQNPKVNKDVELEINS--T----APLKYI 447 (1397)
Q Consensus 383 ~~~~~~~~~l~l~a~~~~~-------~~~~~~v~~~~S~--s~s~L~i~~~~~~~~~G~~~~v~v~s--~----~~~~~~ 447 (1397)
++.+... ++|+|++++. ..+.+++.+++|+ |++||+|.++.++++||+++.|.+.. + .++.+|
T Consensus 402 t~~~~~~--l~i~~~~~~~~~~~~~~a~~~~~~~~y~s~~~S~syL~I~~~~~~l~~G~~~~v~~~~~~~~~~~~~i~~f 479 (1642)
T 3prx_B 402 IPLNAQS--LPITVRTNHGDLPRERQATKSMTAIAYQTQGGSGNYLHVAITSTEIKPGDNLPVNFNVKGNANSLKQIKYF 479 (1642)
T ss_dssp CCTTCCC--CEEEEECCCTTSCTTTSCEEEEECEECCCGGGCCCEEEEEECCCSBCTTCEEEEEEEEECCHHHHTTCCEE
T ss_pred CCCCCcE--EEEEEEEccCCCCcccccceEEEEEEecCCCCCCCcEEEEccCcccCCCCeEEEEEEEecCcccccccceE
Confidence 9865555 7778887653 2456667778887 99999999999999999999887653 2 466679
Q ss_pred EEEEEeCCeEEEEEEEEecCCceeEEEEEeeCCCCCceeEEEEEEEecCCeEEEEeEEEEEcccccceeeEEecCCCCCC
Q psy5522 448 SYQVLGRGDVIMADTITVPGNKMSTVIRFLATYAMAPTAHVIVQYVREDGEVVADGLDLELEGGLQNFVSANVSPDETEP 527 (1397)
Q Consensus 448 ~ylV~srG~Iv~~~~~~~~~~~~~~~~~l~vt~~maP~a~l~vy~v~~~gevvads~~~~V~~~f~nkV~l~~s~~~~~P 527 (1397)
+|+|++||+|+.+|++....+++.++|+|+++++|+|.|||+|||++++||+||||++|+|++.|.|+|+|++++++++|
T Consensus 480 ~YlV~srG~Iv~~g~~~~~~~~~~~s~~l~vt~~maP~arllvYyi~~~gEvVaDSv~~~V~~~c~~kv~l~~~~~~~~P 559 (1642)
T 3prx_B 480 TYLILNKGKIFKVGRQPRRDGQNLVTMNLHITPDLIPSFRFVAYYQVGNNEIVADSVWVDVKDTCMGTLVVKGDNLIQMP 559 (1642)
T ss_dssp EEEEEETTEEEEEEEEECCTTCSEEEEEEECCGGGCSEEEEEEEEEETTTEEEEEEEEEEBCCCCSSCEEEECCCSCBCT
T ss_pred EEEEEeCCcEEEeeEEEeccCCcEEEEEEEcCcccCccEEEEEEEEeCCCeEEEEEEEEeeeecccceEEEecCcccCCC
Confidence 99999999999999985545567899999999999999999999999999999999999999544789999988899999
Q ss_pred CceEEEEEEecCCcEEEEEEEeeecccccCCCCCChhHHhHhccccCCCCCCCCccccccccccCCCcchhhHhhhcCeE
Q psy5522 528 GSNIQINLEAKPNSYIGLLAVDQKVLLLKTGNDIGKEDVMRELRSYDETDTSKLPLVENLRERYPGSFTAQATFEKAGAI 607 (1397)
Q Consensus 528 g~~v~l~V~a~p~S~v~L~aVD~sVllL~~~~~lt~~~v~~~l~~y~~~~~~~~~~~~~~~~~~p~~~d~~~~f~~~Gl~ 607 (1397)
|++++|+|+|+|+|+|||+||||||++|+++++||+++||+.|+.|+.+|. .+ ++.|.+++|+++||.
T Consensus 560 g~~v~L~v~a~p~S~vgL~aVDksV~lL~~~~~Lt~~~V~~~le~~d~gc~---------~g---~g~d~~~vF~~aGL~ 627 (1642)
T 3prx_B 560 GAAMKIKLEGDPGARVGLVAVDKAVYVLNDKYKISQAKIWDTIEKSDFGCT---------AG---SGQNNLGVFEDAGLA 627 (1642)
T ss_dssp TCEEEEEEEESTTCEEEEEEEEHHHHHHTTTTSCCHHHHHHHHHTTCCCCS---------SB---CCSSHHHHHHHTTEE
T ss_pred CCeEEEEEEeCCCCEEEEEEeeehhhhcCCcCcCCHHHHhhhhcccccCCC---------CC---CCcchhhhhhhCCcE
Confidence 999999999999999999999999999999999999999999999998863 11 578999999999999
Q ss_pred EEecccccccC----ccccc------ccC-----------CCC--------CCCcccchh-------------------h
Q psy5522 608 VMTNGYVHERN----PWVYY------KSL-----------NDP--------PDDMLDGEE-------------------Q 639 (1397)
Q Consensus 608 v~Tn~~~~~~~----~~~~~------~~~-----------~~~--------~~~~~~~~~-------------------~ 639 (1397)
++||+.+.++. .|... ++. .+. .+|+....+ .
T Consensus 628 ~~Tn~~~~~~~~~~~~C~~~~~~r~~r~~~~~~~~~~~~~~y~~~~~~~cc~~g~~~~~~~~~c~~r~~~~~~~~~c~~a 707 (1642)
T 3prx_B 628 LTTSTNLNTKQRSAAKCPQPANRRRRSSVLLLDSNASKAAEFQDQDLRKCCEDVMHENPMGYTCEKRAKYIQEGDACKAA 707 (1642)
T ss_dssp EEETTSCBCCCCCCSSCCC-------------------------------------------------------------
T ss_pred EEecCCcCcccccccCCCcccccccccchhhhhhhhhhhhhcccchhcchhccccccCccccchhhhhhcccCchhHHHH
Confidence 99999886553 23110 000 000 011100000 0
Q ss_pred c----------------------cccc--cc--cccccceecccCcceeEEEEEe----ccCc--eEEEEEEcCCccccE
Q psy5522 640 L----------------------LSQV--TT--SVTQLTVRKHFPETWLFQMEET----GFDG--KVMVNEKVPDSITSW 687 (1397)
Q Consensus 640 ~----------------------~~~~--~~--~~~~~~vR~~FpETwiW~~~~~----~~~G--~a~v~~tvPDtiT~W 687 (1397)
. .... .. ....+.+|++|||||||+++.+ |++| +++++++|||+||+|
T Consensus 708 f~~cc~~~~~~~~~~~~~~~~~l~r~~~~~~~~~~~~~~vR~~FpETWlW~~~~~~~~~d~~G~~~~~~~~~lPDsITtW 787 (1642)
T 3prx_B 708 FLECCRYIKGVRDENQRESELFLARDDNEDGFIADSDIISRSDFPKSWLWLTKDLTEEPNSQGISSKTMSFYLRDSITTW 787 (1642)
T ss_dssp ----------------------------CCSSCCTTTCCCBCCCCSEEEEEEEECCSCCCTTSCEEEEEEEECCSCCSEE
T ss_pred HHHHhhhhhhccccccccccccccccccccccccccccchhhcCCcceEEeeeecccccccCCcceEEEEEeCCCcccEE
Confidence 0 0000 00 0124679999999999999976 5667 999999999999999
Q ss_pred EEEEEEEeCCCceeeeeCCeeEEEeeeEEEEecCCceeeeCCEEEEEEEEEcCCCccEEEEEEEeecCCeeeeecCCCcc
Q psy5522 688 VLSAFSVDSLYGLGLMDMPKKLRVFRPFFISLDLPYSVMRGEVVAIPVVVFNYLSQDLVADVTLENVGQFDFADFSNEVD 767 (1397)
Q Consensus 688 ~~~Afa~s~~~G~G~a~~~~~l~vfkpffv~l~LPysv~rGE~~~l~~~VfNyl~~~~~v~v~L~~s~~~~~~~~~~~~~ 767 (1397)
+++|||++++.|||++ +|.+++|||||||+++|||||+|||++.|+++||||+++|++|+|+|..+++|++....+
T Consensus 788 ~i~A~a~s~~~G~Gva-~~~~i~v~kpffv~l~LPysv~rGEq~~l~v~VfNy~~~~~~V~V~L~~s~~~~~~~~~~--- 863 (1642)
T 3prx_B 788 VVLAVSFTPTKGICVA-EPYEIRVMKVFFIDLQMPYSVVKNEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKG--- 863 (1642)
T ss_dssp EEEEEEECSSSCEEEC-BCEEEEBCCSEEEECCCCSCEETTCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSS---
T ss_pred EEEEEEEcCCCCeeec-cceEEEEECCEEEEccCCCEEecCCEEEEEEEEEcCCCCcEEEEEEEEcCCCeEeeccCC---
Confidence 9999999998999999 689999999999999999999999999999999999999999999999999998753211
Q ss_pred CCCCCCcceeeeEEEEEeCCCeeEEEEEEEeceeeeEEEEEEEEeC--CCCceeEEEEEecCCCeeeEEEEEEEEecCC-
Q psy5522 768 AAPQPKFEVFRRKKLTIKANSGSTTTFVITPKELGYIGIKVTATSN--LAGDSMEGKLLVKPEGETQYKNKAIFVDLRK- 844 (1397)
Q Consensus 768 ~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~p~~lG~v~itV~A~~~--~~~D~v~k~L~V~peG~~~~~t~s~~l~~~~- 844 (1397)
...+++++|+++++++++|+|+|+++|.++|+|+|.+. ..+|+++|+|+|+|||++++.+++.+||+++
T Consensus 864 --------~~~~q~v~v~a~~~~~v~f~i~p~~~G~~~i~v~A~~~~~~~~D~v~k~L~V~peg~~~~~~~~~~l~~~~~ 935 (1642)
T 3prx_B 864 --------QRYRQQFPIKALSSRAVPFVIVPLEQGLHDVEIKASVQEALWSDGVRKKLKVVPEGVQKSIVTIVKLDPRAK 935 (1642)
T ss_dssp --------SCCEEEEEECSSEEEEEEEEEEECSCEEEEEEEEEEESSSSCEEEEEEEEEEECSSEEEEEEEEEEECTTTT
T ss_pred --------CcceeEEEECCCCeEEEEEEEEEeecccEEEEEEEEecCCCccceEEEEEEEecCCccEEEEEEEEEcCCcc
Confidence 12367899999999999999999999999999999875 4789999999999999999999999999974
Q ss_pred --CceeEEEEEecCCCCcCCCCcE-EEEEEEcccccCcc------cCcchhhccCCCchhhhhcccchHHHHHHHHHHhc
Q psy5522 845 --NKTFSVNVTLDMPKNIVPGSEH-VEVSAVGDLLGPSI------PNLANLIKMPFGCGEQNMLNFVPNIVVLEYLKKTY 915 (1397)
Q Consensus 845 --~~~~~~~i~l~~P~~~v~gs~~-~~vsv~gd~l~~~~------~~l~~Ll~~P~GCgEQ~m~~~~p~i~~l~yL~~~~ 915 (1397)
++..+.++++.+|++++|||.+ +.|++.||+||+++ ++|++|++||||||||||++|+||+|+++||+.++
T Consensus 936 ~~~~~~~~~i~~~~p~~~vpgS~~~~~vsv~gd~lg~~i~~~l~~~~L~~Ll~~PyGCgEQnms~~~P~v~v~~yL~~t~ 1015 (1642)
T 3prx_B 936 GVGGTQLEVIKARKLDDRVPDTEIETKIIIQGDPVAQIIENSIDGSKLNHLIITPSGCGEQNMIRMAAPVIATYYLDTTE 1015 (1642)
T ss_dssp CSSSEEEEEECCCCCCSBCTTCCEEEEEEEEEEC----------------------------------------------
T ss_pred cCCcceeEEEecccccccCCCCcccEEEEEEcccchhhhhcccchhhHHHHHhcCCCcHHHHHHHHHHHHHHHHHHhhhc
Confidence 2356778899999999999997 89999999999999 69999999999999999999999999999999999
Q ss_pred ccc---HHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCCcchhHHHHHHHHHccCCCc-cCHHHHHHHHHHHHh
Q psy5522 916 QLT---DAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFRQAASHTT-IDESVILEALAWLSS 991 (1397)
Q Consensus 916 ~l~---~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl~~~~~a~~~i~-vd~~~~~~~~~WL~~ 991 (1397)
|++ ++++++|.++|++||||+|+||++|||||+|+++ .+|+||||||+++|.+|+++++ ||+.+++++++||.+
T Consensus 1016 q~~~~~~e~~~ka~~~i~~Gyqr~l~yq~~DGsfs~w~~~--~~stWLTAyV~k~f~~A~~~i~~Vd~~~l~~~~~wL~~ 1093 (1642)
T 3prx_B 1016 QWETLGINRRTEAVNQIVTGYAQQMVYKKADHSYAAFTNR--ASSSWLTAYVVKVFAMAAKMVAGISHEIICGGVRWLIL 1093 (1642)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccChhHHHHHHHHHHHHHHHHHHhcCCCCCeecCCCC--CCccccHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 986 6889999999999999999999999999999874 6899999999999999999998 999999999999987
Q ss_pred -cccCCCccccchHhHHHhhcCCC---CccEEEEEEEEeccccceeEEEEeeeeEEEEEEEEEEeeccCCCCCceeeccc
Q psy5522 992 -NQAVNGSFPEVGKVSHADMQGGA---AKGLALTAYTLLPKKTRAVNMTATGSGFAVVYISYQYNINVTGAWPMFTLDPQ 1067 (1397)
Q Consensus 992 -~q~~~G~F~stqdvl~al~~~~~---~~~v~lt~~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~~~~~~f~l~v~ 1067 (1397)
+|++||||.+.+.++|..|+|++ +.++.||||+++
T Consensus 1094 ~~Q~~dG~F~e~~~v~~~~m~Gg~~~~~~~~~lTA~vli----------------------------------------- 1132 (1642)
T 3prx_B 1094 NRQQPDGAFKENAPVLSGTMQGGIQGAEEEVYLTAFILV----------------------------------------- 1132 (1642)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hccCCCCcccccccccchhccCCccCCCCcccchHHHHH-----------------------------------------
Confidence 89999999999999998899865 457999999998
Q ss_pred cccCCCCCceEEEEEEeecCCCCccEEEEEecCCcccccCCCCchhhcccCceeEEEEeCCeEEEEEEeeecCCccceee
Q psy5522 1068 VDKNSDSNHLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKRVETKNGNTMVVLYFAYHQVLPWTLM 1147 (1397)
Q Consensus 1068 ~~~~~~~~~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~~~e~~~~~~~v~lY~~~~~~~~~~~~ 1147 (1397)
||+|.+.+.+ +. ++.
T Consensus 1133 --------------------------aL~e~~~~~~------------------------~~---------~~~------ 1147 (1642)
T 3prx_B 1133 --------------------------ALLESKTICN------------------------DY---------VNS------ 1147 (1642)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------HHHhcccccc------------------------cc---------ccc------
Confidence 9999832100 11 122
Q ss_pred ecccccccchhhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCCCCchHHHHHHHhhcccccCCcccccccCCCCCCCCC
Q psy5522 1148 HYLVSKYPRMNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNP 1227 (1397)
Q Consensus 1148 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~~~~~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~ 1227 (1397)
.+.+++||+.||+++++++.++|++||+||||+||+++. .++|++|.+. +..||+++..
T Consensus 1148 --------~~~~i~~a~~~L~~~~~~~~~~Y~~Ai~aYAl~l~~~~~-~~~l~~l~~~-----~~~~W~~~~~------- 1206 (1642)
T 3prx_B 1148 --------LDSSIKKATNYLLKKYEKLQRPYTTALTAYALAAADQLN-DDRVLMAAST-----GRDHWEEYNA------- 1206 (1642)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------chHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHhcCCch-HHHHHHHHhc-----CCCCCCCCCC-------
Confidence 456899999999999999999999999999999999975 5567777543 6789987532
Q ss_pred CCCCCCcccchhhHHHHHHhhccCCcccchhhhhhhhhcccCCCCccccccCCCccccceeccccccccccCceeEEEee
Q psy5522 1228 WAQVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTHKVAQQKPVPVSIYD 1307 (1397)
Q Consensus 1228 ~~~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT~~~~c~~~~~~~~~~v~~~~p~~v~~yd 1307 (1397)
++++||||||||||+|..+++++|.|||+||++|||++|||+|||||
T Consensus 1207 -----~~~~VE~TaYaLLa~l~~~~~~~a~~iv~WL~~qr~~~Ggf~STQdT---------------------------- 1253 (1642)
T 3prx_B 1207 -----HTHNIEGTSYALLALLKMKKFDQTGPIVRWLTDQNFYGETYGQTQAT---------------------------- 1253 (1642)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----chHHHHHHHHHHHHHhccCchhhHHHHHHHHHHhccCCCcccCcHHH----------------------------
Confidence 57899999999999999999999999999999999999999999999
Q ss_pred ccccchhheeeeccccccccccccCCCCCCccchhHHHHHHHhhhhcc-CCCcEEEEEEeC-CCceeeEEEeCCCceEEE
Q psy5522 1308 YYDQSRRARMFYEPRVATLCDICEGEDCSKDTVIGLYALAQLAEKVLA-RNNDVSISFKYL-NGQSSEMSVNRLNNMILQ 1385 (1397)
Q Consensus 1308 yy~~~~~~~~~y~~~~~~~c~~c~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~q 1385 (1397)
++||||||+|+++++. ++.+++|+|++. .++...|+||++|+||+|
T Consensus 1254 --------------------------------vvaLqALa~Y~~~~~~~~~~~~~V~v~~~~~~~~~~~~v~~~N~~l~q 1301 (1642)
T 3prx_B 1254 --------------------------------VMAFQALAEYEIQMPTHKDLNLDITIELPDREVPIRYRINYENALLAR 1301 (1642)
T ss_dssp -------------------------------------------------CCCCEEEEEECTTCSSCEEEEESTTTSSCCE
T ss_pred --------------------------------HHHHHHHHHHHHhcCcCCCccEEEEEEeCCCCccEEEEECCcccceeE
Confidence 9999999999999998 678999999986 456789999999999999
Q ss_pred eeccccccc
Q psy5522 1386 KNEVYEFHA 1394 (1397)
Q Consensus 1386 ~~~~~~~~~ 1394 (1397)
+.+| ++|+
T Consensus 1302 ~~~l-~~~~ 1309 (1642)
T 3prx_B 1302 TVET-KLNQ 1309 (1642)
T ss_dssp EEEE-SSCC
T ss_pred EEEc-cCCC
Confidence 9999 4665
No 3
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.4e-165 Score=1695.05 Aligned_cols=1139 Identities=31% Similarity=0.551 Sum_probs=973.7
Q ss_pred EEEEeeCeeecCCeEEEEEEeecCCcc-EEEEEEEEeecCCCC-eeEEeEEEEECCCceeEEEEEcCC-CCCceeEEEEE
Q psy5522 2 YTVVAPKVLRPNGEYHVAVSTQAVSEA-TQVSVEVGGKQDSGG-EFRTKQLLSVDPFSTRIVKLDIGD-LGPGQYNLTVK 78 (1397)
Q Consensus 2 y~v~~P~~lr~g~~~~v~v~l~~~~~~-v~v~v~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~vP~-~~~~~~~l~v~ 78 (1397)
|+|++|++||+|++|+|||++++.+++ ++|+|+|++.+..+. .......++++++.++|++|+||. ...+.|.|.++
T Consensus 1 ~~i~aP~~~r~g~~~~v~v~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~l~~~ 80 (1325)
T 2pn5_A 1 LLVVGPKFIRANQEYTLVISNFNSQLSKVDLLLKLEGETDNGLSVLNVTKMVDVRRNMNRMINFNMPEDLTAGNYKITID 80 (1325)
T ss_dssp CEEEEESEECSSSEEEEEEEECCSSSSEEEEEEEEC------CTTCCEEEEEEEETTEEEEEEEECCSCCCSCCEEEEEE
T ss_pred CEEEECceEeCCCceEEEEEEccCCCccEEEEEEEEccCCCcceEEeeceeEEeCCCccceEEEEcCCCcCCCcEEEEEE
Confidence 689999999999999999999998876 999999976522111 123345566788889999999995 44567999999
Q ss_pred ecCceeeEeeEEEEEEecccEEEEEcCCCcccCCceeEEEEEEEcCCCccCCC-cceEEEEECCCCCeEEeeeeeccCCc
Q psy5522 79 GSGSLNFYNSTGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPSVT-GALEIFITDGKGNRIKQWTRALTTRG 157 (1397)
Q Consensus 79 g~~~~~f~~~~~v~~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~-~~~~v~I~DP~g~~I~qw~~~~~~~G 157 (1397)
|.+++.|.++++|+++++...+|||||||||||||||+||++++|.+++|... .+++|+|.||+|++|.+|...++.+|
T Consensus 81 ~~~~~~f~~~~~v~~~~~~~~~fi~TDr~iYrPGqtV~~r~~~~~~~~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G 160 (1325)
T 2pn5_A 81 GQRGFSFHKEAELVYLSKSISGLIQVDKPVFKPGDTVNFRVIVLDTELKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAG 160 (1325)
T ss_dssp EESSCCCEEEEEEEECSCSEEEEEEESCSEECTTCEEEEEEEEEETTSSCCSSCCEEEEEEECTTCCEEEEEEEEECBTT
T ss_pred ecCCccEEEEEEEEEEcccccEEEecCCCccCCCCEEEEEEEEecCCccccccCccEEEEEECCCCCEEEEEecccCCCC
Confidence 96678999999999999999999999999999999999999999999999754 57899999999999999999888999
Q ss_pred eeeeeeecCCCCCCeeEEEEEEEcC-eEEEEEEEEeeecCCcEEEEEeCCCceEeeCCeEEEEEEEEEecCccccceEEE
Q psy5522 158 VFSADLQLSKSPVLGDWNITINVLD-QKFTKRFTVAEYVLPKFEVNVNVPPHATFKDSKVVISVNAKYTYGKPVKGEATI 236 (1397)
Q Consensus 158 i~~~sf~L~~~~~lG~y~I~v~~~~-~~~~~~F~VeEYvLPkFeV~v~~p~~i~~~~~~~~v~v~AkYtyGkPV~G~v~v 236 (1397)
+++++|+||+++.+|.|+|++..++ ...+++|+|||||||+|||++++|+.++..++.+.++|||+|+||+||+|++++
T Consensus 161 ~~~~~f~Lp~~~~~G~y~I~~~~~~~~~~~~~F~VeeYvlP~feV~i~~~~~~~~~~~~~~v~v~a~Y~~G~Pv~G~~~v 240 (1325)
T 2pn5_A 161 VFESDLQIAPTPMLGVWNISVEVEGEELVSKTFEVKEYVLSTFDVQVMPSVIPLEEHQAVNLTIEANYHFGKPVQGVAKV 240 (1325)
T ss_dssp EEEEEEECCSSCCCEEEEEEEEETTEEEEEEEEEECCSCCCCEEEEEEESSCCBGGGCEEEEEEEEEESSSCBCEEEEEE
T ss_pred eEecceECCCCccccceEEEEEeCCCcEEEEEEEEEeccCceEEEEEecCceEEecCCeEEEEEEEEEcCCCeeeeEEEE
Confidence 9999999999999999999999976 457999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccccCccccccccceeEEeecCceEEEEEechhhhccccccceEEEEEEEEEECCcceEEeeEEEEEEEEeeeEEE
Q psy5522 237 TAYPTIFSGVIQPLFQTPVRKVVPIDGKTVIEFDVVKELQLTDEYERNIHFDVAVEEALTGRRQNNTGSVVFHKHKYKMD 316 (1397)
Q Consensus 237 ~v~~~~~~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~~~~~~~~l~V~a~VtE~gTG~~~~~~~~i~i~~~~~~i~ 316 (1397)
++++... + ..+..++|.+||++++|++++ +..... ...+.|+|+|+|++||++++++..+++.+.++.|+
T Consensus 241 ~v~~~~~--~------~~~~~~~d~~G~~~~~~~~~~-~~~~~~-~~~~~v~a~V~e~~tg~~~~~~~~i~i~~~~~~i~ 310 (1325)
T 2pn5_A 241 ELYLDDD--K------LKLKKELTVYGKGQVELRFDN-FAMDAD-QQDVPVKVSFVEQYTNRTVVKQSQITVYRYAYRVE 310 (1325)
T ss_dssp EEEETTT--T------EEEEEEEEEESEEEEEEECSS-CCCSSS-EEEEEEEEEEEETTTCCEEEEEEEEEEESSSCEEE
T ss_pred EEEECCC--C------cceeEEEecCcEEEEEEehhH-hccccc-cceEEEEEEEEECCCcEEEEeeEEEEEEEeeEEEE
Confidence 9887531 1 134677899999999999865 543222 35899999999999999999999999999999999
Q ss_pred EEecCCcccCCCeEEEEEEEEccCCCccCCCCceEEEEEeeeccccccceeeEeeCCCeeEEEEEeCCCCCceeEEEEEE
Q psy5522 317 LIKSSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGMIKLVYYPPANENVTTLGIEA 396 (1397)
Q Consensus 317 f~~~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~a 396 (1397)
|.+.+.+|+||+|+.++|+++|+||+|+++. .+.+.+... .+..+++++++|.+.|+++++.. +.| +.|++
T Consensus 311 ~~~~~~~~~~g~~~~~~v~~~~~dG~p~~~~--~~~v~~~~~-----~~~~~~~t~~~G~~~~~~~~~~~-g~y-~~l~v 381 (1325)
T 2pn5_A 311 LIKESPQFRPGLPFKCALQFTHHDGTPAKGI--SGKVEVSDV-----RFETTTTSDNDGLIKLELQPSEG-TEQ-LSIHF 381 (1325)
T ss_dssp EEESSSSBCTTSCEEEEEEEECTTSCBCTTC--EEEEEEGGG-----TEEEEEECCTTSEEEEEECCCTT-CCE-EEEEE
T ss_pred EEeCCCcccCCCCEEEEEEEECCCCCcCCCC--ceeEEEEEe-----cceEEEEeCCCCcEEEEEECCCC-CeE-EEEEE
Confidence 9999999999999999999999999999964 344443211 23456889999999999998754 444 35777
Q ss_pred EecCcceEEEEEEeecCCCCCeEEEEecCCCCCCCCeEEEEEEecCCcceEEEEEEeCCeEEEEEEEEecCCceeEEEEE
Q psy5522 397 EYLDIKEWFSTISASESPSNSFIQAALLTQNPKVNKDVELEINSTAPLKYISYQVLGRGDVIMADTITVPGNKMSTVIRF 476 (1397)
Q Consensus 397 ~~~~~~~~~~~v~~~~S~s~s~L~i~~~~~~~~~G~~~~v~v~s~~~~~~~~ylV~srG~Iv~~~~~~~~~~~~~~~~~l 476 (1397)
++.++.........|++++++||+|..++ .|+||++++|.|.++.+...++|++++||+|+.++.+.+. .++..+|+|
T Consensus 382 ~~~~~~~~~~~~~~~~~~s~~~l~l~~~~-~~~~G~~~~v~v~~~~~~~~~~y~v~~rg~i~~~~~~~~~-~~~~~~~~i 459 (1325)
T 2pn5_A 382 NAVDGFFFYEDVNKVETVTDAYIKLELKS-PIKRNKLMRFMVTCTERMTFFVYYVMSKGNIIDAGFMRPN-KQPKYLLQL 459 (1325)
T ss_dssp ECTTSCEEEEEEEBCCTTTTCCEEEEECS-CCCTTSEEEEEEEEEEEESCEEEEEESSSSEEEEEEECCS-SEEEEEEEE
T ss_pred EEccCcceeeeeeeccCCCCceEEEecCC-CCCCCCEEEEEEecCCCccEEEEEEEeCCEEEEEEEEEcC-CCcEEEEEE
Confidence 77765432223456889999999998765 8999999999999988777899999999999999988742 347789999
Q ss_pred eeCCCCCceeEEEEEEEecCCeEEEEeEEEEEcccccceeeEEecCCCCCCCceEEEEEEecCCcEEEEEEEeeeccccc
Q psy5522 477 LATYAMAPTAHVIVQYVREDGEVVADGLDLELEGGLQNFVSANVSPDETEPGSNIQINLEAKPNSYIGLLAVDQKVLLLK 556 (1397)
Q Consensus 477 ~vt~~maP~a~l~vy~v~~~gevvads~~~~V~~~f~nkV~l~~s~~~~~Pg~~v~l~V~a~p~S~v~L~aVD~sVllL~ 556 (1397)
+++++|+|++++++|+++ +|++++|+++|+|+. +.|+|+|+|++++++||++++|+|++.|+|+|+|+|||+||++|+
T Consensus 460 ~v~~~~~P~~~v~v~~v~-~ge~~~d~~~~~V~~-~~~~l~v~~~~~~~~Pg~~~~l~v~~~~~a~v~l~aVD~~vl~l~ 537 (1325)
T 2pn5_A 460 NATEKMIPRAKILIATVA-GRTVVYDFADLAFQE-LRNNFDLSIDEQEIKPGRQIELSMSGRPGAYVGLAAYDKALLLFN 537 (1325)
T ss_dssp ECCGGGCSEEEEEEEEEE-TTEEEEEEEEEECGG-GSCCCEEEECSSCCCTTSEEEEEEESCTTCEEEEEEEEHHHHHHT
T ss_pred eCChhcCccEEEEEEEEE-CCEEEEEEEEEEEEe-cCceEEEecCccccCCCCeEEEEEEeCCCCEEEEEEEehhhhhcC
Confidence 999999999999999999 799999999999997 489999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHhHhccccCCCCCCCCccccccccccCCCcchhhHhhhcCeEEEecccccccCcccccccCCCCCCCcccc
Q psy5522 557 TGNDIGKEDVMRELRSYDETDTSKLPLVENLRERYPGSFTAQATFEKAGAIVMTNGYVHERNPWVYYKSLNDPPDDMLDG 636 (1397)
Q Consensus 557 ~~~~lt~~~v~~~l~~y~~~~~~~~~~~~~~~~~~p~~~d~~~~f~~~Gl~v~Tn~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (1397)
++++++++++|+.+..|+. .+.|.+++|.++|+.+.++.....+..+. +..++ ++..
T Consensus 538 ~~~~l~~~~v~~~~~~~~~-----------------~~~~~~d~f~~~Gl~~~~~~~~~~~~~~~--~~~r~--g~~~-- 594 (1325)
T 2pn5_A 538 KNHDLFWEDIGQVFDGFHA-----------------INENEFDIFHSLGLFARTLDDILFDSANE--KTGRN--ALQS-- 594 (1325)
T ss_dssp CSSCCHHHHHHHHHSCCC--------------------CCSCCHHHHHTEEEEECTTCEECC------------------
T ss_pred CCccCCHHHHHHHHhcccc-----------------CCCchhhhhhhcCeEEEeccccCCCcccc--ccccc--cccc--
Confidence 9999999999998876643 23456688999999988876654433221 00000 0000
Q ss_pred hhhccccccccccccceecccCcceeEEEEEeccCceEEEEEEcCCccccEEEEEEEEeCCCceeeeeCCeeEEEeeeEE
Q psy5522 637 EEQLLSQVTTSVTQLTVRKHFPETWLFQMEETGFDGKVMVNEKVPDSITSWVLSAFSVDSLYGLGLMDMPKKLRVFRPFF 716 (1397)
Q Consensus 637 ~~~~~~~~~~~~~~~~vR~~FpETwiW~~~~~~~~G~a~v~~tvPDtiT~W~~~Afa~s~~~G~G~a~~~~~l~vfkpff 716 (1397)
.......+.+|++|||||+|.++.+|++|+++++++|||+||+|+++|||++++.|||+++.|.+++|+||||
T Consensus 595 -------~~~~~~~~~~R~~F~et~~w~~~~~~~~G~~~~~~~lPD~iT~w~v~a~a~s~~~g~G~~~~~~~~~v~kp~~ 667 (1325)
T 2pn5_A 595 -------GKPIGKLVSYRTNFQESWLWKNVSIGRSGSRKLIEVVPDTTTSWYLTGFSIDPVYGLGIIKKPIQFTTVQPFY 667 (1325)
T ss_dssp ---------------------CCCBCCCEEECTTTTEEEEEEECCSSCEEEEEEEEEEETTTEEEECSSCEEEEECCSEE
T ss_pred -------cccccccCccccCCCCceEEEEEEcCCCCeEEEEeeCCCCccEEEEEEEEECCCCceeeccCceEEEEeeeEE
Confidence 0011234679999999999999889999999999999999999999999999989999985588999999999
Q ss_pred EEecCCceeeeCCEEEEEEEEEcCCCccEEEEEEEeecC-CeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeEEEEE
Q psy5522 717 ISLDLPYSVMRGEVVAIPVVVFNYLSQDLVADVTLENVG-QFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGSTTTFV 795 (1397)
Q Consensus 717 v~l~LPysv~rGE~~~l~~~VfNyl~~~~~v~v~L~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~ 795 (1397)
|+++|||||+|||++.|+++||||++++++|+|+|+.++ .++++..... .....++++|+++++++++|+
T Consensus 668 v~~~lP~~v~~Gd~~~l~~~v~N~~~~~~~v~v~l~~~~~~~~~~~~~~~---------~~~~~~~v~v~~~~~~~v~f~ 738 (1325)
T 2pn5_A 668 IVENLPYSIKRGEAVVLQFTLFNNLGAEYIADVTLYNVANQTEFVGRPNT---------DLSYTKSVSVPPKVGVPISFL 738 (1325)
T ss_dssp EEEECCSEEETTCEEEEEEEEEECSSSCEEEEEEEECGGGCEEETTSCTT---------CCEEEEEEEECTTCCEEEEEE
T ss_pred EEcCCCcEEEcCCEEEEEEEEEeCCCCcEEEEEEEeecCCceEEeccCCC---------CCcceEEEEECCCCeEEEEEE
Confidence 999999999999999999999999999999999998775 5665432111 112467899999999999999
Q ss_pred EEeceeeeEEEEEEEEeCC--CCceeEEEEEecCCCeeeEEEEEEEEecCCCceeEEEEEecCCCCcCCCCcEEEEEEEc
Q psy5522 796 ITPKELGYIGIKVTATSNL--AGDSMEGKLLVKPEGETQYKNKAIFVDLRKNKTFSVNVTLDMPKNIVPGSEHVEVSAVG 873 (1397)
Q Consensus 796 v~p~~lG~v~itV~A~~~~--~~D~v~k~L~V~peG~~~~~t~s~~l~~~~~~~~~~~i~l~~P~~~v~gs~~~~vsv~g 873 (1397)
|+|.++|.++|+|+|.+.. .+|++++.|+|+|+|++++.+++.+||++++...+.++++.+|.++++||.+++|++.|
T Consensus 739 i~~~~~G~~~i~v~a~~~~~~~~D~v~~~l~V~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~s~~~~vs~~~ 818 (1325)
T 2pn5_A 739 IKARKLGEMAVRVKASIMLGHETDALEKVIRVMPESLVQPRMDTRFFCFDDHKNQTFPINLDINKKADSGSTKIEFRLNP 818 (1325)
T ss_dssp EEECSSEEEEEEEEEESSTTSSEEEEEEEEEEECSSCCCCEEEEEEEEEEEEEEEEEEEECCCCCSSCCSCCEEEEEEES
T ss_pred EEEcccceEEEEEEEEecCCCCCcEEEEEEEEecCceEEEEEEEEEEeccCCCceEEEEeccCCCCCCCCCeeEEEEEEe
Confidence 9999999999999999875 68999999999999999999999999985433456778999999999999999999999
Q ss_pred ccccCcccCcchhhccCCCchhhhhcccchHHHHHHHHHHhccccHHHHHHHHHHHHhccccceeeecCCCCccccCCCC
Q psy5522 874 DLLGPSIPNLANLIKMPFGCGEQNMLNFVPNIVVLEYLKKTYQLTDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTD 953 (1397)
Q Consensus 874 d~l~~~~~~l~~Ll~~P~GCgEQ~m~~~~p~i~~l~yL~~~~~l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~ 953 (1397)
++++.++++|++|++|||||+||||++++|++|+++||+.++|++++++++++++|+.||+|++.||++||||++|++.
T Consensus 819 ~~~~~~~~~L~~L~~~PyGC~EQ~~s~~~p~~~~~~yl~~~~~~~~~~~~~~~~~i~~g~~rll~~q~~dGgf~~f~~~- 897 (1325)
T 2pn5_A 819 NLLTTVIKNLDHLLGVPTGCGEQNMVKFVPNILVLDYLHAIGSKEQHLIDKATNLLRQGYQNQMRYRQTDGSFGLWETT- 897 (1325)
T ss_dssp STTHHHHHTTTCCCSSCCCSTTGGGGGTHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHGGGBCTTSCBCSSSSS-
T ss_pred chHHHHHHhHHHHhcCCCCchhHHHHHHhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeeccCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CCCCcchhHHHHHHHHHccCCCc-cCHHHHHHHHHHHHhcccCCCccccchHhHHHhhcCCCCccEEEEEEEEeccccce
Q psy5522 954 PNGSTWLTAFVAKSFRQAASHTT-IDESVILEALAWLSSNQAVNGSFPEVGKVSHADMQGGAAKGLALTAYTLLPKKTRA 1032 (1397)
Q Consensus 954 ~~~s~wlTAyvl~~~~~a~~~i~-vd~~~~~~~~~WL~~~q~~~G~F~stqdvl~al~~~~~~~~v~lt~~v~lp~~~~~ 1032 (1397)
.+++|+||||+++|.+|+++++ ||+..++++++||.++|+++|+|.....+++..++++.+..+.+++++++
T Consensus 898 -~~s~~lTa~v~~~l~~a~~~~~~v~~~~l~~a~~~L~~~q~~dG~f~~~~~~~~~~~~g~~~~~~~~tayvl~------ 970 (1325)
T 2pn5_A 898 -NGSVFLTAFVGTSMQTAVKYISDIDAAMVEKALDWLASKQHFSGRFDKAGAEYHKEMQGGLRNGVALTSYVLM------ 970 (1325)
T ss_dssp -CCCHHHHHHHHHHHHHHTTTCSCSCHHHHHHHHHHHHHTCCTTSCCCCCSCCSCHHHHCCSSTTHHHHHHHHH------
T ss_pred -CCCeeehHHHHHHHHHHHhhEEcCCHHHHHHHHHHHHhhhccCCCccccccccChhhcCcccCCccccHHHHH------
Confidence 6899999999999999999966 99999999999999999999999877667666666665545556666544
Q ss_pred eEEEEeeeeEEEEEEEEEEeeccCCCCCceeeccccccCCCCCceEEEEEEeecCCCCccEEEEEecCCcccccCCCCch
Q psy5522 1033 VNMTATGSGFAVVYISYQYNINVTGAWPMFTLDPQVDKNSDSNHLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALP 1112 (1397)
Q Consensus 1033 ~~v~~~G~G~~~~q~~~~Yn~~~~~~~~~f~l~v~~~~~~~~~~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~ 1112 (1397)
||+|.
T Consensus 971 -------------------------------------------------------------aL~~~-------------- 975 (1325)
T 2pn5_A 971 -------------------------------------------------------------ALLEN-------------- 975 (1325)
T ss_dssp -------------------------------------------------------------HHHTC--------------
T ss_pred -------------------------------------------------------------HHhhC--------------
Confidence 55554
Q ss_pred hhcccCceeEEEEeCCeEEEEEEeeecC-CccceeeecccccccchhhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCC
Q psy5522 1113 SLQVSQNVKRVETKNGNTMVVLYFAYHQ-VLPWTLMHYLVSKYPRMNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQ 1191 (1397)
Q Consensus 1113 ~l~~~~~i~~~e~~~~~~~v~lY~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~ 1191 (1397)
+.. + . ....+++|+.||+++.+...++|++|++||||+|+|
T Consensus 976 ---------------g~~---------~~~--------------~~~~i~~a~~~L~~~~~~~~~~~~~a~~ayaL~l~g 1017 (1325)
T 2pn5_A 976 ---------------DIA---------KAK--------------HAEVIQKGMTYLSNQFGSINNAYDLSIATYAMMLNG 1017 (1325)
T ss_dssp ---------------HHH---------HHH--------------THHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHHT
T ss_pred ---------------ccc---------ccc--------------cHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHhcC
Confidence 221 0 1 345799999999998887789999999999999999
Q ss_pred CCchHHHHHHHhhcccccC--CcccccccCCCCCCCCCCCCCCCcccchhhHHHHHHhhccCCcccchhhhhhhhhcccC
Q psy5522 1192 HPVKDVAFNLLESKAHNED--GKKWWKRAERPEDKKNPWAQVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQND 1269 (1397)
Q Consensus 1192 ~~~~~~~~~~L~~~a~~~~--~~~~W~~~~~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~ 1269 (1397)
+..+.+++++|++.|..++ +..||.. +.+||+||||||+++..++...+.++++||.+|||.
T Consensus 1018 ~~~~~~~l~~L~~~~~~~~~~~~~~w~~----------------~s~ve~tA~aLlall~~~~~~~~~~~v~wL~~q~~~ 1081 (1325)
T 2pn5_A 1018 HTMKEEALNKLIDMSFIDADKNERFWNT----------------TNPIETTAYALLSFVMAEKYTDGIPVMNWLVNQRYV 1081 (1325)
T ss_dssp CTTHHHHHHHHHHTCEEETTTTEEECCS----------------SSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCT
T ss_pred CchHHHHHHHHHhhhhhccCCCcccCCC----------------CCchHHHHHHHHHHhhhccchhhHHHHHHHHhccCC
Confidence 9977889999999987665 3678821 138999999999999999888999999999999999
Q ss_pred CCCccccccC----------------------------------------------------------------------
Q psy5522 1270 QGGFASTQMS---------------------------------------------------------------------- 1279 (1397)
Q Consensus 1270 ~Ggf~stQdT---------------------------------------------------------------------- 1279 (1397)
+|||.|||||
T Consensus 1082 ~g~w~sTq~T~~aL~AL~~y~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~G~~~~~~ 1161 (1325)
T 2pn5_A 1082 TGSFPSTQDTFVGLKALTKMAEKISPSRNDYTVQLKYKKSAKYFKINSEQIDVENFVDIPEDTKKLEINVGGIGFGLLEV 1161 (1325)
T ss_dssp TSSCSSHHHHHHHHHHHHHHHHHHSCSCCEEEEEEEETTEEEEEEECCSSCCSCCCEECCCSCSEEEEEEEEEEEEEEEE
T ss_pred CCCccchHHHHHHHHHHHHHHHHcCCCCCcEEEEEEeCCceEEEEEcccccceEEEEEcCCCCceEEEEEEEeEEEEEEE
Confidence 9999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy5522 1280 -------------------------------------------------------------------------------- 1279 (1397)
Q Consensus 1280 -------------------------------------------------------------------------------- 1279 (1397)
T Consensus 1162 ~~~y~~~~~~~~~~f~l~v~~~~~~~~~~~~l~v~~~~~~~~~~~~s~m~ivdv~lpsG~e~~~~~L~~~~~~~~i~~~E 1241 (1325)
T 2pn5_A 1162 VYQFNLNLVNFENRFQLDLEKQNTGSDYELRLKVCASYIPQLTDRRSNMALIEVTLPSGYVVDRNPISEQTKVNPIQKTE 1241 (1325)
T ss_dssp EEECCCCCCCEEESEEEEEEEECCSSTTEEEEEEEEEECCBTTBCSCSSEEEEEECCTTEEEEEEEEESCCSSSCCCEEE
T ss_pred EEEEcccCCCCCCCceEEEEEecCCCCceEEEEEEEEeccCCCCCCCceEEEEEecccCcccCHhHHHHhhccCccEEEE
Confidence
Q ss_pred ----------------CCccccceeccccccccccCceeEEEeeccccchhheeeeccccccccccccCCCCCCcc
Q psy5522 1280 ----------------KKELCPTVSAFRTHKVAQQKPVPVSIYDYYDQSRRARMFYEPRVATLCDICEGEDCSKDT 1339 (1397)
Q Consensus 1280 ----------------~~~~c~~~~~~~~~~v~~~~p~~v~~ydyy~~~~~~~~~y~~~~~~~c~~c~~~~c~~~~ 1339 (1397)
.++.|+.|.++|.++|+++|||+|+|||||+|+++|+.||+++..++||+|++++|+..|
T Consensus 1242 ~r~~~~~v~~y~d~~~~~~~~~~~~~~r~~~v~~~~Pa~v~vydyY~p~~~~~~~Y~~~~~~~c~~c~~~~~~~~~ 1317 (1325)
T 2pn5_A 1242 IRYGGTSVVLYYDNMGSERNCFTLTAYRRFKVALKRPAYVVVYDYYNTNLNAIKVYEVDKQNLCEICDEEDCPAEC 1317 (1325)
T ss_dssp EETTTTEEEEEESCCCSSCEEEEEEEEECSCEESCCCEEEEEEETTEEEEEEEEEECCCCCCHHHHSCTTTCCSSC
T ss_pred EECCCCEEEEEEecCCCCceEEEEEEEEEEEeccccceEEEEEeCCCCCceEEEEECcCCccccccCCCcCccccc
Confidence 456899999999999999999999999999999999999999889999999999999876
No 4
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=100.00 E-value=1.7e-164 Score=1711.63 Aligned_cols=1184 Identities=23% Similarity=0.359 Sum_probs=979.9
Q ss_pred CEEEEeeCeeecCCeEEEEEEeecCCccEEEEEEEEeecCCCCeeEEeEEEEEC--CCceeEEEEEcCCCC--Cc----e
Q psy5522 1 YYTVVAPKVLRPNGEYHVAVSTQAVSEATQVSVEVGGKQDSGGEFRTKQLLSVD--PFSTRIVKLDIGDLG--PG----Q 72 (1397)
Q Consensus 1 ~y~v~~P~~lr~g~~~~v~v~l~~~~~~v~v~v~L~~~~~~~~~~~~~~~~~~~--~~~~~~~~f~vP~~~--~~----~ 72 (1397)
+|+|++|++||+|++|+|||++++.+++++|+|+|++.++. ......+.+.++ .+++.|++|+||... .+ .
T Consensus 22 ~y~v~~P~~lr~g~~~~v~v~~~~~~~~~~v~v~l~~~~~~-~~~~~~~~v~l~~~~~~~~~~~~~vp~~~~~~~~~~~~ 100 (1676)
T 3cu7_A 22 TYVISAPKIFRVGASENIVIQVYGYTEAFDATISIKSYPDK-KFSYSSGHVHLSSENKFQNSAILTIQPKQLPGGQNPVS 100 (1676)
T ss_dssp CEEEEEESSEETTCCEECCEEECCCSCCBCEEEEEEETTEE-EEESCCCBCCBCTTTTTEECCEECCCCCCCCSSCCCCC
T ss_pred cEEEEECCEEecCCceEEEEEeEcCCCCEEEEEEEEecCCC-ceEEeeeEEEEccCCCcccceeEecCCccccCcccccc
Confidence 59999999999999999999999999999999999853111 112223334443 345689999999643 21 2
Q ss_pred e-EEEEEecCceeeEeeEEEEEEecccEEEEEcCCCcccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeee
Q psy5522 73 Y-NLTVKGSGSLNFYNSTGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTR 151 (1397)
Q Consensus 73 ~-~l~v~g~~~~~f~~~~~v~~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~ 151 (1397)
| +|+++|. .|.++++|++++++..+|||||||||||||||+||++++|.+++|. ..+++|+|.||+|++|.||.
T Consensus 101 yv~l~~~~~---~f~~~~~v~~~~~~~~~fiqTDR~iYrPGqtV~~r~i~~d~~~~p~-~~~v~v~l~dP~G~~i~~~~- 175 (1676)
T 3cu7_A 101 YVYLEVVSK---HFSKSKRMPITYDNGFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPA-KRETVLTFIDPEGSEVDMVE- 175 (1676)
T ss_dssp CEEEEEEES---SCEEEEEECEECCCSEEEEEESCSEECTTCEECEEEEEECTTCSCC-CCCEEEEEEETTTEECCCEE-
T ss_pred EEEEEEEec---CeeEEEEEEEEcCCCcEEEECCCCccCCCCEEEEEEEEECCCCccc-ccceEEEEECCCCCEEEEEe-
Confidence 4 8999982 6789999999999999999999999999999999999999999996 57899999999999999996
Q ss_pred eccCCceee-eeeecCCCCCCeeEEEEEEEcC---eEEEEEEEEeeecCCcEEEEEeC-CCceEeeC-CeEEEEEEEEEe
Q psy5522 152 ALTTRGVFS-ADLQLSKSPVLGDWNITINVLD---QKFTKRFTVAEYVLPKFEVNVNV-PPHATFKD-SKVVISVNAKYT 225 (1397)
Q Consensus 152 ~~~~~Gi~~-~sf~L~~~~~lG~y~I~v~~~~---~~~~~~F~VeEYvLPkFeV~v~~-p~~i~~~~-~~~~v~v~AkYt 225 (1397)
..+.+|+++ ++|+||+++++|.|+|++..++ ...+++|+|||||||+|||++++ ++++...+ +.+.++|||+|+
T Consensus 176 ~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~s~~F~VeEYvlP~feV~i~~~~~~~~~~d~~~~~v~v~A~Y~ 255 (1676)
T 3cu7_A 176 EIDHIGIISFPDFKIPSNPRYGMWTIKAKYKEDFSTTGTAYFEVKEYVLPHFSVSIEPEYNFIGYKNFKNFEITIKARYF 255 (1676)
T ss_dssp ECCSSSEEECCCEECCSSCCCEEEEEEEEBSSSCCCEEEEEEEECEECCCSSEECCEESCSEECSTTSSCCEEEECEEET
T ss_pred eecCCCceecceeeCCCCccccceEEEEEecCCCCceEEEEEEEccccCceEEEEEEccCcEEEecCCCEEEEEEEEEEc
Confidence 445899999 9999999999999999999865 57899999999999999999999 66666666 899999999999
Q ss_pred cCccc-cceEEEEEEeccc-cCccccccccceeEEeecCceEEEEEechhhhcc------ccc-cceEEEEEEEEEECCc
Q psy5522 226 YGKPV-KGEATITAYPTIF-SGVIQPLFQTPVRKVVPIDGKTVIEFDVVKELQL------TDE-YERNIHFDVAVEEALT 296 (1397)
Q Consensus 226 yGkPV-~G~v~v~v~~~~~-~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~------~~~-~~~~l~V~a~VtE~gT 296 (1397)
||+|| +|++++++++..+ ++.....++.........+||+++.|+++. +.. ... ..+++.|+|+|+|.++
T Consensus 256 yG~PV~~G~a~v~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~v~a~V~E~~g 334 (1676)
T 3cu7_A 256 YNKVVTEADVYITFGIREDLKDDQKEMMQTAMQNTMLINGIAQVTFDSET-AVKELSYYSLEDLNNKYLYIAVTVIESTG 334 (1676)
T ss_dssp TTEECSEEEEEEEEEEESCSSCSCCEEESSCCBCCCEETTBEEEECCTTT-TTTTTSSCCCSTTCCSEEEEEEEEEESSS
T ss_pred CCceeecCeEEEEEEEeeccCCCcceecccceEEEEeccceEEEEEeHHH-hhhhccccchhhccCceEEEEEEEEECCC
Confidence 99999 9999999988642 221112233333322224999999999865 432 111 1468999999999967
Q ss_pred ceEEee-EEEEEEEEeeeEEEEEecCCcccCCCeEEEEEEEEccCCCccCCCCceEEEEEee-ec--ccc-ccceeeEee
Q psy5522 297 GRRQNN-TGSVVFHKHKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGF-SY--DES-KYEANQYKL 371 (1397)
Q Consensus 297 G~~~~~-~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~-~~--~~~-~~~~~~~tt 371 (1397)
|+.+++ +..++|..++|+|+|.+.+.+|+||+||.++|.++|+||+|+++. .|.+.... .| ... -....++++
T Consensus 335 g~~~~~~~~~i~i~~~~~~i~~~~~~~~~k~g~p~~~~v~~~~~dG~p~~~~--~v~l~~~~~~~~~~~~~~~~~~~~~t 412 (1676)
T 3cu7_A 335 GFSEEAEIPGIKYVLSPYKLNLVATPLFLKPGIPYPIKVQVKDSLDQLVGGV--PVTLNAQTIDVNQETSDLDPSKSVTR 412 (1676)
T ss_dssp CCCEEEEECCCEECSCSEEECCBSCCSEECSSSCEEEEEEEEETTCCBCCSC--EEEEEEEEEETTSCEEECCCEEEECC
T ss_pred CeEEEeeEEEEEEEeeeEEEEEecCCCcccCCCcEEEEEEEEcCCCCccCcc--eEEEeccccccccccccccccceeEE
Confidence 888887 688999999999999989999999999999999999999999964 45554321 12 110 112457889
Q ss_pred CCCeeEEEEEeCCCCCceeEEEEEEEecCcc-------eEEEEEEeecCC--CCCeEEEEecCCCCCCCCeEEEEEEecC
Q psy5522 372 DRNGMIKLVYYPPANENVTTLGIEAEYLDIK-------EWFSTISASESP--SNSFIQAALLTQNPKVNKDVELEINSTA 442 (1397)
Q Consensus 372 d~~G~~~f~i~~~~~~~~~~l~l~a~~~~~~-------~~~~~v~~~~S~--s~s~L~i~~~~~~~~~G~~~~v~v~s~~ 442 (1397)
+++|.+.|+|+++.+. ..++|++++++.. ...+.+..|++. ++++|+|..+++.|+||++++|.|+++.
T Consensus 413 ~~~G~~~~~~~~~~~~--~~~~l~v~~~d~~~~~~~~a~~~~~~~~~~~~~~s~~~l~l~~~k~~~~~Ge~~~v~v~~~~ 490 (1676)
T 3cu7_A 413 VDDGVASFVLNLPSGV--TVLEFNVKTDAPDLPEENQAREGYRAIAYSSLSQSYLYIDWTDNHKALLVGEHLNIIVTPKS 490 (1676)
T ss_dssp SSSCEEEEEECCCTTE--EEEEEEEEECCTTSBGGGSCEEEEEEEECCCTTSCCCEEEECCSSSSBCTTCEEEEEEECCC
T ss_pred CCCCeEEEEEECCCCC--eEEEEEEEEcccccccccccceEEEEEeecCCCCCCceEEEEecCCCcCCCCeEEEEEEECC
Confidence 9999999999988653 3366677665432 234555555544 6899999999999999999999999854
Q ss_pred ----CcceEEEEEEeCCeEEEEEEEEecCCceeEEEEEeeCCCCCceeEEEEEEEe---cCCeEEEEeEEEEEcccccce
Q psy5522 443 ----PLKYISYQVLGRGDVIMADTITVPGNKMSTVIRFLATYAMAPTAHVIVQYVR---EDGEVVADGLDLELEGGLQNF 515 (1397)
Q Consensus 443 ----~~~~~~ylV~srG~Iv~~~~~~~~~~~~~~~~~l~vt~~maP~a~l~vy~v~---~~gevvads~~~~V~~~f~nk 515 (1397)
+..+++|+|++||+|+.++++++..+++..+++|+++++|+|++++++|+++ ++||+++|+++|+|++||.|+
T Consensus 491 ~~~~~~~~~~y~v~s~g~il~~~~~~~~~~~~~~~i~i~vt~~~~P~~~v~vy~v~p~~~~ge~v~ds~~i~v~~~~~~~ 570 (1676)
T 3cu7_A 491 PYIDKITHYNYLILSKGKIIHFGTREKFSDASYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLNIEEKCGNQ 570 (1676)
T ss_dssp CSCCCCCEEEEEEEETTEEEEEEEEECCSSSSCEEEEEECCGGGSSEEEEEEEEEECCSSSCEEEEEEEEEEBCCCCSSC
T ss_pred cccCcccEEEEEEEeCCcEEEcceEEecCCCcEEEEEeecChhhCCcEEEEEEEEEeeCCCCEEEEEEEEEEEeeccCce
Confidence 3457999999999999999999864456789999999999999999999999 689999999999999988999
Q ss_pred eeEEec--CCCCCCCceEEEEEEecCCcEEEEEEEeeecccccCCCCCChhHHhHhccccCCCCCCCCccccccccccCC
Q psy5522 516 VSANVS--PDETEPGSNIQINLEAKPNSYIGLLAVDQKVLLLKTGNDIGKEDVMRELRSYDETDTSKLPLVENLRERYPG 593 (1397)
Q Consensus 516 V~l~~s--~~~~~Pg~~v~l~V~a~p~S~v~L~aVD~sVllL~~~~~lt~~~v~~~l~~y~~~~~~~~~~~~~~~~~~p~ 593 (1397)
|+|+|+ +++++||++++|+|++.|+|+|+|+|||+|||+|+++++||++++|+.|..|+.+|+ +. +
T Consensus 571 L~v~~~~~~~~~~Pg~~~~l~V~~~~~a~v~l~aVD~svl~L~~~~~lt~~~v~~~l~~~~~~~~--------~~----~ 638 (1676)
T 3cu7_A 571 LQVHLSPDADAYSPGQTVSLNMATGMDSWVALAAVDSAVYGVQRGAKKPLERVFQFLEKSDLGCG--------AG----G 638 (1676)
T ss_dssp CCCEESSCCSSBCTTCEEEEEEECSSCEEEEECBEETTTTCSSCCTTCSHHHHHHHTTTTCCCCS--------SS----C
T ss_pred EEEEecCCccccCCCCeEEEEEEECCCCEEEEEEEchhhhhcCCcccCCHHHHhhhhcccCCCCC--------CC----C
Confidence 999997 688999999999999999999999999999999999999999999999999887753 11 4
Q ss_pred CcchhhHhhhcCeEEEecccccccC----ccccc--c-----------cCCCCC--------CCc--c------------
Q psy5522 594 SFTAQATFEKAGAIVMTNGYVHERN----PWVYY--K-----------SLNDPP--------DDM--L------------ 634 (1397)
Q Consensus 594 ~~d~~~~f~~~Gl~v~Tn~~~~~~~----~~~~~--~-----------~~~~~~--------~~~--~------------ 634 (1397)
+.|.+++|+++||.++||..+..+. .|... + ...|.. +|+ +
T Consensus 639 g~d~~~vf~~~gl~v~t~~~~~~~~~~~~~c~~~~~r~r~~~~~~~~~~~~y~~~~~~~~~~dg~~~~~~~s~~~r~~~~ 718 (1676)
T 3cu7_A 639 GLNNANVFHLAGLTFLTNANADDSQENDEPCKEILRPRRTLQKKIEEIAAKYKHSVVKKCCYDGACVNNDETCEQRAARI 718 (1676)
T ss_dssp CSSSHHHHHHTTEEEECSSSCCCCSSSCCCCCSCC-----CCHHHHTGGGCCSSHHHHHHHHGGGSCCCSSCHHHHHHTC
T ss_pred CcchhhhhhhCCEEEEeccccCCcccccCCCCcccccccchhhhhhhhhhcccchhhhhhhhcccccccccchhhhhhcc
Confidence 6788999999999999998765331 12100 0 000000 011 0
Q ss_pred ----cc------------hhh--------ccccc--c--ccccccceecccCcceeEEEEEeccCceEEEEEEcCCcccc
Q psy5522 635 ----DG------------EEQ--------LLSQV--T--TSVTQLTVRKHFPETWLFQMEETGFDGKVMVNEKVPDSITS 686 (1397)
Q Consensus 635 ----~~------------~~~--------~~~~~--~--~~~~~~~vR~~FpETwiW~~~~~~~~G~a~v~~tvPDtiT~ 686 (1397)
++ .+. ..... . .....+.+|++|||||+|.++.++ +|++ ++++|||+||+
T Consensus 719 ~~g~~~~~~f~~cc~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~R~~F~etw~w~~~~~~-~G~~-~~~~lPDsiTt 796 (1676)
T 3cu7_A 719 SLGPRCIKAFTECCVVASQLRANISHKDMQLGRLHMKTLLPVSKPEIRSYFPESWLWEVHLVP-RRKQ-LQFALPDSLTT 796 (1676)
T ss_dssp CSCTTTHHHHHHHHHHHHHHHTTCC-----CCCCCCCCCCCTTCCEESCCCCCCBCCCEEEES-SEEE-EEEECCSSSEE
T ss_pred ccchHHHHHHHHhhhhhhhhhhhhccccccccccccccccccccccccccCCcceEEeeeecC-CCcE-EEEECCCCccE
Confidence 00 000 00000 0 012356799999999999988776 8986 99999999999
Q ss_pred EEEEEEEEeCCCceeeeeCCeeEEEeeeEEEEecCCceeeeCCEEEEEEEEEcCCCccEEEEEEEeecCCeeeeecCCCc
Q psy5522 687 WVLSAFSVDSLYGLGLMDMPKKLRVFRPFFISLDLPYSVMRGEVVAIPVVVFNYLSQDLVADVTLENVGQFDFADFSNEV 766 (1397)
Q Consensus 687 W~~~Afa~s~~~G~G~a~~~~~l~vfkpffv~l~LPysv~rGE~~~l~~~VfNyl~~~~~v~v~L~~s~~~~~~~~~~~~ 766 (1397)
|+++|||++++ |||++ ++.+++|||||||+++|||||+|||++.|+++||||++++++|+|+|..++++++......
T Consensus 797 Wrv~ava~s~~-g~G~a-~~~~~~v~kpf~v~~~LP~~v~~GD~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~- 873 (1676)
T 3cu7_A 797 WEIQGIGISNT-GICVA-DTVKAKVFKDVFLEMNIPYSVVRGEQIQLKGTVYNYRTSGMQFCVKMSAVEGICTSESPVI- 873 (1676)
T ss_dssp EEECEEEEETT-EEEEC-CCEEEEECCSEEEEEECCSCEETTCCEEEEEEEEECSSSCBCCCCEECCCTTEECSSCC---
T ss_pred EEEEEEEECCC-ceEec-cceEEEEEeeEEEEccCCcEEEECcEEEEEEEEEcCCCCcEEEEEEEecCCCeEEeccccc-
Confidence 99999999998 99999 6889999999999999999999999999999999999999999999999999876432210
Q ss_pred cCCCCCCcceeeeEEEEEeCCCeeEEEEEEEeceeeeEEEEEEEEeCCCCceeEEEEEecCCCeeeEEEEEEEEecCCC-
Q psy5522 767 DAAPQPKFEVFRRKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNLAGDSMEGKLLVKPEGETQYKNKAIFVDLRKN- 845 (1397)
Q Consensus 767 ~~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~p~~lG~v~itV~A~~~~~~D~v~k~L~V~peG~~~~~t~s~~l~~~~~- 845 (1397)
... .......++++|+++++++++|+|+|.++|.++|+|+|.+...+|+++|+|+|+|+|++++.+++.+||+++.
T Consensus 874 ~~~---~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~v~A~~~~~~D~v~~~L~V~p~~~~~~~~~~~~l~~~~~~ 950 (1676)
T 3cu7_A 874 DHQ---GTKSSKCVRQKVEGSSSHLVTFTVLPLEIGLHNINFSLETWFGKEILVKTLRVVPEGVKRESYSGVTLDPRGIY 950 (1676)
T ss_dssp -----------CCCCCCBCTTEEEECCEEEEECSSSCCCEEEEEEETTEEEEEEECCCEECSCEEEEEEEEEEEBTTCTT
T ss_pred ccc---ccccceeEEEEECCCCeEEEEEEEEEcccCcEEEEEEEEecCCCceEEEEEEEecCceEEEEEEEEEEeccccc
Confidence 000 0001224689999999999999999999999999999999888999999999999999999999999998641
Q ss_pred -ceeE-EEEEecCCCCcCCCCcE-EEEEEEcccccCccc------CcchhhccCCCchhhhhcccchHHHHHHHHHHhcc
Q psy5522 846 -KTFS-VNVTLDMPKNIVPGSEH-VEVSAVGDLLGPSIP------NLANLIKMPFGCGEQNMLNFVPNIVVLEYLKKTYQ 916 (1397)
Q Consensus 846 -~~~~-~~i~l~~P~~~v~gs~~-~~vsv~gd~l~~~~~------~l~~Ll~~P~GCgEQ~m~~~~p~i~~l~yL~~~~~ 916 (1397)
+..+ .++++.+|.+++|||.+ ++|++.|++++++++ +|++|++|||||+||||++++||+|+++||+.++|
T Consensus 951 ~~~~~~~~~~~~~p~~~vp~s~~~~~v~~~~~~~~~~~~~~l~~~~L~~L~~~PyGC~EQ~~s~~~P~~~~~~yL~~~~q 1030 (1676)
T 3cu7_A 951 GTISRRKEFPYRIPLDLVPKTEIKRILSVKGLLVGEILSAVLSQEGINILTHLPKGSAEAELMSVVPVFYVFHYLETGNH 1030 (1676)
T ss_dssp TSCBCCEEECCCCCTTBCTTCCCEEEEEEESSTTHHHHHHHHSSSSCCCSSSCCSCSSHHHHTTSHHHHHHHHHHHHTTC
T ss_pred CcceeeEEEeccCccccCCCCceEEEEEEEcccchhhhhhccchhhhHHHhhCCCCcHHHHHHhhhhHHHHHHHHHhhcc
Confidence 1234 78899999999999997 999999999999999 99999999999999999999999999999999988
Q ss_pred ------ccHHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCCcchhHHHHHHHHHccCCCccCHHHHHHHHHHHH
Q psy5522 917 ------LTDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFRQAASHTTIDESVILEALAWLS 990 (1397)
Q Consensus 917 ------l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~ 990 (1397)
++++.+++|+++|+.||+|+|+||++||||+||++ ..+|+||||||+++|.+|++++.||+.+++++++||.
T Consensus 1031 w~~l~~~~~~~~~~~~~~i~~g~~r~l~~q~~dGsfs~w~~--~~~s~wLTAyv~~~l~~A~~~~~v~~~~l~~a~~~L~ 1108 (1676)
T 3cu7_A 1031 WNIFHSDPLIEKQKLKKKLKEGMLSIMSYRNADYSYSVWKG--GSASTWLTAFALRVLGQVNKYVEQNQNSICNSLLWLV 1108 (1676)
T ss_dssp GGGCSSCHHHHHHHHHHHHHHHHHHGGGGBCTTSCBCSSSS--SCCCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHHHHHHHHhhccCCCCCccccCC--CCCcEEEeHHHHHHHHHHHhcccCCHHHHHHHHHHHH
Confidence 56678999999999999999999999999999954 4789999999999999999999999999999999999
Q ss_pred h-cccCCCccccchHhHHHhhcCCCC-----ccEEEEEEEEeccccceeEEEEeeeeEEEEEEEEEEeeccCCCCCceee
Q psy5522 991 S-NQAVNGSFPEVGKVSHADMQGGAA-----KGLALTAYTLLPKKTRAVNMTATGSGFAVVYISYQYNINVTGAWPMFTL 1064 (1397)
Q Consensus 991 ~-~q~~~G~F~stqdvl~al~~~~~~-----~~v~lt~~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~~~~~~f~l 1064 (1397)
+ +|+++|+|.+...+++..++++.. .++.+++|+++
T Consensus 1109 ~~~q~~~g~f~~~~~~~~~~~~gg~~~~~~~~~~~ltAyvl~-------------------------------------- 1150 (1676)
T 3cu7_A 1109 ENYQLDNGSFKENSQYQPIKLQGTLPVEARENSLYLTAFTVI-------------------------------------- 1150 (1676)
T ss_dssp HHSBCTTSCBCCCSSCCCCCCCSCHHHHHHHHHHHHHHHHHH--------------------------------------
T ss_pred HhhCCCCCcccCCccccchhhcCCcccccccCccccHHHHHH--------------------------------------
Confidence 8 999999998877666665665543 24567777655
Q ss_pred ccccccCCCCCceEEEEEEeecCCCCccEEEEEecCCcccccCCCCchhhcccCceeEEEEeCCeEEEEEEeeecCCccc
Q psy5522 1065 DPQVDKNSDSNHLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKRVETKNGNTMVVLYFAYHQVLPW 1144 (1397)
Q Consensus 1065 ~v~~~~~~~~~~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~~~e~~~~~~~v~lY~~~~~~~~~ 1144 (1397)
||+|. +.. ..++.
T Consensus 1151 -----------------------------aL~~~-----------------------------~~~------~~~~~--- 1163 (1676)
T 3cu7_A 1151 -----------------------------GIRKA-----------------------------FDI------CPLVK--- 1163 (1676)
T ss_dssp -----------------------------HHHHT-----------------------------GGG------SCCHH---
T ss_pred -----------------------------HHHhc-----------------------------ccc------cCCcc---
Confidence 56554 210 00012
Q ss_pred eeeecccccccchhhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCCCCc--hHHHHHHHhhcccccCCc---ccccccC
Q psy5522 1145 TLMHYLVSKYPRMNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQHPV--KDVAFNLLESKAHNEDGK---KWWKRAE 1219 (1397)
Q Consensus 1145 ~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~~~~--~~~~~~~L~~~a~~~~~~---~~W~~~~ 1219 (1397)
...++.+|+.||++++++..++|++||+||||+|+|+.. +.+++++|++.|+.+++. +||..+.
T Consensus 1164 -----------~~~~i~~a~~yL~~~~~~~~~~y~~A~lA~Al~l~g~~~~~a~~~l~~L~~~a~~~~~~~~~~~w~~~~ 1232 (1676)
T 3cu7_A 1164 -----------IDTALIKADNFLLENTLPAQSTFTLAISAYALSLGDKTHPQFRSIVSALKREALVKGNPPIYRFWKDNL 1232 (1676)
T ss_dssp -----------HHHHHHHHHHHHHHHHSSCSCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHCEEETTTTSEEECCSCS
T ss_pred -----------cHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHhcCCchhhHHHHHHHHHhhhhhccCCccccCCCCCC
Confidence 456899999999999998999999999999999999998 567999999999987775 4997754
Q ss_pred CCCCCCCCCCCCCCcccchhhHHHHHHhhccCCcccchhhhhhhhhcccCCCCccccccC--------------------
Q psy5522 1220 RPEDKKNPWAQVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMS-------------------- 1279 (1397)
Q Consensus 1220 ~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT-------------------- 1279 (1397)
.+.... .++.+++.+||+|||||||++..++..++.+|++||.+|||.+|||.|||||
T Consensus 1233 ~~~~~~--~~~~~~~~~ve~tayaLlall~~~~~~~~~~iv~wL~~qr~~~Gg~~STQdT~~Al~AL~~y~~~~~~~~~~ 1310 (1676)
T 3cu7_A 1233 QHKDSS--VPNTGTARMVETTAYALLTSLNLKDINYVNPVIKWLSEEQRYGGGFYSTQDTINAIEGLTEYSLLVKQLRLS 1310 (1676)
T ss_dssp SCCSSC--CCSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSSSCCSTTTTHHHHHHHHHHHHHHSCCCCCC
T ss_pred CCcccc--ccCCCccchHHHHHHHHHHHHhcCChhHHHHHHHHHHhccCCCCCccccHHHHHHHHHHHHHHHHcCCCCCc
Confidence 322110 1224567899999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy5522 1280 -------------------------------------------------------------------------------- 1279 (1397)
Q Consensus 1280 -------------------------------------------------------------------------------- 1279 (1397)
T Consensus 1311 ~~v~v~~~~~~~~~~~~v~~~n~~~~~~~l~~~~~~~v~~~~G~G~~~~~v~~~Y~~~~~~~~~~~f~l~v~~~~~~~~~ 1390 (1676)
T 3cu7_A 1311 MDIDVSYKHKGALHNYKMTDKNFLGRPVEVLLNDDLIVSTGFGSGLATVHVTTVVHKTSTSEEVCSFYLKIDTQDIEASH 1390 (1676)
T ss_dssp CCCCEEESSSCCCCCCCCCSSSCSCCCEECCSSSCEEECCCSCCSCEEEEEEEEEEBSCCSSSCCSEEEEEEEECC----
T ss_pred EEEEEEeCCCCcceEEEECCCceEEEEEEecCCCcEEEEEEeeeEEEEEEEEEEEeccCCCcCCCcceEEEEeccccccc
Confidence
Q ss_pred ------------------------------------------------------------------------------C-
Q psy5522 1280 ------------------------------------------------------------------------------K- 1280 (1397)
Q Consensus 1280 ------------------------------------------------------------------------------~- 1280 (1397)
.
T Consensus 1391 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~s~maivdv~LpsGfe~~~~~l~~l~~~~~~~~~~~E~~~~~v~~Y~d~~~~~ 1470 (1676)
T 3cu7_A 1391 YRGYGNSDYKRIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSS 1470 (1676)
T ss_dssp --------CCEEEEEEEECCCTTCCSSCCCSEEEEEECCTTCEECHHHHHHHHSSTTCSCSBCCEETTEEEEEESCCCSS
T ss_pred ccccCCCcEEEEEEEEEEcCccccccCCCCcEEEEEecCcCCccCHHHHHHHhhccccceEEEEecCCEEEEEecccCCC
Confidence 3
Q ss_pred CccccceeccccccccccCceeEEEeeccccchhheeeeccccccccccccCCCC
Q psy5522 1281 KELCPTVSAFRTHKVAQQKPVPVSIYDYYDQSRRARMFYEPRVATLCDICEGEDC 1335 (1397)
Q Consensus 1281 ~~~c~~~~~~~~~~v~~~~p~~v~~ydyy~~~~~~~~~y~~~~~~~c~~c~~~~c 1335 (1397)
++.|+.|.+.|.++|+++|||+|+|||||+|+++|+.||++++.++|++|++++|
T Consensus 1471 ~~~~~~~~~~~~~~v~~~~Pa~v~vydyY~p~~~~~~~Y~~~~~~l~~~C~~~~C 1525 (1676)
T 3cu7_A 1471 DFLCVRFRIFELFEVGFLSPATFTVYEYHRPDKQCTMFYSTSNIKIQKVCEGAAC 1525 (1676)
T ss_dssp SCEEEEEEEECSSCCSSCCCEEEEEEETTEEEEEEEEEECSCCCCCCCCCSTTCH
T ss_pred CCEEEEEEEEEEeEeccccceEEEEEeccCCcceEEEEEcCCcchhhhccCCCce
Confidence 4689999999999999999999999999999999999999987779999999887
No 5
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=100.00 E-value=5.8e-160 Score=1662.72 Aligned_cols=1152 Identities=24% Similarity=0.363 Sum_probs=953.2
Q ss_pred CEEEEeeCeeecCCeEEEEEEeecCCccEEEEEEEEeecCCCCeeEEeEEEEEC--CCceeEEEEEcCCCC--C---c-e
Q psy5522 1 YYTVVAPKVLRPNGEYHVAVSTQAVSEATQVSVEVGGKQDSGGEFRTKQLLSVD--PFSTRIVKLDIGDLG--P---G-Q 72 (1397)
Q Consensus 1 ~y~v~~P~~lr~g~~~~v~v~l~~~~~~v~v~v~L~~~~~~~~~~~~~~~~~~~--~~~~~~~~f~vP~~~--~---~-~ 72 (1397)
+|+|++|++||+|++|+|||++++.+++++|+|+|++.+..+ .......+.++ ++++.|++|+||... . + .
T Consensus 25 ~y~v~~P~~lr~g~~e~v~v~~~~~~~~~~v~v~l~~~~~~~-~~~~~~~v~l~~~~~~~~~~~~~vp~~~~~~~~~~~~ 103 (1661)
T 2b39_A 25 MYSMITPNILRLESEETVVLEAHGGQGTIQVSVTVHDFPAKK-QVLSNENTQLNSNNGYLSTVTIKIPASKELKSDKGHK 103 (1661)
T ss_dssp -----CBSEECTTSEEEEEEECTTCCSEEECCCCBCCSSSCC-SCCBCCCCEEETTTTSEEEEEEECCCCTTCCCTTCCC
T ss_pred eEEEEECCeEecCCceEEEEEEECCCCCEEEEEEEEecCCCc-eEeeeeeEEEcCCCCcccceEEEcCcccccCccCccc
Confidence 599999999999999999999999999999999998622221 12233444443 466899999999542 1 2 3
Q ss_pred e-EEEEEecCceeeEeeEEEEEEecccEEEEEcCCCcccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeee
Q psy5522 73 Y-NLTVKGSGSLNFYNSTGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTR 151 (1397)
Q Consensus 73 ~-~l~v~g~~~~~f~~~~~v~~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~ 151 (1397)
| +|.|+| +++.| ++.|+++.+++.+||||||||||||||||||++++|.+++|. +.+++|+|.||+|++|.|+..
T Consensus 104 yv~l~~~g-~~~~~--~~~v~~~~~~~~~fiqTDR~iYrPGqtV~~r~i~~d~~~~p~-~~~v~v~l~dP~g~~i~~~~~ 179 (1661)
T 2b39_A 104 FVTVVATF-GNVQV--EKVVLISLQSGYLFIQTDKTIYTPGSTVLYRVFTVDHKLLPV-GQTVFITIETPDGIPVKRDSK 179 (1661)
T ss_dssp CEEEEEEE-TTEEE--EEEEEECCCCCEEEEEESCSEECTTSEEEEEEEEECTTSCCC-CCCEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEe-CCeEE--EEEEEEecCCCcEEEecCCCccCCCCEEEEEEEEECCCCccc-CceEEEEEECCCCCEEeeeee
Confidence 5 899999 45544 788999999999999999999999999999999999999996 588999999999999999654
Q ss_pred e-ccCCceeeeeeecCCCCCCeeEEEEEEEcC---eEEEEEEEEeeecCCcEEEEEeCCCceEeeC--CeEEEEEEEEEe
Q psy5522 152 A-LTTRGVFSADLQLSKSPVLGDWNITINVLD---QKFTKRFTVAEYVLPKFEVNVNVPPHATFKD--SKVVISVNAKYT 225 (1397)
Q Consensus 152 ~-~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~---~~~~~~F~VeEYvLPkFeV~v~~p~~i~~~~--~~~~v~v~AkYt 225 (1397)
. ++.+|+++++|+||+++++|.|+|++..++ ...+++|+|||||||+|||++++|+..+..+ +.+.++|||+|+
T Consensus 180 ~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~~~~F~VeEYvlP~feV~i~~~~~~~~~~~~~~~~v~v~a~Y~ 259 (1661)
T 2b39_A 180 SSQNQFGILTLSWNIPELVNMGVWKIKAYYEDSPQQVFSAEFEVKEYVLPSFEVQLEPEEKFYYIDDPDGLKVNIIARFL 259 (1661)
T ss_dssp CTTTTTSCCEEEEECCSSCCCEEEEEEEEETTEEEEEEEEEEEECCCCCCSBCCEEECSSSSCCSSCSSCCCEEEECBBS
T ss_pred cccccCCeEeeeeeCCCCccccceEEEEEeecCCCceEEEEEEEEEccCCcEEEEEEcCcceEecCCCcEEEEEEEEEEc
Confidence 4 348999999999999999999999999874 4678999999999999999999999877666 899999999999
Q ss_pred cCccccceEEEEEEeccccCccccccccceeEEeecCceEEEEEechhhhcc---cc---c-cceEEEEEEEEEE-CCcc
Q psy5522 226 YGKPVKGEATITAYPTIFSGVIQPLFQTPVRKVVPIDGKTVIEFDVVKELQL---TD---E-YERNIHFDVAVEE-ALTG 297 (1397)
Q Consensus 226 yGkPV~G~v~v~v~~~~~~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~---~~---~-~~~~l~V~a~VtE-~gTG 297 (1397)
||+||+|++++++++... + ....++..+....+.||++.++++... +.. .. . ..+++.|+|+|+| .|+|
T Consensus 260 ~G~Pv~G~~~v~~~~~~~-~-~~~~~~~~~~~~~~~dg~G~~~l~~~~-~~~~~~~~~~~~~~~~~~~v~a~V~e~~gg~ 336 (1661)
T 2b39_A 260 YGEQVDGTAFVIFGVQDG-D-RRISLTHSLTRVPINDGNGEAILKRQV-LLNGVQPSRADALVGKSIYVSATVILQSGSD 336 (1661)
T ss_dssp SSCBCCEEEEEEEEEECS-S-CEECCGGGCEEEEESSSCEEECCCTTT-TSSSCTTCHHHHSSSCBCEEEEEEEETTTCC
T ss_pred CCCceeeEEEEEEEEecC-C-cccccCcceeeeEecCCeEEEEEehHH-hhcccccCChhhccCcEEEEEEEEEEcCCce
Confidence 999999999888877521 1 112234445455556676666666543 221 11 1 1368999999999 7878
Q ss_pred eEEeeEEEEEEEEeeeEEEEEecCCcccCCCeEEEEEEEEccCCCccCCCCceEEEEEeeeccccccceeeEeeCCCeeE
Q psy5522 298 RRQNNTGSVVFHKHKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGMI 377 (1397)
Q Consensus 298 ~~~~~~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~~ 377 (1397)
.+++.+..++|..+++.|.|.+.+.+|+||+|+.++|+++|+||+|+++. .|.+.. ...+.+++++|.+
T Consensus 337 ~~~~~~~~i~i~~~~~~i~~~~~~~~~~~g~~~~~~v~~~~~dG~p~~~~--~v~v~~---------~~~~~~t~~~G~~ 405 (1661)
T 2b39_A 337 MVEAERTGIPIVTSPYQIHFTKTPKFFKPAMPFDLMVYVTNPDGSPARHI--PVVTQG---------SNVQSLTQDDGVA 405 (1661)
T ss_dssp CCEECCCCCBCCSCSSBCCBSSCCSEECSSEEEECCBBCBBTTTBCCSSC--CEEETT---------CCCCCCCSSSCBC
T ss_pred EEEeeeEEEEEEEeeEEEEEEeCCCccCCCCcEEEEEEEEcCCCCCcCCc--eEEEec---------cceEEEECCCCeE
Confidence 88888899999999999999888999999999999999999999999963 454421 1124688999999
Q ss_pred EEEEeCCCCCceeEEEEEEEecCcc-------eEEEEEEeecCC--CCCeEEEEecCCCCCCCCeEEEEEEe---cC---
Q psy5522 378 KLVYYPPANENVTTLGIEAEYLDIK-------EWFSTISASESP--SNSFIQAALLTQNPKVNKDVELEINS---TA--- 442 (1397)
Q Consensus 378 ~f~i~~~~~~~~~~l~l~a~~~~~~-------~~~~~v~~~~S~--s~s~L~i~~~~~~~~~G~~~~v~v~s---~~--- 442 (1397)
.|+|+++.+++. ++|++++++.. ...+.+.+|+++ +++||+|..+++.|+||++++|.|++ +.
T Consensus 406 ~~~i~~~~~~g~--y~l~v~~~d~~~~~~~~a~~~~~~~~~~~~~~s~~~l~l~~~k~~~~~Ge~~~v~v~~~~~p~~~~ 483 (1661)
T 2b39_A 406 KLSINTQNKRDP--LTITVRTKKDNIPEGRQATRTMQALPYNTQGNSNNYLHLSVPRVELKPGETLNVNFHLRTDPGEQA 483 (1661)
T ss_dssp CCEEEECSCCSC--EEEEEEECCSSSCTTSCCCEEEEEEECCCGGGCCCEEEEECCCSCCCTTCEEEEEEEEECCTTTGG
T ss_pred EEEEECCCCCcE--EEEEEEEcCcccccccccceEEEEEeecCCcCCCCcEEEEecCcCcCCCCEEEEEEEECCCccccC
Confidence 999998876667 45555555432 345666667666 88999999999999999999999986 32
Q ss_pred CcceEEEEEEeCCeEEEEEEEEecCCceeEEEEEeeCCCCCceeEEEEEEEec----CCeEEEEeEEEEEc-ccccceee
Q psy5522 443 PLKYISYQVLGRGDVIMADTITVPGNKMSTVIRFLATYAMAPTAHVIVQYVRE----DGEVVADGLDLELE-GGLQNFVS 517 (1397)
Q Consensus 443 ~~~~~~ylV~srG~Iv~~~~~~~~~~~~~~~~~l~vt~~maP~a~l~vy~v~~----~gevvads~~~~V~-~~f~nkV~ 517 (1397)
+..+++|+|++||+|+..+++.+..+++..+++|+++++|+|++++++|+++| +||+++|+++|+|+ .| .++|+
T Consensus 484 ~~~~~~y~v~s~g~il~~~~~~~~~~~~~~~~~i~vt~~~~P~~~v~vy~v~p~~~~~ge~vads~~i~v~~~~-~~~L~ 562 (1661)
T 2b39_A 484 KIRYYTYMIMNKGKLLKVGRQYREPGQDLVVLPLTITSDFIPSFRLVAYYTLINAKGQREVVADSVWVDVKDSC-MGTLV 562 (1661)
T ss_dssp GCCEEEEEEECSSSEEEEEEEECCTTCSCEEEEEECCGGGSSCEEEEEEECCCCTTSCCCCEEEEEEECCCSCC-SSCCE
T ss_pred ceeEEEEEEEECCeEEEccEEEecCCCcEEEEEeecCcccCCcEEEEEEEEecccCCCCeEEEEEEEEEEcccc-cceEE
Confidence 24468999999999999999998634467899999999999999999999995 89999999999997 56 68999
Q ss_pred EEec---CCCCCCCceEEEEEEecCCcEEEEEEEeeecccccCCCCCChhHHhHhccccCCCCCCCCccccccccccCCC
Q psy5522 518 ANVS---PDETEPGSNIQINLEAKPNSYIGLLAVDQKVLLLKTGNDIGKEDVMRELRSYDETDTSKLPLVENLRERYPGS 594 (1397)
Q Consensus 518 l~~s---~~~~~Pg~~v~l~V~a~p~S~v~L~aVD~sVllL~~~~~lt~~~v~~~l~~y~~~~~~~~~~~~~~~~~~p~~ 594 (1397)
|+|+ +++++||++++|+|+++|+|+|+|+|||+||++|+++++||+++||+.+..|+.+|+ + + ++
T Consensus 563 v~~~st~~~~~~Pg~~v~l~V~~~~~s~v~L~aVD~svl~L~~~~~lt~~~v~~~l~~~~~~~~--------~-~---~~ 630 (1661)
T 2b39_A 563 VKNGGKEEKHHRPGQQITLKIEADQGARVGLVAVDKGVFVLNKKNKLTQRKIWDVVEKADIGCT--------P-G---SG 630 (1661)
T ss_dssp EEESSCCCSCCCTTCEEEEEEEECTTCBEEEEEECHHHHTTSGGGSCCHHHHHHHHTTSSSCCC--------S-B---CC
T ss_pred EEeccCCccccCCCCcEEEEEEeCCCCEEEEEEEchhhhhcCCcccCCHHHHHhhhhhccCCCC--------C-C---CC
Confidence 9994 899999999999999999999999999999999999999999999999999987653 1 1 46
Q ss_pred cchhhHhhhcCeEEEeccccc----ccCcccc-----cccC-----------CCCC-------CCcccchh---------
Q psy5522 595 FTAQATFEKAGAIVMTNGYVH----ERNPWVY-----YKSL-----------NDPP-------DDMLDGEE--------- 638 (1397)
Q Consensus 595 ~d~~~~f~~~Gl~v~Tn~~~~----~~~~~~~-----~~~~-----------~~~~-------~~~~~~~~--------- 638 (1397)
.|.+++|+++||.++||..+. .+..|.. .+.. .|.. +|+....+
T Consensus 631 ~d~~~~f~~~gl~v~t~~~~~~~~r~~~~c~~~~~r~~rs~~~~~~~~~~~~~y~~~~~~c~~dg~~~~~~~~~~~~r~~ 710 (1661)
T 2b39_A 631 RNYAGVFTDAGLTLKTSQGLETQQRADPQCPQPATRRRRSVQLMEKRMDKAGQYSSDLRKCCEDGMRDNPMKFPCQRRAQ 710 (1661)
T ss_dssp SHHHHHHHHTTBCCCSSSCCCCCCCCCSSCCC-------CCHHHHHHHHHHHTCCTTHHHHHHHTTSCCTTCCCHHHHGG
T ss_pred cchhhhhhhCCeEEEecCCcCcccccCcCCcccccccccchhhhhhhhhhhhhhhhhhhhhhhcccccCccccchhhhhh
Confidence 788899999999999987642 1222210 0000 0100 11100000
Q ss_pred ----------------------------------hccccccc--cccccceecccCcceeEEE-EEe---ccCc--eEEE
Q psy5522 639 ----------------------------------QLLSQVTT--SVTQLTVRKHFPETWLFQM-EET---GFDG--KVMV 676 (1397)
Q Consensus 639 ----------------------------------~~~~~~~~--~~~~~~vR~~FpETwiW~~-~~~---~~~G--~a~v 676 (1397)
+......+ ....+.+|++|||||+|.+ +.+ |++| ++++
T Consensus 711 ~~~~g~~~~~~f~~cc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vR~~Fpetwlw~~~~~l~~td~~G~~~~~v 790 (1661)
T 2b39_A 711 FILQGDACVKAFLDCCEYITQLRQQHSRDGALELARSDLDDDIIPEEDIISRSQFPESWLWTVIEDLKQADKNGISTKLM 790 (1661)
T ss_dssp GBCSCHHHHHHHHHHHHHHHHHHHHHSTTSCC-------CCCCCCTTTCCCCCCCCCCEEEEEECCCCCCCTTSCEEEEE
T ss_pred hcccchHHHHHHHHhhhhhhhhhhhhccccccccccccccccccccccccccccCCccceecceeeccccCCCCceeeEE
Confidence 00000000 1235679999999999999 666 8999 7999
Q ss_pred EEEcCCccccEEEEEEEEeCCCceeeeeCCeeEEEeeeEEEEecCCceeeeCCEEEEEEEEEcCCC-ccEEEEEEEeecC
Q psy5522 677 NEKVPDSITSWVLSAFSVDSLYGLGLMDMPKKLRVFRPFFISLDLPYSVMRGEVVAIPVVVFNYLS-QDLVADVTLENVG 755 (1397)
Q Consensus 677 ~~tvPDtiT~W~~~Afa~s~~~G~G~a~~~~~l~vfkpffv~l~LPysv~rGE~~~l~~~VfNyl~-~~~~v~v~L~~s~ 755 (1397)
+++|||+||+|+++|||++++.|||++ ++.+++|||||||+++|||||+|||++.|+++||||++ ++++|+|+|..++
T Consensus 791 ~~~lPDsiTtWrv~ava~s~~~g~G~a-~~~~v~v~kpf~v~~~LP~sv~~GD~~~i~~~V~N~~~~~~~~v~v~l~~~~ 869 (1661)
T 2b39_A 791 NVFLKDSITTWEILAVSLSDKKGICVA-DPYEVTVMQDFFIDLRLPYSVVRNEQVEIRAILYNYREAENLKVRVELLYNP 869 (1661)
T ss_dssp EEECCSSCSEEEEEECEEETTTEEECC-CCEEEECCCSEEEEEECCSCEESSCEEEEEEEEEECCTTCCEEEEEEECCCT
T ss_pred EeeCCCCceeEEEEEEEECCCCceeec-CceEEEEEeeEEEEecCCcEEEeCCEEEEEEEEEcCCCCccEEEEEEEcCCC
Confidence 999999999999999999998999999 68999999999999999999999999999999999999 9999999999999
Q ss_pred CeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeEEEEEEEeceeeeEEEEEEEEeCC--CCceeEEEEEecCCCeee-
Q psy5522 756 QFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNL--AGDSMEGKLLVKPEGETQ- 832 (1397)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~p~~lG~v~itV~A~~~~--~~D~v~k~L~V~peG~~~- 832 (1397)
+++..... ....+++++|+++++++++|+|+|.++|.++|+|+|.+.. .+|+++|.|+|+|||++.
T Consensus 870 ~~~~~~~~-----------~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~v~a~~~~~~~~D~v~~~L~V~p~g~~~~ 938 (1661)
T 2b39_A 870 AFCSLATA-----------KKRHQQTITIPARSSVAVPYVIVPLKIGLHEVEVKAAVYNHFISDGVKKTLKVVPEGVRVN 938 (1661)
T ss_dssp TEECSSCS-----------SCCCEEEEEECTTCEEEEEEEEEECSCEEEEEEEEEEESSSSSCEEEEEEEEEECSSEEEE
T ss_pred CeEeecCC-----------CCcceEEEEECCCCcEEEEEEEEEcccCeEEEEEEEEecCCCCCceEEEEEEEecCCeeEE
Confidence 98754221 1134689999999999999999999999999999999853 799999999999999964
Q ss_pred EEEEEEEEecCC---CceeEEEEEecCCCCcCCCCcE-EEEEEEcccccCcccC------cchhhccCCCchhhhhcccc
Q psy5522 833 YKNKAIFVDLRK---NKTFSVNVTLDMPKNIVPGSEH-VEVSAVGDLLGPSIPN------LANLIKMPFGCGEQNMLNFV 902 (1397)
Q Consensus 833 ~~t~s~~l~~~~---~~~~~~~i~l~~P~~~v~gs~~-~~vsv~gd~l~~~~~~------l~~Ll~~P~GCgEQ~m~~~~ 902 (1397)
+.+++.+||+++ ++..+.++++.+|.+++|||.+ ++|++.|+++++++++ |++|++|||||+||||++++
T Consensus 939 ~~~~s~~l~~~~~~~~~~~~~~~~~~~p~~~vp~s~~~~~vsv~g~~~~~~l~~~~~~~~l~~L~~~PyGC~EQ~~s~~~ 1018 (1661)
T 2b39_A 939 KTVAVRTLNPEHLGQGGVQREEVPAADLSDQVPDTESETKILLQGTPVAQMTEDAIDGERLKHLIQTPSGCGEQNMIGMT 1018 (1661)
T ss_dssp EEEEEEEECHHHHCSSSCEEEEECCCCCSSBCTTCCCEEEEEEESSTTHHHHHHHSSTTTGGGSSSSCCCSTTGGGGGTH
T ss_pred EEEEEEEEeccccCCCcceEEEEeccCccccCCCCceeEEEEEecccchhhhhcccchhhhHHHhhcCCCchhhhhhhcc
Confidence 588999999851 1246788899999999999998 9999999999999965 99999999999999999999
Q ss_pred hHHHHHHHHHHhcccc---HHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCCcchhHHHHHHHHHccCCCccCH
Q psy5522 903 PNIVVLEYLKKTYQLT---DAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFRQAASHTTIDE 979 (1397)
Q Consensus 903 p~i~~l~yL~~~~~l~---~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl~~~~~a~~~i~vd~ 979 (1397)
||+|+++||+.++|+. ++.+++|+++|+.||+|+|.||++||||+||++. .+|+||||||+++|.+|+++++||+
T Consensus 1019 P~~~~~~yL~~~~q~~~~~~~~~~~~~~~i~~g~~r~l~~q~~dGsfs~w~~~--~~s~wLTAyv~~~l~~A~~~~~v~~ 1096 (1661)
T 2b39_A 1019 PTVIAVHYLDSTDQWEKFGLEKRQESLELIRKGYTQQLAFRQKSSAYAAFQYR--PPSTWLTAYVVKVFALAANLIAIDS 1096 (1661)
T ss_dssp HHHHHHHHHHHHTCGGGSCSHHHHHHHHHHHHHHHHHHTTBCTTSCBCSSTTS--CCCHHHHHHHHHHHHHHTTTSCCCH
T ss_pred cHHHHHHHHHhcCcccccCHHHHHHHHHHHHHHHHHHHHhhcCCCCccccCCC--CCchhhhHHHHHHHHhhhhcccCCH
Confidence 9999999999999876 7899999999999999999999999999999864 6899999999999999999999999
Q ss_pred HHHHHHHHHHHh-cccCCCccccchHhHHHhhcCCCCc----cEEEEEEEEeccccceeEEEEeeeeEEEEEEEEEEeec
Q psy5522 980 SVILEALAWLSS-NQAVNGSFPEVGKVSHADMQGGAAK----GLALTAYTLLPKKTRAVNMTATGSGFAVVYISYQYNIN 1054 (1397)
Q Consensus 980 ~~~~~~~~WL~~-~q~~~G~F~stqdvl~al~~~~~~~----~v~lt~~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~ 1054 (1397)
.+++++++||.+ +|+.+|+|.+...+++..++++... ++.+++|+.+
T Consensus 1097 ~~l~~a~~~L~~~~q~~~g~f~~~~~~~~~~~~gg~~~~~~~~~~ltAyvl~---------------------------- 1148 (1661)
T 2b39_A 1097 KDLCETVKWLILEKQKPDGIFQEDGPVIHQEMIGGFRDTREKDVSLTAFVLI---------------------------- 1148 (1661)
T ss_dssp HHHHHHHHHHHHHTBCTTSCBCCCSCCCCTTSCCCTTCCTTSSHHHHHHHHH----------------------------
T ss_pred HHHHHHHHHhhHhhCCCCCccccccceechhhcCCccccccCccccHHHHHH----------------------------
Confidence 999999999994 9999999998777777777765432 5667777655
Q ss_pred cCCCCCceeeccccccCCCCCceEEEEEEeecCCCCccEEEEEecCCcccccCCCCchhhcccCceeEEEEeCCeEEEEE
Q psy5522 1055 VTGAWPMFTLDPQVDKNSDSNHLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKRVETKNGNTMVVL 1134 (1397)
Q Consensus 1055 ~~~~~~~f~l~v~~~~~~~~~~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~~~e~~~~~~~v~l 1134 (1397)
||+|.+-+. . +.
T Consensus 1149 ---------------------------------------aL~~~~~~~-----~-------------------~~----- 1160 (1661)
T 2b39_A 1149 ---------------------------------------ALHEAKDIC-----E-------------------AQ----- 1160 (1661)
T ss_dssp ---------------------------------------HHHHTTTTT-----T-------------------TT-----
T ss_pred ---------------------------------------HHHhccccc-----c-------------------cc-----
Confidence 565541100 0 01
Q ss_pred EeeecCCccceeeecccccccchhhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCCCCchHHHHHHHhhcccccCCccc
Q psy5522 1135 YFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKW 1214 (1397)
Q Consensus 1135 Y~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~~~~~~~~~~~L~~~a~~~~~~~~ 1214 (1397)
++. ...++++|+.||+++++...++|++|++||||+|+|+. +.+++++|.+.+. +..|
T Consensus 1161 ----~~~--------------~~~~i~~a~~yL~~~~~~~~~~y~~A~layAL~l~g~~-a~~~l~~L~~~~~---~~~~ 1218 (1661)
T 2b39_A 1161 ----VNS--------------LGRSIAKAGDFLENHYRELRRPYTVAIAAYALALLGKL-EGDRLTKFLNTAK---EKNR 1218 (1661)
T ss_dssp ----CSS--------------HHHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHTTCC-CHHHHHHHHHHSB---TTTB
T ss_pred ----Ccc--------------hhHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHcCCc-HHHHHHHHHhhcc---CCCC
Confidence 122 56789999999999999889999999999999999999 7789999998775 5579
Q ss_pred ccccCCCCCCCCCCCCCCCcccchhhHHHHHHhhccCCcccchhhhhhhhhcccCCCCccccccCCCccccceecccccc
Q psy5522 1215 WKRAERPEDKKNPWAQVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTHK 1294 (1397)
Q Consensus 1215 W~~~~~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT~~~~c~~~~~~~~~~ 1294 (1397)
|.... .++.+||+||||||+++..++...|.+|++||.+|||.+|||.|||||
T Consensus 1219 W~~~~------------~~~~~vE~tayaLlall~~~~~~~~~~iv~wL~~qr~~~gg~~STqdT--------------- 1271 (1661)
T 2b39_A 1219 WEEPN------------QKLYNVEATSYALLALLARKDYDTTPPVVRWLNEQRYYGGGYGSTQAT--------------- 1271 (1661)
T ss_dssp CCCSS------------CHHHHHHHHHHHHHHHHHHTCTTTSHHHHHHHHHCCTBTTBBCSHHHH---------------
T ss_pred CCCCC------------CCcchHHHHHHHHHHHHhcCChhhHHHHHHHHHhcccCCCCcccchHH---------------
Confidence 97532 246799999999999999999999999999999999999999999999
Q ss_pred ccccCceeEEEeeccccchhheeeeccccccccccccCCCCCCccchhHHHHHHHhhhhcc-CCCcEEEEEEeCC-Ccee
Q psy5522 1295 VAQQKPVPVSIYDYYDQSRRARMFYEPRVATLCDICEGEDCSKDTVIGLYALAQLAEKVLA-RNNDVSISFKYLN-GQSS 1372 (1397)
Q Consensus 1295 v~~~~p~~v~~ydyy~~~~~~~~~y~~~~~~~c~~c~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~ 1372 (1397)
++|||||++|+++++. .+.++.|+|.+.+ +...
T Consensus 1272 ---------------------------------------------~~Al~AL~~y~~~~~~~~~~~~~v~v~~~~~~~~~ 1306 (1661)
T 2b39_A 1272 ---------------------------------------------FMVFQALAQYQKDVPDHKELNLDVSIQLPSRNSAV 1306 (1661)
T ss_dssp ---------------------------------------------HHHHHHHHHHHHHSCCGGGCEECCEEBCSSSSSCE
T ss_pred ---------------------------------------------HHHHHHHHHHHHHcCcCCCCcEEEEEEeCCCccce
Confidence 9999999999999988 5678888887653 4567
Q ss_pred eEEEeCCCceEEEeeccc
Q psy5522 1373 EMSVNRLNNMILQKNEVY 1390 (1397)
Q Consensus 1373 ~~~~~~~n~~~~q~~~~~ 1390 (1397)
.|+||.+|++++|..+++
T Consensus 1307 ~~~v~~~n~~~~~~~~~~ 1324 (1661)
T 2b39_A 1307 RHRILWESASLLRSEETK 1324 (1661)
T ss_dssp ECCEESSSSCSEEEECCS
T ss_pred EEEECCcCcceEEEEEec
Confidence 999999999999999885
No 6
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=100.00 E-value=1.1e-90 Score=876.26 Aligned_cols=582 Identities=20% Similarity=0.290 Sum_probs=485.3
Q ss_pred CEEEEeeCeeecCCeEEEEEEeecCCccEEEEEEEEeecCCCCeeEEeEEEEEC--CCceeEEEEEcCCC--CCc---ee
Q psy5522 1 YYTVVAPKVLRPNGEYHVAVSTQAVSEATQVSVEVGGKQDSGGEFRTKQLLSVD--PFSTRIVKLDIGDL--GPG---QY 73 (1397)
Q Consensus 1 ~y~v~~P~~lr~g~~~~v~v~l~~~~~~v~v~v~L~~~~~~~~~~~~~~~~~~~--~~~~~~~~f~vP~~--~~~---~~ 73 (1397)
.|+|++|++||+|++|+|||++++.+++++++++|+..+.. ......+.+.++ ++++.|++|+||.. .++ .+
T Consensus 2 ~y~v~~P~~lr~g~~e~v~v~l~~~~~~v~v~v~l~~~~~~-~~~~~~~~v~l~~~~~~~~~~~~~vp~~~~~~~~~~~~ 80 (627)
T 3hrz_A 2 LYTLITPAVLRTDTEEQILVEAHGDSTPKQLDIFVHDFPRK-QKTLFQTRVDMNPAGGMLVTPTIEIPAKEVSTDSRQNQ 80 (627)
T ss_dssp EEEEEEESEEEBTSCEECEEEEESCCCCEEEEEEEEEETTC-CSEEEEEEEEECGGGTTEECCEECBCGGGSCCC---CC
T ss_pred eEEEEeCCeEeCCCccEEEEEEECCCCCEEEEEEEEECCCC-cEEEEEEEEEecCCCCeEEEEEEEeCCcccCCCccceE
Confidence 49999999999999999999999999999999999854222 123333444454 35678999999953 233 23
Q ss_pred EEEEEecCceeeEeeEEEEEEecccEEEEEcCCCcccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeec
Q psy5522 74 NLTVKGSGSLNFYNSTGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRAL 153 (1397)
Q Consensus 74 ~l~v~g~~~~~f~~~~~v~~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~ 153 (1397)
.|.|++.++ .|.++++|+++.+++.+|||||||||||||||+||++++|.+++|. +.++.|+|.||+|++|.+|. ..
T Consensus 81 ~v~v~~~~~-~~~~~~~v~v~~~~~~~fi~TDr~iYrPGqtV~~r~i~~d~~~~p~-~~~~~v~i~dP~g~~i~~~~-~~ 157 (627)
T 3hrz_A 81 YVVVQVTGP-QVRLEKVVLLSYQSSFLFIQTDKGIYTPGSPVLYRVFSMDHNTSKM-NKTVIVEFQTPEGILVSSNS-VD 157 (627)
T ss_dssp EEEEEEEET-TEEEEEEEEEECCCSCEEEEESCSEECTTCEECEEEEESCC--------CEEEEEECTTCCEEEEEE-EB
T ss_pred EEEEEEEcC-CceEEEEEEEEcCCCcEEEECCCCccCCCCEEEEEEEEECCCCccc-CccEEEEEECCCCCEEEEEE-ec
Confidence 455555322 3577899999999999999999999999999999999999999997 88999999999999999654 44
Q ss_pred cCCceeeeeeecCCCCCCeeEEEEEEEcC--eEEEEEEEEeeecCCcEEEEEeCCCceEe-e-CCeEEEEEEEEEecCcc
Q psy5522 154 TTRGVFSADLQLSKSPVLGDWNITINVLD--QKFTKRFTVAEYVLPKFEVNVNVPPHATF-K-DSKVVISVNAKYTYGKP 229 (1397)
Q Consensus 154 ~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~--~~~~~~F~VeEYvLPkFeV~v~~p~~i~~-~-~~~~~v~v~AkYtyGkP 229 (1397)
.. ++++|+||+++++|.|+|++..++ ...+++|+|||||||+|||++++|+..+. . ++.+.+++||+|+||+|
T Consensus 158 ~~---~~~~f~Lp~~~~~G~w~i~v~~~~~~~~~~~~F~Veeyv~P~feV~~~~~~~~~~~~~~~~~~~~v~a~y~~G~P 234 (627)
T 3hrz_A 158 LN---FFWPYNLPDLVSLGTWRIVAKYEHSPENYTAYFDVRKYVLPSFEVRLQPSEKFFYIDGNENFHVSITARYLYGEE 234 (627)
T ss_dssp TT---BCCCEECCSSCCCEEEEEEEEETTCSCCEEEEEEECCCCCCSEEEEEEESSSEEETTCCCCEEEEEEEEETTSCB
T ss_pred cc---eEEEEECCCCCCCeeEEEEEEECCCceEEEEEEEEeEEECCcEEEEEecCcceEEecCCCEEEEEEEEEECCCCE
Confidence 33 899999999999999999999976 47899999999999999999999987653 5 89999999999999999
Q ss_pred ccceEEEEEEeccccCccccccccceeEEeecCceEEEEEechhh---hccc-cccceEEEEEEEEE-ECCcceEEeeEE
Q psy5522 230 VKGEATITAYPTIFSGVIQPLFQTPVRKVVPIDGKTVIEFDVVKE---LQLT-DEYERNIHFDVAVE-EALTGRRQNNTG 304 (1397)
Q Consensus 230 V~G~v~v~v~~~~~~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~---~~~~-~~~~~~l~V~a~Vt-E~gTG~~~~~~~ 304 (1397)
|+|++++++|...+ + ....+|+.++.....+|++.+.|+.... +... ..+.+.++|+|+|+ |+|||++++++.
T Consensus 235 v~G~v~v~~~~~~~-~-~~~~~~~~~~~~~~~~G~g~~~l~~~~~~~~~~~~~~~~~~~l~v~a~V~~e~gt~~~~~~~~ 312 (627)
T 3hrz_A 235 VEGVAFVLFGVKID-D-AKKSIPDSLTRIPIIDGDGKATLKRDTFRSRFPNLNELVGHTLYASVTVMTESGSDMVVTEQS 312 (627)
T ss_dssp CCEEEEEEEEEEET-T-EEEECGGGCEEEEEBTTEEEEEECHHHHHHHCCCGGGGTTCEEEEEEEEEETTSSCEEEEEEE
T ss_pred eccEEEEEEEEccC-C-ceeeccchheeEEecCCeEEEEEEHHHhhhhhcchhhhcCcEEEEEEEEEEecCCeEEEcccc
Confidence 99999999997632 1 1223555555566678888888876541 1111 12357899999998 889999999999
Q ss_pred EEEEEEeeeEEEEEecCCcccCCCeEEEEEEEEccCCCccCCCCceEEEEEeeeccccccceeeEeeCCCeeEEEEEeCC
Q psy5522 305 SVVFHKHKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGMIKLVYYPP 384 (1397)
Q Consensus 305 ~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~~~f~i~~~ 384 (1397)
.+.|+.++|+|.|.+++.+||||+||.++|+++++||+|+++ ..|.+.. ...+++||++|++.|+|+++
T Consensus 313 ~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dg~P~~~--~~V~v~~---------~~~~~~td~~G~a~f~i~t~ 381 (627)
T 3hrz_A 313 GIHIVASPYQIHFTKTPKYFKPGMPYELTVYVTNPDGSPAAH--VPVVSEA---------FHSMGTTLSDGTAKLILNIP 381 (627)
T ss_dssp EEEEESSSCEEECTTSCSEECTTSCEEEEEEEECTTSCBCTT--CEEEEGG---------GTEEEECCTTSEEEEEECCC
T ss_pred eEEEEeecEEEEEEeccccccCCCcEEEEEEEECCCCCcCCC--ceEEEEc---------CcceeEECCCCeEEEEEECC
Confidence 999999999999999999999999999999999999999995 3454421 12678999999999999998
Q ss_pred CCCceeEEEEEEEecCc-------ceEEEEEEeecCC--CCCeEEEEecCCCCCCCCeEEEEEEe--c----CCcceEEE
Q psy5522 385 ANENVTTLGIEAEYLDI-------KEWFSTISASESP--SNSFIQAALLTQNPKVNKDVELEINS--T----APLKYISY 449 (1397)
Q Consensus 385 ~~~~~~~l~l~a~~~~~-------~~~~~~v~~~~S~--s~s~L~i~~~~~~~~~G~~~~v~v~s--~----~~~~~~~y 449 (1397)
.+... ++|+|++++. ..+.+.+.+|+|+ |++||+|.++.++++||+++.|.+.. . .++.+|+|
T Consensus 382 ~~~~~--l~i~~~~~~~~~~~~~~~~~~~~~~~y~s~~~s~syL~i~~~~~~l~~G~~~~v~v~~~~~~~~~~~~~~f~Y 459 (627)
T 3hrz_A 382 LNAQS--LPITVRTNHGDLPRERQATKSMTAIAYQTQGGSGNYLHVAITSTEIKPGDNLPVNFNVKGNANSLKQIKYFTY 459 (627)
T ss_dssp TTCSE--EEEEEEECCTTSCGGGSCEEEEEEEECCCGGGCCCEEEEEECCCSCCTTCEEEEEEEEESCHHHHHTCCEEEE
T ss_pred CCCcE--EEEEEEeCCCCCCcccccccEEEEEEeeCCCCCCceEEEecCCCccCCCCEEEEEEEEecCCCCcccccEEEE
Confidence 66544 7888888753 2456777788887 99999999999999999999888764 2 34567999
Q ss_pred EEEeCCeEEEEEEEEecCCceeEEEEEeeCCCCCceeEEEEEEEecCCeEEEEeEEEEEcccccceeeEEecCCCCCCCc
Q psy5522 450 QVLGRGDVIMADTITVPGNKMSTVIRFLATYAMAPTAHVIVQYVREDGEVVADGLDLELEGGLQNFVSANVSPDETEPGS 529 (1397)
Q Consensus 450 lV~srG~Iv~~~~~~~~~~~~~~~~~l~vt~~maP~a~l~vy~v~~~gevvads~~~~V~~~f~nkV~l~~s~~~~~Pg~ 529 (1397)
+|++||+|+.+|++....+++.++|+|+++++|+|.+||+|||++++||+|||+++|+|++.|.|+|+|+|++++++||+
T Consensus 460 lV~srG~Iv~~g~~~~~~~~~~~s~~l~vt~~maP~arllvYyi~~~gEvVaDS~~~~Ve~~c~~~v~l~~s~~~~~Pg~ 539 (627)
T 3hrz_A 460 LILNKGKIFKVGRQPRRDGQNLVTMNLHITPDLIPSFRFVAYYQVGNNEIVADSVWVDVKDTCMGTLVVKGDNLIQMPGA 539 (627)
T ss_dssp EEEETTEEEEEEEEECCTTCSEEEEEEECCGGGCSEEEEEEEEEETTTEEEEEEEEEECCCCCSSCEEEECCCCCBCTTC
T ss_pred EEEECCcEEEEeEEEecCCccEEEEEEECCcccCccEEEEEEEEeCCCCEEEEEEEEEehhcccceEEEecCccccCCCC
Confidence 99999999999998654556889999999999999999999999999999999999999843368899999999999999
Q ss_pred eEEEEEEecCCcEEEEEEEeeecccccCCCCCChhHHhHhccccCCCCCCCCccccccccccCCCcchhhHhhhcCeEEE
Q psy5522 530 NIQINLEAKPNSYIGLLAVDQKVLLLKTGNDIGKEDVMRELRSYDETDTSKLPLVENLRERYPGSFTAQATFEKAGAIVM 609 (1397)
Q Consensus 530 ~v~l~V~a~p~S~v~L~aVD~sVllL~~~~~lt~~~v~~~l~~y~~~~~~~~~~~~~~~~~~p~~~d~~~~f~~~Gl~v~ 609 (1397)
+++|+|+|+|+|+|||+||||||++|+++|+||+++||+.|+.|+.+|. .+ ++.|.+++|++|||+++
T Consensus 540 ~v~L~v~a~p~S~vgL~aVDksV~lL~~~~~Lt~~~V~~~le~~d~gC~---------~g---~g~d~~~vf~~aGL~~~ 607 (627)
T 3hrz_A 540 AMKIKLEGDPGARVGLVAVDKAVYVLNDKYKISQAKIWDTIEKSDFGCT---------AG---SGQNNLGVFEDAGLALT 607 (627)
T ss_dssp EEEEEEEESTTCEEEEEEEEHHHHHHCCSSCCCHHHHHHHHHHTCSCCS---------SB---CCSSHHHHHHHHTEEEE
T ss_pred eEEEEEEeCCCCEEEEEEEehHhEEcCCcccCCHHHHHHHHhccCCCCC---------CC---CCCCHHHHHhhCCceEE
Confidence 9999999999999999999999999999999999999999999998863 11 67899999999999999
Q ss_pred ecccccc
Q psy5522 610 TNGYVHE 616 (1397)
Q Consensus 610 Tn~~~~~ 616 (1397)
||+.+..
T Consensus 608 Tn~~~~~ 614 (627)
T 3hrz_A 608 TSTNLNT 614 (627)
T ss_dssp ETTCCCC
T ss_pred ecCCCCc
Confidence 9998754
No 7
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=100.00 E-value=5.8e-94 Score=936.62 Aligned_cols=560 Identities=28% Similarity=0.434 Sum_probs=477.5
Q ss_pred ccccceecccCcceeEEEEEeccCceEEEEEEcCCccccEEEEEEEEeCCCceeeeeCCeeEEEeeeEEEEecCCceeee
Q psy5522 648 VTQLTVRKHFPETWLFQMEETGFDGKVMVNEKVPDSITSWVLSAFSVDSLYGLGLMDMPKKLRVFRPFFISLDLPYSVMR 727 (1397)
Q Consensus 648 ~~~~~vR~~FpETwiW~~~~~~~~G~a~v~~tvPDtiT~W~~~Afa~s~~~G~G~a~~~~~l~vfkpffv~l~LPysv~r 727 (1397)
...++||++|||||||+++.+ +|+++++|+|||+||+|+++|||+|++.|||++ +|.+++|||||||+++|||||+|
T Consensus 90 ~~~~~vR~~FpETwlw~~~~~--~g~~~~~~tlPDsiTtW~~~a~a~s~~~g~g~~-~~~~~~v~kpf~v~~~lP~~v~~ 166 (767)
T 4fxk_B 90 EDDIPVRSFFPENWLWRVETV--DRFQILTLWLPDSLTTWEIHGLSLSKTKGLCVA-TPVQLRVFREFHLHLRLPMSVRR 166 (767)
T ss_dssp CSSCCCCCCCCCCSCCCEEEE--ESCEEEEEEEESCCCEEEEECEEEETTTEEEEC-CCEEEECCCSEEEECCCCSCEET
T ss_pred cCCCCcccCCCccceeeeEec--CCeEEEEEECCCCCCEEEEEEEEEeCCCCceee-cceEEEEeccEEEecCCCCeecc
Confidence 346789999999999999877 588999999999999999999999999999999 68999999999999999999999
Q ss_pred CCEEEEEEEEEcCCCccEEEEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeEEEEEEEeceeeeEEEE
Q psy5522 728 GEVVAIPVVVFNYLSQDLVADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGSTTTFVITPKELGYIGIK 807 (1397)
Q Consensus 728 GE~~~l~~~VfNyl~~~~~v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~p~~lG~v~it 807 (1397)
||++.|+++||||++++++|+|+|+.++++++.... ...++++|+++++++++|+|+|+++|.++|+
T Consensus 167 GD~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~~~~~-------------~~~~~~~v~a~~~~~v~f~i~~~~~G~~~i~ 233 (767)
T 4fxk_B 167 FEQLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGGG-------------GLAQQVLVPAGSARPVAFSVVPTAAAAVSLK 233 (767)
T ss_dssp TCEEEECCEEEECSSSCEEEEEEECCCTTEECSSSS-------------CCCEEEEECSSCEEECCEEEEECSCSEEEEE
T ss_pred CCEEEEEEEEEECCCCCEEEEEEEEecCCeEEecCC-------------ceeEEEEEcCCCeEEEEEEEEECccCcEEEE
Confidence 999999999999999999999999999998764321 2367899999999999999999999999999
Q ss_pred EEEEeCC---CCceeEEEEEecCCCeeeEEEEEEEEecCCCceeEEEEEecCCCCcCCCCc-E----EEEE----EEccc
Q psy5522 808 VTATSNL---AGDSMEGKLLVKPEGETQYKNKAIFVDLRKNKTFSVNVTLDMPKNIVPGSE-H----VEVS----AVGDL 875 (1397)
Q Consensus 808 V~A~~~~---~~D~v~k~L~V~peG~~~~~t~s~~l~~~~~~~~~~~i~l~~P~~~v~gs~-~----~~vs----v~gd~ 875 (1397)
|+|.+.. .+|++++.|+|+|||+.++.+.+..+++.+....+.++....+++.+|++. + ++.+ +.|++
T Consensus 234 v~A~~~~~~~~~D~v~~~l~V~~~g~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~v~~~~~~~~v~~s~~~~~~~~~~~ 313 (767)
T 4fxk_B 234 VVARGSFEFPVGDAVSKVLQIEKEGAIHREELVYELNPLDHRGRTLEIPGNSDPNMIPDGDFNSYVRVTASDPLDTLGSE 313 (767)
T ss_dssp EEEEECTTCCCEEEEEEEEEEECSSEEEEEEEEEECCSSSSSSSSSEEEEECCCCCTTBCSSCCCEEEEEESCHHHHHHH
T ss_pred EEEEecCCCCccceEEEEEeecCCCeeEEEEEEEEecccccCceEEEeecCCCccccccccccceEEEeeEEEEEEecch
Confidence 9998763 689999999999999999999999999865544555666666666666553 2 2222 24556
Q ss_pred ccCcccCcchhhccCCCchhhhhcccchHHHHHHHHHHhcc---ccHHHHHHHHHHHHhccccceeeecCCCCccccCCC
Q psy5522 876 LGPSIPNLANLIKMPFGCGEQNMLNFVPNIVVLEYLKKTYQ---LTDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTT 952 (1397)
Q Consensus 876 l~~~~~~l~~Ll~~P~GCgEQ~m~~~~p~i~~l~yL~~~~~---l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~ 952 (1397)
++.++++|++|++|||||+||||++|+||+|+++||+.++| ++++++++|.++|++||||+++||++|||||||+++
T Consensus 314 ~~~~~~~l~~Li~~P~GC~EQ~ms~~~p~i~v~~yl~~t~q~~~l~~~~~~~a~~~l~~gyqrll~~q~~DGsfs~w~~~ 393 (767)
T 4fxk_B 314 GALSPGGVASLLRLPRGCGEQTMIYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYMRIQQFRKADGSYAAWLSR 393 (767)
T ss_dssp HTTSTTCGGGTSSCCCCSTTGGGGGTHHHHHHHHHHHHTCTTTTSCSSHHHHHHHHHHHHHHHHTTTBCTTSCBBSSSSS
T ss_pred hhhhhhhHHHHHhccccchhhHHHhhhhhhhHHHHHHhhhhhcccCHHHHHHHHHHHHHHHHHHHHhhcCCCCcccCCCC
Confidence 66788999999999999999999999999999999999998 778999999999999999999999999999999875
Q ss_pred CCCCCcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchHhHHHhhcCCC---CccEEEEEEEEeccc
Q psy5522 953 DPNGSTWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGKVSHADMQGGA---AKGLALTAYTLLPKK 1029 (1397)
Q Consensus 953 ~~~~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqdvl~al~~~~~---~~~v~lt~~v~lp~~ 1029 (1397)
.+|+||||||+++|.+|+++++||+..+.++++||.++|..+|+|.+.+.+++..+++++ +.++.||||+.+
T Consensus 394 --~~s~wLTAyV~~~l~~A~~~i~id~~~i~~a~~wL~~~Q~~~G~f~e~g~~~~~~~~gg~~~~~~~~~ltAyvli--- 468 (767)
T 4fxk_B 394 --DSSTWLTAFVLKVLSLAQEQVGGSPEKLQETSNWLLSQQQADGSFQDPCPVLDRSMQGGLVGNDETVALTAFVTI--- 468 (767)
T ss_dssp --CBCHHHHHHHHHHHHHTCSSSSCCHHHHHHHHHHHHHTBCTTSCBCCSSCSCCCCCCSSTTTHHHHHHHHHHHHH---
T ss_pred --CCCchhHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHhhhhcccchhcchhcchhhcCCcCCCccchhHHHHHHH---
Confidence 589999999999999999999999999999999999999999999999888888888765 346788998877
Q ss_pred cceeEEEEeeeeEEEEEEEEEEeeccCCCCCceeeccccccCCCCCceEEEEEEeecCCCCccEEEEEecCCcccccCCC
Q psy5522 1030 TRAVNMTATGSGFAVVYISYQYNINVTGAWPMFTLDPQVDKNSDSNHLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSD 1109 (1397)
Q Consensus 1030 ~~~~~v~~~G~G~~~~q~~~~Yn~~~~~~~~~f~l~v~~~~~~~~~~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~ 1109 (1397)
||+|..-+.. +
T Consensus 469 ----------------------------------------------------------------aL~e~~~~~~-----~ 479 (767)
T 4fxk_B 469 ----------------------------------------------------------------ALHHGLAVFQ-----D 479 (767)
T ss_dssp ----------------------------------------------------------------HHHHHHTTST-----T
T ss_pred ----------------------------------------------------------------HHHhcCCccc-----c
Confidence 7766522100 0
Q ss_pred CchhhcccCceeEEEEeCCeEEEEEEeeecCCccceeeecccccccchhhHHHHHHHHHhhcC-CCCchHHHHHHHHHHh
Q psy5522 1110 ALPSLQVSQNVKRVETKNGNTMVVLYFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYIVKNLA-GTEDAYAIAICSYALH 1188 (1397)
Q Consensus 1110 ~l~~l~~~~~i~~~e~~~~~~~v~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~-~~~~~y~~al~aYal~ 1188 (1397)
.. .. + +.. ....++++|+.||++++. ++.++|++||+||||+
T Consensus 480 ~~----------------~~----------~---------~~~--~~~~~i~ka~~~L~~~~~~~~~~~y~~Al~ayaL~ 522 (767)
T 4fxk_B 480 EG----------------AE----------P---------LKQ--RVEASISKANSFLGEKASAGLLGAHAAAITAYALS 522 (767)
T ss_dssp CC----------------CC----------S---------HHH--HHHHHHHHHHHHHHHHTTSCCCCHHHHHHHHHHHH
T ss_pred ch----------------hh----------h---------hHh--HHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHH
Confidence 00 00 0 000 034579999999988875 5789999999999999
Q ss_pred hCCCCch--HHHHHHHhhcccccCCcccccccCCCCC---------CC-CCCCCCCCcccchhhHHHHHHhhcc-CCccc
Q psy5522 1189 LAQHPVK--DVAFNLLESKAHNEDGKKWWKRAERPED---------KK-NPWAQVPNSVDVEMTSYALLSYLDR-GLVED 1255 (1397)
Q Consensus 1189 la~~~~~--~~~~~~L~~~a~~~~~~~~W~~~~~~~~---------~~-~~~~~~~~s~~vE~t~Y~lL~~~~~-~~~~~ 1255 (1397)
|++++.. ..++++|++.|+.+++.+||........ .. ..++++++|++|||||||||+++.. ++.+.
T Consensus 523 l~~~~~~~~~~~~~~L~~~a~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~VEttayaLla~l~~~~~~~~ 602 (767)
T 4fxk_B 523 LTKAPVDLLGVAHNNLMAMAQETGDNLYWGSVTGSQSNAVSPTPAPRNPSDPMPQAPALWIETTAYALLHLLLHEGKAEM 602 (767)
T ss_dssp HHTCTTHHHHHHHHHHHTTCCBCSSCBCCCCCCCCCGGGGCCSSSCCCSSSCBCCCCHHHHHHHHHHHHHHHHHTSSCHH
T ss_pred HcCCcHHHHHHHHHHHHhhcEEcCCeeEEeccCCCcccccccccccccccccccccchHHHHHHHHHHHHHHhcCCchhH
Confidence 9998875 4589999999999999999976532211 11 2234578899999999999999864 68899
Q ss_pred chhhhhhhhhcccCCCCccccccCCCccccceeccccccccccCceeEEEeeccccchhheeeeccccccccccccCCCC
Q psy5522 1256 TLPILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTHKVAQQKPVPVSIYDYYDQSRRARMFYEPRVATLCDICEGEDC 1335 (1397)
Q Consensus 1256 a~~i~~Wl~~q~n~~Ggf~stQdT~~~~c~~~~~~~~~~v~~~~p~~v~~ydyy~~~~~~~~~y~~~~~~~c~~c~~~~c 1335 (1397)
|.+|++||++|||.+|||+|||||
T Consensus 603 a~~iv~WL~~Qr~~~Ggf~STQdT-------------------------------------------------------- 626 (767)
T 4fxk_B 603 ADQASAWLTRQGSFQGGFRSTQDT-------------------------------------------------------- 626 (767)
T ss_dssp HHHHHHHHHHTCCTTSSCSSHHHH--------------------------------------------------------
T ss_pred HHHHHHHHHHhhcCCCCCcCHHHH--------------------------------------------------------
Confidence 999999999999999999999999
Q ss_pred CCccchhHHHHHHHhhhhcc-CCCcEEEEEEeC--C-CceeeEEEeCCCceEEEeeccccccc
Q psy5522 1336 SKDTVIGLYALAQLAEKVLA-RNNDVSISFKYL--N-GQSSEMSVNRLNNMILQKNEVYEFHA 1394 (1397)
Q Consensus 1336 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~-~~~~~~~~~~~n~~~~q~~~~~~~~~ 1394 (1397)
++|||||++|++++++ .+.+++|+|++. + .....|++|+.|++++|+..+|..|+
T Consensus 627 ----v~AL~ALa~y~~~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~lq~~~~~~~~~ 685 (767)
T 4fxk_B 627 ----VIALDALSAYWIASHTTEERGLNVTLSSTGRNGFKSHALQLNNRQIRGLEEELQFSLGS 685 (767)
T ss_dssp ----HHHHHHHHHHHHHTCCCSCCCCEEEEEEEETTEEECCEEECSSCCCSSCCEEECSSSCE
T ss_pred ----HHHHHHHHHHHHhcccCCCCceEEEEEecCcCCcceeEEEecCcceeEEEEEeecCCCc
Confidence 9999999999999997 455667777654 2 24578999999999999999998876
No 8
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=100.00 E-value=1.3e-88 Score=897.49 Aligned_cols=487 Identities=31% Similarity=0.490 Sum_probs=422.2
Q ss_pred cccceecccCcceeEEEEEe---ccCc--eEEEEEEcCCccccEEEEEEEEeCCCceeeeeCCeeEEEeeeEEEEecCCc
Q psy5522 649 TQLTVRKHFPETWLFQMEET---GFDG--KVMVNEKVPDSITSWVLSAFSVDSLYGLGLMDMPKKLRVFRPFFISLDLPY 723 (1397)
Q Consensus 649 ~~~~vR~~FpETwiW~~~~~---~~~G--~a~v~~tvPDtiT~W~~~Afa~s~~~G~G~a~~~~~l~vfkpffv~l~LPy 723 (1397)
..+.+|++|||||+|.++.+ |++| +++++++|||+||+|+++|||++++.|||++ ++.+++|+|||||+++|||
T Consensus 11 ~~~~~R~~F~et~~w~~~~~t~~d~~G~~~~~~~~~lPDsiTtwrv~ava~s~~~g~G~a-~~~~~~v~kp~~v~~~LP~ 89 (915)
T 2hr0_B 11 ENIVSRSEFPESWLWNVEDLKEPPKNGISTKLMNIFLKDSITTWEILAVSMSDKKGICVA-DPFEVTVMQDFFIDLRLPY 89 (915)
T ss_dssp TTSCCCCCCSSCBCCCEEECCSCCBTTEEEEEEEEECCSCCEEEEEEEEEEETTTEEEEC-CCEEEEECCSSEEEEECCS
T ss_pred CCCcccCCCCCceeEeeeecCCccCCCceeeEEEEeCCCCccEEEEEEEEEcCCCCeeec-CCceEEEeccEEEEccCCC
Confidence 35679999999999999975 7899 8999999999999999999999998999999 6889999999999999999
Q ss_pred eeeeCCEEEEEEEEEcCCC-ccEEEEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeEEEEEEEeceee
Q psy5522 724 SVMRGEVVAIPVVVFNYLS-QDLVADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGSTTTFVITPKELG 802 (1397)
Q Consensus 724 sv~rGE~~~l~~~VfNyl~-~~~~v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~p~~lG 802 (1397)
||+|||++.|+++||||++ ++++|+|+|..++++++.... .....++++|++++++++.|+|+|.++|
T Consensus 90 ~v~~GD~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~-----------~~~~~~~v~l~~~~~~~v~f~i~~~~~G 158 (915)
T 2hr0_B 90 SVVRNEQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATT-----------KRRHQQTVTIPPKSSLSVPYVIVPLKTG 158 (915)
T ss_dssp EEETTCCEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCS-----------SSCEEEEEEECTTEEEEEEEEEEECSCE
T ss_pred EEecCcEEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCC-----------CCcceeEEEECCCCeEEEEEEEEECccc
Confidence 9999999999999999999 999999999999988753211 1134689999999999999999999999
Q ss_pred eEEEEEEEEeC--CCCceeEEEEEecCCCee-eEEEEEEEEecCCC---ceeEEEEEecCCCCcCCCCcE-EEEEEEccc
Q psy5522 803 YIGIKVTATSN--LAGDSMEGKLLVKPEGET-QYKNKAIFVDLRKN---KTFSVNVTLDMPKNIVPGSEH-VEVSAVGDL 875 (1397)
Q Consensus 803 ~v~itV~A~~~--~~~D~v~k~L~V~peG~~-~~~t~s~~l~~~~~---~~~~~~i~l~~P~~~v~gs~~-~~vsv~gd~ 875 (1397)
.++|+|+|.+. ..+|+++++|+|+|+|++ ++.+++.+||+++. +..+.++++.+|.+++|||.+ ++|++.|++
T Consensus 159 ~~~i~v~a~~~~~~~~D~v~~~l~V~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~vp~s~~~~~vs~~~~~ 238 (915)
T 2hr0_B 159 LQEVEVKAAVYHHFISDGVRKSLKVVPEGIRMNKTVAVRTLDPERLGREGVQKEDIPPADLSDQVPDTESETRILLQGTP 238 (915)
T ss_dssp EEEEEEEEEESSSCCEEEEEEEEEEECSCCC---CHHHHHHTTSCCSSCSSSSSSSCTTCCSSCCSSCCCCCC-CCSSSS
T ss_pred eEEEEEEEEecCCCCCceEEEEEEEccCCceeEEEEEEEEEeccccCCCcceeEEEeccCccccCCCCceeEEEEEEccc
Confidence 99999999984 379999999999999986 44777888998621 224567788999999999998 999999999
Q ss_pred ccCcccC------cchhhccCCCchhhhhcccchHHHHHHHHHHhccc---cHHHHHHHHHHHHhccccceeeecCCCCc
Q psy5522 876 LGPSIPN------LANLIKMPFGCGEQNMLNFVPNIVVLEYLKKTYQL---TDAIEAKASRYLETGYQQELTYRRPDGSF 946 (1397)
Q Consensus 876 l~~~~~~------l~~Ll~~P~GCgEQ~m~~~~p~i~~l~yL~~~~~l---~~~~~~~a~~~l~~gy~~~l~y~~~dGsf 946 (1397)
+++++++ |++|++|||||+||||++++|++|+++||+.++|+ +++.+++|+++|+.||+|++.||++||||
T Consensus 239 ~~~~l~~~~~~~~l~~L~~yPyGC~EQ~~s~~~P~l~~~~yL~~~~q~~~~~~~~~~~a~~~i~~g~~rll~~Q~~DGsf 318 (915)
T 2hr0_B 239 VAQMTEDAVDAERLKHLIVTPSGCGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQQLAFRQPSSAF 318 (915)
T ss_dssp SSHHHHHHHSSSSGGGGCSSCCCSTTGGGGGTHHHHHHHHHHHHTTCHHHHCTHHHHHHHHHHHHHHHHHGGGCCTTTCC
T ss_pred chhhhhcccchhhHHHHHhCCCCcHHHHHHhhhhHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Confidence 9999965 99999999999999999999999999999999986 47889999999999999999999999999
Q ss_pred cccCCCCCCCCcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHh-cccCCCccccchHhHHHhhcCCCC----ccEEEE
Q psy5522 947 SAFGTTDPNGSTWLTAFVAKSFRQAASHTTIDESVILEALAWLSS-NQAVNGSFPEVGKVSHADMQGGAA----KGLALT 1021 (1397)
Q Consensus 947 s~~~~~~~~~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~-~q~~~G~F~stqdvl~al~~~~~~----~~v~lt 1021 (1397)
++|++. .+++|+||||+++|.+|++++.||+..++++++||.+ +|.++|+|.+...+++..++++.. .++.++
T Consensus 319 s~w~~~--~~s~wlTAyv~~~l~~a~~~~~v~~~~i~~al~~L~~~~Q~~dG~f~~~~~~~~~~m~gg~~~~~~~~~~lt 396 (915)
T 2hr0_B 319 AAFVKR--APSTWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQKPDGVFQEDAPVIHQEMIGGLRNNNEKDMALT 396 (915)
T ss_dssp BSSSSS--CBCHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHBCTTSCBCCCSCCSSSCCCCSCCCCTTHHHHHH
T ss_pred cccCCC--CCcceehHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHhhccCCCccccCccccchhhcCCccCccccccccH
Confidence 999864 6899999999999999999999999999999999994 999999998877777666665542 345666
Q ss_pred EEEEeccccceeEEEEeeeeEEEEEEEEEEeeccCCCCCceeeccccccCCCCCceEEEEEEeecCCCCccEEEEEecCC
Q psy5522 1022 AYTLLPKKTRAVNMTATGSGFAVVYISYQYNINVTGAWPMFTLDPQVDKNSDSNHLQLSICSGFIGEGDSNMAVMEVSLP 1101 (1397)
Q Consensus 1022 ~~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~~~~~~f~l~v~~~~~~~~~~~~l~vc~~y~~~~~s~Mailev~l~ 1101 (1397)
+++++ ||.+.+-+
T Consensus 397 Ayvl~-------------------------------------------------------------------aL~~~g~~ 409 (915)
T 2hr0_B 397 AFVLI-------------------------------------------------------------------SLQEAKDI 409 (915)
T ss_dssp HHHHH-------------------------------------------------------------------HHHHHTTT
T ss_pred HHHHH-------------------------------------------------------------------HHHhcccc
Confidence 76554 55555110
Q ss_pred cccccCCCCchhhcccCceeEEEEeCCeEEEEEEeeecCCccceeeecccccccchhhHHHHHHHHHhhcCCCCchHHHH
Q psy5522 1102 SGFTVDSDALPSLQVSQNVKRVETKNGNTMVVLYFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYIVKNLAGTEDAYAIA 1181 (1397)
Q Consensus 1102 SGf~~~~~~l~~l~~~~~i~~~e~~~~~~~v~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~a 1181 (1397)
. ++. ++. .++++++|+.||+++++...++|++|
T Consensus 410 ~------------------------~~~---------~~~--------------~~~~i~~A~~yL~~~~~~~~~~y~~a 442 (915)
T 2hr0_B 410 C------------------------EEQ---------VNS--------------LPGSITKAGDFLEANYMNLQRSYTVA 442 (915)
T ss_dssp S------------------------TTT---------CTT--------------HHHHHHHHHHHHHHHGGGCCSHHHHH
T ss_pred c------------------------ccC---------ccc--------------chHHHHHHHHHHHHhhhccCCHHHHH
Confidence 0 001 122 56789999999999988888999999
Q ss_pred HHHHHHhhCCCCchHHHHHHHhhcccccCCcccccccCCCCCCCCCCCCCCCcccchhhHHHHHHhhccCCcccchhhhh
Q psy5522 1182 ICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWAQVPNSVDVEMTSYALLSYLDRGLVEDTLPILT 1261 (1397)
Q Consensus 1182 l~aYal~la~~~~~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~ 1261 (1397)
++||||+|+|+. +..++++|.+.+. +..||.... +++.+||+||||||+++..++...+.+|++
T Consensus 443 ~layAL~l~g~~-a~~~l~~L~~~~~---~~~~w~~~~------------~~~~~ve~TayaLlall~~~~~~~~~~~v~ 506 (915)
T 2hr0_B 443 IAGYALAQMGRL-KGPLLNKFLTTAK---DKNRWEDPG------------KQLYNVEATSYALLALLQLKDFDFVPPVVR 506 (915)
T ss_dssp HHHHHHHTTTCC-CHHHHHHHHHTSB---TTTBCCCSS------------CHHHHHHHHHHHHHHHHHTTCTTTHHHHHH
T ss_pred HHHHHHHHcCCh-HHHHHHHHHhhcc---CCCCCCCCC------------CCccchHHHHHHHHHHHhcCChhhHHHHHH
Confidence 999999999999 7778898888664 557896532 245799999999999999999999999999
Q ss_pred hhhhcccCCCCccccccC
Q psy5522 1262 WLVTQQNDQGGFASTQMS 1279 (1397)
Q Consensus 1262 Wl~~q~n~~Ggf~stQdT 1279 (1397)
||.+|||.+|||.|||||
T Consensus 507 wL~~qq~~~Ggw~STQdT 524 (915)
T 2hr0_B 507 WLNEQRYYGGGYGSTQAT 524 (915)
T ss_dssp HHHTCCCSSSSCCSHHHH
T ss_pred HHHhcccCCCCccchhhH
Confidence 999999999999999999
No 9
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=100.00 E-value=7.5e-81 Score=798.68 Aligned_cols=584 Identities=20% Similarity=0.289 Sum_probs=486.2
Q ss_pred CEEEEeeCeeecCCeEEEEEEeecCCccEEEEEEEEeecCCCCeeEEeEEEEEC--CCceeEEEEEcCCCC---C--c--
Q psy5522 1 YYTVVAPKVLRPNGEYHVAVSTQAVSEATQVSVEVGGKQDSGGEFRTKQLLSVD--PFSTRIVKLDIGDLG---P--G-- 71 (1397)
Q Consensus 1 ~y~v~~P~~lr~g~~~~v~v~l~~~~~~v~v~v~L~~~~~~~~~~~~~~~~~~~--~~~~~~~~f~vP~~~---~--~-- 71 (1397)
+|+|++|++||+|++|+|||++++.+++++|+++|++.+.. ......+.+.+. +++++|++|+||... . +
T Consensus 3 ~y~v~~P~~l~~g~~~~v~v~~~~~~~~~~v~v~l~~~~~~-~~~~~~~~v~l~~~~~~~~~~~~~vp~~~~~~~~~~~~ 81 (645)
T 2hr0_A 3 MYSIITPNILRLESEETMVLEAHDAQGDVPVTVTVHDFPGK-KLVLSSEKTVLTPATNHMGNVTFTIPANREFKSEKGRN 81 (645)
T ss_dssp BCCEEEESEEETTSCBCCEECCBSCSSCCEEECCEEETTSS-CCSBCCCEEECCGGGTCC---CBCCCCCC-CCSCCTTC
T ss_pred eEEEEECceEecCCCcEEEEEEECCCCCEEEEEEEEeCCCC-cEEEEEeeEEEcCCCCeEEEEEEEeCcccccccccCCc
Confidence 59999999999999999999999999999999999873221 123334455554 366889999999642 1 3
Q ss_pred ee-EEEEEecCceeeEeeEEEEEEecccEEEEEcCCCcccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeee
Q psy5522 72 QY-NLTVKGSGSLNFYNSTGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWT 150 (1397)
Q Consensus 72 ~~-~l~v~g~~~~~f~~~~~v~~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~ 150 (1397)
.| +|.++| +++.| ++.|+++.++.++||||||||||||||||||++++|.+++|. +.+++|+|.||+|++|+|+.
T Consensus 82 ~~v~l~~~~-~~~~~--~~~v~~~~~~~~~fi~TDR~iYrPGqtV~~r~i~~d~~~~p~-~~~v~v~l~dP~g~~i~~~~ 157 (645)
T 2hr0_A 82 KFVTVQATF-GTQVV--EKVVLVSLQSGYLFIQTDKTIYTPGSTVLYRIFTVNHKLLPV-GRTVMVNIENPEGIPVKQDS 157 (645)
T ss_dssp CEEEEEEEE-TTEEE--EEEEEEECCCCEEEEEESCSBCCTTSEEEEEEEEECTTSCBC-CCEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEEEe-CCeEE--EEEEEEecCCccEEEEcCCccCCCCCEEEEEEEEECCCCccc-CceEEEEEECCCCCEEEEEE
Confidence 44 899999 45544 788999999999999999999999999999999999999996 57899999999999999964
Q ss_pred eecc-CCceeeeeeecCCCCCCeeEEEEEEEcC---eEEEEEEEEeeecCCcEEEEEeCCCceEeeC--CeEEEEEEEEE
Q psy5522 151 RALT-TRGVFSADLQLSKSPVLGDWNITINVLD---QKFTKRFTVAEYVLPKFEVNVNVPPHATFKD--SKVVISVNAKY 224 (1397)
Q Consensus 151 ~~~~-~~Gi~~~sf~L~~~~~lG~y~I~v~~~~---~~~~~~F~VeEYvLPkFeV~v~~p~~i~~~~--~~~~v~v~AkY 224 (1397)
...+ .+|+++++|+||+++++|.|+|++..++ ...+++|+|||||||+|||++++|+..+..+ +.+.++|||+|
T Consensus 158 ~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~~~~F~VeeYvlP~feV~i~~~~~~~~~~~~~~~~v~v~a~Y 237 (645)
T 2hr0_A 158 LSSQNQLGVLPLSWDIPELVNMGQWKIRAYYENSPQQVFSTEFEVKEYVLPSFEVIVEPTEKFYYIYNEKGLEVTITARF 237 (645)
T ss_dssp EECTTTTTEEEEEEECCSSCCCSEEEEEEEETTCTTSEEEEEEECCCSCCCCCEEEEEESSSSEETTCTTCEEEEEEEEC
T ss_pred eeccccCCeEEEEEECCCccccccEEEEEEECCCCCceEEEEEEEeeccCCeEEEEEEcCceeEecCCCcEEEEEEEEEE
Confidence 4443 8999999999999999999999999864 4689999999999999999999999888888 99999999999
Q ss_pred ecCccccceEEEEEEeccccCccccccccceeEEeecCceEEEEEechhhhcc-c------cccceEEEEEEEEEE-CCc
Q psy5522 225 TYGKPVKGEATITAYPTIFSGVIQPLFQTPVRKVVPIDGKTVIEFDVVKELQL-T------DEYERNIHFDVAVEE-ALT 296 (1397)
Q Consensus 225 tyGkPV~G~v~v~v~~~~~~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~-~------~~~~~~l~V~a~VtE-~gT 296 (1397)
+||+||+|++++++++.. +.....+|..+....+.||++.++|+... ... . +....++.|+|+|+| .|+
T Consensus 238 ~~G~Pv~G~a~v~~~~~~--~~~~~~~~~~~~~~~~~dg~g~~~l~~~~-~~~~~~~~~~~~~~~~~~~v~a~V~e~~g~ 314 (645)
T 2hr0_A 238 LYGKKVEGTAFVIFGIQD--GEQRISLPESLKRIPIEDGSGEVVLSRKV-LLDGVQNLRAEDLVGKSLYVSATVILHSGS 314 (645)
T ss_dssp TTSCBCCEEEEEEEEEEE--TTEEEECGGGCEEEEEBTTEEEEEECHHH-HHTSCSSCSGGGGTTCEEEEEEEEEESSSS
T ss_pred cCCCeeeeEEEEEEEEee--CCeeeecCchheeEEeeCCeEEEEEeHHH-hhhhhcccccccccCcEEEEEEEEEECCCC
Confidence 999999999888887652 11112244455556667777777776544 211 0 112458999999999 688
Q ss_pred ceEEeeEEEEEEEEeeeEEEEEecCCcccCCCeEEEEEEEEccCCCccCCCCceEEEEEeeeccccccceeeEeeCCCee
Q psy5522 297 GRRQNNTGSVVFHKHKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGM 376 (1397)
Q Consensus 297 G~~~~~~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~ 376 (1397)
|++++++..++|..+++.|.|.+.+.+|+||+|+.++|+++|+||+|+++. .|.+. ..| ..+.+++++|.
T Consensus 315 ~~~~~~~~~i~i~~~~~~i~~~~~~~~~~~g~~~~~~v~~~~~dG~p~~~~--~v~l~--~~~------~~~~~t~~~G~ 384 (645)
T 2hr0_A 315 DMVQAERSGIPIVTSPYQIHFTKTPKYFKPGMPFDLMVFVTNPDGSPAYRV--PVAVQ--GED------TVQSLTQGDGV 384 (645)
T ss_dssp CEEEEEEEEEEEESCSCEEECSSSCSBCCTTSEEEEEEEEECSSSSBCSCC--CEEES--SSC------CSCCCCCTTSE
T ss_pred eEEEeeeeeEEEEEeeEEEEEEeCccccCCCCcEEEEEEEEcCCCCccCCE--EEEEe--cCc------ceeeEECCCCc
Confidence 999999999999999999999888999999999999999999999999953 45442 112 23468999999
Q ss_pred EEEEEeCCCCCceeEEEEEEEecCcc-------eEEEEEEeecCC--CCCeEEEEecCCCCCCCCeEEEEEEe---c---
Q psy5522 377 IKLVYYPPANENVTTLGIEAEYLDIK-------EWFSTISASESP--SNSFIQAALLTQNPKVNKDVELEINS---T--- 441 (1397)
Q Consensus 377 ~~f~i~~~~~~~~~~l~l~a~~~~~~-------~~~~~v~~~~S~--s~s~L~i~~~~~~~~~G~~~~v~v~s---~--- 441 (1397)
+.|.|+++.+++. ++|++++++.. ...+.+.+|+++ +++||+|..+++.|+||++++|.|+. +
T Consensus 385 ~~~~i~~~~~~g~--y~l~v~~~~~~~~~~~~a~~~~~~~~~~~~~~s~~~l~i~~~~~~~~~Ge~~~v~v~~~~s~~~~ 462 (645)
T 2hr0_A 385 AKLSINTHPSQKP--LSITVRTKKQELSEAEQATRTMQALPYSTVGNSNNYLHLSVLRTELRPGETLNVNFLLRMDRAHE 462 (645)
T ss_dssp EEEEEECCSCSSC--EEEEEEECCTTSCTTTSCEEEEEEBCCCCTTSCCCEEEEEECCCCCCTTSEEEEEEEEECCTTST
T ss_pred EEEEEECCCCCeE--EEEEEEEcCCCCCcccccceEEEEEeccCCCcCCCeEEEecCCCCcCCCCEEEEEEEECCCcccc
Confidence 9999999876667 55566665532 345566666666 78999999999999999999999984 3
Q ss_pred CCcceEEEEEEeCCeEEEEEEEEecCCceeEEEEEeeCCCCCceeEEEEEEEec----CCeEEEEeEEEEEc-cccccee
Q psy5522 442 APLKYISYQVLGRGDVIMADTITVPGNKMSTVIRFLATYAMAPTAHVIVQYVRE----DGEVVADGLDLELE-GGLQNFV 516 (1397)
Q Consensus 442 ~~~~~~~ylV~srG~Iv~~~~~~~~~~~~~~~~~l~vt~~maP~a~l~vy~v~~----~gevvads~~~~V~-~~f~nkV 516 (1397)
....+|+|+|++||+|+.++++.+..+++..+++|+++++|+|++++++|+++| +||+++|+++|+|+ .| .++|
T Consensus 463 ~~~~~~~y~v~~rg~Il~~~~~~~~~~~~~~~~~i~v~~~~~P~~~v~v~~v~p~~~~~ge~v~d~~~~~v~~~~-~~~l 541 (645)
T 2hr0_A 463 AKIRYYTYLIMNKGRLLKAGRQVREPGQDLVVLPLSITTDFIPSFRLVAYYTLIGASGQREVVADSVWVDVKDSC-VGSL 541 (645)
T ss_dssp TTCCEEEEEEEETTEEEEEEEEECCTTCSEEEEEEECCTTSCSEEEEEEEEEEECSSSSEEEEEEEEEEECCCCC-SSCC
T ss_pred CceEEEEEEEEeCCcEEEccEEEecCCCcEEEEEEECCcccCccEEEEEEEEeccCCCCCcEEEEEEEEEEcccc-cceE
Confidence 234468999999999999999998633477899999999999999999999995 89999999999996 56 6899
Q ss_pred eEEec---CCCCCCCceEEEEEEecCCcEEEEEEEeeecccccCCCCCChhHHhHhccccCCCCCCCCccccccccccCC
Q psy5522 517 SANVS---PDETEPGSNIQINLEAKPNSYIGLLAVDQKVLLLKTGNDIGKEDVMRELRSYDETDTSKLPLVENLRERYPG 593 (1397)
Q Consensus 517 ~l~~s---~~~~~Pg~~v~l~V~a~p~S~v~L~aVD~sVllL~~~~~lt~~~v~~~l~~y~~~~~~~~~~~~~~~~~~p~ 593 (1397)
+|+|+ +++++||++++|+|+++|+|+|+|+|||+|||+|+++++||+++||+.|+.|+.+|. +.+
T Consensus 542 ~v~~~~~~~~~~~Pg~~v~l~v~~~~~s~v~l~aVD~svl~L~~~~~lt~~~v~~~l~~~d~~c~------------~~~ 609 (645)
T 2hr0_A 542 VVKSGQSEDRQPVPGQQMTLKIEGDHGARVVLVAVDKGVFVLNKKNKLTQSKIWDVVEKADIGCT------------PGS 609 (645)
T ss_dssp EEEECSCSCSCCCTTCEEEEEEEEETTCEEEEEEECHHHHTTCCSSCCCHHHHHHHHHTTCSCCS------------SBC
T ss_pred EEEeccCCccccCCCCcEEEEEEECCCCEEEEEEEeeeEEEecCcCccCHHHHHHHHHhcCcccC------------CCC
Confidence 99994 899999999999999999999999999999999999999999999999999998863 116
Q ss_pred CcchhhHhhhcCeEEEeccccccc
Q psy5522 594 SFTAQATFEKAGAIVMTNGYVHER 617 (1397)
Q Consensus 594 ~~d~~~~f~~~Gl~v~Tn~~~~~~ 617 (1397)
+.|++++|+++||.++||+.+..+
T Consensus 610 ~~d~~~vf~~~GL~~~tn~~~~~~ 633 (645)
T 2hr0_A 610 GKDYAGVFSDAGLTFTSSSGQQTA 633 (645)
T ss_dssp CSSSSHHHHTTTEEEECSSSCBCC
T ss_pred CccHHHHHhhCCeEEEecCCcCCc
Confidence 789999999999999999988544
No 10
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=100.00 E-value=1.4e-78 Score=782.63 Aligned_cols=588 Identities=19% Similarity=0.311 Sum_probs=476.2
Q ss_pred CEEEEeeCeeecCCeEEEEEEeecCCccEEEEEEE--EeecCCCCeeEEeEEEE---ECCCceeEEEEEcCCCC------
Q psy5522 1 YYTVVAPKVLRPNGEYHVAVSTQAVSEATQVSVEV--GGKQDSGGEFRTKQLLS---VDPFSTRIVKLDIGDLG------ 69 (1397)
Q Consensus 1 ~y~v~~P~~lr~g~~~~v~v~l~~~~~~v~v~v~L--~~~~~~~~~~~~~~~~~---~~~~~~~~~~f~vP~~~------ 69 (1397)
+|+|++|++||+|++|+|||+++++++++.|++.+ .+... ........+. ...+.++|+.|+||...
T Consensus 3 ~y~v~~P~~lr~g~~e~v~V~~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~~~~~~~ 80 (656)
T 4fxk_A 3 RLLLFSPSVVHLGVPLSVGVQLQDVPRGQVVKGSVFLRNPSR--NNVPCSPKVDFTLSSERDFALLSLQVPLKDAKSCGL 80 (656)
T ss_dssp EEEEEEESEECSEEEEEEEEEEESCCTTCCCEEEEEEEEGGG--TEEESSCCEEEECCSSCCEEEEEEEECSHHHHHHTC
T ss_pred eEEEEECCeEECCCCeEEEEEEecCCCCcEEEEEEEEEcCCC--ceEEeeeeEEEeeccCCcceEEEEEccCCcccccee
Confidence 59999999999999999999999998765555554 44311 1222222222 24556899999999421
Q ss_pred ----Cce-eEEEEEec------CceeeEeeEEEEEEecccEEEEEcCCCcccCCceeEEEEEEEcCCCccCCCcceEEEE
Q psy5522 70 ----PGQ-YNLTVKGS------GSLNFYNSTGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFI 138 (1397)
Q Consensus 70 ----~~~-~~l~v~g~------~~~~f~~~~~v~~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I 138 (1397)
.+. ..+.++.. .+..|.+++.|.++.+++++||||||||||||||||||++++|.+++|. +.++.++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~vFIqTDr~iYrPGqtV~~r~i~~d~~~~p~-~~~~~v~i 159 (656)
T 4fxk_A 81 HQLLRGPEVQLVAHSPWLKDSLSRTTNIQGINLLFSSRRGHLFLQTDQPIYNPGQRVRYRVFALDQKMRPS-TDTITVMV 159 (656)
T ss_dssp CSSSSCCEEEEEEECHHHHTTTCSCSSCEEEEEEECCCCSEEEEEESCSEECTTCEEEEEEEEECSSSSBC-CCCEEEEE
T ss_pred eeecCCCcEEEEEecccccccccccceeeeeEEEEeccCccEEEECCCCCcCCCCEEEEEEEEECCccCcC-cccceEEE
Confidence 122 45555542 2367899999999999999999999999999999999999999999996 77899999
Q ss_pred ECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC---eEEEEEEEEeeecCCcEEEEEeCCCceEe----
Q psy5522 139 TDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD---QKFTKRFTVAEYVLPKFEVNVNVPPHATF---- 211 (1397)
Q Consensus 139 ~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~---~~~~~~F~VeEYvLPkFeV~v~~p~~i~~---- 211 (1397)
.||+|++|+||. ..+..|+++++|+||+++++|.|+|++..++ ...+++|+|||||||+|||+|++|+....
T Consensus 160 ~dp~g~~v~~~~-~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~~~~~~~~s~~F~VeeyvlP~feV~i~~~~~~~~~~~~ 238 (656)
T 4fxk_A 160 ENSHGLRVRKKE-VYMPSSIFQDDFVIPDISEPGTWKISARFSDGLESNSSTQFEVKKYVLPNFEVKITPGKPYILTVPG 238 (656)
T ss_dssp ECTTCCEEEEEE-ECCTTSEEEEEEECCTTCCSEEEEEEEEESSCTTCCCCEEEEECCCCCCSEEEEEEESSSSCCEETT
T ss_pred ECCCCcEEeeeE-EecCCceEEEEecCCCCCCCcCEEEEEEEcCCCceeEEEEEEEEEEecCcEEEEEecCcceeeeccC
Confidence 999999999995 5677899999999999999999999999975 45688999999999999999999885432
Q ss_pred eCCeEEEEEEEEEecCccccceEEEEEEeccccCccccccccce-eEEeecCceEEEEEechhhhccc---------ccc
Q psy5522 212 KDSKVVISVNAKYTYGKPVKGEATITAYPTIFSGVIQPLFQTPV-RKVVPIDGKTVIEFDVVKELQLT---------DEY 281 (1397)
Q Consensus 212 ~~~~~~v~v~AkYtyGkPV~G~v~v~v~~~~~~g~~~~~~~~~~-~~~~d~~G~~~~~~~~~~~~~~~---------~~~ 281 (1397)
.++.+.++|||+|+||+||+|+++++++.....+.. .+.... ....+.+|++.+.++... +... ...
T Consensus 239 ~~~~~~v~v~a~Y~~G~PV~G~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~ 315 (656)
T 4fxk_A 239 HLDEMQLDIQARYIYGKPVQGVAYVRFGLLDEDGKK--TFFRGLESQTKLVNGQSHISLSKAE-FQDALEKLNMGITDLQ 315 (656)
T ss_dssp EECCCEEEEEEEETTCCCCCSEEEEEEEECCTTSCC--EEEEEEEEEEECSSSEEEEECCHHH-HHHHHHHTSCCSSTTT
T ss_pred CCCeEEEEEEEEEccCccEeeEEEEEEEEecCCCCc--cccccccccEEeecCEEEEEECHHH-hhhhhccccccccccc
Confidence 478999999999999999999999998876432221 112222 456778999999998765 3211 112
Q ss_pred ceEEEEEEEEEECCcc-eEEeeEEEEEEEEeeeEEEEEecCCcccCCCeEEEEEEEEccCCCccCCCCceEEEEEeeecc
Q psy5522 282 ERNIHFDVAVEEALTG-RRQNNTGSVVFHKHKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYD 360 (1397)
Q Consensus 282 ~~~l~V~a~VtE~gTG-~~~~~~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~ 360 (1397)
..++.|+|+|+|+++| ...+....+.+..+++.|.+.+.+.+|+||+||.+++.++|+||+|+++....|.+.....+.
T Consensus 316 ~~~l~v~a~V~e~~g~~~~~~~~~~i~~~~~~~~i~~~~~~~~~kpg~p~~~~v~v~~~dG~P~~~~~v~v~~~~~~~~~ 395 (656)
T 4fxk_A 316 GLRLYVAAAIIESPGGEMEEAELTSWYFVSSPFSLDLSKTKRHLVPGAPFLLQALVREMSGSPASGIPVKVSATVSSPGS 395 (656)
T ss_dssp TTCEECEEEEECCSSSCCCEEECCCEECCSSSSEEECCSSCSCCCTTSBCCEEEEEECSSSSCCCSCCEEEEEEEECGGG
T ss_pred CceEEEEEEEEECCCCeEEEEEEEEEEEecccEEEEEeccCCeEcCCCcEEEEEEEECCCCCCCCCceEEEEEEEeccce
Confidence 4589999999998654 445556789999999999999999999999999999999999999999764444443221111
Q ss_pred ccccceeeEeeCCCeeEEEEEeCCCCCceeEEEEEEEecCcc--eEEEEEEeecCCCCCeEEEE-ecCCCCCCCCeEEEE
Q psy5522 361 ESKYEANQYKLDRNGMIKLVYYPPANENVTTLGIEAEYLDIK--EWFSTISASESPSNSFIQAA-LLTQNPKVNKDVELE 437 (1397)
Q Consensus 361 ~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~a~~~~~~--~~~~~v~~~~S~s~s~L~i~-~~~~~~~~G~~~~v~ 437 (1397)
.........+++.+|.+.+.++++.+++. +++++++.+.. .+.+.+..|+|++++||+|. ++++.|+||++++|.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~v~~~~~~~~~~~~~~~~~~s~s~~~l~i~~~d~~~~~~Ge~~~v~ 473 (656)
T 4fxk_A 396 VPEVQDIQQNTDGSGQVSIPIIIPQTISE--LQLSVSAGSPHPAIARLTVAAPPSGGPGFLSIERPDSRPPRVGDTLNLN 473 (656)
T ss_dssp CEEEEEEEECCCTTSEEEECCBCCTTCSE--EEEEEEESSSSCEEEEEEEECCCSSCSCEEEEECSCCSCCCTTCEEEEE
T ss_pred EEeeeEEEEEecCCceEEEEEeCCCCCcE--EEEEEEeCCcccEEEEEEEEccCCCCCCeEEEEecccCCccCCCeEEEE
Confidence 11223345667899999999998877766 56666666544 35566778899999999997 478899999999999
Q ss_pred EEecC---CcceEEEEEEeCCeEEEEEEEEecCCceeEEEEEeeCCCCCceeEEEEEEEecCCeEEEEeEEEEEc-cccc
Q psy5522 438 INSTA---PLKYISYQVLGRGDVIMADTITVPGNKMSTVIRFLATYAMAPTAHVIVQYVREDGEVVADGLDLELE-GGLQ 513 (1397)
Q Consensus 438 v~s~~---~~~~~~ylV~srG~Iv~~~~~~~~~~~~~~~~~l~vt~~maP~a~l~vy~v~~~gevvads~~~~V~-~~f~ 513 (1397)
|+++. ...+|+|++++||+|+..+.... ++..+++|+++++|+|+++++||++++ |++++|+++++|+ .||+
T Consensus 474 v~~~~~~~~~~~~~y~v~s~g~I~~~~~~~~---~~~~~i~l~vt~~~~P~~~v~v~~v~~-~~~v~ds~~~~v~~~~~~ 549 (656)
T 4fxk_A 474 LRAVGSGATFSHYYYMILSRGQIVFMNREPK---RTLTSVSVFVDHHLAPSFYFVAFYYHG-DHPVANSLRVDVQAGACE 549 (656)
T ss_dssp EEEESSCCCCCCEEEEEEETTEEEEEEEECC---CSSCEEEEECCGGGCSCEEEEEEECST-TCCEEECCEECCCSCCCS
T ss_pred EEecCCCCceeEEEEEEecCCcEEEEEEEec---CCcEEEEEEcChhcCCcEEEEEEEEEC-CcEEeeeEEEEeecCccC
Confidence 99753 34568999999999999887542 356789999999999999999999996 6889999999998 5889
Q ss_pred ceeeEEec-CCCCCCCceEEEEEEecCCcEEEEEEEeeecccc--cCCCCCChhHHhHhccccCCCCCCCCccccccccc
Q psy5522 514 NFVSANVS-PDETEPGSNIQINLEAKPNSYIGLLAVDQKVLLL--KTGNDIGKEDVMRELRSYDETDTSKLPLVENLRER 590 (1397)
Q Consensus 514 nkV~l~~s-~~~~~Pg~~v~l~V~a~p~S~v~L~aVD~sVllL--~~~~~lt~~~v~~~l~~y~~~~~~~~~~~~~~~~~ 590 (1397)
|+|+|+++ +++++||++++|+|+|+|+|+|+|+|||+|||+| +++|+||+++||+.|+.||.+|.
T Consensus 550 ~~l~v~~~~~~~~~Pg~~v~l~v~a~p~s~V~L~aVD~~Vl~L~~k~~~~Lt~~~v~~~l~~~D~g~~------------ 617 (656)
T 4fxk_A 550 GKLELSVDGAKQYRNGESVKLHLETDSLALVALGALDTALYAAGSKSHKPLNMGKVFEAMNSYDLGCG------------ 617 (656)
T ss_dssp SCEEEEEECCCEETTEEEEEEEEEESSEEEEECEEEESSSTTTCTTCCCCCCHHHHHHHHTTCCCCCS------------
T ss_pred cEEEEEeCCccccCCCCEEEEEEEeCCCCEEEEEEEEhhHhhcccCCcCCCCHHHHHHHHHhhccccC------------
Confidence 99999998 6789999999999999999999999999999999 67799999999999999999863
Q ss_pred cC-CCcchhhHhhhcCeEEEecccc
Q psy5522 591 YP-GSFTAQATFEKAGAIVMTNGYV 614 (1397)
Q Consensus 591 ~p-~~~d~~~~f~~~Gl~v~Tn~~~ 614 (1397)
| +|.|++++|+++||.+.|++..
T Consensus 618 -~g~g~~~~~vF~~aGl~~~~~~~~ 641 (656)
T 4fxk_A 618 -PGGGDSALQVFQAAGLAFSDGDQW 641 (656)
T ss_dssp -SSCCSSSHHHHHTTTEEEECSSSC
T ss_pred -CCCCcChhHhHhhcCeEEEcCCCC
Confidence 3 5789999999999999887653
No 11
>1hzf_A Complement factor C4A; alpha-alpha 6 barrel, immune system; 2.30A {Homo sapiens} SCOP: a.102.4.4
Probab=100.00 E-value=1.6e-53 Score=506.95 Aligned_cols=319 Identities=32% Similarity=0.473 Sum_probs=234.2
Q ss_pred EEEEecCCCCcCCCCc-EEEEEEEc----ccccC----cccCcchhhccCCCchhhhhcccchHHHHHHHHHHhcc---c
Q psy5522 850 VNVTLDMPKNIVPGSE-HVEVSAVG----DLLGP----SIPNLANLIKMPFGCGEQNMLNFVPNIVVLEYLKKTYQ---L 917 (1397)
Q Consensus 850 ~~i~l~~P~~~v~gs~-~~~vsv~g----d~l~~----~~~~l~~Ll~~P~GCgEQ~m~~~~p~i~~l~yL~~~~~---l 917 (1397)
.+|++.+|+|+||||. ++.|+|.| |+||+ .+++|++|++|||||+||+|++++|++++++||+.+++ +
T Consensus 2 ~~~~~~~p~~~vp~s~~~~~v~v~~~~~~d~~g~~~~~~~~~l~~L~~~P~Gc~EQ~~s~~~P~~~v~~~l~~~~~w~~~ 81 (367)
T 1hzf_A 2 LEIPGNSDPNMIPDGDFNSYVRVTASDPLDTLGSEGALSPGGVASLLRLPRGCGEQTMIYLAPTLAASRYLDKTEQWSTL 81 (367)
T ss_dssp --------------------------------------CHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHTTCSTTS
T ss_pred eEeCCCCccccCCCCCceEEEEEecCCchhhhhhhhccCHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 3567889999999998 79999876 77775 25899999999999999999999999999999999988 7
Q ss_pred cHHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCCcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCC
Q psy5522 918 TDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNG 997 (1397)
Q Consensus 918 ~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G 997 (1397)
+++.++++.++|+.||++++.||++||||++|+.. .+++|+||||+++|.+|++++.+|...++++++||.++|+++|
T Consensus 82 ~~~~~~~~~~~i~~g~~~ll~~Q~~dGgf~~~~~~--~~~~~lTa~v~~~l~~a~~~~~v~~~~i~~a~~~L~~~Q~~dG 159 (367)
T 1hzf_A 82 PPETKDHAVDLIQKGYMRIQQFRKADGSYAAWLSR--DSSTWLTAFVLKVLSLAQEQVGGSPEKLQETSNWLLSQQQADG 159 (367)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTTBCTTSCBCSSTTS--CCCHHHHHHHHHHHHHHGGGTCCCHHHHHHHHHHHGGGBCTTS
T ss_pred ChhHHHHHHHHHHHHHHHHHhccCCCCCeeccCCC--CCcHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhccCC
Confidence 77788899999999999999999999999999764 5799999999999999999999999999999999999999999
Q ss_pred ccccchHhHHHhhcCCC---CccEEEEEEEEeccccceeEEEEeeeeEEEEEEEEEEeeccCCCCCceeeccccccCCCC
Q psy5522 998 SFPEVGKVSHADMQGGA---AKGLALTAYTLLPKKTRAVNMTATGSGFAVVYISYQYNINVTGAWPMFTLDPQVDKNSDS 1074 (1397)
Q Consensus 998 ~F~stqdvl~al~~~~~---~~~v~lt~~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~~~~~~f~l~v~~~~~~~~ 1074 (1397)
||.....+++..++++. +.++.+|+++++
T Consensus 160 ~~~~~~~~~~~~~~gg~~~~~~~~~lTA~vl~------------------------------------------------ 191 (367)
T 1hzf_A 160 SFQDPCPVLDRSMQGGLVGNDETVALTAFVTI------------------------------------------------ 191 (367)
T ss_dssp CBCCSSCCSCGGGGGGGSSTTHHHHHHHHHHH------------------------------------------------
T ss_pred CcccccccccccccCCCCCCcccccchHHHHH------------------------------------------------
Confidence 99987777665666543 345778887666
Q ss_pred CceEEEEEEeecCCCCccEEEEEecCCcccccCCCCchhhcccCceeEEEEeCCeEEEEEEeeecCCccceeeecccccc
Q psy5522 1075 NHLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKRVETKNGNTMVVLYFAYHQVLPWTLMHYLVSKY 1154 (1397)
Q Consensus 1075 ~~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~~~e~~~~~~~v~lY~~~~~~~~~~~~~~~~~~~ 1154 (1397)
||++.+-. .++... +.|. +.
T Consensus 192 -------------------aL~~~g~~---~~~~~~-~~~~------------------------~~------------- 211 (367)
T 1hzf_A 192 -------------------ALHHGLAV---FQDEGA-EPLK------------------------QR------------- 211 (367)
T ss_dssp -------------------HHHHHHTT---CCTTTT-HHHH------------------------HH-------------
T ss_pred -------------------HHHhhhcc---cccccc-chhh------------------------hh-------------
Confidence 66664110 000000 0000 01
Q ss_pred cchhhHHHHHHHHHhhc-CCCCchHHHHHHHHHHhhCCCCch--HHHHHHHhhcccccCCcccccccCCCC---------
Q psy5522 1155 PRMNTINKAVDYIVKNL-AGTEDAYAIAICSYALHLAQHPVK--DVAFNLLESKAHNEDGKKWWKRAERPE--------- 1222 (1397)
Q Consensus 1155 ~~~~~~~~a~~~l~~~~-~~~~~~y~~al~aYal~la~~~~~--~~~~~~L~~~a~~~~~~~~W~~~~~~~--------- 1222 (1397)
.+.+|++|+.||++++ .+..++|++||+||||+|+|++.. ..++++|+++|+.+++.+||++...+.
T Consensus 212 -~~~~i~ra~~yL~~~~~~~~~~~y~~Al~ayAL~l~~~~~~~~~~~~~~L~~~a~~~~~~~~W~~~~~s~~~~~~~~~~ 290 (367)
T 1hzf_A 212 -VEASISKASSFLGEKASAGLLGAHAAAITAYALTLTKAPADLRGVAHNNLMAMAQETGDNLYWGSVTGSQSNAVSPTPA 290 (367)
T ss_dssp -HHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCEECSSCEECC---------------
T ss_pred -hHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhhhcCCCCccCCCCCccccccccccc
Confidence 4568999999998874 668899999999999999999864 559999999999999999998753211
Q ss_pred CCC-CCCCCCCCcccchhhHHHHHHhhcc-CCcccchhhhhhhhhcccCCCCccccccC
Q psy5522 1223 DKK-NPWAQVPNSVDVEMTSYALLSYLDR-GLVEDTLPILTWLVTQQNDQGGFASTQMS 1279 (1397)
Q Consensus 1223 ~~~-~~~~~~~~s~~vE~t~Y~lL~~~~~-~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT 1279 (1397)
+.. ..+++++++.+||+||||||+++.. ++.+.+.+||+||.+|||++|||+|||||
T Consensus 291 ~~~~~~~~~~~~s~~vE~TAyaLLall~~~~~~~~~~~iv~WL~~qrn~~Ggw~sTqdT 349 (367)
T 1hzf_A 291 PRNPSDPMPQAPALWIETTAYALLHLLLHEGKAEMADQASAWLTRQGSFQGGFRSTQDT 349 (367)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHTTSTTCSCSHHHH
T ss_pred ccccccccCCCccchhHHHHHHHHHHHhccCchhhhHHHHHHHHhCcCCCCCcccHHHH
Confidence 111 2234466788999999999999964 78899999999999999999999999999
No 12
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=100.00 E-value=5.7e-48 Score=432.39 Aligned_cols=223 Identities=29% Similarity=0.445 Sum_probs=196.1
Q ss_pred cccceecccCcceeEEEEEe----ccCc--eEEEEEEcCCccccEEEEEEEEeCCCceeeeeCCeeEEEeeeEEEEecCC
Q psy5522 649 TQLTVRKHFPETWLFQMEET----GFDG--KVMVNEKVPDSITSWVLSAFSVDSLYGLGLMDMPKKLRVFRPFFISLDLP 722 (1397)
Q Consensus 649 ~~~~vR~~FpETwiW~~~~~----~~~G--~a~v~~tvPDtiT~W~~~Afa~s~~~G~G~a~~~~~l~vfkpffv~l~LP 722 (1397)
....+|++|||||||+++.+ |++| ++++++++||+||+|+++|||++++.|||++ +|.++++||||||+++||
T Consensus 11 ~~~~vR~~FpETwlw~~~~~~~~~~~~g~~~~~~~~~lPDsiTtW~~~a~a~s~~~G~g~~-~~~~i~v~kpffv~~~LP 89 (252)
T 3hrz_B 11 SDIISRSDFPKSWLWLTKDLTEEPNSQGISSKTMSFYLRDSITTWVVLAVSFTPTKGICVA-EPYEIRVMKVFFIDLQMP 89 (252)
T ss_dssp GGCCCBCCCCSEECCCEEECCSCCCTTSCEEEEEEEECCSCSSEEEEEEEEEETTTEEEEC-CCEEEEBCCSEEEEECCC
T ss_pred ccccccccCCCcEEEEEEEcccccCCCCceEEEEEEECCCCccEEEEEEEEEeCCCCeeec-cceeEEEECCEEEEcCCC
Confidence 35689999999999999986 3456 9999999999999999999999999999999 689999999999999999
Q ss_pred ceeeeCCEEEEEEEEEcCCCccEEEEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeEEEEEEEeceee
Q psy5522 723 YSVMRGEVVAIPVVVFNYLSQDLVADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGSTTTFVITPKELG 802 (1397)
Q Consensus 723 ysv~rGE~~~l~~~VfNyl~~~~~v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~p~~lG 802 (1397)
|||+|||++.|+++||||+++|++|+|+|..+++|++..... ...++++||||+++++++|+|+|+++|
T Consensus 90 ~sv~rGE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~-----------~~~~~~v~v~a~~~~~v~f~i~p~~~G 158 (252)
T 3hrz_B 90 YSVVKNEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKG-----------QRYRQQFPIKALSSRAVPFVIVPLEQG 158 (252)
T ss_dssp SCEETTCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSS-----------CCEEEEEEECTTEEEEEEEEEEECSSE
T ss_pred cEEeeCCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCC-----------CceEEEEEECCCCeEEEEEEEEeccCC
Confidence 999999999999999999999999999999999998754221 234678999999999999999999999
Q ss_pred eEEEEEEEEe--CCCCceeEEEEEecCCCeeeEEEEEEEEecCCC---ceeEEEEEecCCCCcCCCC-cEEEEEEEcccc
Q psy5522 803 YIGIKVTATS--NLAGDSMEGKLLVKPEGETQYKNKAIFVDLRKN---KTFSVNVTLDMPKNIVPGS-EHVEVSAVGDLL 876 (1397)
Q Consensus 803 ~v~itV~A~~--~~~~D~v~k~L~V~peG~~~~~t~s~~l~~~~~---~~~~~~i~l~~P~~~v~gs-~~~~vsv~gd~l 876 (1397)
.++|+|+|.+ ...+|+++|+|+|+|||++++++++.+||+++. ..+++.+.+.+|+|+|||| .++.|++.||+|
T Consensus 159 ~~~i~v~A~~~~~~~~D~v~k~L~V~peG~~~~~~~s~~l~~~~~~~~~~~~~~i~~~~P~~~VpgS~~~~~vsv~Gd~l 238 (252)
T 3hrz_B 159 LHDVEIKASVQEALWSDGVRKKLKVVPEGVQKSIVTIVKLDPRAKGVGGTQLEVIKARKLDDRVPDTEIETKIIIQGDPV 238 (252)
T ss_dssp EEEEEEEEEETTSSCEEEEEEEEEEECSSEEEEEEEEEEECHHHHCSSSEEEEEECCCCCCSBCTTCCEEEEEEEEECC-
T ss_pred cEEEEEEEEecCCCcCceEEEEEEECCCCeEeEEEEEEEEccccCCCCCcEEEEEeCCCccccCCCCCeeEEEEEEccch
Confidence 9999999964 568999999999999999999999999999741 3567788999999999999 999999999999
Q ss_pred cCcccCc
Q psy5522 877 GPSIPNL 883 (1397)
Q Consensus 877 ~~~~~~l 883 (1397)
|++++|+
T Consensus 239 g~~i~n~ 245 (252)
T 3hrz_B 239 AQIIENS 245 (252)
T ss_dssp -------
T ss_pred HHHHhhc
Confidence 9998874
No 13
>2wy7_A Complement C3D fragment; immune system, immune response, innate immunity, complement inflammatory response; 1.70A {Homo sapiens} PDB: 2wy8_A 3oed_A 3oxu_A 3rj3_A 1ghq_A* 1w2s_A
Probab=100.00 E-value=4.7e-50 Score=467.44 Aligned_cols=295 Identities=33% Similarity=0.505 Sum_probs=242.5
Q ss_pred cCcchhhccCCCchhhhhcccchHHHHHHHHHHhccc---cHHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCC
Q psy5522 881 PNLANLIKMPFGCGEQNMLNFVPNIVVLEYLKKTYQL---TDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGS 957 (1397)
Q Consensus 881 ~~l~~Ll~~P~GCgEQ~m~~~~p~i~~l~yL~~~~~l---~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s 957 (1397)
++|++|++|||||+||||++|+|++|+++||+.++|+ +++++++++++|+.||+|+++||++||||++|+.. .++
T Consensus 5 ~~l~~L~~~P~GC~EQ~~~~~~P~~~~~~yl~~~~~~~~~~~~~~~~~~~~i~~g~~~~l~~q~~dGgf~~f~~~--~~s 82 (310)
T 2wy7_A 5 ERLKHLIVTPSGAGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQQLAFRQPSSAFAAFVKR--APS 82 (310)
T ss_dssp CTTGGGCCCCCSSTTHHHHHHHHHHHHHHHHHHHTCHHHHCTTHHHHHHHHHHHHHHHHHTTBCTTSCBCSSTTS--CCC
T ss_pred HHHHHHHhCCCCcHHHHHHHHhHHHHHHHHHHHhhccccCChhHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCC--Ccc
Confidence 6899999999999999999999999999999999987 45889999999999999999999999999999863 689
Q ss_pred cchhHHHHHHHHHccCCCccCHHHHHHHHHHHHh-cccCCCccccchHhHHHhhcCCC----CccEEEEEEEEeccccce
Q psy5522 958 TWLTAFVAKSFRQAASHTTIDESVILEALAWLSS-NQAVNGSFPEVGKVSHADMQGGA----AKGLALTAYTLLPKKTRA 1032 (1397)
Q Consensus 958 ~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~-~q~~~G~F~stqdvl~al~~~~~----~~~v~lt~~v~lp~~~~~ 1032 (1397)
+|+||||+++|.+|++++.||+..++++++||.+ +|+++|||.....+++..+++++ +.++.+|+++.+
T Consensus 83 ~wlTa~v~~~l~~a~~~~~v~~~~i~~a~~~L~~~~Q~~dGsf~~~~~~~~~~~~g~~~~~~~~~~~~ta~vl~------ 156 (310)
T 2wy7_A 83 TWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQKPDGVFQEDAPVIHQEMIGGLRNNNEKDMALTAFVLI------ 156 (310)
T ss_dssp HHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHBCTTSCBCCSSCCSCGGGGGGGTTCSCHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcCCCCccccCCCccCHhhcCCcccccccccchHHHHHH------
Confidence 9999999999999999999999999999999995 99999999887666665555543 234566776655
Q ss_pred eEEEEeeeeEEEEEEEEEEeeccCCCCCceeeccccccCCCCCceEEEEEEeecCCCCccEEEEEecCCcccccCCCCch
Q psy5522 1033 VNMTATGSGFAVVYISYQYNINVTGAWPMFTLDPQVDKNSDSNHLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALP 1112 (1397)
Q Consensus 1033 ~~v~~~G~G~~~~q~~~~Yn~~~~~~~~~f~l~v~~~~~~~~~~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~ 1112 (1397)
|+++.+-+ +
T Consensus 157 -------------------------------------------------------------aL~~~~~~----~------ 165 (310)
T 2wy7_A 157 -------------------------------------------------------------SLQEAKDI----C------ 165 (310)
T ss_dssp -------------------------------------------------------------HHHHHHHH----H------
T ss_pred -------------------------------------------------------------HHHhcccc----c------
Confidence 55555100 0
Q ss_pred hhcccCceeEEEEeCCeEEEEEEeeecCCccceeeecccccccchhhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCCC
Q psy5522 1113 SLQVSQNVKRVETKNGNTMVVLYFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQH 1192 (1397)
Q Consensus 1113 ~l~~~~~i~~~e~~~~~~~v~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~~ 1192 (1397)
.+. ++. .+++|++|+.||+++.+...++|++||+||||+++|+
T Consensus 166 --------------~~~---------~~~--------------~~~~i~~A~~~L~~~~~~~~~~y~~a~~ayAL~l~g~ 208 (310)
T 2wy7_A 166 --------------EEQ---------VNS--------------LPGSITKAGDFLEANYMNLQRSYTVAIAGYALAQMGR 208 (310)
T ss_dssp --------------TTT---------CTT--------------HHHHHHHHHHHHHHHGGGCCCHHHHHHHHHHHHHTTC
T ss_pred --------------ccC---------Ccc--------------hHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHhcCC
Confidence 001 122 5678999999999988878899999999999999999
Q ss_pred CchHHHHHHHhhcccccCCcccccccCCCCCCCCCCCCCCCcccchhhHHHHHHhhccCCcccchhhhhhhhhcccCCCC
Q psy5522 1193 PVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWAQVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGG 1272 (1397)
Q Consensus 1193 ~~~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~~Gg 1272 (1397)
. ...++++|.+.+. +..||..+. +++.+||+||||||+++..++...+.+|++||.+|||++||
T Consensus 209 ~-~~~~l~~l~~~~~---~~~~w~~~~------------~~~~~ve~Ta~aLlal~~~~~~~~~~~~v~wL~~qq~~~Gg 272 (310)
T 2wy7_A 209 L-KGPLLNKFLTTAK---DKNRWEDPG------------KQLYNVEATSYALLALLQLKDFDFVPPVVRWLNEQRYYGGG 272 (310)
T ss_dssp C-CHHHHHHHHHHSB---TTTBCCCSS------------CHHHHHHHHHHHHHHHHHHTCTTTHHHHHHHHHHTTCCCCS
T ss_pred c-HHHHHHHHHHhcc---CCCCCCCCC------------CcccchHHHHHHHHHHHhcCChhhHHHHHHHHHHccCCCCC
Confidence 9 7778999988764 446887532 24579999999999999999999999999999999999999
Q ss_pred ccccccCCCccccceeccccccccccCceeEEEeeccccchhheeeeccccccccccccCCCCCCccchhHHHHHHHhhh
Q psy5522 1273 FASTQMSKKELCPTVSAFRTHKVAQQKPVPVSIYDYYDQSRRARMFYEPRVATLCDICEGEDCSKDTVIGLYALAQLAEK 1352 (1397)
Q Consensus 1273 f~stQdT~~~~c~~~~~~~~~~v~~~~p~~v~~ydyy~~~~~~~~~y~~~~~~~c~~c~~~~c~~~~~~~~~~~~~~~~~ 1352 (1397)
|.||||| ++||+||++|+.+
T Consensus 273 w~sTq~T------------------------------------------------------------~~aL~AL~~y~~~ 292 (310)
T 2wy7_A 273 YGSTQAT------------------------------------------------------------FMVFQALAQYQKD 292 (310)
T ss_dssp TTCHHHH------------------------------------------------------------HHHHHHHHHHHHH
T ss_pred eeccHHH------------------------------------------------------------HHHHHHHHHHHHH
Confidence 9999999 9999999999999
Q ss_pred hcc-CCCcEEEEEEeC
Q psy5522 1353 VLA-RNNDVSISFKYL 1367 (1397)
Q Consensus 1353 ~~~-~~~~~~~~~~~~ 1367 (1397)
++. .+.+++|+|...
T Consensus 293 ~~~~~~~~~~v~v~~~ 308 (310)
T 2wy7_A 293 APDHQELNLDVSLQLP 308 (310)
T ss_dssp CC--------------
T ss_pred cCCCCCCceEEEEecC
Confidence 988 578888888753
No 14
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=100.00 E-value=1.6e-41 Score=462.89 Aligned_cols=235 Identities=21% Similarity=0.389 Sum_probs=151.1
Q ss_pred CCCcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchHh---HHHhhcCCC--------CccEEEEE-
Q psy5522 955 NGSTWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGKV---SHADMQGGA--------AKGLALTA- 1022 (1397)
Q Consensus 955 ~~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqdv---l~al~~~~~--------~~~v~lt~- 1022 (1397)
..++|+|||||++++.++++ ..+.++++||.+||+++|||+||||. ||||+++.. +.++.++.
T Consensus 1208 ~~~VE~TaYaLLa~l~~~~~-----~~a~~iv~WL~~qr~~~Ggf~STQdTvvaLqALa~Y~~~~~~~~~~~~~V~v~~~ 1282 (1642)
T 3prx_B 1208 THNIEGTSYALLALLKMKKF-----DQTGPIVRWLTDQNFYGETYGQTQATVMAFQALAEYEIQMPTHKDLNLDITIELP 1282 (1642)
T ss_dssp --------------------------------------------------------------------CCCCEEEEEECT
T ss_pred hHHHHHHHHHHHHHhccCch-----hhHHHHHHHHHHhccCCCcccCcHHHHHHHHHHHHHHHhcCcCCCccEEEEEEeC
Confidence 45899999999999987653 67889999999999999999999983 999998421 11222221
Q ss_pred -------------------EEEeccccceeEEEEeeeeEEEEEEEEEEeeccC--C-CCCceeeccccccC-----CCCC
Q psy5522 1023 -------------------YTLLPKKTRAVNMTATGSGFAVVYISYQYNINVT--G-AWPMFTLDPQVDKN-----SDSN 1075 (1397)
Q Consensus 1023 -------------------~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~--~-~~~~f~l~v~~~~~-----~~~~ 1075 (1397)
...+ +.+++++|+|+|+|||++|+.++||+.++ + .|+.|+|+|++.+. ....
T Consensus 1283 ~~~~~~~~~v~~~N~~l~q~~~l-~~~~~~~v~a~G~G~~~~q~~~~Yn~~~~~~~~~~~~F~L~v~~~~~~~~~~~~~~ 1361 (1642)
T 3prx_B 1283 DREVPIRYRINYENALLARTVET-KLNQDITVTASGDGKATMTILTFYNAQLQEKANVCNKFHLNVSVENIHLNAMGAKG 1361 (1642)
T ss_dssp TCSSCEEEEESTTTSSCCEEEEE-SSCCCEEEEEEESSEEEEEEEEEEEECC-----CCCSEEEEEEEECCCC-----CC
T ss_pred CCCccEEEEECCcccceeEEEEc-cCCCeEEEEEEeeeEEEEEEEEEEeccCccccCCCCCEEEEEEecccccCCccccc
Confidence 1233 45789999999999999999999999543 2 48899999998653 2356
Q ss_pred ceEEEEEEeecCCCCccEEEEEecCCcccccCCCCchhhcc--cCceeEEEEe-----CCeEEEEEEeeecCCccceeee
Q psy5522 1076 HLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALPSLQV--SQNVKRVETK-----NGNTMVVLYFAYHQVLPWTLMH 1148 (1397)
Q Consensus 1076 ~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~~l~~--~~~i~~~e~~-----~~~~~v~lY~~~~~~~~~~~~~ 1148 (1397)
+++|+||++|++.+.||||||||+|||||.|+.+||++|.+ .++|+|||++ +++ |+||||++++
T Consensus 1362 ~~~l~vc~~y~~~~~s~Mai~dV~l~SGf~~~~~~l~~L~~~~~~~i~~~E~~~~~~~~~~--vilYld~v~~------- 1432 (1642)
T 3prx_B 1362 ALMLKICTRYLGEVDSTMTIIDISMLTGFLPDAEDLTRLSKGVDRYISRYEVDNNMAQKVA--VIIYLNKVSH------- 1432 (1642)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEECCTTEEEBHHHHHHHHCSSSEECCCCCEETTEESCSE--EEEEEEEECS-------
T ss_pred EEEEEEEEEecCCCCCccEEEEEecCccceechhhHHHHhhccccceeEEEeeccccCCCE--EEEEEccCCC-------
Confidence 89999999999988999999999999999999999999987 4789999998 455 6999999986
Q ss_pred cccccccchhhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCCCCchHHHHHHHhhcccccCCcccccccCCCCCCCCCC
Q psy5522 1149 YLVSKYPRMNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPW 1228 (1397)
Q Consensus 1149 ~~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~~~~~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~ 1228 (1397)
T Consensus 1433 -------------------------------------------------------------------------------- 1432 (1642)
T 3prx_B 1433 -------------------------------------------------------------------------------- 1432 (1642)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccchhhHHHHHHhhccCCcccchhhhhhhhhcccCCCCccccccCCCccccceeccccccccccCceeEEEeec
Q psy5522 1229 AQVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTHKVAQQKPVPVSIYDY 1308 (1397)
Q Consensus 1229 ~~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT~~~~c~~~~~~~~~~v~~~~p~~v~~ydy 1308 (1397)
.+++|++|.++|.++|+++|||+|+||||
T Consensus 1433 ---------------------------------------------------~~~~c~~f~~~q~~~V~~~qpa~v~vYDY 1461 (1642)
T 3prx_B 1433 ---------------------------------------------------SEDECLHFKILKHFEVGFIQPGSVKVYSY 1461 (1642)
T ss_dssp ---------------------------------------------------SSCEEEEEEEEESCCCSSCCCEEEEEEET
T ss_pred ---------------------------------------------------CCceEEEEEEEEEEEeccccceEEEEEec
Confidence 45789999999999999999999999999
Q ss_pred cccchhheeeeccc--cccccccccCCCC
Q psy5522 1309 YDQSRRARMFYEPR--VATLCDICEGEDC 1335 (1397)
Q Consensus 1309 y~~~~~~~~~y~~~--~~~~c~~c~~~~c 1335 (1397)
|+|+++|++||+++ ...+|++|++++|
T Consensus 1462 Y~p~~~~~~~Y~~~~~~~~l~~lC~~~~C 1490 (1642)
T 3prx_B 1462 YNLDEKCTKFYHPDKGTGLLNKICIGNVC 1490 (1642)
T ss_dssp TEEEEEEEEEEBTTBSSCCCCCEEETTEE
T ss_pred cCCCcceEEEEcCCcCcchHHhhcCCCee
Confidence 99999999999995 4679999999765
No 15
>1qqf_A Protein (complement C3DG); alpha-alpha barrel, immune system; 1.45A {Rattus norvegicus} SCOP: a.102.4.4 PDB: 1qsj_A 3d5r_A 2noj_A 2gox_A 3d5s_A 1c3d_A 2xqw_A
Probab=100.00 E-value=9.3e-46 Score=424.67 Aligned_cols=255 Identities=33% Similarity=0.557 Sum_probs=218.1
Q ss_pred chhhhhcccchHHHHHHHHHHhccc---cHHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCCcchhHHHHHHHH
Q psy5522 893 CGEQNMLNFVPNIVVLEYLKKTYQL---TDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFR 969 (1397)
Q Consensus 893 CgEQ~m~~~~p~i~~l~yL~~~~~l---~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl~~~~ 969 (1397)
|+||||++|+|++|+++||+.++|+ +++++++++++|+.||+|+++||++||||++|+.. ++++|+||||+++|.
T Consensus 1 C~EQ~~~~~~P~~~~~~yL~~~~~~~~~~~~~~~~~~~~i~~g~~~~l~~q~~dGgf~~f~~~--~~s~wlTa~v~~~l~ 78 (277)
T 1qqf_A 1 CGEQNMIGMTPTVIAVHYLDQTEQWEKFGLEKRQEALELIKKGYTQQLAFKQPISAYAAFNNR--PPSTWLTAYVSRVFS 78 (277)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHTCHHHHCGGGHHHHHHHHHHHHHHHHTTBCTTSCBCSSTTS--CCCHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHcCCcccCChhHHHHHHHHHHHHHHHHHHhcCCCCCccccCCC--CccHHHHHHHHHHHH
Confidence 9999999999999999999999997 46889999999999999999999999999999864 689999999999999
Q ss_pred HccCCCccCHHHHHHHHHHHHh-cccCCCccccchHhHHHhhcCCC----CccEEEEEEEEeccccceeEEEEeeeeEEE
Q psy5522 970 QAASHTTIDESVILEALAWLSS-NQAVNGSFPEVGKVSHADMQGGA----AKGLALTAYTLLPKKTRAVNMTATGSGFAV 1044 (1397)
Q Consensus 970 ~a~~~i~vd~~~~~~~~~WL~~-~q~~~G~F~stqdvl~al~~~~~----~~~v~lt~~v~lp~~~~~~~v~~~G~G~~~ 1044 (1397)
+|++++.||+..++++++||.+ +|+++|||.....+++..+++++ +.++.+|+++++
T Consensus 79 ~a~~~~~v~~~~i~~a~~~L~~~~Q~~dG~f~~~~~~~~~~~~g~~~~~~~~~~~lta~vl~------------------ 140 (277)
T 1qqf_A 79 LAANLIAIDSQVLCGAVKWLILEKQKPDGVFQEDGPVIHQEMIGGFRNTKEADVSLTAFVLI------------------ 140 (277)
T ss_dssp HHTTTSCCCHHHHHHHHHHHHHHHBCTTSCBCCSSCCSCGGGGGGGGSCTTHHHHHHHHHHH------------------
T ss_pred HHhhcCCCCHHHHHHHHHHHHHhccCCCCCccCCccccchhhcCCCCCCccCccchHHHHHH------------------
Confidence 9999999999999999999995 99999999987777666666554 234666776655
Q ss_pred EEEEEEEeeccCCCCCceeeccccccCCCCCceEEEEEEeecCCCCccEEEEEecCCcccccCCCCchhhcccCceeEEE
Q psy5522 1045 VYISYQYNINVTGAWPMFTLDPQVDKNSDSNHLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKRVE 1124 (1397)
Q Consensus 1045 ~q~~~~Yn~~~~~~~~~f~l~v~~~~~~~~~~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~~~e 1124 (1397)
+|++.+-+ +
T Consensus 141 -------------------------------------------------aL~~~~~~----~------------------ 149 (277)
T 1qqf_A 141 -------------------------------------------------ALQEARDI----C------------------ 149 (277)
T ss_dssp -------------------------------------------------HHHHHHHH----H------------------
T ss_pred -------------------------------------------------HHHhhhhc----c------------------
Confidence 55555100 0
Q ss_pred EeCCeEEEEEEeeecCCccceeeecccccccchhhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCCCCchHHHHHHHhh
Q psy5522 1125 TKNGNTMVVLYFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQHPVKDVAFNLLES 1204 (1397)
Q Consensus 1125 ~~~~~~~v~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~~~~~~~~~~~L~~ 1204 (1397)
.+. ++. .+++|++|+.||+++.+...++|++||+||||+|+|++ ...++++|++
T Consensus 150 --~~~---------~~~--------------~~~~i~~A~~~L~~~~~~~~~~y~~a~~ayAl~l~g~~-~~~~l~~l~~ 203 (277)
T 1qqf_A 150 --EGQ---------VNS--------------LPGSINKAGEYLEASYLNLQRPYTVAIAGYALALMNKL-EEPYLTKFLN 203 (277)
T ss_dssp --TTT---------CTT--------------HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTCC-CTTHHHHHHH
T ss_pred --ccC---------CCc--------------hHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHcCCh-HHHHHHHHHH
Confidence 001 122 56789999999999988888999999999999999999 7779999988
Q ss_pred cccccCCcccccccCCCCCCCCCCCCCCCcccchhhHHHHHHhhccCCcccchhhhhhhhhcccCCCCccccccC
Q psy5522 1205 KAHNEDGKKWWKRAERPEDKKNPWAQVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMS 1279 (1397)
Q Consensus 1205 ~a~~~~~~~~W~~~~~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT 1279 (1397)
.+. +..||..+. +++.+||+||||||+++..++.+.+.+|++||.+|||++|||.|||||
T Consensus 204 ~~~---~~~~w~~~~------------~~~~~ve~Ta~aLlal~~~~~~~~~~~~v~wL~~qq~~~Ggw~sTq~T 263 (277)
T 1qqf_A 204 TAK---DRNRWEEPG------------QQLYNVEATSYALLALLLLKDFDSVPPVVRWLNDERYYGGGYGSTQAT 263 (277)
T ss_dssp HSB---TTTBCCCTT------------CHHHHHHHHHHHHHHHHHTTCTTSHHHHHHHHHHCCCCTTSTTCHHHH
T ss_pred hcc---CCCCCCCCC------------CccchhHHHHHHHHHHHhcCChhhHHHHHHHHHHccCCCCCeecchHH
Confidence 775 456887642 245799999999999999999999999999999999999999999999
No 16
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=419.71 Aligned_cols=227 Identities=23% Similarity=0.344 Sum_probs=80.9
Q ss_pred CCCcchhHHHHHHHHHccCC-CccCHHHHHHHHHHHHhcccCCCccccchHh---HHHhhcC-------CCCccEE-EEE
Q psy5522 955 NGSTWLTAFVAKSFRQAASH-TTIDESVILEALAWLSSNQAVNGSFPEVGKV---SHADMQG-------GAAKGLA-LTA 1022 (1397)
Q Consensus 955 ~~s~wlTAyvl~~~~~a~~~-i~vd~~~~~~~~~WL~~~q~~~G~F~stqdv---l~al~~~-------~~~~~v~-lt~ 1022 (1397)
..++++|||||++++.+++. -.-|...+.++++||.+||+.+|||.||||. |+||++. ..+.++. +..
T Consensus 1180 s~~vE~TayaLLall~~~~~~~~~d~~~a~~iv~WL~~qr~~~Ggf~STQdTv~aL~ALa~Y~~~~~~~~~~~~v~~v~~ 1259 (1451)
T 4acq_A 1180 SAEVEMTSYVLLAYLTAQPAPTSEDLTSATNIVKWITKQQNAQGGFSSTQDTVVALHALSKYGAATFTRTGKAAQVTIQS 1259 (1451)
T ss_dssp GGGGTHHHHHHHHHHCCSSCCCHHHHHHHHTTHHHHTTCCCTTSCCSSHHHHHHHHHHHHHHHHHHCCSSCCCCEEEEEE
T ss_pred hHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHHHcCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceEEEEEEc
Confidence 34689999999999987531 0114467889999999999999999999983 8999882 1233444 432
Q ss_pred -------------------EEEeccccceeEEEEeeeeEEEEEEEEEEeeccCCCCCceeecccccc-CCC----CCceE
Q psy5522 1023 -------------------YTLLPKKTRAVNMTATGSGFAVVYISYQYNINVTGAWPMFTLDPQVDK-NSD----SNHLQ 1078 (1397)
Q Consensus 1023 -------------------~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~~~~~~f~l~v~~~~-~~~----~~~~~ 1078 (1397)
.+.+|+.+++++|+++|+||+++|+.++||++.++..+.|+|+|++.+ .|. ..+++
T Consensus 1260 ~~~~~~~~~v~~~n~~~~q~~~l~~~~~~~~v~~~G~G~~~lq~~~~Yn~~~~~~~~~f~l~v~~~~~~~~~~~~~~~~~ 1339 (1451)
T 4acq_A 1260 SGTFSSKFQVDNNNRLLLQQVSLPELPGEYSMKVTGEGCVYLQTSLKYNILPEKEEFPFALGVQTLPQTCDEPKAHTSFQ 1339 (1451)
T ss_dssp SSSCCEEECCCTTTTTBCEEEECCCSSSCEEEEEEESSCEEEEEEEEEEECCC---------------------------
T ss_pred CCCCcEEEEECCCccceEEEEEccCCCceEEEEEEEEEEEEEEEEEEEeccCCCCCCceEEEEEEecCCCCccccccEEE
Confidence 245677889999999999999999999999988887889999998853 232 34789
Q ss_pred EEEEEeecCCC-CccEEEEEecCCcccccCCCCchhhcccCceeEEEEeCCeEEEEEEeeecCCccceeeecccccccch
Q psy5522 1079 LSICSGFIGEG-DSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKRVETKNGNTMVVLYFAYHQVLPWTLMHYLVSKYPRM 1157 (1397)
Q Consensus 1079 l~vc~~y~~~~-~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~~~e~~~~~~~v~lY~~~~~~~~~~~~~~~~~~~~~~ 1157 (1397)
|+||++|++.+ .||||||||+|||||+|+.++|++|...++|+|||+++++| +||||++++
T Consensus 1340 l~vc~~~~~~~~~s~Mai~dv~l~SGf~~~~~~l~~l~~~~~i~~~e~~~~~v--~~Y~d~~~~---------------- 1401 (1451)
T 4acq_A 1340 ISLSVSYTGSRSASNMAIVDVKMVSGFIPLKPTVKMLERSNHVSRTEVSSNHV--LIYLDKVSN---------------- 1401 (1451)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEecCCCCCCCcEEEEEecccccccchhhHHHhhccCceeEEEEcCCEE--EEEEecCCC----------------
Confidence 99999999865 59999999999999999999999998889999999999875 999998874
Q ss_pred hhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCCCCchHHHHHHHhhcccccCCcccccccCCCCCCCCCCCCCCCcccc
Q psy5522 1158 NTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWAQVPNSVDV 1237 (1397)
Q Consensus 1158 ~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~~~~~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~~~~~s~~v 1237 (1397)
T Consensus 1402 -------------------------------------------------------------------------------- 1401 (1451)
T 4acq_A 1402 -------------------------------------------------------------------------------- 1401 (1451)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHhhccCCcccchhhhhhhhhcccCCCCccccccCCCccccceeccccccccccCceeEEEeeccccchhhee
Q psy5522 1238 EMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTHKVAQQKPVPVSIYDYYDQSRRARM 1317 (1397)
Q Consensus 1238 E~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT~~~~c~~~~~~~~~~v~~~~p~~v~~ydyy~~~~~~~~ 1317 (1397)
+ +.|++|.++|.++|+++|||+|+|||||+|+++|++
T Consensus 1402 ------------------------------------------~-~~c~~f~~~~~~~V~~~~pa~v~vYdYY~p~~~~~~ 1438 (1451)
T 4acq_A 1402 ------------------------------------------Q-TLSLFFTVLQDVPVRDLKPAIVKVYDYYETDEFAIA 1438 (1451)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------C-eEEEEEEEEEEEEecccceeEEEEEeccCCCceEEE
Confidence 2 679999999999999999999999999999999999
Q ss_pred eeccc
Q psy5522 1318 FYEPR 1322 (1397)
Q Consensus 1318 ~y~~~ 1322 (1397)
||+++
T Consensus 1439 ~Y~~~ 1443 (1451)
T 4acq_A 1439 EYNAP 1443 (1451)
T ss_dssp -----
T ss_pred EECCC
Confidence 99975
No 17
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=100.00 E-value=8e-34 Score=395.85 Aligned_cols=239 Identities=17% Similarity=0.384 Sum_probs=196.6
Q ss_pred CcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchHh---HHHhhcCC------C--CccEEEE----
Q psy5522 957 STWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGKV---SHADMQGG------A--AKGLALT---- 1021 (1397)
Q Consensus 957 s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqdv---l~al~~~~------~--~~~v~lt---- 1021 (1397)
++++|||+|++++.+++. ..+.++++||.+||+.+|+|.||||. ++||++.. . +..+++.
T Consensus 1228 ~vE~tayaLlall~~~~~-----~~~~~iv~wL~~qr~~~gg~~STqdT~~Al~AL~~y~~~~~~~~~~~~~v~v~~~~~ 1302 (1661)
T 2b39_A 1228 NVEATSYALLALLARKDY-----DTTPPVVRWLNEQRYYGGGYGSTQATFMVFQALAQYQKDVPDHKELNLDVSIQLPSR 1302 (1661)
T ss_dssp HHHHHHHHHHHHHHHTCT-----TTSHHHHHHHHHCCTBTTBBCSHHHHHHHHHHHHHHHHHSCCGGGCEECCEEBCSSS
T ss_pred hHHHHHHHHHHHHhcCCh-----hhHHHHHHHHHhcccCCCCcccchHHHHHHHHHHHHHHHcCcCCCCcEEEEEEeCCC
Confidence 578999999999988753 45778899999999999999999972 78887631 1 1111111
Q ss_pred ----------------EEEEeccccceeEEEEeeeeEEEEEEEEEEeeccCC--CCCceeeccccccC--------CCCC
Q psy5522 1022 ----------------AYTLLPKKTRAVNMTATGSGFAVVYISYQYNINVTG--AWPMFTLDPQVDKN--------SDSN 1075 (1397)
Q Consensus 1022 ----------------~~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~~--~~~~f~l~v~~~~~--------~~~~ 1075 (1397)
..+.+| .+++++|+++|+||+++|+.++||++..+ .|+.|+|+|++.+. ....
T Consensus 1303 ~~~~~~~v~~~n~~~~~~~~~~-~~~~~~v~~~G~G~~~~~v~~~Y~~~~~~~~~~~~f~l~v~~~~~~~~~~~~~~~~~ 1381 (1661)
T 2b39_A 1303 NSAVRHRILWESASLLRSEETK-ENERFTVKAEGKGQGTLSVVTVYHAKLKGKVSCKKFDLRVSIRPAPETVKKPQDAKG 1381 (1661)
T ss_dssp SSCEECCEESSSSCSEEEECCS-CCCCEEEEECSSCCEEEEEEEEEEECCCTTSSCBSEEEEEEEEECCTTSCCCTTCSC
T ss_pred ccceEEEECCcCcceEEEEEec-CCCeEEEEEEeeEEEEEEEEEEEeccCCcccCCCceEEEEEecccccccccccCCCc
Confidence 012333 46899999999999999999999998763 37899999987532 2355
Q ss_pred ceEEEEEEeecCCCCccEEEEEecCCcccccCCCCchhhccc--CceeEEEE----eCCeEEEEEEeeecCCccceeeec
Q psy5522 1076 HLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALPSLQVS--QNVKRVET----KNGNTMVVLYFAYHQVLPWTLMHY 1149 (1397)
Q Consensus 1076 ~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~~l~~~--~~i~~~e~----~~~~~~v~lY~~~~~~~~~~~~~~ 1149 (1397)
.+.++||++|++.+.+||+|+||+|||||+|+.++|+.|... .+++++|+ ++++ |++|||+++.
T Consensus 1382 ~~~~~v~~~~~~~~~~~m~ivdv~lpsGfe~~~~~l~~l~~~~~~~~~~~E~~~~~~d~~--v~~y~d~l~~-------- 1451 (1661)
T 2b39_A 1382 SMILDICTKYLGDQDATMSILDISMMTGFSPDVEDLKTLSTGVDRYISKYEMNRDSNKNT--LIIYLDKVSH-------- 1451 (1661)
T ss_dssp EEEEEEEEEECSSSCBCSEEEEEECCTTEEECHHHHHHHHHSSBCSCSEEEEESSSSSCE--EEEEESCBCS--------
T ss_pred EEEEEEEEEecCCCCCceEEEEEecCcCCccCHhHHHHHhhccccceEEEEeeecCCCCE--EEEEeccCCC--------
Confidence 789999999998888999999999999999999999999774 78999999 6665 5999999885
Q ss_pred ccccccchhhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCCCCchHHHHHHHhhcccccCCcccccccCCCCCCCCCCC
Q psy5522 1150 LVSKYPRMNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWA 1229 (1397)
Q Consensus 1150 ~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~~~~~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~ 1229 (1397)
T Consensus 1452 -------------------------------------------------------------------------------- 1451 (1661)
T 2b39_A 1452 -------------------------------------------------------------------------------- 1451 (1661)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccchhhHHHHHHhhccCCcccchhhhhhhhhcccCCCCccccccCCCccccceeccccccccccCceeEEEeecc
Q psy5522 1230 QVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTHKVAQQKPVPVSIYDYY 1309 (1397)
Q Consensus 1230 ~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT~~~~c~~~~~~~~~~v~~~~p~~v~~ydyy 1309 (1397)
++..|+.+.+.|.++|++.||++|+|||||
T Consensus 1452 --------------------------------------------------~~~~~~~~~~~~~~~v~~~~Pa~v~vydyY 1481 (1661)
T 2b39_A 1452 --------------------------------------------------TVEDCLSFKVHQYFNVGLIQPGAVKVYSYY 1481 (1661)
T ss_dssp --------------------------------------------------SSCEEEEEEEEECSEEESCCCEEEEEEETT
T ss_pred --------------------------------------------------CCceEEEEEEEEEeEccccCceEEEEEecc
Confidence 346799999999999999999999999999
Q ss_pred ccchhheeeeccc--cccccccccCCCC---CCccch
Q psy5522 1310 DQSRRARMFYEPR--VATLCDICEGEDC---SKDTVI 1341 (1397)
Q Consensus 1310 ~~~~~~~~~y~~~--~~~~c~~c~~~~c---~~~~~~ 1341 (1397)
+|+++|+.||+++ ...+|+||++++| +..|..
T Consensus 1482 ~p~~~~~~~Y~~~~~~~~l~~~C~~~~C~c~e~~c~~ 1518 (1661)
T 2b39_A 1482 NLDETCIRFYHPDKEDGMLSKLCHKDTCRCAEENCFM 1518 (1661)
T ss_dssp CTTSEEEEEECCCSTTSTTSCCCCHHHHHHTTTTTC-
T ss_pred CCccceEEEEcCCccCchhhhcCCCCceeeccCCCcc
Confidence 9999999999996 5679999998877 345544
No 18
>3hrz_C Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_B* 3hs0_C*
Probab=100.00 E-value=3.7e-34 Score=336.74 Aligned_cols=171 Identities=27% Similarity=0.512 Sum_probs=150.5
Q ss_pred EEeccccceeEEEEeeeeEEEEEEEEEEeeccCC---CCCceeeccccccC-C----CCCceEEEEEEeecCCCCccEEE
Q psy5522 1024 TLLPKKTRAVNMTATGSGFAVVYISYQYNINVTG---AWPMFTLDPQVDKN-S----DSNHLQLSICSGFIGEGDSNMAV 1095 (1397)
Q Consensus 1024 v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~~---~~~~f~l~v~~~~~-~----~~~~~~l~vc~~y~~~~~s~Mai 1095 (1397)
+.+ +.+++++|+|+|+|||++|++++||++.++ .|++|+|+|++.+. + ...+++|+||++|+|.+.|||||
T Consensus 40 ~~l-~~~~~~~V~a~G~G~a~lQv~~~Ynv~~~~~~~~c~~F~L~V~~~~~~~~~~~~~~~~~l~vc~~y~g~~~SnMaI 118 (379)
T 3hrz_C 40 VET-KLNQDITVTASGDGKATMTILTFYNAQLQEKANVCNKFHLNVSVENIHLNAMGAKGALMLKICTRYLGEVDSTMTI 118 (379)
T ss_dssp EEE-SSCCCEEEEEEESCCEEEEEEEEEEECC-----CCCSEEEEEEEEECCCC----CCCEEEEEEEEECSSSCEEEEE
T ss_pred EEe-cCCCeEEEEEEeeeEEEEEEEEEEcccCccccccCCceEEEEEeeccccCccccccEEEEEEEEEeCCCCCCceEE
Confidence 345 578999999999999999999999996654 37899999998643 2 35689999999999988999999
Q ss_pred EEecCCcccccCCCCchhhcc--cCceeEEEEe-----CCeEEEEEEeeecCCccceeeecccccccchhhHHHHHHHHH
Q psy5522 1096 MEVSLPSGFTVDSDALPSLQV--SQNVKRVETK-----NGNTMVVLYFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYIV 1168 (1397)
Q Consensus 1096 lev~l~SGf~~~~~~l~~l~~--~~~i~~~e~~-----~~~~~v~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~ 1168 (1397)
|||+|||||.|+.++|++|.+ .++|+|||++ +++ |+||||++++
T Consensus 119 vdV~LlSGF~~~~~~L~~L~~~~~~~I~r~E~~~~~s~~~~--ViiYld~v~~--------------------------- 169 (379)
T 3hrz_C 119 IDISMLTGFLPDAEDLTRLSKGVDRYISRYEVDNNMAQKVA--VIIYLNKVSH--------------------------- 169 (379)
T ss_dssp EEEECCTTEEEBHHHHHHHHCSTTEEECCCCEETTEESCSE--EEEEEEEECS---------------------------
T ss_pred EEEecCcceeechhhHHHHhhccccceeEEEEeccccCCCE--EEEEEccCCC---------------------------
Confidence 999999999999999999977 4789999998 555 5999999986
Q ss_pred hhcCCCCchHHHHHHHHHHhhCCCCchHHHHHHHhhcccccCCcccccccCCCCCCCCCCCCCCCcccchhhHHHHHHhh
Q psy5522 1169 KNLAGTEDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWAQVPNSVDVEMTSYALLSYL 1248 (1397)
Q Consensus 1169 ~~~~~~~~~y~~al~aYal~la~~~~~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~ 1248 (1397)
T Consensus 170 -------------------------------------------------------------------------------- 169 (379)
T 3hrz_C 170 -------------------------------------------------------------------------------- 169 (379)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCcccchhhhhhhhhcccCCCCccccccCCCccccceeccccccccccCceeEEEeeccccchhheeeeccc--cccc
Q psy5522 1249 DRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTHKVAQQKPVPVSIYDYYDQSRRARMFYEPR--VATL 1326 (1397)
Q Consensus 1249 ~~~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT~~~~c~~~~~~~~~~v~~~~p~~v~~ydyy~~~~~~~~~y~~~--~~~~ 1326 (1397)
.++.|++|.++|.++|+++|||+|+|||||+|+++|++||+++ ...|
T Consensus 170 -------------------------------~~~~c~~f~~~q~~~V~~lqPA~V~VYDYYep~~~~~~fY~~~~~~~~l 218 (379)
T 3hrz_C 170 -------------------------------SEDECLHFKILKHFEVGFIQPGSVKVYSYYNLDEKCTKFYHPDKGTGLL 218 (379)
T ss_dssp -------------------------------SSCEEEEEEEEECSCCSSCCCEEEEEEETTBTTCCCEEEEBTTBTTCCC
T ss_pred -------------------------------CCcEEEEEEEEEEEEeccccceEEEEEeccCCCceEEEEEcCCcccchh
Confidence 4568999999999999999999999999999999999999995 4789
Q ss_pred cccccCCCC
Q psy5522 1327 CDICEGEDC 1335 (1397)
Q Consensus 1327 c~~c~~~~c 1335 (1397)
|+||+++.|
T Consensus 219 ~~lC~~~~C 227 (379)
T 3hrz_C 219 NKICIGNVC 227 (379)
T ss_dssp CEEEETTEE
T ss_pred hhhcCCCcc
Confidence 999999765
No 19
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=7.8e-24 Score=291.31 Aligned_cols=196 Identities=25% Similarity=0.429 Sum_probs=163.1
Q ss_pred CCcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchHh---HHHhhcCC-------CCccEEEEE---
Q psy5522 956 GSTWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGKV---SHADMQGG-------AAKGLALTA--- 1022 (1397)
Q Consensus 956 ~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqdv---l~al~~~~-------~~~~v~lt~--- 1022 (1397)
+.++.|||+|++|+.++. ...+.++++||.+||+.+|+|.|||+. |+||++.. .+..+++..
T Consensus 1047 s~ve~tA~aLlall~~~~-----~~~~~~~v~wL~~q~~~~g~w~sTq~T~~aL~AL~~y~~~~~~~~~~~~v~v~~~~~ 1121 (1325)
T 2pn5_A 1047 NPIETTAYALLSFVMAEK-----YTDGIPVMNWLVNQRYVTGSFPSTQDTFVGLKALTKMAEKISPSRNDYTVQLKYKKS 1121 (1325)
T ss_dssp SHHHHHHHHHHHHHHTTC-----HHHHHHHHHHHHTTCCTTSSCSSHHHHHHHHHHHHHHHHHHSCSCCEEEEEEEETTE
T ss_pred CchHHHHHHHHHHhhhcc-----chhhHHHHHHHHhccCCCCCccchHHHHHHHHHHHHHHHHcCCCCCcEEEEEEeCCc
Confidence 478999999999998764 457788999999999999999999982 77877621 111222210
Q ss_pred ---------------EEEeccccceeEEEEeeeeEEEEEEEEEEeeccCCCCCceeeccccccCCCCCceEEEEEEeecC
Q psy5522 1023 ---------------YTLLPKKTRAVNMTATGSGFAVVYISYQYNINVTGAWPMFTLDPQVDKNSDSNHLQLSICSGFIG 1087 (1397)
Q Consensus 1023 ---------------~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~~~~~~f~l~v~~~~~~~~~~~~l~vc~~y~~ 1087 (1397)
.+.+|..+++++|+++|+||+.+|+.++||++.++.++.|.|++++.+..+...+.|+||++|++
T Consensus 1122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~G~~~~~~~~~y~~~~~~~~~~f~l~v~~~~~~~~~~~~l~v~~~~~~ 1201 (1325)
T 2pn5_A 1122 AKYFKINSEQIDVENFVDIPEDTKKLEINVGGIGFGLLEVVYQFNLNLVNFENRFQLDLEKQNTGSDYELRLKVCASYIP 1201 (1325)
T ss_dssp EEEEEECCSSCCSCCCEECCCSCSEEEEEEEEEEEEEEEEEEECCCCCCCEEESEEEEEEEECCSSTTEEEEEEEEEECC
T ss_pred eEEEEEcccccceEEEEEcCCCCceEEEEEEEeEEEEEEEEEEEcccCCCCCCCceEEEEEecCCCCceEEEEEEEEecc
Confidence 03455667899999999999999999999998877788999999887666677899999999997
Q ss_pred ---CCCccEEEEEecCCcccccCCCCchhhcccCceeEEEEeCCeEEEEEEeeecCCccceeeecccccccc
Q psy5522 1088 ---EGDSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKRVETKNGNTMVVLYFAYHQVLPWTLMHYLVSKYPR 1156 (1397)
Q Consensus 1088 ---~~~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~~~e~~~~~~~v~lY~~~~~~~~~~~~~~~~~~~~~ 1156 (1397)
...+||+|+|++|||||+|+.++|+.|.....|+++|+++++-+|++|||.++.++.+|.|++...+|.
T Consensus 1202 ~~~~~~s~m~ivdv~lpsG~e~~~~~L~~~~~~~~i~~~E~r~~~~~v~~y~d~~~~~~~~~~~~~~r~~~v 1273 (1325)
T 2pn5_A 1202 QLTDRRSNMALIEVTLPSGYVVDRNPISEQTKVNPIQKTEIRYGGTSVVLYYDNMGSERNCFTLTAYRRFKV 1273 (1325)
T ss_dssp BTTBCSCSSEEEEEECCTTEEEEEEEEESCCSSSCCCEEEEETTTTEEEEEESCCCSSCEEEEEEEEECSCE
T ss_pred CCCCCCCceEEEEEecccCcccCHhHHHHhhccCccEEEEEECCCCEEEEEEecCCCCceEEEEEEEEEEEe
Confidence 457999999999999999999999999888999999998743346999999999998899998887774
No 20
>1edy_A Alpha 1-macroglobulin; beta sandwich, pseudo-symmetric dimer, protein binding; 2.30A {Rattus norvegicus} SCOP: b.2.4.1
Probab=99.95 E-value=4.4e-28 Score=241.86 Aligned_cols=122 Identities=27% Similarity=0.425 Sum_probs=109.7
Q ss_pred Cceeeccccc-cCC----CCCceEEEEEEeecCCC-CccEEEEEecCCcccccCCCCchhhcccCceeEEEEeCCeEEEE
Q psy5522 1060 PMFTLDPQVD-KNS----DSNHLQLSICSGFIGEG-DSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKRVETKNGNTMVV 1133 (1397)
Q Consensus 1060 ~~f~l~v~~~-~~~----~~~~~~l~vc~~y~~~~-~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~~~e~~~~~~~v~ 1133 (1397)
++|+|+|++. ..| ...+++|++|++|+|.+ .||||||||+|||||.|+.++|++|...++|+|+|++++++ +
T Consensus 2 ~~F~L~V~~~~~~~~~~~~~~~~~l~vc~~y~g~~~~SnMai~dV~l~SGf~~~~~~l~~L~~~~~i~r~E~~~~~V--i 79 (134)
T 1edy_A 2 APFTLKVNTLPLNFDKAEHHRKFQIHINVSYIGERPNSNMVIVDVKMVSGFIPVKPSVKKLQDQSNIQRTEVNTNHV--L 79 (134)
T ss_dssp CSEEEEEEEEESSTTTCSSCCEEEEEEEEEECSSSSSCSSEEEEEECCTTEEECHHHHHGGGGSTTEEEEEEETTEE--E
T ss_pred CccEEEEEEecccCCCcCcccEEEEEEEEEEcCCCCCCCEEEEEEecccCceEcHHHHHHhhcccceEEEEecCCEE--E
Confidence 5799999874 333 23579999999999865 69999999999999999999999999999999999999875 9
Q ss_pred EEeeecCCccceeeecccccccchhhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCCCCchHHHHHHHhhcccccCCcc
Q psy5522 1134 LYFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKK 1213 (1397)
Q Consensus 1134 lY~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~~~~~~~~~~~L~~~a~~~~~~~ 1213 (1397)
||||++++
T Consensus 80 lY~d~l~~------------------------------------------------------------------------ 87 (134)
T 1edy_A 80 IYIEKLTN------------------------------------------------------------------------ 87 (134)
T ss_dssp EEESCCCS------------------------------------------------------------------------
T ss_pred EEEecCCC------------------------------------------------------------------------
Confidence 99999985
Q ss_pred cccccCCCCCCCCCCCCCCCcccchhhHHHHHHhhccCCcccchhhhhhhhhcccCCCCccccccCCCccccceeccccc
Q psy5522 1214 WWKRAERPEDKKNPWAQVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTH 1293 (1397)
Q Consensus 1214 ~W~~~~~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT~~~~c~~~~~~~~~ 1293 (1397)
+ +.|++|.++|.+
T Consensus 88 ------------------------------------------------------------------~-~~c~~f~~~q~~ 100 (134)
T 1edy_A 88 ------------------------------------------------------------------Q-TMGFSFAVEQDI 100 (134)
T ss_dssp ------------------------------------------------------------------S-CEEEEEEEEESS
T ss_pred ------------------------------------------------------------------C-cEEEEEEEEEEE
Confidence 3 679999999999
Q ss_pred cccccCceeEEEeeccccchhheeeeccc
Q psy5522 1294 KVAQQKPVPVSIYDYYDQSRRARMFYEPR 1322 (1397)
Q Consensus 1294 ~v~~~~p~~v~~ydyy~~~~~~~~~y~~~ 1322 (1397)
+|+++|||+|+|||||+|+++|++||+++
T Consensus 101 ~V~~~qPa~V~VYDYY~p~~~~~~~Y~~~ 129 (134)
T 1edy_A 101 PVKNLKPAPVKVYDYYETDEFAIEEYSAP 129 (134)
T ss_dssp CCSCCCCEEEEEEESSCTTSEEEEEECCC
T ss_pred EeccccceEEEEEecCCCCceeEEEECCC
Confidence 99999999999999999999999999963
No 21
>1ayo_A Alpha-2-macroglobulin; receptor binding domain; HET: NAG; 1.90A {Bos taurus} SCOP: b.2.4.1 PDB: 1bv8_A
Probab=99.95 E-value=5.4e-28 Score=239.94 Aligned_cols=121 Identities=30% Similarity=0.450 Sum_probs=108.6
Q ss_pred Cceeeccccc-cCCC----CCceEEEEEEeecCCC-CccEEEEEecCCcccccCCCCchhhcccCceeEEEEeCCeEEEE
Q psy5522 1060 PMFTLDPQVD-KNSD----SNHLQLSICSGFIGEG-DSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKRVETKNGNTMVV 1133 (1397)
Q Consensus 1060 ~~f~l~v~~~-~~~~----~~~~~l~vc~~y~~~~-~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~~~e~~~~~~~v~ 1133 (1397)
++|+|+|++. ..|. ..+++|++|++|+|.+ .||||||||+|||||.|+.++|++|.+. +|+|+|++++++ +
T Consensus 2 ~~F~L~V~~~~~~~~~~~~~~~~~l~vc~~y~g~~~~SnMai~dV~l~SGf~~~~~~l~~L~~~-~i~r~E~~~~~V--i 78 (130)
T 1ayo_A 2 FPFALEVQTLPQTCDGPKAHTSFQISLSVSYIGSRPASNMAIVDVKMVSGFIPLKPTVKMLERS-NVSRTEVSNNHV--L 78 (130)
T ss_dssp CSEEEEEEEESSSCCSGGGGTEEEEEEEEEECSSSSSBSSEEEEEECCTTEEECHHHHHTTCSS-SEEEEEEETTEE--E
T ss_pred CccEEEEEEecCcCCCcCcccEEEEEEEEEEcCCCCCCCEEEEEEecccCceEcHHHHHHHhhc-ceEEEEecCCEE--E
Confidence 5799999875 3332 3579999999999865 6999999999999999999999999888 999999999875 9
Q ss_pred EEeeecCCccceeeecccccccchhhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCCCCchHHHHHHHhhcccccCCcc
Q psy5522 1134 LYFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKK 1213 (1397)
Q Consensus 1134 lY~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~~~~~~~~~~~L~~~a~~~~~~~ 1213 (1397)
||||++++
T Consensus 79 lY~d~l~~------------------------------------------------------------------------ 86 (130)
T 1ayo_A 79 IYLDKVTN------------------------------------------------------------------------ 86 (130)
T ss_dssp EEESCBCS------------------------------------------------------------------------
T ss_pred EEEecCCC------------------------------------------------------------------------
Confidence 99999985
Q ss_pred cccccCCCCCCCCCCCCCCCcccchhhHHHHHHhhccCCcccchhhhhhhhhcccCCCCccccccCCCccccceeccccc
Q psy5522 1214 WWKRAERPEDKKNPWAQVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTH 1293 (1397)
Q Consensus 1214 ~W~~~~~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT~~~~c~~~~~~~~~ 1293 (1397)
+ +.|++|.++|.+
T Consensus 87 ------------------------------------------------------------------~-~~c~~f~~~q~~ 99 (130)
T 1ayo_A 87 ------------------------------------------------------------------E-TLTLTFTVLQDI 99 (130)
T ss_dssp ------------------------------------------------------------------S-CEEEEEEEEESS
T ss_pred ------------------------------------------------------------------C-cEEEEEEEEEEE
Confidence 3 679999999999
Q ss_pred cccccCceeEEEeeccccchhheeeeccc
Q psy5522 1294 KVAQQKPVPVSIYDYYDQSRRARMFYEPR 1322 (1397)
Q Consensus 1294 ~v~~~~p~~v~~ydyy~~~~~~~~~y~~~ 1322 (1397)
+|+++|||+|+|||||+|+++|++||+++
T Consensus 100 ~V~~~qPa~V~VYDYY~p~~~~~~~Y~~~ 128 (130)
T 1ayo_A 100 PVRDLKPAIVKVYDYYETDEFAVAEYSAP 128 (130)
T ss_dssp CCSSCCCEEEEEEESSCTTCEEEEEECCT
T ss_pred EeccccceEEEEEeCCCCCceeEEEECCC
Confidence 99999999999999999999999999963
No 22
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=99.94 E-value=7.4e-24 Score=296.32 Aligned_cols=193 Identities=18% Similarity=0.205 Sum_probs=157.0
Q ss_pred CcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchHh---HHHhhcC-------CCCccEEEEE----
Q psy5522 957 STWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGKV---SHADMQG-------GAAKGLALTA---- 1022 (1397)
Q Consensus 957 s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqdv---l~al~~~-------~~~~~v~lt~---- 1022 (1397)
++++|||+|++++.++ |...+.++++||.+||+.+|+|.||||. ++||++. ..+..+++..
T Consensus 1247 ~ve~tayaLlall~~~-----~~~~~~~iv~wL~~qr~~~Gg~~STQdT~~Al~AL~~y~~~~~~~~~~~~v~v~~~~~~ 1321 (1676)
T 3cu7_A 1247 MVETTAYALLTSLNLK-----DINYVNPVIKWLSEEQRYGGGFYSTQDTINAIEGLTEYSLLVKQLRLSMDIDVSYKHKG 1321 (1676)
T ss_dssp HHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHHSCSSSCCSTTTTHHHHHHHHHHHHHHSCCCCCCCCCCEEESSSC
T ss_pred hHHHHHHHHHHHHhcC-----ChhHHHHHHHHHHhccCCCCCccccHHHHHHHHHHHHHHHHcCCCCCcEEEEEEeCCCC
Confidence 5789999999999876 4567889999999999999999999972 8888763 1111222211
Q ss_pred ---------------EEEeccccceeEE-EEeeeeEEEEEEEEEEeeccCCC-CCceeeccccccC--------CCCCce
Q psy5522 1023 ---------------YTLLPKKTRAVNM-TATGSGFAVVYISYQYNINVTGA-WPMFTLDPQVDKN--------SDSNHL 1077 (1397)
Q Consensus 1023 ---------------~v~lp~~~~~~~v-~~~G~G~~~~q~~~~Yn~~~~~~-~~~f~l~v~~~~~--------~~~~~~ 1077 (1397)
.+.+| .+++++| +++|+||+.+|+..+||++..++ .+.|+|+|++... ....++
T Consensus 1322 ~~~~~~v~~~n~~~~~~~l~-~~~~~~v~~~~G~G~~~~~v~~~Y~~~~~~~~~~~f~l~v~~~~~~~~~~~~~~~~~~~ 1400 (1676)
T 3cu7_A 1322 ALHNYKMTDKNFLGRPVEVL-LNDDLIVSTGFGSGLATVHVTTVVHKTSTSEEVCSFYLKIDTQDIEASHYRGYGNSDYK 1400 (1676)
T ss_dssp CCCCCCCCSSSCSCCCEECC-SSSCEEECCCSCCSCEEEEEEEEEEBSCCSSSCCSEEEEEEEECC------------CC
T ss_pred cceEEEECCCceEEEEEEec-CCCcEEEEEEeeeEEEEEEEEEEEeccCCCcCCCcceEEEEecccccccccccCCCcEE
Confidence 13455 4689999 99999999999999999987643 3469999987542 235579
Q ss_pred EEEEEEeecC-----CCCccEEEEEecCCcccccCCCCchhhcc--cCceeEEEEeCCeEEEEEEeeecCC-ccceeeec
Q psy5522 1078 QLSICSGFIG-----EGDSNMAVMEVSLPSGFTVDSDALPSLQV--SQNVKRVETKNGNTMVVLYFAYHQV-LPWTLMHY 1149 (1397)
Q Consensus 1078 ~l~vc~~y~~-----~~~s~Mailev~l~SGf~~~~~~l~~l~~--~~~i~~~e~~~~~~~v~lY~~~~~~-~~~~~~~~ 1149 (1397)
.+.+|++|++ ...+||||+||.|||||+|+.++|++|.. ..+++|+|++++++ ++|||+++. ++.+|.|+
T Consensus 1401 ~~~v~~~~~~~~~~~~~~s~maivdv~LpsGfe~~~~~l~~l~~~~~~~~~~~E~~~~~v--~~Y~d~~~~~~~~~~~~~ 1478 (1676)
T 3cu7_A 1401 RIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHV--ILQLNSIPSSDFLCVRFR 1478 (1676)
T ss_dssp EEEEEEEECCCTTCCSSCCCSEEEEEECCTTCEECHHHHHHHHSSTTCSCSBCCEETTEE--EEEESCCCSSSCEEEEEE
T ss_pred EEEEEEEEcCccccccCCCCcEEEEEecCcCCccCHHHHHHHhhccccceEEEEecCCEE--EEEecccCCCCCEEEEEE
Confidence 9999999998 56799999999999999999999999977 37899999999985 999999997 48999999
Q ss_pred ccccccch
Q psy5522 1150 LVSKYPRM 1157 (1397)
Q Consensus 1150 ~~~~~~~~ 1157 (1397)
+++.+|..
T Consensus 1479 ~~~~~~v~ 1486 (1676)
T 3cu7_A 1479 IFELFEVG 1486 (1676)
T ss_dssp EECSSCCS
T ss_pred EEEEeEec
Confidence 99999963
No 23
>4fxk_C Complement C4 gamma chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_C*
Probab=99.93 E-value=8.3e-27 Score=261.66 Aligned_cols=122 Identities=28% Similarity=0.495 Sum_probs=110.4
Q ss_pred CCCceEEEEEEeecCCC-CccEEEEEecCCcccccCCCCchhhccc--CceeEEEEeCCeEEEEEEeeecCCccceeeec
Q psy5522 1073 DSNHLQLSICSGFIGEG-DSNMAVMEVSLPSGFTVDSDALPSLQVS--QNVKRVETKNGNTMVVLYFAYHQVLPWTLMHY 1149 (1397)
Q Consensus 1073 ~~~~~~l~vc~~y~~~~-~s~Mailev~l~SGf~~~~~~l~~l~~~--~~i~~~e~~~~~~~v~lY~~~~~~~~~~~~~~ 1149 (1397)
...++.|+||++|+|.. .||||||||+|||||.|+.++|++|... ..|+|||+++++| +||||++++
T Consensus 9 ~~~~~~l~vC~~y~g~~~~SnMaI~eV~l~SGf~~~~~~L~~L~~~~~~~i~~~E~~~~~V--ilYfd~i~~-------- 78 (291)
T 4fxk_C 9 QESRVHYTVCIWRNGKVGLSGMAIADVTLLSGFHALRADLEKLTSLSDRYVSHFETEGPHV--LLYFDSVPT-------- 78 (291)
T ss_dssp CCCEEEEEEEEECCSCCSCCEEEEEEEECCTTEEECHHHHHHHHHSSSCCCSEEECCTTEE--EEEEEECCS--------
T ss_pred ccCEEEEEEEEEEcCCCCCCceEEEEEcCCCceeEchhhHHHHhhcccceeEEEEecCCeE--EEEEccCCC--------
Confidence 46789999999999864 6999999999999999999999999864 6899999999885 999999974
Q ss_pred ccccccchhhHHHHHHHHHhhcCCCCchHHHHHHHHHHhhCCCCchHHHHHHHhhcccccCCcccccccCCCCCCCCCCC
Q psy5522 1150 LVSKYPRMNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWA 1229 (1397)
Q Consensus 1150 ~~~~~~~~~~~~~a~~~l~~~~~~~~~~y~~al~aYal~la~~~~~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~ 1229 (1397)
T Consensus 79 -------------------------------------------------------------------------------- 78 (291)
T 4fxk_C 79 -------------------------------------------------------------------------------- 78 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccchhhHHHHHHhhccCCcccchhhhhhhhhcccCCCCccccccCCCccccceeccccccccccCceeEEEeecc
Q psy5522 1230 QVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTHKVAQQKPVPVSIYDYY 1309 (1397)
Q Consensus 1230 ~~~~s~~vE~t~Y~lL~~~~~~~~~~a~~i~~Wl~~q~n~~Ggf~stQdT~~~~c~~~~~~~~~~v~~~~p~~v~~ydyy 1309 (1397)
++.|++|.++|.|+|+++|||+|+|||||
T Consensus 79 ---------------------------------------------------~~~Cv~f~~~q~~~V~~~qPa~V~VYDYY 107 (291)
T 4fxk_C 79 ---------------------------------------------------SRECVGFEAVQEVPVGLVQPASATLYDYY 107 (291)
T ss_dssp ---------------------------------------------------SCEEEEEEEEESSCEESCCCEEEEEEESS
T ss_pred ---------------------------------------------------CeeEEEEEEEEEEEeccccceEEEEEeCc
Confidence 25799999999999999999999999999
Q ss_pred ccchhheeeeccc--cccccccccCCCC
Q psy5522 1310 DQSRRARMFYEPR--VATLCDICEGEDC 1335 (1397)
Q Consensus 1310 ~~~~~~~~~y~~~--~~~~c~~c~~~~c 1335 (1397)
+|+++|++||+++ ...||++|+++.|
T Consensus 108 ~p~~~~t~fY~~~~~s~~l~~lC~~d~C 135 (291)
T 4fxk_C 108 NPERRCSVFYGAPSKSRLLATLCSAEVC 135 (291)
T ss_dssp SCSSCCEEEECCCTTSSSSSCCCCHHHH
T ss_pred cCCceEEEEEcCCcCcchhhhhcCCccc
Confidence 9999999999986 3559999988765
No 24
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=99.91 E-value=2.4e-24 Score=207.72 Aligned_cols=100 Identities=35% Similarity=0.625 Sum_probs=93.8
Q ss_pred cEEEEEcCCCcccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEE
Q psy5522 98 YSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNIT 177 (1397)
Q Consensus 98 ~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~ 177 (1397)
..+|||||||||||||||+||++++|.+++|....++.|+|.||+|++|.+|....+.+|+++++|+||+++++|.|+|+
T Consensus 2 ~~~fi~tDr~iYrPGetV~~~~~~~~~~~~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~ 81 (102)
T 2p9r_A 2 SLVFVQTDKSIYKPGQTVKFRVVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVV 81 (102)
T ss_dssp CEEEEEESCSEECTTCEEEEEEEEECGGGCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEE
T ss_pred ceEEEECCCcccCCCCEEEEEEEEECCCCcCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEE
Confidence 57899999999999999999999999999998666689999999999999999998999999999999999999999999
Q ss_pred EEEcC-eEEEEEEEEeeecCC
Q psy5522 178 INVLD-QKFTKRFTVAEYVLP 197 (1397)
Q Consensus 178 v~~~~-~~~~~~F~VeEYvLP 197 (1397)
+..++ ...+++|+|||||||
T Consensus 82 ~~~~~~~~~~~~F~VeeyvlP 102 (102)
T 2p9r_A 82 VQKKSGGRTEHPFTVEEFVLP 102 (102)
T ss_dssp EECTTSCEEEEEEEECCCSCC
T ss_pred EEECCCCeEEEEEEEEEEcCC
Confidence 99863 568999999999998
No 25
>2icn_B Prolactin-inducible protein; beta-pleated sheet, complex, seminal fluid; HET: NAG BMA MAN P6G; 3.23A {Homo sapiens} PDB: 3es6_B*
Probab=99.82 E-value=2.3e-20 Score=179.73 Aligned_cols=97 Identities=14% Similarity=0.009 Sum_probs=88.8
Q ss_pred eeeEEEEecCCceeeeCCEEEEEEEEEcCCCccEEEEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeE
Q psy5522 712 FRPFFISLDLPYSVMRGEVVAIPVVVFNYLSQDLVADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGST 791 (1397)
Q Consensus 712 fkpffv~l~LPysv~rGE~~~l~~~VfNyl~~~~~v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~t 791 (1397)
+||||++++||||++|||+|.|+|+|||||++||.|++.|+.|++|++.+ ...++.|||++++++
T Consensus 5 ~qPffveltlPySv~rgE~f~lkatVfNyL~~Ci~V~v~L~~S~~~~~~~---------------~~~~s~ClC~~~~kt 69 (118)
T 2icn_B 5 RKIIIKNFDIPKSVRPNDEVTAVLAVQTELKECMVVKTYLISSIPLQGAF---------------NYKYTACLCDDNPKT 69 (118)
T ss_dssp CCCSEECCCCCSEECSSCCEEEEEEEEECCSSCEEEEEEEEESSCCCGGG---------------GCEEEEEECSSSCEE
T ss_pred cCCEEEEEeCCCcccCCCEEEEEEEEEeccCcCEEEEEEEcCCCCeEeec---------------CCcCCEEECCCCCEE
Confidence 89999999999999999999999999999999999999999999997642 125789999999999
Q ss_pred EEEEEEeceeeeEEEEEEEEeC----------------CCCceeEEEEEe
Q psy5522 792 TTFVITPKELGYIGIKVTATSN----------------LAGDSMEGKLLV 825 (1397)
Q Consensus 792 v~f~v~p~~lG~v~itV~A~~~----------------~~~D~v~k~L~V 825 (1397)
++|.|+|++ +++|+|+|++. +++|+++|+|+|
T Consensus 70 f~W~v~~~~--~Vnitv~ae~~~~~~iC~n~~~~vp~~g~~dtvik~LlV 117 (118)
T 2icn_B 70 FYWDFYTNR--TVQIAAVVDVIRELGICPDDAAVIPIKNNRFYTIEILKV 117 (118)
T ss_dssp EEEEECCSS--CEEEEEEEEECCCSSSSGGGCCCCCSSCCEECCEEEEEE
T ss_pred EEEEEEECc--EEEEEEEEEEEcCCCCCCCCccccCCcCcEEEEEEEEEe
Confidence 999999995 99999999863 478999999999
No 26
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=99.81 E-value=4.6e-20 Score=178.97 Aligned_cols=108 Identities=13% Similarity=0.028 Sum_probs=93.7
Q ss_pred EeeeEEEEecCCceeeeCCEEEEEEEEEcCCCccEEEEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCee
Q psy5522 711 VFRPFFISLDLPYSVMRGEVVAIPVVVFNYLSQDLVADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGS 790 (1397)
Q Consensus 711 vfkpffv~l~LPysv~rGE~~~l~~~VfNyl~~~~~v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~ 790 (1397)
++||||++++||||++|||+|.|+|+|||||++|+.|+|+|..+++|+..+ ..+++.|||+++++
T Consensus 4 t~k~~~~~l~lPysv~rgE~~~~~~~V~nyl~~~~~v~v~L~~s~~~~~~~---------------~~~~t~Clc~~~~~ 68 (118)
T 3es6_B 4 TRKIIIKNFDIPKSVRPNDEVTAVLAVQTELKECMVVKTYLISSIPLQGAF---------------NYKYTACLCDDNPK 68 (118)
T ss_dssp CCCCCEECCCCCSEECSSCCEEEEEEEEECCSSCEEEEEEEEESSCCCSGG---------------GCEEEEEECSSSCE
T ss_pred ccceEEEEeeCCceEecCCEEEEEEEEEecccceEEEEEEecCCcCEEccC---------------CCcccEEecCCCce
Confidence 489999999999999999999999999999999999999999999986532 22678999999999
Q ss_pred EEEEEEEeceeeeEEEEEEEEeCCCCceeEEEEEecCCCeeeEEE
Q psy5522 791 TTTFVITPKELGYIGIKVTATSNLAGDSMEGKLLVKPEGETQYKN 835 (1397)
Q Consensus 791 tv~f~v~p~~lG~v~itV~A~~~~~~D~v~k~L~V~peG~~~~~t 835 (1397)
+++|.|+| +|+++|+|+|++....|.....+.|.|+|-.+...
T Consensus 69 t~~W~i~~--lg~vniTvsAea~~~~d~C~~e~~vvP~~~~~d~~ 111 (118)
T 3es6_B 69 TFYWDFYT--NRTVQIAAVVDVIRELGICPDDAAVIPIKNNRFYT 111 (118)
T ss_dssp EEEEEECC--SSCEEEEEEEEECCCSSSSGGGCCCCCSSCCEEEE
T ss_pred EEEEEEEe--CCeEEEEEEEEEecCcCccCCCceEcCCcCcEEEE
Confidence 99999987 69999999999876667776777777777766554
No 27
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=99.80 E-value=1.6e-20 Score=248.22 Aligned_cols=192 Identities=17% Similarity=0.294 Sum_probs=155.4
Q ss_pred CcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchHh---HHHhhcC-----C---CCccEEEE----
Q psy5522 957 STWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGKV---SHADMQG-----G---AAKGLALT---- 1021 (1397)
Q Consensus 957 s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqdv---l~al~~~-----~---~~~~v~lt---- 1021 (1397)
+++.|||+|++++.+++. ..+.++++||.+||+.+|+|.|||+. ++||++. . .+..+++.
T Consensus 481 ~ve~TayaLlall~~~~~-----~~~~~~v~wL~~qq~~~Ggw~STQdT~~Al~AL~~y~~~~~~~~~~~~~v~v~~~~~ 555 (915)
T 2hr0_B 481 NVEATSYALLALLQLKDF-----DFVPPVVRWLNEQRYYGGGYGSTQATFMVFQALAQYQKDAPDHQELNLDVSLQLPSR 555 (915)
T ss_dssp HHHHHHHHHHHHHHTTCT-----TTHHHHHHHHHTCCCSSSSCCSHHHHHHHHHHHHHHHHHCCCCCSSCCCCCCCSSCS
T ss_pred chHHHHHHHHHHHhcCCh-----hhHHHHHHHHHhcccCCCCccchhhHHHHHHHHHHHHHHcCcCCCCcEEEEEEeCCC
Confidence 578999999999998753 45888999999999999999999982 7887662 1 11111110
Q ss_pred ----------------EEEEeccccceeEEEEeeeeEEEEEEEEEEeeccCC--CCCceeeccccccC--------CCCC
Q psy5522 1022 ----------------AYTLLPKKTRAVNMTATGSGFAVVYISYQYNINVTG--AWPMFTLDPQVDKN--------SDSN 1075 (1397)
Q Consensus 1022 ----------------~~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~~--~~~~f~l~v~~~~~--------~~~~ 1075 (1397)
..+.+| .+++++|+++|+||+++|+.++||++..+ .|+.|+|+|++.+. ....
T Consensus 556 ~~~~~~~v~~~n~~~~~~~~l~-~~~~v~v~~~G~G~~~~~v~~~Y~~~~~~~~~~~~f~l~v~~~~~~~~~~~~~~~~~ 634 (915)
T 2hr0_B 556 SSKITHRIHWESASLLRSEETK-ENEGFTVTAEGKGQGTLSVVTMYHAKAKDQLTCNKFDLKVTIKPAPETEKRPQDAKN 634 (915)
T ss_dssp SSCCCCCCCSSSSCCCCCCCCC-CSSCCCCCCCCSSSCCCCCCCSCCCCCSSCCSCSSEEEEEEEEECCTTSCCCSSCSE
T ss_pred CcceEEEECCCCcceEEEEEEc-CCCeEEEEEEEEEEEEEEEEEEEeccCCCcCCCCceEEEEEEeccccccccCCCCCc
Confidence 011222 36789999999999999999999998763 37899999987532 2345
Q ss_pred ceEEEEEEeecCCCCccEEEEEecCCcccccCCCCchhhccc--CceeEEEE-----eCCeEEEEEEeeecCCc-cceee
Q psy5522 1076 HLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALPSLQVS--QNVKRVET-----KNGNTMVVLYFAYHQVL-PWTLM 1147 (1397)
Q Consensus 1076 ~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~~l~~~--~~i~~~e~-----~~~~~~v~lY~~~~~~~-~~~~~ 1147 (1397)
.+.+.||++|++...+||+||||+|||||+|+.++|+.|... ..++++|+ ++++ |++|||+++.. +++|.
T Consensus 635 ~~~~~v~v~~~~~~~~~maivdv~lpsGfe~~~~~l~~l~~~~~~~~~~~E~~~~~~~d~~--v~~Y~d~l~~~~~~~~~ 712 (915)
T 2hr0_B 635 TMILEICTRYRGDQDATMSILDISMMTGFAPDTDDLKQLANGVDRYISKYELDKAFSDRNT--LIIYLDKVSHSEDDCLA 712 (915)
T ss_dssp EEEEEEEEEECSSSCBCSEEEEEECCSSEEECHHHHHHHHHSSSCSCSEECCCC----CCE--EEEEESCBCSSSCCCEE
T ss_pred EEEEEEEEEecCCCCCCceEEEEecCCCCccCHhhHHHHhhccccceEEEEeecccCCCCE--EEEEeccCCCCCCEEEE
Confidence 789999999998888999999999999999999999999774 78999998 6776 59999999964 89999
Q ss_pred ecccccccc
Q psy5522 1148 HYLVSKYPR 1156 (1397)
Q Consensus 1148 ~~~~~~~~~ 1156 (1397)
|++++.+|.
T Consensus 713 ~~~~~~~~v 721 (915)
T 2hr0_B 713 FKVHQYFNV 721 (915)
T ss_dssp EEEEESSCC
T ss_pred EEEEEEEEe
Confidence 999999996
No 28
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=99.58 E-value=1.6e-15 Score=192.34 Aligned_cols=254 Identities=17% Similarity=0.185 Sum_probs=166.0
Q ss_pred cchHHHHHHHHHHhccc-cHHHHHHHHHHHHhcccc---ceeeecCCCCccccCCCC---CCCCcchhHHHHHHHHHccC
Q psy5522 901 FVPNIVVLEYLKKTYQL-TDAIEAKASRYLETGYQQ---ELTYRRPDGSFSAFGTTD---PNGSTWLTAFVAKSFRQAAS 973 (1397)
Q Consensus 901 ~~p~i~~l~yL~~~~~l-~~~~~~~a~~~l~~gy~~---~l~y~~~dGsfs~~~~~~---~~~s~wlTAyvl~~~~~a~~ 973 (1397)
..-..+++++|..++.. +.....||.++|.+...+ ...+++++++.+.|+-+. ..+++|.||+|+++|..++.
T Consensus 311 vwdta~~l~AL~~~G~~~~~~~~~ka~~~L~~~q~~~~g~~~~~~~~~s~GgW~f~~~~~~~p~v~dTA~al~AL~~~~~ 390 (631)
T 2sqc_A 311 VWDTGLAVLALRAAGLPADHDRLVKAGEWLLDRQITVPGDWAVKRPNLKPGGFAFQFDNVYYPDVCDTAVVVWALNTLRL 390 (631)
T ss_dssp HHHHHHHHHHHHHTTCCTTCHHHHHHHHHHHHTCCCSCCGGGGTCTTSCCCCBCSSSSCTTCCBHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhcCCCCCChhhhcCCCCCCCCccccCCCCCCchHHHHHHHHHHHHcCC
Confidence 34567788888888864 345677999999875322 123566677777775321 24789999999999999886
Q ss_pred C-CccCHHHHHHHHHHHHhcccCCCccccchH-----hHHHhhcC----CCC-ccEEEEEEEEeccccceeEEEEeeeeE
Q psy5522 974 H-TTIDESVILEALAWLSSNQAVNGSFPEVGK-----VSHADMQG----GAA-KGLALTAYTLLPKKTRAVNMTATGSGF 1042 (1397)
Q Consensus 974 ~-i~vd~~~~~~~~~WL~~~q~~~G~F~stqd-----vl~al~~~----~~~-~~v~lt~~v~lp~~~~~~~v~~~G~G~ 1042 (1397)
. ..++...+.++++||.+.|+.+|||..-.. .+..+.-. ..+ .++..|+++..
T Consensus 391 ~~~~~~~~~l~~a~~wLls~Q~~dGgf~~~~~~~~~~~~~~~~F~~~~~~~d~~~vd~Ta~vl~---------------- 454 (631)
T 2sqc_A 391 PDERRRRDAMTKGFRWIVGMQSSNGGWGAYDVDNTSDLPNHIPFSDFGEVTDPPSEDVTAHVLE---------------- 454 (631)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCTTSCBCSSCSSCCCSGGGGSTTCSSSCSSCCCBHHHHHHHHH----------------
T ss_pred CccchhHHHHHHHHHHHHhhcCCCCCCCccCCCCccccccccccccCCcccCCCCchHHHHHHH----------------
Confidence 4 235667899999999999999999964211 11111000 000 11112221111
Q ss_pred EEEEEEEEEeeccCCCCCceeeccccccCCCCCceEEEEEEeecCCCCccEEEEEecCCcccccCCCCchhhcccCceeE
Q psy5522 1043 AVVYISYQYNINVTGAWPMFTLDPQVDKNSDSNHLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKR 1122 (1397)
Q Consensus 1043 ~~~q~~~~Yn~~~~~~~~~f~l~v~~~~~~~~~~~~l~vc~~y~~~~~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~~ 1122 (1397)
+|.+.
T Consensus 455 ---------------------------------------------------aL~~~------------------------ 459 (631)
T 2sqc_A 455 ---------------------------------------------------CFGSF------------------------ 459 (631)
T ss_dssp ---------------------------------------------------HHHTT------------------------
T ss_pred ---------------------------------------------------HHHhc------------------------
Confidence 22211
Q ss_pred EEEeCCeEEEEEEeeecCCccceeeecccccccchhhHHHHHHHHHhhcC---------CCCchHHHHHHHHHHhhCCCC
Q psy5522 1123 VETKNGNTMVVLYFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYIVKNLA---------GTEDAYAIAICSYALHLAQHP 1193 (1397)
Q Consensus 1123 ~e~~~~~~~v~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~---------~~~~~y~~al~aYal~la~~~ 1193 (1397)
+. +. ....+++|+.||.+.-. +....|..+.+.+||+.++..
T Consensus 460 -----g~----------~~--------------~~~~i~rai~~L~~~Q~~DGsw~g~wg~~~~y~Ta~~l~aL~~~g~~ 510 (631)
T 2sqc_A 460 -----GY----------DD--------------AWKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGID 510 (631)
T ss_dssp -----TC----------CT--------------TSHHHHHHHHHHHHHCCTTSCCCCSSBSSHHHHHHHHHHHHHHTTCC
T ss_pred -----CC----------Cc--------------cHHHHHHHHHHHHHhcCCCCCCCCCCCCCchHHHHHHHHHHHHhCCc
Confidence 11 11 45689999999987542 245689999999999999953
Q ss_pred ----chHHHHHHHhhcccccCCcccccccCCCCCCCCCCCCCCCcccchhhHHHHHHhhccCCc--ccchhhhhhhhhcc
Q psy5522 1194 ----VKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWAQVPNSVDVEMTSYALLSYLDRGLV--EDTLPILTWLVTQQ 1267 (1397)
Q Consensus 1194 ----~~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~~~~~~--~~a~~i~~Wl~~q~ 1267 (1397)
..+.+++-|.+....+|| |...... -....+......+++.|+|||++++..+.. ....++++||.++|
T Consensus 511 ~~~~~i~rav~~L~s~Q~~DGg---Wg~~~~s--y~~~~~~~~~~s~v~~Ta~ALlaL~~ag~~~~~~i~rav~wL~~~Q 585 (631)
T 2sqc_A 511 TREPYIQKALDWVEQHQNPDGG---WGEDCRS--YEDPAYAGKGASTPSQTAWALMALIAGGRAESEAARRGVQYLVETQ 585 (631)
T ss_dssp TTSHHHHHHHHHHHHTCCTTSC---CCCCGGG--GTCGGGTTCSSCCHHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHhCcCCCC---cCCcccc--ccccccCCCCCCCHHHHHHHHHHHHHcCCCChHHHHHHHHHHHhcc
Confidence 345677878877665555 6432110 000111122345899999999999986643 45678999999999
Q ss_pred cCCCCccccccC
Q psy5522 1268 NDQGGFASTQMS 1279 (1397)
Q Consensus 1268 n~~Ggf~stQdT 1279 (1397)
|+.|||.++|||
T Consensus 586 ~~dGgw~~~~~t 597 (631)
T 2sqc_A 586 RPDGGWDEPYYT 597 (631)
T ss_dssp CTTSCCCCCSCC
T ss_pred CCCCCcCCCCcc
Confidence 999999999999
No 29
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=99.53 E-value=5.8e-15 Score=188.84 Aligned_cols=283 Identities=14% Similarity=0.110 Sum_probs=176.5
Q ss_pred cccCcchhhc-cCCCchhhhh--cccchHHHHHHHHHHhcccc----HHHHHHHHHHHHhccccc------eeeecCC-C
Q psy5522 879 SIPNLANLIK-MPFGCGEQNM--LNFVPNIVVLEYLKKTYQLT----DAIEAKASRYLETGYQQE------LTYRRPD-G 944 (1397)
Q Consensus 879 ~~~~l~~Ll~-~P~GCgEQ~m--~~~~p~i~~l~yL~~~~~l~----~~~~~~a~~~l~~gy~~~------l~y~~~d-G 944 (1397)
.++.++.++- .|-|+.-|.. +...-+.+++.+|..++... .+...+|.++|.....+. ..|++.+ |
T Consensus 361 ~l~~l~~~l~~~~dG~~~q~~~gs~vwdTalal~AL~~ag~~~~~~~~~~l~ka~~~L~~~Q~~~~~~d~~~~~r~~~~G 440 (732)
T 1w6k_A 361 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQMRKG 440 (732)
T ss_dssp HHHTSGGGEEEETTEEEECSSSCCHHHHHHHHHHHHHHTTGGGCGGGHHHHHHHHHHHHHHSCCCCCTTGGGGTCCCCTT
T ss_pred HHHHHHHhheeCCCCceeCCCCCCchHHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHHhcccccCCcccccccCCCCC
Confidence 3444433322 2555443432 33456678888888877533 456679999998765443 5677776 8
Q ss_pred CccccCCCCCCCCcchhHHHHHHHHHccCCC-----ccCHHHHHHHHHHHHhcccCCCccccch-----HhHHHhhcCC-
Q psy5522 945 SFSAFGTTDPNGSTWLTAFVAKSFRQAASHT-----TIDESVILEALAWLSSNQAVNGSFPEVG-----KVSHADMQGG- 1013 (1397)
Q Consensus 945 sfs~~~~~~~~~s~wlTAyvl~~~~~a~~~i-----~vd~~~~~~~~~WL~~~q~~~G~F~stq-----dvl~al~~~~- 1013 (1397)
+|+++...+..++++.||+|+++|..+++.. .++.+.+.++++||.+.|++||||.+-. ..++.+....
T Consensus 441 GW~f~~~~~~~pd~d~TA~vl~aL~~~~~~~~~~g~~~~~~~i~~av~wLls~Q~~DGgw~a~~~~~~~~~l~~i~~~e~ 520 (732)
T 1w6k_A 441 GFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPRERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEV 520 (732)
T ss_dssp CCBSSCTTTCCBCHHHHHHHHHHHHHHHHHCTTCCSCCCHHHHHHHHHHHHTTCCTTSCBCSSSCCCSCGGGGGGCCCSS
T ss_pred eecCCCCCCCCCccccHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHhcCCCCCEEeecCCCchHHHhhCcchhc
Confidence 8876644334578999999999999886543 4788899999999999999999996421 1222221000
Q ss_pred -----CC-ccEEEEEEEEeccccceeEEEEeeeeEEEEEEEEEEeeccCCCCCceeeccccccCCCCCceEEEEEEeecC
Q psy5522 1014 -----AA-KGLALTAYTLLPKKTRAVNMTATGSGFAVVYISYQYNINVTGAWPMFTLDPQVDKNSDSNHLQLSICSGFIG 1087 (1397)
Q Consensus 1014 -----~~-~~v~lt~~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~~~~~~f~l~v~~~~~~~~~~~~l~vc~~y~~ 1087 (1397)
.+ ..+..|+.+..
T Consensus 521 fg~~~~d~s~v~~Ta~vL~------------------------------------------------------------- 539 (732)
T 1w6k_A 521 FGDIMIDYTYVECTSAVMQ------------------------------------------------------------- 539 (732)
T ss_dssp CSSCSSCCCBHHHHHHHHH-------------------------------------------------------------
T ss_pred ccccccCCCcchHHHHHHH-------------------------------------------------------------
Confidence 00 00111111000
Q ss_pred CCCccEEEEEecCCcccccCCCCchhhcccCceeEEEEeCCeEEEEEEeeecCCccceeeecccccccchhhHHHHHHHH
Q psy5522 1088 EGDSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKRVETKNGNTMVVLYFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYI 1167 (1397)
Q Consensus 1088 ~~~s~Mailev~l~SGf~~~~~~l~~l~~~~~i~~~e~~~~~~~v~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l 1167 (1397)
+|.+. +.. .+. |+ +-..++.+++|+.||
T Consensus 540 ------aL~~~-----------------------------~~~--------~~~------~~---~~~~~~~i~rAv~yL 567 (732)
T 1w6k_A 540 ------ALKYF-----------------------------HKR--------FPE------HR---AAEIRETLTQGLEFC 567 (732)
T ss_dssp ------HHHHH-----------------------------HHH--------CTT------SS---HHHHHHHHHHHHHHH
T ss_pred ------HHHHh-----------------------------ccc--------ccc------cc---chhhHHHHHHHHHHH
Confidence 22211 000 000 00 000356899999999
Q ss_pred HhhcC--C-------CCchHHHHHHHHHHhhCCCCc--------hHHHHHHHhhcccccCCcccccccCCCCCCCCCCCC
Q psy5522 1168 VKNLA--G-------TEDAYAIAICSYALHLAQHPV--------KDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWAQ 1230 (1397)
Q Consensus 1168 ~~~~~--~-------~~~~y~~al~aYal~la~~~~--------~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~~ 1230 (1397)
++.-. + ....|..+.+.+||+++|... .+.+.+-|.+....+|| |......-. ...|..
T Consensus 568 ~~~Q~~DGsW~g~wg~~~~Y~T~~al~AL~~aG~~~~~~~~~~~i~rav~~Lls~Q~~DGG---Wge~~~s~~-~~~y~~ 643 (732)
T 1w6k_A 568 RRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGTACAEVSRACDFLLSRQMADGG---WGEDFESCE-ERRYVQ 643 (732)
T ss_dssp HHHSCTTSCCCCSSBSSHHHHHHHHHHHHHHTTCCCBTTBCCHHHHHHHHHHHTTCCTTSC---CCBCTHHHH-HTSCCB
T ss_pred HhhcCCCCCccCcCCCccchHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHhcccCCC---CCCCCcccc-ccccCC
Confidence 88642 1 456899999999999999742 35577778877766654 543210000 001111
Q ss_pred CCCcccchhhHHHHHHhhccCCc--ccchhhhhhhhhcccCCCCccccccC
Q psy5522 1231 VPNSVDVEMTSYALLSYLDRGLV--EDTLPILTWLVTQQNDQGGFASTQMS 1279 (1397)
Q Consensus 1231 ~~~s~~vE~t~Y~lL~~~~~~~~--~~a~~i~~Wl~~q~n~~Ggf~stQdT 1279 (1397)
. ..-+++.||||||+++..+.. ....++++||.+|||..|||.+++.|
T Consensus 644 ~-~~s~v~~TAwALlALl~ag~~~~~~i~r~v~wL~~~Q~~~Ggf~~~~~~ 693 (732)
T 1w6k_A 644 S-AQSQIHNTCWAMMGLMAVRHPDIEAQERGVRCLLEKQLPNGDWPQENIA 693 (732)
T ss_dssp C-SSCCHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHCCTTSCCCCCSCC
T ss_pred C-CCCCHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHhcCCCCCccCCccc
Confidence 1 234789999999999977644 34667899999999999999988876
No 30
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=99.15 E-value=4.9e-11 Score=155.46 Aligned_cols=109 Identities=15% Similarity=0.113 Sum_probs=84.3
Q ss_pred CCcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchHh---HHHhhcCC------CC--ccEEEEE--
Q psy5522 956 GSTWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGKV---SHADMQGG------AA--KGLALTA-- 1022 (1397)
Q Consensus 956 ~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqdv---l~al~~~~------~~--~~v~lt~-- 1022 (1397)
.++++|||+|++++...+ |...+.++++||.+||+.+|+|.||||. |+||+++. .+ .+|++..
T Consensus 581 ~~VEttayaLla~l~~~~----~~~~a~~iv~WL~~Qr~~~Ggf~STQdTv~AL~ALa~y~~~~~~~~~~~~~V~v~~~~ 656 (767)
T 4fxk_B 581 LWIETTAYALLHLLLHEG----KAEMADQASAWLTRQGSFQGGFRSTQDTVIALDALSAYWIASHTTEERGLNVTLSSTG 656 (767)
T ss_dssp HHHHHHHHHHHHHHHHTS----SCHHHHHHHHHHHHTCCTTSSCSSHHHHHHHHHHHHHHHHHTCCCSCCCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCC----chhHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHhcccCCCCceEEEEEecC
Confidence 358999999999987654 4567899999999999999999999983 89988731 11 2333331
Q ss_pred --------------------EEEeccccceeEEEEeeeeEEEEEEEEEEeeccCCC--CCceeecccc
Q psy5522 1023 --------------------YTLLPKKTRAVNMTATGSGFAVVYISYQYNINVTGA--WPMFTLDPQV 1068 (1397)
Q Consensus 1023 --------------------~v~lp~~~~~~~v~~~G~G~~~~q~~~~Yn~~~~~~--~~~f~l~v~~ 1068 (1397)
...+|..+++++|+++|+|||++|+.++||++.++. |..|+|+|++
T Consensus 657 ~~~~~~~~~~~~~~~~~~lq~~~~~~~~~~~~v~~~G~G~~~~qv~~~Yn~~~~~~~~~~~l~v~v~~ 724 (767)
T 4fxk_B 657 RNGFKSHALQLNNRQIRGLEEELQFSLGSKINVKVGGNSKGTLKVLRTYNVLDMKNTTCQDLQIEVTV 724 (767)
T ss_dssp TTEEECCEEECSSCCCSSCCEEECSSSCEEEECCCSSCCCCEEEEEEEEEESSCCTTSCSSCEEEEEE
T ss_pred cCCcceeEEEecCcceeEEEEEeecCCCcEEEEEEEEEEEEEEEEEEEEeccCCCCCCCcceEEEEEE
Confidence 124567788999999999999999999999988755 5556666654
No 31
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=98.55 E-value=0.0003 Score=89.66 Aligned_cols=397 Identities=12% Similarity=0.078 Sum_probs=218.7
Q ss_pred eeecCCeEEEEEEeecCC-cc--EEEEEEEEeecCCCCeeEEeEEEEEC-CCceeEEEEEcCCC-CCceeEEEEEecC--
Q psy5522 9 VLRPNGEYHVAVSTQAVS-EA--TQVSVEVGGKQDSGGEFRTKQLLSVD-PFSTRIVKLDIGDL-GPGQYNLTVKGSG-- 81 (1397)
Q Consensus 9 ~lr~g~~~~v~v~l~~~~-~~--v~v~v~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~f~vP~~-~~~~~~l~v~g~~-- 81 (1397)
+-|||..-++-+-+.+.+ .+ -.+++.|..+ + | +......+..+ .......+|++|.. ..|.|++.+...+
T Consensus 116 iYrPGqtV~~r~i~~d~~~~p~~~~v~v~l~dP-~-g-~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~ 192 (645)
T 2hr0_A 116 IYTPGSTVLYRIFTVNHKLLPVGRTVMVNIENP-E-G-IPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYENSP 192 (645)
T ss_dssp BCCTTSEEEEEEEEECTTSCBCCCEEEEEEECT-T-S-CEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEETTCT
T ss_pred cCCCCCEEEEEEEEECCCCcccCceEEEEEECC-C-C-CEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEECCCC
Confidence 358888877776666533 11 2467777755 2 3 22222344342 34445689999954 5688999988632
Q ss_pred ceeeEeeEEEE---EEecccEEEEEcCCCcccCC--ceeEEEEEEEcCCCccCCC-cceEEEEECCCCC-eEE---eeee
Q psy5522 82 SLNFYNSTGLV---YVHKSYSVFIQLDKAIYKPG--DLVRFRAIVLNSHLKPSVT-GALEIFITDGKGN-RIK---QWTR 151 (1397)
Q Consensus 82 ~~~f~~~~~v~---~~~~~~~vfIqTDKpIYkPG--qtV~fRvv~ld~~l~P~~~-~~~~v~I~DP~g~-~I~---qw~~ 151 (1397)
+..+ ++.+. +...+..+-|..++..|.+| +++.+.+-+.--..+|+.+ ..+.+.+.+.... .+. +-..
T Consensus 193 ~~~~--~~~F~VeeYvlP~feV~i~~~~~~~~~~~~~~~~v~v~a~Y~~G~Pv~G~a~v~~~~~~~~~~~~~~~~~~~~~ 270 (645)
T 2hr0_A 193 QQVF--STEFEVKEYVLPSFEVIVEPTEKFYYIYNEKGLEVTITARFLYGKKVEGTAFVIFGIQDGEQRISLPESLKRIP 270 (645)
T ss_dssp TSEE--EEEEECCCSCCCCCEEEEEESSSSEETTCTTCEEEEEEEECTTSCBCCEEEEEEEEEEETTEEEECGGGCEEEE
T ss_pred CceE--EEEEEEeeccCCeEEEEEEcCceeEecCCCcEEEEEEEEEEcCCCeeeeEEEEEEEEeeCCeeeecCchheeEE
Confidence 2223 23333 33457788899999999999 9999999998888899843 2333334332211 010 1112
Q ss_pred eccCCceeeeeeecC-CC---C-----CCeeEEEEEEE-c--C----eEEEEEEEEeeecCCcEEEEEeCCCceEeeCCe
Q psy5522 152 ALTTRGVFSADLQLS-KS---P-----VLGDWNITINV-L--D----QKFTKRFTVAEYVLPKFEVNVNVPPHATFKDSK 215 (1397)
Q Consensus 152 ~~~~~Gi~~~sf~L~-~~---~-----~lG~y~I~v~~-~--~----~~~~~~F~VeEYvLPkFeV~v~~p~~i~~~~~~ 215 (1397)
..+..|-++..++.. +. + ....+.|.+.. + + ...+.++.| ..-.+.+.+......+..+..
T Consensus 271 ~~dg~g~~~l~~~~~~~~~~~~~~~~~~~~~~~v~a~V~e~~g~~~~~~~~~~i~i---~~~~~~i~~~~~~~~~~~g~~ 347 (645)
T 2hr0_A 271 IEDGSGEVVLSRKVLLDGVQNLRAEDLVGKSLYVSATVILHSGSDMVQAERSGIPI---VTSPYQIHFTKTPKYFKPGMP 347 (645)
T ss_dssp EBTTEEEEEECHHHHHTSCSSCSGGGGTTCEEEEEEEEEESSSSCEEEEEEEEEEE---ESCSCEEECSSSCSBCCTTSE
T ss_pred eeCCeEEEEEeHHHhhhhhcccccccccCcEEEEEEEEEECCCCeEEEeeeeeEEE---EEeeEEEEEEeCccccCCCCc
Confidence 234445555443321 11 1 12256666665 2 2 123444554 334466777654555667889
Q ss_pred EEEEEEEEEecCccccceEEEEEEeccccCccccccccceeEEeecCceEEEEEechhhhccccccceEEEEEEEEEECC
Q psy5522 216 VVISVNAKYTYGKPVKGEATITAYPTIFSGVIQPLFQTPVRKVVPIDGKTVIEFDVVKELQLTDEYERNIHFDVAVEEAL 295 (1397)
Q Consensus 216 ~~v~v~AkYtyGkPV~G~v~v~v~~~~~~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~~~~~~~~l~V~a~VtE~g 295 (1397)
+.+.+.+.+.-|+|++|. .++++. |+ ..+.+++.+|.+.|.|+++. . ...+.|+|+..+..
T Consensus 348 ~~~~v~~~~~dG~p~~~~-~v~l~~----~~-------~~~~~t~~~G~~~~~i~~~~-~------~g~y~l~v~~~~~~ 408 (645)
T 2hr0_A 348 FDLMVFVTNPDGSPAYRV-PVAVQG----ED-------TVQSLTQGDGVAKLSINTHP-S------QKPLSITVRTKKQE 408 (645)
T ss_dssp EEEEEEEECSSSSBCSCC-CEEESS----SC-------CSCCCCCTTSEEEEEEECCS-C------SSCEEEEEEECCTT
T ss_pred EEEEEEEEcCCCCccCCE-EEEEec----Cc-------ceeeEECCCCcEEEEEECCC-C------CeEEEEEEEEcCCC
Confidence 999999999999999983 344432 11 12346788999999988754 1 13456666654432
Q ss_pred cce-EEeeEEEEEEEE------eeeEEEEEecCCcccCCCeEEEEEEEEccCCCccCCCC-ceEEEEEeeeccccccce-
Q psy5522 296 TGR-RQNNTGSVVFHK------HKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVTDNN-NMVQVRHGFSYDESKYEA- 366 (1397)
Q Consensus 296 TG~-~~~~~~~i~i~~------~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~~~~-~~V~v~~~~~~~~~~~~~- 366 (1397)
+. ...++..+.+.. +.-.|.+......|++|.+..+.|... ++|..+.. ..+.+.+..+ +...
T Consensus 409 -~~~~~~a~~~~~~~~~~~~~~s~~~l~i~~~~~~~~~Ge~~~v~v~~~---~s~~~~~~~~~~~y~v~~r----g~Il~ 480 (645)
T 2hr0_A 409 -LSEAEQATRTMQALPYSTVGNSNNYLHLSVLRTELRPGETLNVNFLLR---MDRAHEAKIRYYTYLIMNK----GRLLK 480 (645)
T ss_dssp -SCTTTSCEEEEEEBCCCCTTSCCCEEEEEECCCCCCTTSEEEEEEEEE---CCTTSTTTCCEEEEEEEET----TEEEE
T ss_pred -CCcccccceEEEEEeccCCCcCCCeEEEecCCCCcCCCCEEEEEEEEC---CCccccCceEEEEEEEEeC----CcEEE
Confidence 21 011122222211 234466666667899999988888743 33322111 1232211111 1111
Q ss_pred -eeEeeC-CCeeEEEEEeCCCCCceeEEEEEEEecC----cceEEE-EEEeecC--CCCCeEEEEec---CCCCCCCCeE
Q psy5522 367 -NQYKLD-RNGMIKLVYYPPANENVTTLGIEAEYLD----IKEWFS-TISASES--PSNSFIQAALL---TQNPKVNKDV 434 (1397)
Q Consensus 367 -~~~ttd-~~G~~~f~i~~~~~~~~~~l~l~a~~~~----~~~~~~-~v~~~~S--~s~s~L~i~~~---~~~~~~G~~~ 434 (1397)
...... .+|...|+|..+.++. ....|.+.+-. ...... ....+.- .-..-|.|..+ ++.++||+++
T Consensus 481 ~~~~~~~~~~~~~~~~i~v~~~~~-P~~~v~v~~v~p~~~~~ge~v~d~~~~~v~~~~~~~l~v~~~~~~~~~~~Pg~~v 559 (645)
T 2hr0_A 481 AGRQVREPGQDLVVLPLSITTDFI-PSFRLVAYYTLIGASGQREVVADSVWVDVKDSCVGSLVVKSGQSEDRQPVPGQQM 559 (645)
T ss_dssp EEEEECCTTCSEEEEEEECCTTSC-SEEEEEEEEEEECSSSSEEEEEEEEEEECCCCCSSCCEEEECSCSCSCCCTTCEE
T ss_pred ccEEEecCCCcEEEEEEECCcccC-ccEEEEEEEEeccCCCCCcEEEEEEEEEEcccccceEEEEeccCCccccCCCCcE
Confidence 122222 3677888888765553 34555555432 111111 1111111 11245777763 8899999999
Q ss_pred EEEEEec
Q psy5522 435 ELEINST 441 (1397)
Q Consensus 435 ~v~v~s~ 441 (1397)
++.|...
T Consensus 560 ~l~v~~~ 566 (645)
T 2hr0_A 560 TLKIEGD 566 (645)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 9999864
No 32
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=98.35 E-value=0.00094 Score=84.27 Aligned_cols=399 Identities=12% Similarity=0.097 Sum_probs=218.7
Q ss_pred eeecCCeEEEEEEeecCC-cc--EEEEEEEEeecCCCCeeEEeEEEEECCCceeEEEEEcCCC-CCceeEEEEEecCc-e
Q psy5522 9 VLRPNGEYHVAVSTQAVS-EA--TQVSVEVGGKQDSGGEFRTKQLLSVDPFSTRIVKLDIGDL-GPGQYNLTVKGSGS-L 83 (1397)
Q Consensus 9 ~lr~g~~~~v~v~l~~~~-~~--v~v~v~L~~~~~~~~~~~~~~~~~~~~~~~~~~~f~vP~~-~~~~~~l~v~g~~~-~ 83 (1397)
+-|||..-++-+-+.+.+ .+ ..+++.|..+ + | +... .. .+..+ ...+|++|.. ..|.|++.++..++ .
T Consensus 114 iYrPGqtV~~r~i~~d~~~~p~~~~~~v~i~dP-~-g-~~i~-~~-~~~~~--~~~~f~Lp~~~~~G~w~i~v~~~~~~~ 186 (627)
T 3hrz_A 114 IYTPGSPVLYRVFSMDHNTSKMNKTVIVEFQTP-E-G-ILVS-SN-SVDLN--FFWPYNLPDLVSLGTWRIVAKYEHSPE 186 (627)
T ss_dssp EECTTCEECEEEEESCC-------CEEEEEECT-T-C-CEEE-EE-EEBTT--BCCCEECCSSCCCEEEEEEEEETTCSC
T ss_pred ccCCCCEEEEEEEEECCCCcccCccEEEEEECC-C-C-CEEE-EE-Eeccc--eEEEEECCCCCCCeeEEEEEEECCCce
Confidence 467888877777666533 12 2455666655 2 3 2222 22 23333 3458899854 56889999986432 2
Q ss_pred eeEeeEEEE-EEecccEEEEEcCCCcc--cCCceeEEEEEEEcCCCccCCCcceEEEE--ECCCCCe-EEee-eeeccCC
Q psy5522 84 NFYNSTGLV-YVHKSYSVFIQLDKAIY--KPGDLVRFRAIVLNSHLKPSVTGALEIFI--TDGKGNR-IKQW-TRALTTR 156 (1397)
Q Consensus 84 ~f~~~~~v~-~~~~~~~vfIqTDKpIY--kPGqtV~fRvv~ld~~l~P~~~~~~~v~I--~DP~g~~-I~qw-~~~~~~~ 156 (1397)
.+..+-.|. +...+..+-+..+|..| .||+++.+.+-+.--..+|+ .+.+.+.+ .+.++.. +.++ .......
T Consensus 187 ~~~~~F~Veeyv~P~feV~~~~~~~~~~~~~~~~~~~~v~a~y~~G~Pv-~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~ 265 (627)
T 3hrz_A 187 NYTAYFDVRKYVLPSFEVRLQPSEKFFYIDGNENFHVSITARYLYGEEV-EGVAFVLFGVKIDDAKKSIPDSLTRIPIID 265 (627)
T ss_dssp CEEEEEEECCCCCCSEEEEEEESSSEEETTCCCCEEEEEEEEETTSCBC-CEEEEEEEEEEETTEEEECGGGCEEEEEBT
T ss_pred EEEEEEEEeEEECCcEEEEEecCcceEEecCCCEEEEEEEEEECCCCEe-ccEEEEEEEEccCCceeeccchheeEEecC
Confidence 333332222 45567778888888876 67999999999988888997 44455544 3221111 1111 1112234
Q ss_pred ceeeeeeecC---------CCCCCeeEEEEEEEc--C-----eEEEEEEEEeeecCCcEEEEEeCCCceEeeCCeEEEEE
Q psy5522 157 GVFSADLQLS---------KSPVLGDWNITINVL--D-----QKFTKRFTVAEYVLPKFEVNVNVPPHATFKDSKVVISV 220 (1397)
Q Consensus 157 Gi~~~sf~L~---------~~~~lG~y~I~v~~~--~-----~~~~~~F~VeEYvLPkFeV~v~~p~~i~~~~~~~~v~v 220 (1397)
|....+|.+. ....-....|.|..- . ........+ +.-.+.+.+......+..|-.+.+++
T Consensus 266 G~g~~~l~~~~~~~~~~~~~~~~~~~l~v~a~V~~e~gt~~~~~~~~~i~i---~~~~~~i~f~~~~~~~kpG~p~~~~v 342 (627)
T 3hrz_A 266 GDGKATLKRDTFRSRFPNLNELVGHTLYASVTVMTESGSDMVVTEQSGIHI---VASPYQIHFTKTPKYFKPGMPYELTV 342 (627)
T ss_dssp TEEEEEECHHHHHHHCCCGGGGTTCEEEEEEEEEETTSSCEEEEEEEEEEE---ESSSCEEECTTSCSEECTTSCEEEEE
T ss_pred CeEEEEEEHHHhhhhhcchhhhcCcEEEEEEEEEEecCCeEEEcccceEEE---EeecEEEEEEeccccccCCCcEEEEE
Confidence 4433333332 111123455555542 1 122233333 34456777765555667899999999
Q ss_pred EEEEecCccccceEEEEEEeccccCccccccccceeEEeecCceEEEEEechhhhccccccceEEEEEEEEEECCc--ce
Q psy5522 221 NAKYTYGKPVKGEATITAYPTIFSGVIQPLFQTPVRKVVPIDGKTVIEFDVVKELQLTDEYERNIHFDVAVEEALT--GR 298 (1397)
Q Consensus 221 ~AkYtyGkPV~G~v~v~v~~~~~~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~~~~~~~~l~V~a~VtE~gT--G~ 298 (1397)
.+.+..|.|++|. .+.++. + ....++|.+|.+.|.|+++. . ...+.|+|+..+.+- +.
T Consensus 343 ~v~~~dg~P~~~~-~V~v~~----~--------~~~~~td~~G~a~f~i~t~~-~------~~~l~i~~~~~~~~~~~~~ 402 (627)
T 3hrz_A 343 YVTNPDGSPAAHV-PVVSEA----F--------HSMGTTLSDGTAKLILNIPL-N------AQSLPITVRTNHGDLPRER 402 (627)
T ss_dssp EEECTTSCBCTTC-EEEEGG----G--------TEEEECCTTSEEEEEECCCT-T------CSEEEEEEEECCTTSCGGG
T ss_pred EEECCCCCcCCCc-eEEEEc----C--------cceeEECCCCeEEEEEECCC-C------CcEEEEEEEeCCCCCCccc
Confidence 9999999999984 233321 0 24567899999999998865 1 136777777544321 11
Q ss_pred EEeeEEEEEEEE----eeeEEEEEecCCcccCCCeEEEEEEEEccC--CCccCCCCceEE-EEEeeeccccccceee--E
Q psy5522 299 RQNNTGSVVFHK----HKYKMDLIKSSEYFKPGLKYTAYMKLTHHD--GTPVTDNNNMVQ-VRHGFSYDESKYEANQ--Y 369 (1397)
Q Consensus 299 ~~~~~~~i~i~~----~~~~i~f~~~~~~~kpG~p~~~~v~v~~~d--G~P~~~~~~~V~-v~~~~~~~~~~~~~~~--~ 369 (1397)
...++..+.... +.-.|.+.....-+++|.++.+.+.+.... ..++. .+. +.+.. +..... .
T Consensus 403 ~~~~~~~~~~y~s~~~s~syL~i~~~~~~l~~G~~~~v~v~~~~~~~~~~~~~----~f~YlV~sr-----G~Iv~~g~~ 473 (627)
T 3hrz_A 403 QATKSMTAIAYQTQGGSGNYLHVAITSTEIKPGDNLPVNFNVKGNANSLKQIK----YFTYLILNK-----GKIFKVGRQ 473 (627)
T ss_dssp SCEEEEEEEECCCGGGCCCEEEEEECCCSCCTTCEEEEEEEEESCHHHHHTCC----EEEEEEEET-----TEEEEEEEE
T ss_pred ccccEEEEEEeeCCCCCCceEEEecCCCccCCCCEEEEEEEEecCCCCccccc----EEEEEEEEC-----CcEEEEeEE
Confidence 112222221111 223455555566799999988887554211 12221 121 11111 111111 1
Q ss_pred -eeCCCeeEEEEEeCCCCCceeEEEEEEEec--Ccce--E--EEEEEeecCCCCCeEEEEecCCCCCCCCeEEEEEEecC
Q psy5522 370 -KLDRNGMIKLVYYPPANENVTTLGIEAEYL--DIKE--W--FSTISASESPSNSFIQAALLTQNPKVNKDVELEINSTA 442 (1397)
Q Consensus 370 -ttd~~G~~~f~i~~~~~~~~~~l~l~a~~~--~~~~--~--~~~v~~~~S~s~s~L~i~~~~~~~~~G~~~~v~v~s~~ 442 (1397)
....+|..+|+|....+. .+..+|-|.|- +++- + .+.+.. .-..-+.|..++.++.||+.+.++|.+.
T Consensus 474 ~~~~~~~~~s~~l~vt~~m-aP~arllvYyi~~~gEvVaDS~~~~Ve~---~c~~~v~l~~s~~~~~Pg~~v~L~v~a~- 548 (627)
T 3hrz_A 474 PRRDGQNLVTMNLHITPDL-IPSFRFVAYYQVGNNEIVADSVWVDVKD---TCMGTLVVKGDNLIQMPGAAMKIKLEGD- 548 (627)
T ss_dssp ECCTTCSEEEEEEECCGGG-CSEEEEEEEEEETTTEEEEEEEEEECCC---CCSSCEEEECCCCCBCTTCEEEEEEEES-
T ss_pred EecCCccEEEEEEECCccc-CccEEEEEEEEeCCCCEEEEEEEEEehh---cccceEEEecCccccCCCCeEEEEEEeC-
Confidence 123458888888876443 35577877764 2321 1 111211 0012388887788899999999999954
Q ss_pred CcceEEEEEE
Q psy5522 443 PLKYISYQVL 452 (1397)
Q Consensus 443 ~~~~~~ylV~ 452 (1397)
+........+
T Consensus 549 p~S~vgL~aV 558 (627)
T 3hrz_A 549 PGARVGLVAV 558 (627)
T ss_dssp TTCEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 4443444443
No 33
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=98.23 E-value=0.0014 Score=83.72 Aligned_cols=419 Identities=11% Similarity=0.090 Sum_probs=219.5
Q ss_pred eeecCCeEEEEEEeecCC---ccEEEEEEEEeecCCCCeeEEeEEEEECCCceeEEEEEcCCC-CCceeEEEEEecCce-
Q psy5522 9 VLRPNGEYHVAVSTQAVS---EATQVSVEVGGKQDSGGEFRTKQLLSVDPFSTRIVKLDIGDL-GPGQYNLTVKGSGSL- 83 (1397)
Q Consensus 9 ~lr~g~~~~v~v~l~~~~---~~v~v~v~L~~~~~~~~~~~~~~~~~~~~~~~~~~~f~vP~~-~~~~~~l~v~g~~~~- 83 (1397)
+-|||.+-++-+-+.+.+ ..-.+++.|..+ + | +......+ .........+|++|.. ..|.|++.++..++.
T Consensus 130 iYrPGqtV~~r~i~~d~~~~p~~~~~~v~i~dp-~-g-~~v~~~~~-~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~~~~~ 205 (656)
T 4fxk_A 130 IYNPGQRVRYRVFALDQKMRPSTDTITVMVENS-H-G-LRVRKKEV-YMPSSIFQDDFVIPDISEPGTWKISARFSDGLE 205 (656)
T ss_dssp EECTTCEEEEEEEEECSSSSBCCCCEEEEEECT-T-C-CEEEEEEE-CCTTSEEEEEEECCTTCCSEEEEEEEEESSCTT
T ss_pred CcCCCCEEEEEEEEECCccCcCcccceEEEECC-C-C-cEEeeeEE-ecCCceEEEEecCCCCCCCcCEEEEEEEcCCCc
Confidence 358888877766555422 112445666654 2 3 22222222 2233445678999954 568899999864332
Q ss_pred -eeEeeEEEE-EEecccEEEEEcCCCccc----CCceeEEEEEEEcCCCccCCC-cceEEEEECCCCCeEEe---eeeec
Q psy5522 84 -NFYNSTGLV-YVHKSYSVFIQLDKAIYK----PGDLVRFRAIVLNSHLKPSVT-GALEIFITDGKGNRIKQ---WTRAL 153 (1397)
Q Consensus 84 -~f~~~~~v~-~~~~~~~vfIqTDKpIYk----PGqtV~fRvv~ld~~l~P~~~-~~~~v~I~DP~g~~I~q---w~~~~ 153 (1397)
.+..+-.|. +...+..+-|..+|+.|. +|+++.+.+-+.-...+|+.+ ..+.+.+.++.+..-.. .....
T Consensus 206 ~~~s~~F~VeeyvlP~feV~i~~~~~~~~~~~~~~~~~~v~v~a~Y~~G~PV~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 285 (656)
T 4fxk_A 206 SNSSTQFEVKKYVLPNFEVKITPGKPYILTVPGHLDEMQLDIQARYIYGKPVQGVAYVRFGLLDEDGKKTFFRGLESQTK 285 (656)
T ss_dssp CCCCEEEEECCCCCCSEEEEEEESSSSCCEETTEECCCEEEEEEEETTCCCCCSEEEEEEEECCTTSCCEEEEEEEEEEE
T ss_pred eeEEEEEEEEEEecCcEEEEEecCcceeeeccCCCCeEEEEEEEEEccCccEeeEEEEEEEEecCCCCccccccccccEE
Confidence 222222222 445677888899998775 589999998888877889733 24445555555443221 11233
Q ss_pred cCCceeeeeeecC-------------CCCCCeeEEEEEEEcC----eEEEEEEEEeeecCCcEEEEEeCCCceEeeCCeE
Q psy5522 154 TTRGVFSADLQLS-------------KSPVLGDWNITINVLD----QKFTKRFTVAEYVLPKFEVNVNVPPHATFKDSKV 216 (1397)
Q Consensus 154 ~~~Gi~~~sf~L~-------------~~~~lG~y~I~v~~~~----~~~~~~F~VeEYvLPkFeV~v~~p~~i~~~~~~~ 216 (1397)
...|....++.+. ....-....|.+.... ........--.+....+.+.+......+..+..+
T Consensus 286 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~a~V~e~~g~~~~~~~~~~i~~~~~~~~i~~~~~~~~~kpg~p~ 365 (656)
T 4fxk_A 286 LVNGQSHISLSKAEFQDALEKLNMGITDLQGLRLYVAAAIIESPGGEMEEAELTSWYFVSSPFSLDLSKTKRHLVPGAPF 365 (656)
T ss_dssp CSSSEEEEECCHHHHHHHHHHTSCCSSTTTTTCEECEEEEECCSSSCCCEEECCCEECCSSSSEEECCSSCSCCCTTSBC
T ss_pred eecCEEEEEECHHHhhhhhcccccccccccCceEEEEEEEEECCCCeEEEEEEEEEEEecccEEEEEeccCCeEcCCCcE
Confidence 4567666665432 1222234566665532 1111111111233445566655444455678889
Q ss_pred EEEEEEEEecCccccce-EEEEEEeccccCccccccccceeEEeecCceEEEEEechhhhccccccceEEEEEEEEEECC
Q psy5522 217 VISVNAKYTYGKPVKGE-ATITAYPTIFSGVIQPLFQTPVRKVVPIDGKTVIEFDVVKELQLTDEYERNIHFDVAVEEAL 295 (1397)
Q Consensus 217 ~v~v~AkYtyGkPV~G~-v~v~v~~~~~~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~~~~~~~~l~V~a~VtE~g 295 (1397)
.+++.+.+.-|+|++|. +.+++....+..... ...+...++.+|.+.+.+.++. + ...+.+++.- ..
T Consensus 366 ~~~v~v~~~dG~P~~~~~v~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~------~-~~~~~~~v~~--~~ 433 (656)
T 4fxk_A 366 LLQALVREMSGSPASGIPVKVSATVSSPGSVPE---VQDIQQNTDGSGQVSIPIIIPQ------T-ISELQLSVSA--GS 433 (656)
T ss_dssp CEEEEEECSSSSCCCSCCEEEEEEEECGGGCEE---EEEEEECCCTTSEEEECCBCCT------T-CSEEEEEEEE--SS
T ss_pred EEEEEEECCCCCCCCCceEEEEEEEeccceEEe---eeEEEEEecCCceEEEEEeCCC------C-CcEEEEEEEe--CC
Confidence 99999999999999984 666665443221110 1223445677777777665543 1 1345555442 22
Q ss_pred cceEEeeEEEEE--EEEeeeEEEEEe-cCCcccCCCeEEEEEEEEccCCCccCCCCceEEEEEeeeccccccceeeEeeC
Q psy5522 296 TGRRQNNTGSVV--FHKHKYKMDLIK-SSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYDESKYEANQYKLD 372 (1397)
Q Consensus 296 TG~~~~~~~~i~--i~~~~~~i~f~~-~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd 372 (1397)
+....+...+. .+.+.-.+.... ....|++|....+.|.... .|.++. .+...+.. ++.........
T Consensus 434 -~~~~~~~~~~~~~~s~s~~~l~i~~~d~~~~~~Ge~~~v~v~~~~-~~~~~~----~~~y~v~s----~g~I~~~~~~~ 503 (656)
T 4fxk_A 434 -PHPAIARLTVAAPPSGGPGFLSIERPDSRPPRVGDTLNLNLRAVG-SGATFS----HYYYMILS----RGQIVFMNREP 503 (656)
T ss_dssp -SSCEEEEEEEECCCSSCSCEEEEECSCCSCCCTTCEEEEEEEEES-SCCCCC----CEEEEEEE----TTEEEEEEEEC
T ss_pred -cccEEEEEEEEccCCCCCCeEEEEecccCCccCCCeEEEEEEecC-CCCcee----EEEEEEec----CCcEEEEEEEe
Confidence 22222211111 112222344433 3467999998888876643 344443 12211110 11222223345
Q ss_pred CCeeEEEEEeCCCCCceeEEEEEEEecCcceEEEE-EE-eec-CCCCCeEEEEec-CCCCCCCCeEEEEEEecCCcceEE
Q psy5522 373 RNGMIKLVYYPPANENVTTLGIEAEYLDIKEWFST-IS-ASE-SPSNSFIQAALL-TQNPKVNKDVELEINSTAPLKYIS 448 (1397)
Q Consensus 373 ~~G~~~f~i~~~~~~~~~~l~l~a~~~~~~~~~~~-v~-~~~-S~s~s~L~i~~~-~~~~~~G~~~~v~v~s~~~~~~~~ 448 (1397)
.+|...++|....++ ....+|.|.+-........ +. ... .....-|.|..+ .++++||++++|.|.+.. .....
T Consensus 504 ~~~~~~i~l~vt~~~-~P~~~v~v~~v~~~~~v~ds~~~~v~~~~~~~~l~v~~~~~~~~~Pg~~v~l~v~a~p-~s~V~ 581 (656)
T 4fxk_A 504 KRTLTSVSVFVDHHL-APSFYFVAFYYHGDHPVANSLRVDVQAGACEGKLELSVDGAKQYRNGESVKLHLETDS-LALVA 581 (656)
T ss_dssp CCSSCEEEEECCGGG-CSCEEEEEEECSTTCCEEECCEECCCSCCCSSCEEEEEECCCEETTEEEEEEEEEESS-EEEEE
T ss_pred cCCcEEEEEEcChhc-CCcEEEEEEEEECCcEEeeeEEEEeecCccCcEEEEEeCCccccCCCCEEEEEEEeCC-CCEEE
Confidence 567777888766544 2335666665433211111 00 011 122345666654 456899999999998653 33333
Q ss_pred EEEEeCC
Q psy5522 449 YQVLGRG 455 (1397)
Q Consensus 449 ylV~srG 455 (1397)
..++.+|
T Consensus 582 L~aVD~~ 588 (656)
T 4fxk_A 582 LGALDTA 588 (656)
T ss_dssp CEEEESS
T ss_pred EEEEEhh
Confidence 4444333
No 34
>1hzf_A Complement factor C4A; alpha-alpha 6 barrel, immune system; 2.30A {Homo sapiens} SCOP: a.102.4.4
Probab=97.92 E-value=6.7e-06 Score=97.34 Aligned_cols=52 Identities=17% Similarity=0.142 Sum_probs=44.9
Q ss_pred CcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchHh---HHHhhcC
Q psy5522 957 STWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGKV---SHADMQG 1012 (1397)
Q Consensus 957 s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqdv---l~al~~~ 1012 (1397)
++++|||||++|+.+.+ |...+.++++||.+||+.+|+|.||||. |+||++.
T Consensus 305 ~vE~TAyaLLall~~~~----~~~~~~~iv~WL~~qrn~~Ggw~sTqdTvvAL~AL~~y 359 (367)
T 1hzf_A 305 WIETTAYALLHLLLHEG----KAEMADQASAWLTRQGSFQGGFRSTQDTVIALDALSAY 359 (367)
T ss_dssp HHHHHHHHHHHHHHHTC----SSHHHHHHHHHHHHHTTSTTCSCSHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhccC----chhhhHHHHHHHHhCcCCCCCcccHHHHHHHHHHHHHH
Confidence 68999999999997643 3477899999999999999999999983 8998873
No 35
>3dss_B Geranylgeranyl transferase type-2 subunit beta; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1ltx_B* 3c72_B* 1dce_B 3dst_B* 3dsu_B* 3dsv_B* 3dsw_B* 3dsx_B* 3hxb_B* 3hxc_B* 3hxd_B* 3hxe_B* 3hxf_B* 3pz1_B* 3pz2_B* 3pz3_B* 4ehm_B* 4gts_B* 4gtt_B* 4gtv_B*
Probab=97.74 E-value=0.0003 Score=81.47 Aligned_cols=101 Identities=16% Similarity=0.104 Sum_probs=71.2
Q ss_pred CCCchhhhhcccchHHHHHHHHHHhccccHHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCCcchhHHHHHHHH
Q psy5522 890 PFGCGEQNMLNFVPNIVVLEYLKKTYQLTDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFR 969 (1397)
Q Consensus 890 P~GCgEQ~m~~~~p~i~~l~yL~~~~~l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl~~~~ 969 (1397)
|++..-.--+++.-.-+++.-|.--+.+....+++++++|.+ .|++||+|+.+.+. .+++..|.+++.++.
T Consensus 36 ~~~~~~~d~~r~~~~yw~l~~L~lLg~l~~~~r~~~i~~l~s-------~Q~~dGGF~g~~g~--~~~l~~Ty~Al~~L~ 106 (331)
T 3dss_B 36 DYEYCMSEYLRMSGVYWGLTVMDLMGQLHRMNKEEILVFIKS-------CQHECGGVSASIGH--DPHLLYTLSAVQILT 106 (331)
T ss_dssp GGGSGGGGGGHHHHHHHHHHHHHHTTCGGGSCHHHHHHHHHH-------TBCTTSCBBSSTTS--CBCHHHHHHHHHHHH
T ss_pred CccceeccccHHHHHHHHHHHHHHhCCCchhhHHHHHHHHhh-------hcCCCCCcCCCCCC--CccHHHHHHHHHHHH
Confidence 444433333354444456665665566655557788888875 46899999876543 568899999999998
Q ss_pred HccCCCccCHHHHHHHHHHHHhcccCCCccccc
Q psy5522 970 QAASHTTIDESVILEALAWLSSNQAVNGSFPEV 1002 (1397)
Q Consensus 970 ~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~st 1002 (1397)
....+-.|| .+++++||.+.|+++|+|...
T Consensus 107 ~l~~~~~id---~~k~~~fL~~~Q~~DGsf~~~ 136 (331)
T 3dss_B 107 LYDSIHVIN---VDKVVAYVQSLQKEDGSFAGD 136 (331)
T ss_dssp HTTCGGGSC---HHHHHHHHHHTBCTTSCBBSS
T ss_pred HcCCccHHH---HHHHHHHHhccCCCCCCEecc
Confidence 877543333 678899999999999999853
No 36
>1qqf_A Protein (complement C3DG); alpha-alpha barrel, immune system; 1.45A {Rattus norvegicus} SCOP: a.102.4.4 PDB: 1qsj_A 3d5r_A 2noj_A 2gox_A 3d5s_A 1c3d_A 2xqw_A
Probab=97.62 E-value=3.3e-05 Score=87.80 Aligned_cols=50 Identities=12% Similarity=0.184 Sum_probs=44.1
Q ss_pred CcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchHh---HHHhhc
Q psy5522 957 STWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGKV---SHADMQ 1011 (1397)
Q Consensus 957 s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqdv---l~al~~ 1011 (1397)
.++.|||+|++++.+++. ..+.++++||.+||+++|+|.||||. |+||++
T Consensus 220 ~ve~Ta~aLlal~~~~~~-----~~~~~~v~wL~~qq~~~Ggw~sTq~T~~aL~AL~~ 272 (277)
T 1qqf_A 220 NVEATSYALLALLLLKDF-----DSVPPVVRWLNDERYYGGGYGSTQATFMVFQALAQ 272 (277)
T ss_dssp HHHHHHHHHHHHHHTTCT-----TSHHHHHHHHHHCCCCTTSTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhcCCh-----hhHHHHHHHHHHccCCCCCeecchHHHHHHHHHHH
Confidence 678999999999998753 56888999999999999999999983 888876
No 37
>2wy7_A Complement C3D fragment; immune system, immune response, innate immunity, complement inflammatory response; 1.70A {Homo sapiens} PDB: 2wy8_A 3oed_A 3oxu_A 3rj3_A 1ghq_A* 1w2s_A
Probab=97.60 E-value=3.9e-05 Score=88.63 Aligned_cols=51 Identities=14% Similarity=0.186 Sum_probs=44.7
Q ss_pred CcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchHh---HHHhhcC
Q psy5522 957 STWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGKV---SHADMQG 1012 (1397)
Q Consensus 957 s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqdv---l~al~~~ 1012 (1397)
.++.|||+|++++.+++. ..+.++++||.+||+++|+|.||||. |+||++.
T Consensus 236 ~ve~Ta~aLlal~~~~~~-----~~~~~~v~wL~~qq~~~Ggw~sTq~T~~aL~AL~~y 289 (310)
T 2wy7_A 236 NVEATSYALLALLQLKDF-----DFVPPVVRWLNEQRYYGGGYGSTQATFMVFQALAQY 289 (310)
T ss_dssp HHHHHHHHHHHHHHHTCT-----TTHHHHHHHHHHTTCCCCSTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhcCCh-----hhHHHHHHHHHHccCCCCCeeccHHHHHHHHHHHHH
Confidence 678999999999998753 56889999999999999999999973 8888873
No 38
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=97.54 E-value=0.014 Score=71.19 Aligned_cols=250 Identities=14% Similarity=0.063 Sum_probs=150.1
Q ss_pred CceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcCeEEEEEEEE
Q psy5522 112 GDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLDQKFTKRFTV 191 (1397)
Q Consensus 112 GqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~~~~~~~F~V 191 (1397)
.+...+++.++|.+-.|+.+..+.+. -+.|..+......++..|.+...+. + ...|.++|.+..++...+....+
T Consensus 25 ~~~~~ltatV~D~~Gnpv~g~~Vtf~--~~~g~~~~~~t~~Td~~G~a~~tlt-s--t~aG~~~VtAt~~g~s~s~~v~f 99 (492)
T 1cwv_A 25 KTAITVEFTVADFEGKPLAGQEVVIT--TNNGALPNKITEKTDANGVARIALT-N--TTDGVTVVTAEVEGQRQSVDTHF 99 (492)
T ss_dssp SSCEEEEEEEECTTSCBCCSCEEEEE--CCTTCBSCEEEEECCTTSEEEEEEB-C--SSCEEEEEEEEETTEEEEEEEEE
T ss_pred CceEEEEEEEEcCCCCCCCCCEEEEE--ECCCccccccceeeCCCceEEEEEE-c--CcceEEEEEEEECCccceeEEEE
Confidence 34678888899999999877766654 4566655444557789999998875 3 35799999999987332222221
Q ss_pred ee--ecCCcEEEEEeCCCceEeeC-CeEEEEEEEEEecCccccce-EEEEEEeccccCccccccccce-eEEeecCceEE
Q psy5522 192 AE--YVLPKFEVNVNVPPHATFKD-SKVVISVNAKYTYGKPVKGE-ATITAYPTIFSGVIQPLFQTPV-RKVVPIDGKTV 266 (1397)
Q Consensus 192 eE--YvLPkFeV~v~~p~~i~~~~-~~~~v~v~AkYtyGkPV~G~-v~v~v~~~~~~g~~~~~~~~~~-~~~~d~~G~~~ 266 (1397)
.. -......+.+. |..+...+ +...+++..+=-+|.||+|. |++.... | .+ ..+++.+|.++
T Consensus 100 ~a~~~~a~~s~l~~~-~~~~~A~g~~~~tltatv~Da~GNpv~g~~Vtf~~~~----g--------~~~~~Ttd~~G~at 166 (492)
T 1cwv_A 100 VKGTIAADKSTLAAV-PTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTL----G--------NMGVITDHNDGTYS 166 (492)
T ss_dssp ECCCBCGGGCEEEEE-SSEEETTSSCCEEEEEECBBTTSCBCCSCCEEEEESS----S--------EECCCEECSSSEEE
T ss_pred eeccCcccceeEEEe-ccceecCCceeEEEEEEEEcCCCCCcCCcEEEEEECC----C--------ceeeeEecCCcEEE
Confidence 11 00112334443 23333332 56888888888899999994 5555311 1 11 23557899999
Q ss_pred EEEechhhhccccccceEEEEEEEEEECCcceEEe-eEEEEEEEEee----eEEEEEecCCccc--CCCeEEEEEEEEcc
Q psy5522 267 IEFDVVKELQLTDEYERNIHFDVAVEEALTGRRQN-NTGSVVFHKHK----YKMDLIKSSEYFK--PGLKYTAYMKLTHH 339 (1397)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~l~V~a~VtE~gTG~~~~-~~~~i~i~~~~----~~i~f~~~~~~~k--pG~p~~~~v~v~~~ 339 (1397)
+.+.... ...+.|.|++ .|.... .+..+.+.... -...+.-.+.... -+....+++.++|.
T Consensus 167 ~tlts~~--------aG~~tVtA~v----~g~~~~~~s~~vtf~a~~~~~~~~~~l~v~~~~~~A~g~~~~tltatv~D~ 234 (492)
T 1cwv_A 167 APLTSTT--------LGVATVTVKV----DGAAFSVPSVTVNFTADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDK 234 (492)
T ss_dssp EEEECSS--------CEEEEEEEEE----TTEEEEEEEEEEEEECCSSCCTTTCEEEESCSEEETTSCCCEEEEEECBCT
T ss_pred EEEEccC--------ceEEEEEEEE----CCccccccceEEEEEccCccccceeeEeecccceeeCCcceEEEEEEEECC
Confidence 9887532 3467888877 244332 23444444321 0111222222222 24578999999999
Q ss_pred CCCccCCCCceEEEEEeeeccccccceeeEeeCCCeeEEEEEeCCCCCceeEEEEEEEecC
Q psy5522 340 DGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGMIKLVYYPPANENVTTLGIEAEYLD 400 (1397)
Q Consensus 340 dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~a~~~~ 400 (1397)
+|+|+++.. .|.+..... ....+-.++++|.+..++.-. ..+. +.|.|....
T Consensus 235 ~GNpv~g~~-~V~f~~~G~-----~v~~s~~T~~~G~~t~t~t~~-~aG~--~tVtA~~~g 286 (492)
T 1cwv_A 235 NGHFISGMQ-GLSFTQNGV-----PVSISPITEQPDSYTATVVGN-SVGD--VTITPQVDT 286 (492)
T ss_dssp TSCBCCSCC-SEEEEEEES-----CCEECCCEECSSCEEEEEECS-SCEE--EEEEEEETT
T ss_pred CCCCccCCc-eEEEecCCc-----eeeeeeEecCCceEEEEEEcC-cceE--EEEEEEECC
Confidence 999999652 155443211 111223478899999988754 3444 677776654
No 39
>2h6f_B Protein farnesyltransferase beta subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.102.4.3 PDB: 1jcq_B* 1ld7_B* 1mzc_B* 1s63_B* 1sa4_B* 1tn6_B* 2f0y_B* 1ld8_B* 2iej_B* 3e37_B* 2h6h_B* 2h6g_B* 2h6i_B* 1o1t_B* 1o1s_B* 1o1r_B* 3eu5_B* 3pz4_B* 3e33_B* 1d8e_B* ...
Probab=97.52 E-value=0.00031 Score=84.14 Aligned_cols=83 Identities=17% Similarity=0.160 Sum_probs=60.4
Q ss_pred HHHhc-cccHHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCCcchhHHHHHHHHHccCCCccCHHHHHHHHHHH
Q psy5522 911 LKKTY-QLTDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFRQAASHTTIDESVILEALAWL 989 (1397)
Q Consensus 911 L~~~~-~l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL 989 (1397)
|.--+ .++++.+++++++|.. .|++||||+.+... ...+..|.+|+.+|...+.....+...+.++++||
T Consensus 111 L~lLg~~~~~~~~~r~v~~l~s-------~Q~~dGGf~g~~~~--~~~i~~T~~Al~aL~~lg~~~~~~~i~i~kav~~L 181 (437)
T 2h6f_B 111 LELLDEPIPQIVATDVCQFLEL-------CQSPEGGFGGGPGQ--YPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYL 181 (437)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHH-------HBCTTSSBBSSTTC--CBCHHHHHHHHHHHHHHCCHHHHTTSCHHHHHHHH
T ss_pred HHHhCCCCCHHHHHHHHHHHHH-------hCCCCCCcCCccCC--CcchhHHHHHHHHHHHhCCcccccchHHHHHHHHH
Confidence 44444 3466677788887764 68899999876432 46789999999999877642111222378899999
Q ss_pred HhcccCCCccccc
Q psy5522 990 SSNQAVNGSFPEV 1002 (1397)
Q Consensus 990 ~~~q~~~G~F~st 1002 (1397)
.+.|++||||...
T Consensus 182 ~s~Q~~DGsf~~~ 194 (437)
T 2h6f_B 182 YSLKQPDGSFLMH 194 (437)
T ss_dssp HTTBCTTSCBBSS
T ss_pred HHhCCCCCCeeec
Confidence 9999999999864
No 40
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=97.05 E-value=0.026 Score=64.86 Aligned_cols=249 Identities=12% Similarity=0.095 Sum_probs=143.6
Q ss_pred CCceeEEEEEEEcCCCccC--CCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcCeEE---
Q psy5522 111 PGDLVRFRAIVLNSHLKPS--VTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLDQKF--- 185 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~--~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~~~~--- 185 (1397)
.|+...|.|.++|.+-.|. ....+.|.|..|....+ .......|.+..+|. |.+ .|.|+|.+..++...
T Consensus 20 ~g~~~~F~v~~~da~G~~~~~g~~~~~v~i~gp~~~~~---~~~d~~dG~y~v~y~-p~~--~G~~~i~v~~~~~~i~gs 93 (311)
T 1wlh_A 20 CFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGPAPVDP---VMVDNGDGTYDVEFE-PKE--AGDYVINLTLDGDNVNGF 93 (311)
T ss_dssp TTSCEEEEEECCSSSCC---CCCCCEEEEEESSSCCCC---BCCCCSSSEEEEEEC-CCS--CSEEEEEEEESSSBCTTC
T ss_pred cCCCEEEEEEEecCCCCEeccCCCeEEEEEECCCccEE---EEEECCCCEEEEEEE-ccC--ccceEEEEEECCEECCCC
Confidence 6899999999999877765 34678899999875433 223467899999996 655 499999999987211
Q ss_pred EEEEEEeeecCCcEEEEEeCCC-ceEeeCCeEEEEEEEEEecCcccc-c--eEEEEEEeccccCccccccccceeEEeec
Q psy5522 186 TKRFTVAEYVLPKFEVNVNVPP-HATFKDSKVVISVNAKYTYGKPVK-G--EATITAYPTIFSGVIQPLFQTPVRKVVPI 261 (1397)
Q Consensus 186 ~~~F~VeEYvLPkFeV~v~~p~-~i~~~~~~~~v~v~AkYtyGkPV~-G--~v~v~v~~~~~~g~~~~~~~~~~~~~~d~ 261 (1397)
-..+.|...+-|. .+.+.-+. .-...++...+.|.++-.+|.|.. | .+++++... .|. .....-+-..
T Consensus 94 Pf~~~v~~~~d~~-~~~~~G~gl~~~~~g~~~~f~V~~~D~~G~~~~~g~~~~~v~i~~p--~g~-----~~~~~v~d~~ 165 (311)
T 1wlh_A 94 PKTVTVKPAPSAE-HSYAEGEGLVKVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGP--DGL-----VVDAKVTDNN 165 (311)
T ss_dssp SEEEEEECCBCTT-TCCEESGGGTCEESSSCEEEEEECBBSSSSBCSSCCCCEEEEEECT--TSC-----BCCCEEEEET
T ss_pred ceEEEEccccccc-eeEEeccccceeecCCCEEEEEEecCCCCCEEecCCCcEEEEEECC--CCC-----eeeEEEEECC
Confidence 1112222222111 01111110 112346778999999999999985 3 455555321 111 0112233456
Q ss_pred CceEEEEEechhhhccccccceEEEEEEEEEECCcceEEeeEEEEEEEEeeeEEEEEe--cCCcccCCCeEEEEEEEEcc
Q psy5522 262 DGKTVIEFDVVKELQLTDEYERNIHFDVAVEEALTGRRQNNTGSVVFHKHKYKMDLIK--SSEYFKPGLKYTAYMKLTHH 339 (1397)
Q Consensus 262 ~G~~~~~~~~~~~~~~~~~~~~~l~V~a~VtE~gTG~~~~~~~~i~i~~~~~~i~f~~--~~~~~kpG~p~~~~v~v~~~ 339 (1397)
||...+.+.... ...+.|.+++ + |+. |..+|+.+.+.. .+...+. .+..+.|.+.|.
T Consensus 166 dGty~v~y~p~~--------~G~y~i~V~~---~-g~~--------I~gSPF~v~V~~~~d~~~v~~-~~~~f~V~~~D~ 224 (311)
T 1wlh_A 166 DGTYGVVYDAPV--------EGNYNVNVTL---R-GNP--------IKNMPIDVKCIEGANGEDSSF-GSFTFTVAAKNK 224 (311)
T ss_dssp TTEEEEEECCCS--------SEEEEEEEEE---T-TEE--------CTTCSCEEEEECCCCGGGCEE-EEEEEEEECBCT
T ss_pred CCEEEEEEECCC--------CEEEEEEEEE---C-CEE--------CCCCCEEEEECCCCCCCceEE-EeEEEEEEEecc
Confidence 788888877644 2355666665 1 433 334556655543 1222222 566777888899
Q ss_pred CCCccCCCCceEEEEEeeeccccccceeeEeeCCCeeEEEEEeCCCCCceeEEEEEEEecC
Q psy5522 340 DGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGMIKLVYYPPANENVTTLGIEAEYLD 400 (1397)
Q Consensus 340 dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~a~~~~ 400 (1397)
.|.|+......+.+.+... .. ......+.+.+|...+++.+. ..+. +.|.+++.+
T Consensus 225 ~gn~~~~G~~~l~v~i~~p--~g-~~~~~v~d~~~G~y~v~y~p~-~~G~--y~i~V~~~g 279 (311)
T 1wlh_A 225 KGEVKTYGGDKFEVSITGP--AE-EITLDAIDNQDGTYTAAYSLV-GNGR--FSTGVKLNG 279 (311)
T ss_dssp TSSBCSSCCSCEEEEEESC--CS-EEEEEEEECSSSEEEEEEEEE-CSEE--EEEEEEETT
T ss_pred CCCeeecCCCcEEEEEECC--CC-CceeEEEECCCCEEEEEEECC-CCEe--EEEEEEECC
Confidence 9999852234566654311 11 222344567889888887765 4456 455555654
No 41
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=96.96 E-value=0.05 Score=64.94 Aligned_cols=271 Identities=14% Similarity=0.105 Sum_probs=162.4
Q ss_pred EEEcCCCcccCCceeEEEEEEEcCCCccCCCcceEEEEECCC---CCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEE
Q psy5522 101 FIQLDKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGK---GNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNIT 177 (1397)
Q Consensus 101 fIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~---g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~ 177 (1397)
.+..++.-...+.+..+.+.+.|.+-.|+.+..+.+...++. +.....| .....|.+..+|.++.. .|.|.|.
T Consensus 95 ~l~~~~~~~~A~g~~t~t~~v~Da~gnpv~g~~V~~~~~~g~~~~~~t~~~~--t~~~~G~~tatlT~~t~--aG~~~Vt 170 (414)
T 3tkv_A 95 SITLNPDKPVVGGTVTAIWTAKDANDNPVTGLNPDAPSLSGAAAAGSTASGW--TDNGDGTWTAQISLGTT--AGELDVM 170 (414)
T ss_dssp EEEEESSSCBTTSEEEEEEECBCTTCCBCCSCCCCCCEEESGGGTTCEECCC--EECSSSEEEEEEECCSC--CEEEEEE
T ss_pred EEEECCCceecCCEEEEEEEEECCCCCCcCCCEEEEEecCCCcccceeccce--EECCCcEEEEEEEeccc--cccEEEE
Confidence 344445555567766676667788888887777777665543 2334444 34678999999988764 6999999
Q ss_pred EEEcCeEE---EEEEEEeeecC-C-cEEEEEeCCCceEeeCCeEEEEEEEEEecCccccce-EEEEEEeccccCcccccc
Q psy5522 178 INVLDQKF---TKRFTVAEYVL-P-KFEVNVNVPPHATFKDSKVVISVNAKYTYGKPVKGE-ATITAYPTIFSGVIQPLF 251 (1397)
Q Consensus 178 v~~~~~~~---~~~F~VeEYvL-P-kFeV~v~~p~~i~~~~~~~~v~v~AkYtyGkPV~G~-v~v~v~~~~~~g~~~~~~ 251 (1397)
+..++... .....+..=.+ + .-.+.+ .+.-...|+...+++.++--+|.||.|. +.+.+.... .+..
T Consensus 171 a~v~g~~~~~~~~~vtf~a~~~sa~~s~l~~--~~~~~~Ag~~~t~t~~v~Da~GNpv~g~~V~f~~~~~~-----~~~~ 243 (414)
T 3tkv_A 171 PKLNGQDAAANAAKVTVVADALSSNQSKVSV--AEDHVKAGESTTVTLVAKDAHGNAISGLSLSASLTGTA-----SEGA 243 (414)
T ss_dssp CEETTEECSSSCEEEEEBCCSBCTTTCEEEE--SCSEEETTCEEEEEEECBBTTCCBCCSCCEEEEEESGG-----GTTC
T ss_pred EEECCeeccccceeEEEEcCCCcceeeEEEE--cccceecCCEEEEEEEEEcCCCCCcCCCEEEEEEccCC-----CCCc
Confidence 99987321 12222111110 0 112222 2223345688999999999999999994 555543210 0000
Q ss_pred ccce-eEEeecCceEEEEEechhhhccccccceEEEEEEEEEECCcceEEee-EEEEEEEEee---eEEEEEecCCcccC
Q psy5522 252 QTPV-RKVVPIDGKTVIEFDVVKELQLTDEYERNIHFDVAVEEALTGRRQNN-TGSVVFHKHK---YKMDLIKSSEYFKP 326 (1397)
Q Consensus 252 ~~~~-~~~~d~~G~~~~~~~~~~~~~~~~~~~~~l~V~a~VtE~gTG~~~~~-~~~i~i~~~~---~~i~f~~~~~~~kp 326 (1397)
.+ ..+.+.+|.+...+.... ....+.|.|++ .|..+.. ...+.|.... ..+.+...+..+..
T Consensus 244 --t~s~~tt~~~G~~~~t~ta~t-------~aG~~~Vta~v----~g~~~~~~~~~vt~~a~~~~~~~s~l~~~~~~~~a 310 (414)
T 3tkv_A 244 --TVSSWTEKGDGSYVATLTTGG-------KTGELRVMPLF----NGQPAATEAAQLTVIAGEMSSANSTLVADNKTPTV 310 (414)
T ss_dssp --EECCCEEEETTEEEEEEECCS-------CCEEEEEEEEE----TTEECSSSCEEEEEECCSBCTTTCEEEESCSSCBT
T ss_pred --eecceEECCCcEEEEEEEcCc-------ccceEEEEEEE----CCEeccccceEEEEecCCccccceEEEeCCceeec
Confidence 12 235678999999887322 12467788877 2554432 2344444321 12344545556677
Q ss_pred CCeEEEEEEEEccCCCccCCCCceEEEEEeeecc---ccccceeeEeeCCCeeEEEEEeCCCCCceeEEEEEEEec
Q psy5522 327 GLKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYD---ESKYEANQYKLDRNGMIKLVYYPPANENVTTLGIEAEYL 399 (1397)
Q Consensus 327 G~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~---~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~a~~~ 399 (1397)
|....+++.++|.+|+|+++.. |.+.....-. .........+++.+|.+..++......+. ..|.+...
T Consensus 311 ~~~~~vt~tv~D~~GNpv~g~~--V~f~~~~g~~~~~~~~~t~~~~tt~~~G~~~~tlta~t~aG~--~~vta~v~ 382 (414)
T 3tkv_A 311 KTTTELTFTMKDAYGNPVTGLK--PDAPVFSGAASTGSERPSAGNWTEKGNGVYVSTLTLGSAAGQ--LSVMPRVN 382 (414)
T ss_dssp TCEEEEEEECBBTTSCBCCSCC--CCCCEEESGGGCSSSCCEECCCEEEETTEEEEEEECCSCCEE--EEEECEET
T ss_pred CCeEEEEEEEEeCCCCCCCCcE--EEEEecccceeeccCCCccceeEECCCCEEEEEEEccceeeE--EEEEEEEC
Confidence 7889999999999999999753 3333221100 00011345678999999999984434555 55666554
No 42
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=96.49 E-value=0.0041 Score=78.63 Aligned_cols=90 Identities=17% Similarity=0.220 Sum_probs=64.4
Q ss_pred HHHHHHHHHHhcc-ccHHHHHHHHHHHHhccccceeeecCCCCccc---------cCCCCCCCCcchhHHHHHHHHHccC
Q psy5522 904 NIVVLEYLKKTYQ-LTDAIEAKASRYLETGYQQELTYRRPDGSFSA---------FGTTDPNGSTWLTAFVAKSFRQAAS 973 (1397)
Q Consensus 904 ~i~~l~yL~~~~~-l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~---------~~~~~~~~s~wlTAyvl~~~~~a~~ 973 (1397)
+..++..|...+. ......++|+++|.+ -|++||+|+. |.+ ...+++..||||+.+|..++.
T Consensus 497 Ta~~l~aL~~~g~~~~~~~i~rav~~L~s-------~Q~~DGgWg~~~~sy~~~~~~~-~~~s~v~~Ta~ALlaL~~ag~ 568 (631)
T 2sqc_A 497 TGAVVSALKAVGIDTREPYIQKALDWVEQ-------HQNPDGGWGEDCRSYEDPAYAG-KGASTPSQTAWALMALIAGGR 568 (631)
T ss_dssp HHHHHHHHHHTTCCTTSHHHHHHHHHHHH-------TCCTTSCCCCCGGGGTCGGGTT-CSSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCcccHHHHHHHHHHHHH-------hCcCCCCcCCccccccccccCC-CCCCCHHHHHHHHHHHHHcCC
Confidence 3344455554442 122344578887765 4778999853 222 135688999999999998876
Q ss_pred CCccCHHHHHHHHHHHHhcccCCCccccchH
Q psy5522 974 HTTIDESVILEALAWLSSNQAVNGSFPEVGK 1004 (1397)
Q Consensus 974 ~i~vd~~~~~~~~~WL~~~q~~~G~F~stqd 1004 (1397)
. +...+.++++||.++|+++|+|.++|+
T Consensus 569 ~---~~~~i~rav~wL~~~Q~~dGgw~~~~~ 596 (631)
T 2sqc_A 569 A---ESEAARRGVQYLVETQRPDGGWDEPYY 596 (631)
T ss_dssp S---SSHHHHHHHHHHHHHCCTTSCCCCCSC
T ss_pred C---ChHHHHHHHHHHHhccCCCCCcCCCCc
Confidence 4 446789999999999999999999985
No 43
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=96.23 E-value=0.035 Score=54.59 Aligned_cols=82 Identities=18% Similarity=0.208 Sum_probs=64.4
Q ss_pred eeeEEEEecCCceeeeCCEEEEEEEEEcCCCcc-EEEEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCee
Q psy5522 712 FRPFFISLDLPYSVMRGEVVAIPVVVFNYLSQD-LVADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGS 790 (1397)
Q Consensus 712 fkpffv~l~LPysv~rGE~~~l~~~VfNyl~~~-~~v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~ 790 (1397)
..++.++++.|-.+..|+.+.+.++|-|..... -...|.|...+.. .....+.|.+|+++
T Consensus 16 ~pDL~V~is~P~~v~~G~~~ti~vtV~N~G~~~a~~~~V~lyvng~~-------------------v~t~~v~La~G~s~ 76 (127)
T 3idu_A 16 FPDLTVEIKGPDVVGVNKLAEYEVHVKNLGGIGVPSTKVRVYINGTL-------------------YKNWTVSLGPKEEK 76 (127)
T ss_dssp SCCEEEEEESCSEECTTCCEEEEEEEEECSSSCEEEEEEEEEETTEE-------------------EEEEEEEECTTCEE
T ss_pred CCCeEEEecCCCcccCCCEEEEEEEEEECCCCccCCcEEEEEECCEE-------------------EeeEEeccCCCCeE
Confidence 456777888999999999999999999998765 3466666654332 11335679999999
Q ss_pred EEEEEEEeceeeeEEEEEEEEe
Q psy5522 791 TTTFVITPKELGYIGIKVTATS 812 (1397)
Q Consensus 791 tv~f~v~p~~lG~v~itV~A~~ 812 (1397)
++.|...|...|...|++.+..
T Consensus 77 tv~f~~~~~~~G~~~v~AvVD~ 98 (127)
T 3idu_A 77 VLTFNWTPTQEGMYRINATVDE 98 (127)
T ss_dssp EEEEEECCSSCEEEEEEEEEST
T ss_pred EEEEEEEcCCCcEEEEEEEEcC
Confidence 9999999999998887777643
No 44
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=95.88 E-value=3.7 Score=49.89 Aligned_cols=291 Identities=13% Similarity=0.136 Sum_probs=156.7
Q ss_pred EEEEcCCCCCceeEEEEEecCceeeEeeEEEEEEecc----cEEEEEcCCCcccCC-ceeEEEEEEEcCCCccCCCcceE
Q psy5522 61 VKLDIGDLGPGQYNLTVKGSGSLNFYNSTGLVYVHKS----YSVFIQLDKAIYKPG-DLVRFRAIVLNSHLKPSVTGALE 135 (1397)
Q Consensus 61 ~~f~vP~~~~~~~~l~v~g~~~~~f~~~~~v~~~~~~----~~vfIqTDKpIYkPG-qtV~fRvv~ld~~l~P~~~~~~~ 135 (1397)
..+.+-....|.+.+.+.- ++. .....|.|.... ...+..+...++-.| +++.+++.+.|.+-.|+.+..+.
T Consensus 70 a~~tltst~aG~~~VtAt~-~g~--s~s~~v~f~a~~~~a~~s~l~~~~~~~~A~g~~~~tltatv~Da~GNpv~g~~Vt 146 (492)
T 1cwv_A 70 ARIALTNTTDGVTVVTAEV-EGQ--RQSVDTHFVKGTIAADKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVA 146 (492)
T ss_dssp EEEEEBCSSCEEEEEEEEE-TTE--EEEEEEEEECCCBCGGGCEEEEESSEEETTSSCCEEEEEECBBTTSCBCCSCCEE
T ss_pred EEEEEEcCcceEEEEEEEE-CCc--cceeEEEEeeccCcccceeEEEeccceecCCceeEEEEEEEEcCCCCCcCCcEEE
Confidence 3344433445667776665 332 334555655321 111212222344444 68999999999999998777777
Q ss_pred EEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcCeEE---EEEEEEeeecCC---cEEEEEeCCCce
Q psy5522 136 IFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLDQKF---TKRFTVAEYVLP---KFEVNVNVPPHA 209 (1397)
Q Consensus 136 v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~~~~---~~~F~VeEYvLP---kFeV~v~~p~~i 209 (1397)
+.+ +.|.. . ...++..|.+...+.- ...|.++|.+..++... +..+.+..=..| .-.+.+. +..+
T Consensus 147 f~~--~~g~~-~--~~Ttd~~G~at~tlts---~~aG~~tVtA~v~g~~~~~~s~~vtf~a~~~~~~~~~~l~v~-~~~~ 217 (492)
T 1cwv_A 147 FDT--TLGNM-G--VITDHNDGTYSAPLTS---TTLGVATVTVKVDGAAFSVPSVTVNFTADPIPDAGRSSFTVS-TPDI 217 (492)
T ss_dssp EEE--SSSEE-C--CCEECSSSEEEEEEEC---SSCEEEEEEEEETTEEEEEEEEEEEEECCSSCCTTTCEEEES-CSEE
T ss_pred EEE--CCCce-e--eeEecCCcEEEEEEEc---cCceEEEEEEEECCccccccceEEEEEccCccccceeeEeec-ccce
Confidence 765 34432 1 2234678999888874 25899999999987322 223332211111 2334443 2333
Q ss_pred Ee-eCCeEEEEEEEEEecCccccceEEEEEEeccccCccccccccceeEEeecCceEEEEEechhhhccccccceEEEEE
Q psy5522 210 TF-KDSKVVISVNAKYTYGKPVKGEATITAYPTIFSGVIQPLFQTPVRKVVPIDGKTVIEFDVVKELQLTDEYERNIHFD 288 (1397)
Q Consensus 210 ~~-~~~~~~v~v~AkYtyGkPV~G~v~v~v~~~~~~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~~~~~~~~l~V~ 288 (1397)
.. ..+...+++..+=-+|.||+|...+++... |. .. .....++.+|.++..+.-.. .....|.
T Consensus 218 ~A~g~~~~tltatv~D~~GNpv~g~~~V~f~~~---G~---~v--~~s~~T~~~G~~t~t~t~~~--------aG~~tVt 281 (492)
T 1cwv_A 218 LADGTMSSTLSFVPVDKNGHFISGMQGLSFTQN---GV---PV--SISPITEQPDSYTATVVGNS--------VGDVTIT 281 (492)
T ss_dssp ETTSCCCEEEEEECBCTTSCBCCSCCSEEEEEE---ES---CC--EECCCEECSSCEEEEEECSS--------CEEEEEE
T ss_pred eeCCcceEEEEEEEECCCCCCccCCceEEEecC---Cc---ee--eeeeEecCCceEEEEEEcCc--------ceEEEEE
Confidence 32 236688999999999999999532333221 11 00 12234688999988876432 2467788
Q ss_pred EEEEECCcceEEeeE-EEEEEEEeeeEEEEEec-CCccc--CCCeEE----EEEEEEccCCCccCCCCceEEEEEeeecc
Q psy5522 289 VAVEEALTGRRQNNT-GSVVFHKHKYKMDLIKS-SEYFK--PGLKYT----AYMKLTHHDGTPVTDNNNMVQVRHGFSYD 360 (1397)
Q Consensus 289 a~VtE~gTG~~~~~~-~~i~i~~~~~~i~f~~~-~~~~k--pG~p~~----~~v~v~~~dG~P~~~~~~~V~v~~~~~~~ 360 (1397)
|++ .|...... ..+.+.... .+.-... ..-|. +|.|-. +++++.. +|.|+.+ ..+.....
T Consensus 282 A~~----~g~~~~~~~~~i~f~~~~-~~~~i~vng~~~~~~~gfP~tgf~~A~f~~~~-~~~~~~n--~~y~wsss---- 349 (492)
T 1cwv_A 282 PQV----DTLILSTLQKKISLFPVP-TLTGILVNGQNFATDKGFPKTIFKNATFQLQM-DNDVANN--TQYEWSSS---- 349 (492)
T ss_dssp EEE----TTEECGGGCEEEEEECCC-CEEEEEETTEEECTTSCCCSEEETTCEEEEEE-TTCGGGG--GGEEEEES----
T ss_pred EEE----CCcccccccceEEEEeec-ccceEEeccccccccCCCCceeEEeEEEEEec-CCccccC--Cceeeccc----
Confidence 877 24333322 233333211 1111111 11121 233333 2555544 6777663 23443321
Q ss_pred ccccceeeEeeCCCeeEEEEEeCCCCCceeEEEEEEEecC
Q psy5522 361 ESKYEANQYKLDRNGMIKLVYYPPANENVTTLGIEAEYLD 400 (1397)
Q Consensus 361 ~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~a~~~~ 400 (1397)
.....++|++|.+.|..... +. ++|.|+..+
T Consensus 350 ----~~~~~tvd~~G~vt~~~~~~---~~--vtITat~~~ 380 (492)
T 1cwv_A 350 ----FTPNVSVNDQGQVTITYQTY---SE--VAVTAKSKK 380 (492)
T ss_dssp ----STTTEEECTTCEEEECSCCS---SC--EEEEEEESS
T ss_pred ----CcceEEECCCceEEEEecCC---CE--EEEEEEeCC
Confidence 12236789999999985432 33 678877665
No 45
>3q7a_B Farnesyltransferase beta subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_B* 3q78_B* 3q79_B* 3q75_B* 3q7f_B* 3sfx_B* 3sfy_B*
Probab=95.82 E-value=0.02 Score=68.83 Aligned_cols=109 Identities=11% Similarity=0.048 Sum_probs=75.6
Q ss_pred hccCCCchhhhhcccchHHHHHHHHHHhc-cccHHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCCcchhHHHH
Q psy5522 887 IKMPFGCGEQNMLNFVPNIVVLEYLKKTY-QLTDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGSTWLTAFVA 965 (1397)
Q Consensus 887 l~~P~GCgEQ~m~~~~p~i~~l~yL~~~~-~l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl 965 (1397)
-.+|.....+-.++..-.-+.+.-|+--+ .++++.+++++++|.+ +|++||+|+.+......+.++.|.+|+
T Consensus 75 ~~LP~~y~~~Dasr~wl~Yw~l~aL~LLg~~ld~~~~~~~I~~Ils-------~Q~~dGGFgg~p~~~~~~hla~TysAV 147 (520)
T 3q7a_B 75 FQLPGKFVSLDASRPWLVFWTVHSLDLLGVALDQGTKDRVVSTLLH-------FLSPKGGFGGGPANSQIPHLLPTYASV 147 (520)
T ss_dssp SCBCGGGGGGGGGHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHT-------TBCTTSSBCSSCTTTSCCCHHHHHHHH
T ss_pred hhCChhhhhcccchHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHH-------HcCCCCCCCCCCCCCCCCcHHHHHHHH
Confidence 33455544444555555555665555555 5677778888887653 688999999886212367899999999
Q ss_pred HHHHHccCCCc---cCHHH--HHHHHHHHHhcccCCCccccc
Q psy5522 966 KSFRQAASHTT---IDESV--ILEALAWLSSNQAVNGSFPEV 1002 (1397)
Q Consensus 966 ~~~~~a~~~i~---vd~~~--~~~~~~WL~~~q~~~G~F~st 1002 (1397)
.+|...+.... .+.-. ..++++||.+.|+++|+|...
T Consensus 148 ~aL~ilg~~~p~~~~~~Id~~r~k~v~fL~slQ~~DGSF~g~ 189 (520)
T 3q7a_B 148 CSLAIAGNDSSTGGWKDLAAARQSIYEFFMRCKRPDGGFVVC 189 (520)
T ss_dssp HHHHHHCBSSTTSBHHHHHHTHHHHHHHHHHHBCTTSCBBSS
T ss_pred HHHHHhCccccchhhhhhhhHHHHHHHHHHHHhCCCCCEecC
Confidence 99998875321 22222 668999999999999999753
No 46
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=95.74 E-value=0.018 Score=73.74 Aligned_cols=72 Identities=15% Similarity=0.236 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhccccceeeecCCCCccc---------cCCCCCCCCcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHh
Q psy5522 921 IEAKASRYLETGYQQELTYRRPDGSFSA---------FGTTDPNGSTWLTAFVAKSFRQAASHTTIDESVILEALAWLSS 991 (1397)
Q Consensus 921 ~~~~a~~~l~~gy~~~l~y~~~dGsfs~---------~~~~~~~~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~ 991 (1397)
..++|.++|.+ -|+.||+|+. |... ..++++.|||++++|..++.. |...+.++++||.+
T Consensus 611 ~i~rav~~Lls-------~Q~~DGGWge~~~s~~~~~y~~~-~~s~v~~TAwALlALl~ag~~---~~~~i~r~v~wL~~ 679 (732)
T 1w6k_A 611 EVSRACDFLLS-------RQMADGGWGEDFESCEERRYVQS-AQSQIHNTCWAMMGLMAVRHP---DIEAQERGVRCLLE 679 (732)
T ss_dssp HHHHHHHHHHT-------TCCTTSCCCBCTHHHHHTSCCBC-SSCCHHHHHHHHHHHHHTTCS---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------hcccCCCCCCCCccccccccCCC-CCCCHHHHHHHHHHHHHcCCC---ChHHHHHHHHHHHH
Confidence 44577776654 4778998753 2221 246789999999999988753 77789999999999
Q ss_pred cccCCCccccch
Q psy5522 992 NQAVNGSFPEVG 1003 (1397)
Q Consensus 992 ~q~~~G~F~stq 1003 (1397)
+|+++|+|.+++
T Consensus 680 ~Q~~~Ggf~~~~ 691 (732)
T 1w6k_A 680 KQLPNGDWPQEN 691 (732)
T ss_dssp HCCTTSCCCCCS
T ss_pred hcCCCCCccCCc
Confidence 999999999765
No 47
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=95.41 E-value=0.12 Score=50.00 Aligned_cols=82 Identities=11% Similarity=0.254 Sum_probs=61.7
Q ss_pred CCceeEEEEEEEcCCCccC-----CCcceEEEEECCCCCeEEeeeee-----------ccCCceeeeeeecCCCCCCeeE
Q psy5522 111 PGDLVRFRAIVLNSHLKPS-----VTGALEIFITDGKGNRIKQWTRA-----------LTTRGVFSADLQLSKSPVLGDW 174 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~-----~~~~~~v~I~DP~g~~I~qw~~~-----------~~~~Gi~~~sf~L~~~~~lG~y 174 (1397)
+|+.|.|++...+..-.|. .+....+.|.|+.|++|-+|... ....-....+..+++.+..|.|
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Y 95 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTY 95 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccE
Confidence 8889999999988754443 46788999999999999988642 1223345667777877789999
Q ss_pred EEEEEEcC-------eEEEEEEEEe
Q psy5522 175 NITINVLD-------QKFTKRFTVA 192 (1397)
Q Consensus 175 ~I~v~~~~-------~~~~~~F~Ve 192 (1397)
++++...+ ...-++|+|+
T Consensus 96 tl~a~l~~~~~~~~~~~~~~~~~~~ 120 (120)
T 3isy_A 96 EVKVTFKGRAENLKQVQAVQQFEVK 120 (120)
T ss_dssp EEEEEECCEETTCCCCEEEEEEEEC
T ss_pred EEEEEEEeeeccceeeeeeeEEEeC
Confidence 99999875 2456677774
No 48
>3dss_B Geranylgeranyl transferase type-2 subunit beta; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1ltx_B* 3c72_B* 1dce_B 3dst_B* 3dsu_B* 3dsv_B* 3dsw_B* 3dsx_B* 3hxb_B* 3hxc_B* 3hxd_B* 3hxe_B* 3hxf_B* 3pz1_B* 3pz2_B* 3pz3_B* 4ehm_B* 4gts_B* 4gtt_B* 4gtv_B*
Probab=95.25 E-value=0.034 Score=64.25 Aligned_cols=75 Identities=13% Similarity=0.061 Sum_probs=55.9
Q ss_pred ccccHHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCCcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhccc
Q psy5522 915 YQLTDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQA 994 (1397)
Q Consensus 915 ~~l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~ 994 (1397)
+.++....+++++||.+ -|+.||+|+.-++. ++..-.|+.++.+|..++..-.+ .+.++++||.++|.
T Consensus 157 g~~~~~~~~k~v~~L~s-------~Q~~dGGfg~~pg~--esh~~~T~~al~aL~llg~~~~~---~~~~~~~wL~~~Q~ 224 (331)
T 3dss_B 157 GKLDAINVEKAIEFVLS-------CMNFDGGFGCRPGS--ESHAGQIYCCTGFLAITSQLHQV---NSDLLGWWLCERQL 224 (331)
T ss_dssp TCGGGSCHHHHHHHHHT-------TBCTTSCBCSSTTC--CCCHHHHHHHHHHHHHTTCGGGS---CHHHHHHHHHTTBC
T ss_pred CCCCHHHHHHHHHHHHH-------hCcCCCCcCCCCCC--CCcHHHHHHHHHHHHhccccchh---hHHHHHHHHHHhCC
Confidence 44444456788888876 46789999765432 45677899999999888764223 37889999999999
Q ss_pred CCCcccc
Q psy5522 995 VNGSFPE 1001 (1397)
Q Consensus 995 ~~G~F~s 1001 (1397)
++|||..
T Consensus 225 ~dGGf~g 231 (331)
T 3dss_B 225 PSGGLNG 231 (331)
T ss_dssp TTSCBCS
T ss_pred CCCCcCC
Confidence 9999974
No 49
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=94.82 E-value=1.7 Score=49.62 Aligned_cols=198 Identities=10% Similarity=0.059 Sum_probs=113.1
Q ss_pred eecCCeEEEEEEeecCC------ccEEEEEEEEeecCCCCeeEEeEEEEECCCceeEEEEEcCCCCCceeEEEEEecCc-
Q psy5522 10 LRPNGEYHVAVSTQAVS------EATQVSVEVGGKQDSGGEFRTKQLLSVDPFSTRIVKLDIGDLGPGQYNLTVKGSGS- 82 (1397)
Q Consensus 10 lr~g~~~~v~v~l~~~~------~~v~v~v~L~~~~~~~~~~~~~~~~~~~~~~~~~~~f~vP~~~~~~~~l~v~g~~~- 82 (1397)
-..|.+-.+.|+..+.+ +.-.++|.+.+. . . +...+.-..+....+.|. | ..+|.|.|.|+-.+.
T Consensus 18 ~~~g~~~~F~v~~~da~G~~~~~g~~~~~v~i~gp-~-~----~~~~~~d~~dG~y~v~y~-p-~~~G~~~i~v~~~~~~ 89 (311)
T 1wlh_A 18 GECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGP-A-P----VDPVMVDNGDGTYDVEFE-P-KEAGDYVINLTLDGDN 89 (311)
T ss_dssp EETTSCEEEEEECCSSSCC---CCCCCEEEEEESS-S-C----CCCBCCCCSSSEEEEEEC-C-CSCSEEEEEEEESSSB
T ss_pred cccCCCEEEEEEEecCCCCEeccCCCeEEEEEECC-C-c----cEEEEEECCCCEEEEEEE-c-cCccceEEEEEECCEE
Confidence 35678888888887752 223456666654 1 1 011111122333445563 4 335778888775321
Q ss_pred ---eeeEeeEEEEEEecccEEEEEcCCCcccCCceeEEEEEEEcCCCccC--CCcceEEEEECCCCCeEEeeeeeccCCc
Q psy5522 83 ---LNFYNSTGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPS--VTGALEIFITDGKGNRIKQWTRALTTRG 157 (1397)
Q Consensus 83 ---~~f~~~~~v~~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~--~~~~~~v~I~DP~g~~I~qw~~~~~~~G 157 (1397)
-.|.-.-.-........++-.-=++ -..|+...|.+-++|.+..|. ....+.+.|.+|+|..+.-. ......|
T Consensus 90 i~gsPf~~~v~~~~d~~~~~~~G~gl~~-~~~g~~~~f~V~~~D~~G~~~~~g~~~~~v~i~~p~g~~~~~~-v~d~~dG 167 (311)
T 1wlh_A 90 VNGFPKTVTVKPAPSAEHSYAEGEGLVK-VFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDAK-VTDNNDG 167 (311)
T ss_dssp CTTCSEEEEEECCBCTTTCCEESGGGTC-EESSSCEEEEEECBBSSSSBCSSCCCCEEEEEECTTSCBCCCE-EEEETTT
T ss_pred CCCCceEEEEccccccceeEEeccccce-eecCCCEEEEEEecCCCCCEEecCCCcEEEEEECCCCCeeeEE-EEECCCC
Confidence 1121110000111122222110011 257899999999999876664 34678999999999755432 3456789
Q ss_pred eeeeeeecCCCCCCeeEEEEEEEcCeEEEEEEEEeeecCCcEEEEEeC---CCceEeeCCeEEEEEEEEEecCcccc
Q psy5522 158 VFSADLQLSKSPVLGDWNITINVLDQKFTKRFTVAEYVLPKFEVNVNV---PPHATFKDSKVVISVNAKYTYGKPVK 231 (1397)
Q Consensus 158 i~~~sf~L~~~~~lG~y~I~v~~~~~~~~~~F~VeEYvLPkFeV~v~~---p~~i~~~~~~~~v~v~AkYtyGkPV~ 231 (1397)
.+..+|.... .|.|+|.+..+++... ---|.|.|.. |..+.. +...++|.++-.+|.|+.
T Consensus 168 ty~v~y~p~~---~G~y~i~V~~~g~~I~---------gSPF~v~V~~~~d~~~v~~--~~~~f~V~~~D~~gn~~~ 230 (311)
T 1wlh_A 168 TYGVVYDAPV---EGNYNVNVTLRGNPIK---------NMPIDVKCIEGANGEDSSF--GSFTFTVAAKNKKGEVKT 230 (311)
T ss_dssp EEEEEECCCS---SEEEEEEEEETTEECT---------TCSCEEEEECCCCGGGCEE--EEEEEEEECBCTTSSBCS
T ss_pred EEEEEEECCC---CEEEEEEEEECCEECC---------CCCEEEEECCCCCCCceEE--EeEEEEEEEeccCCCeee
Confidence 9999998654 6999999999872110 0125555543 223332 567888888888888873
No 50
>3q7a_B Farnesyltransferase beta subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_B* 3q78_B* 3q79_B* 3q75_B* 3q7f_B* 3sfx_B* 3sfy_B*
Probab=94.31 E-value=0.087 Score=63.39 Aligned_cols=91 Identities=15% Similarity=0.170 Sum_probs=61.7
Q ss_pred hcccchHHHHHHHHHHhccc-----cHHH---HHHHHHHHHhccccceeeecCCCCccc--cCCCCCCCCcchhHHHHHH
Q psy5522 898 MLNFVPNIVVLEYLKKTYQL-----TDAI---EAKASRYLETGYQQELTYRRPDGSFSA--FGTTDPNGSTWLTAFVAKS 967 (1397)
Q Consensus 898 m~~~~p~i~~l~yL~~~~~l-----~~~~---~~~a~~~l~~gy~~~l~y~~~dGsfs~--~~~~~~~~s~wlTAyvl~~ 967 (1397)
..+++.+..++.-|.--+.. ...+ ++++++||.+ -|.+||||.. || ..++.-|-.|+.+
T Consensus 137 ~~hla~TysAV~aL~ilg~~~p~~~~~~Id~~r~k~v~fL~s-------lQ~~DGSF~g~~wG----e~Dir~TY~Al~~ 205 (520)
T 3q7a_B 137 IPHLLPTYASVCSLAIAGNDSSTGGWKDLAAARQSIYEFFMR-------CKRPDGGFVVCEGG----EVDVRGTYCLLVV 205 (520)
T ss_dssp CCCHHHHHHHHHHHHHHCBSSTTSBHHHHHHTHHHHHHHHHH-------HBCTTSCBBSSTTC----CBCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhCccccchhhhhhhhHHHHHHHHHHH-------HhCCCCCEecCCCC----CchHHHHHHHHHH
Confidence 45555555555555544432 1233 5678888775 4788999954 43 3467777666666
Q ss_pred HHHccCCCccCHHHHHHHHHHHHhcccCCCccccc
Q psy5522 968 FRQAASHTTIDESVILEALAWLSSNQAVNGSFPEV 1002 (1397)
Q Consensus 968 ~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~st 1002 (1397)
+..++. .+...++++++||.+.|+++|||+.+
T Consensus 206 L~lLg~---~~~~~v~kav~fI~scQn~DGGfGe~ 237 (520)
T 3q7a_B 206 ATLLDI---ITPELLHNVDKFVSACQTYEGGFACA 237 (520)
T ss_dssp HHHHTC---CCHHHHTTHHHHHHTTBCTTSSBCSC
T ss_pred HHHcCC---CChHHHHHHHHHHHHhcCCCCCccCc
Confidence 655554 36677899999999999999999873
No 51
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=93.95 E-value=0.75 Score=49.39 Aligned_cols=105 Identities=12% Similarity=0.200 Sum_probs=75.2
Q ss_pred CCceeEEEEEEEcCCCccC--CCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcCeEEEEE
Q psy5522 111 PGDLVRFRAIVLNSHLKPS--VTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLDQKFTKR 188 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~--~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~~~~~~~ 188 (1397)
.|+...|.|.++|.+-++. ....+.+.|.+|+|..+.- .......|.+..+|.... .|.|+|.+..++.....
T Consensus 21 ~g~~~~F~V~~~D~~G~~~~~G~~~~~v~i~~p~g~~~~~-~v~d~~dGty~v~y~p~~---~G~~~i~V~~~g~~i~g- 95 (212)
T 1qfh_A 21 DNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGLVVDA-KVTDNNDGTYGVVYDAPV---EGNYNVNVTLRGNPIKN- 95 (212)
T ss_dssp TTSCEEEEEECBBSSSCBCSSCCCCEEEEEECGGGCEECC-EEEECSSSEEEEEECCCS---SEEEEEEEEETTEECBT-
T ss_pred cCCcEEEEEEEEcCCCCEeecCCCeEEEEEECCCCCEeee-EEEECCCcEEEEEEECcC---cEEEEEEEEECCEecCC-
Confidence 6899999999999877663 4578999999999976543 335567899999999644 69999999998732110
Q ss_pred EEEeeecCCcEEEEEeCC---CceEeeCCeEEEEEEEEEecCccc
Q psy5522 189 FTVAEYVLPKFEVNVNVP---PHATFKDSKVVISVNAKYTYGKPV 230 (1397)
Q Consensus 189 F~VeEYvLPkFeV~v~~p---~~i~~~~~~~~v~v~AkYtyGkPV 230 (1397)
--|.|.+.+. ..... +...++|.++-.+|.|.
T Consensus 96 --------SPf~v~v~~~~~~~~~~~--~~~~f~V~~~D~~G~~~ 130 (212)
T 1qfh_A 96 --------MPIDVKCIEGANGEDSSF--GSFTFTVAAKNKKGEVK 130 (212)
T ss_dssp --------CSEEEEEECCCCGGGCEE--EEEEEEEECBCTTSSBC
T ss_pred --------CcceEEEccCCCCCceEE--EEEEEEEEEeccCCCEe
Confidence 1255555542 12222 66778888888888776
No 52
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=93.68 E-value=3.2 Score=49.31 Aligned_cols=217 Identities=15% Similarity=0.177 Sum_probs=134.3
Q ss_pred ceeEEEEEcCCCCCceeEEEEEecCceeeE-eeEEEEEEecccE---EEEEcCCCcccCCceeEEEEEEEcCCCccCCCc
Q psy5522 57 STRIVKLDIGDLGPGQYNLTVKGSGSLNFY-NSTGLVYVHKSYS---VFIQLDKAIYKPGDLVRFRAIVLNSHLKPSVTG 132 (1397)
Q Consensus 57 ~~~~~~f~vP~~~~~~~~l~v~g~~~~~f~-~~~~v~~~~~~~~---vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~~ 132 (1397)
....+.|..+ ...|.+.+.+.- ++..+. ....|.|...... .-+..+++-+..|++..|++.++|.+-.|+.+.
T Consensus 152 G~~tatlT~~-t~aG~~~Vta~v-~g~~~~~~~~~vtf~a~~~sa~~s~l~~~~~~~~Ag~~~t~t~~v~Da~GNpv~g~ 229 (414)
T 3tkv_A 152 GTWTAQISLG-TTAGELDVMPKL-NGQDAAANAAKVTVVADALSSNQSKVSVAEDHVKAGESTTVTLVAKDAHGNAISGL 229 (414)
T ss_dssp SEEEEEEECC-SCCEEEEEECEE-TTEECSSSCEEEEEBCCSBCTTTCEEEESCSEEETTCEEEEEEECBBTTCCBCCSC
T ss_pred cEEEEEEEec-cccccEEEEEEE-CCeeccccceeEEEEcCCCcceeeEEEEcccceecCCEEEEEEEEEcCCCCCcCCC
Confidence 3334444433 334556666555 232221 3446666554321 234558888999999999999999999999888
Q ss_pred ceEEEEECCC--CCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcCeE-----EEEEEEEeeecCCcEEEEEeC
Q psy5522 133 ALEIFITDGK--GNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLDQK-----FTKRFTVAEYVLPKFEVNVNV 205 (1397)
Q Consensus 133 ~~~v~I~DP~--g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~~~-----~~~~F~VeEYvLPkFeV~v~~ 205 (1397)
.+.+.+.++. |-.+..|. ....|.+...|.++. ..|.|+|.+..++.. ..-.|.=..--.-++.+....
T Consensus 230 ~V~f~~~~~~~~~~t~s~~t--t~~~G~~~~t~ta~t--~aG~~~Vta~v~g~~~~~~~~~vt~~a~~~~~~~s~l~~~~ 305 (414)
T 3tkv_A 230 SLSASLTGTASEGATVSSWT--EKGDGSYVATLTTGG--KTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADN 305 (414)
T ss_dssp CEEEEEESGGGTTCEECCCE--EEETTEEEEEEECCS--CCEEEEEEEEETTEECSSSCEEEEEECCSBCTTTCEEEESC
T ss_pred EEEEEEccCCCCCceecceE--ECCCcEEEEEEEcCc--ccceEEEEEEECCEeccccceEEEEecCCccccceEEEeCC
Confidence 8888887653 56666663 456799999998665 469999999998732 122332112222245554433
Q ss_pred CCceEeeCCeEEEEEEEEEecCccccce-EEEEEEeccc-cCccccccccceeEEeecCceEEEEEechhhhccccccce
Q psy5522 206 PPHATFKDSKVVISVNAKYTYGKPVKGE-ATITAYPTIF-SGVIQPLFQTPVRKVVPIDGKTVIEFDVVKELQLTDEYER 283 (1397)
Q Consensus 206 p~~i~~~~~~~~v~v~AkYtyGkPV~G~-v~v~v~~~~~-~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~~~~~~~ 283 (1397)
. ....++...+++.++=-||.||.|. +.+.+....- .+...+ ......++.+|.++..+.... ...
T Consensus 306 ~--~~~a~~~~~vt~tv~D~~GNpv~g~~V~f~~~~g~~~~~~~~~---t~~~~tt~~~G~~~~tlta~t-------~aG 373 (414)
T 3tkv_A 306 K--TPTVKTTTELTFTMKDAYGNPVTGLKPDAPVFSGAASTGSERP---SAGNWTEKGNGVYVSTLTLGS-------AAG 373 (414)
T ss_dssp S--SCBTTCEEEEEEECBBTTSCBCCSCCCCCCEEESGGGCSSSCC---EECCCEEEETTEEEEEEECCS-------CCE
T ss_pred c--eeecCCeEEEEEEEEeCCCCCCCCcEEEEEecccceeeccCCC---ccceeEECCCCEEEEEEEccc-------eee
Confidence 3 2345678899999999999999994 4333311000 000000 112456788999999988422 124
Q ss_pred EEEEEEEE
Q psy5522 284 NIHFDVAV 291 (1397)
Q Consensus 284 ~l~V~a~V 291 (1397)
.+.|.|+|
T Consensus 374 ~~~vta~v 381 (414)
T 3tkv_A 374 QLSVMPRV 381 (414)
T ss_dssp EEEEECEE
T ss_pred EEEEEEEE
Confidence 67788887
No 53
>1n4q_B Geranyltransferase type-I beta subunit; protein geranylgeranyltransferase type-I, ggtase; HET: MGM GER; 2.40A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1n4p_B* 1n4r_B* 1n4s_B* 1s64_B* 1tnb_B* 1tno_B* 1tnu_B* 1tny_B* 1tnz_B*
Probab=92.99 E-value=0.1 Score=61.08 Aligned_cols=89 Identities=11% Similarity=0.063 Sum_probs=55.2
Q ss_pred ccchHHHHHHHHHHhc-cccHHHHHHHHHHHHhccccceeeecCCCCccc---cCCCCCCCCcchhHHHHHHHHHccCCC
Q psy5522 900 NFVPNIVVLEYLKKTY-QLTDAIEAKASRYLETGYQQELTYRRPDGSFSA---FGTTDPNGSTWLTAFVAKSFRQAASHT 975 (1397)
Q Consensus 900 ~~~p~i~~l~yL~~~~-~l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~---~~~~~~~~s~wlTAyvl~~~~~a~~~i 975 (1397)
+++.+..++.-|..-+ .+..--++++++||.+ -|.+||||.. |+. .++.-|-.|+.++..++..
T Consensus 121 ~v~~T~~Al~~L~~lg~~~~~id~~~~~~fL~~-------~Q~~DGSf~g~~~wGe----~DirftY~Al~~l~llg~~- 188 (377)
T 1n4q_B 121 HIAMTYTGLSCLIILGDDLSRVDKEACLAGLRA-------LQLEDGSFCAVPEGSE----NDMRFVYCASCICYMLNNW- 188 (377)
T ss_dssp CHHHHHHHHHHHHHTTCCSTTSCHHHHHHHHHH-------HBCTTSCBCSSTTCCC----CBHHHHHHHHHHHHHTTCG-
T ss_pred CHHHHHHHHHHHHHhCcccchhhHHHHHHHHHH-------hcCCCCCeeeccCCCc----chhHHHHHHHHHHHHhcCC-
Confidence 3444444444444333 2222224678888875 4789999864 433 3455554555555444442
Q ss_pred ccCHHHHHHHHHHHHhcccCCCccccc
Q psy5522 976 TIDESVILEALAWLSSNQAVNGSFPEV 1002 (1397)
Q Consensus 976 ~vd~~~~~~~~~WL~~~q~~~G~F~st 1002 (1397)
+...+.++++||.+.|+++|||+..
T Consensus 189 --~~~~v~ka~~fL~scQn~DGGfGe~ 213 (377)
T 1n4q_B 189 --SGMDMKKAISYIRRSMSYDNGLAQG 213 (377)
T ss_dssp --GGSCHHHHHHHHHHTBCTTSSBBSS
T ss_pred --ChHHHHHHHHHHHHhcCCCCCCCCC
Confidence 3445789999999999999999864
No 54
>2h6f_B Protein farnesyltransferase beta subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.102.4.3 PDB: 1jcq_B* 1ld7_B* 1mzc_B* 1s63_B* 1sa4_B* 1tn6_B* 2f0y_B* 1ld8_B* 2iej_B* 3e37_B* 2h6h_B* 2h6g_B* 2h6i_B* 1o1t_B* 1o1s_B* 1o1r_B* 3eu5_B* 3pz4_B* 3e33_B* 1d8e_B* ...
Probab=92.73 E-value=0.11 Score=62.25 Aligned_cols=79 Identities=13% Similarity=0.143 Sum_probs=57.4
Q ss_pred HHHhccccHHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCCcchhHHHHHHHHHccCCCccCHHHHHHHHHHHH
Q psy5522 911 LKKTYQLTDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFRQAASHTTIDESVILEALAWLS 990 (1397)
Q Consensus 911 L~~~~~l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~ 990 (1397)
|...+..+.+..+++.+||.+ .|+.||+|+.-++ ..+..--|++++.+|..+++. |...+.++++||.
T Consensus 211 L~llg~~~~~~v~k~~~~L~s-------~Q~~DGGwg~~pg--~eSh~~~T~~Al~aL~~lg~~---~~~~~~rl~~wL~ 278 (437)
T 2h6f_B 211 ASLTNIITPDLFEGTAEWIAR-------CQNWEGGIGGVPG--MEAHGGYTFCGLAALVILKRE---RSLNLKSLLQWVT 278 (437)
T ss_dssp HHHTTCCCTTTTTTHHHHHHH-------HBCTTSSBCSSTT--SCCCHHHHHHHHHHHHHHTCG---GGSCHHHHHHHHH
T ss_pred HHHhCCCChHHHHHHHHHHHH-------ccCCCCCcCCCCC--CCCCccHHHHHHHHHHHcCCC---CcccHHHHHHHHH
Confidence 333444555555678888765 5889999865433 245678899999999988764 3334778899999
Q ss_pred hccc-CCCcccc
Q psy5522 991 SNQA-VNGSFPE 1001 (1397)
Q Consensus 991 ~~q~-~~G~F~s 1001 (1397)
++|. .+|||..
T Consensus 279 ~rQ~~~~GGf~g 290 (437)
T 2h6f_B 279 SRQMRFEGGFQG 290 (437)
T ss_dssp HTBCTTTCSBBS
T ss_pred hcCCCCCCCccC
Confidence 9887 8999964
No 55
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=91.86 E-value=2 Score=40.09 Aligned_cols=78 Identities=9% Similarity=0.048 Sum_probs=52.4
Q ss_pred cCCcccCCCeEEEEEEEEccCCCccCCCCceEEEEEeeeccccccceeeEeeCCCeeEEEEEeCCCCCceeEEEEEEEec
Q psy5522 320 SSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGMIKLVYYPPANENVTTLGIEAEYL 399 (1397)
Q Consensus 320 ~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~a~~~ 399 (1397)
....|+||....+++.+.|.+..|+.+ ..+.+.+... +..........++++|.+.++|.+|++...-.++|++...
T Consensus 9 Dr~iYrPGetV~~~~~~~~~~~~p~~~--~~~~v~l~dp-~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~ 85 (102)
T 2p9r_A 9 DKSIYKPGQTVKFRVVSMDENFHPLNE--LIPLVYIQDP-KGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 85 (102)
T ss_dssp SCSEECTTCEEEEEEEEECGGGCBCCC--EEEEEEEECT-TSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred CCcccCCCCEEEEEEEEECCCCcCCCC--CceEEEEECC-CCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEEC
Confidence 456899999999999999999998863 2345544211 1111122345678899999999988765444467777665
Q ss_pred C
Q psy5522 400 D 400 (1397)
Q Consensus 400 ~ 400 (1397)
+
T Consensus 86 ~ 86 (102)
T 2p9r_A 86 S 86 (102)
T ss_dssp T
T ss_pred C
Confidence 3
No 56
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=90.80 E-value=0.77 Score=40.92 Aligned_cols=59 Identities=24% Similarity=0.293 Sum_probs=39.1
Q ss_pred EEEEEEEccCCCccCCCCceEEEEEeeeccccccceeeEeeCCCeeEEEEEeCCCCCceeEEEEEEEec
Q psy5522 331 TAYMKLTHHDGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGMIKLVYYPPANENVTTLGIEAEYL 399 (1397)
Q Consensus 331 ~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~a~~~ 399 (1397)
.+.|+++|.+|+|+++. .|.+.+. +|.+ -.......||++|.++|+. +.++ +.|.|...
T Consensus 2 ~~~v~V~d~~GkPV~gA--~Vefe~y-Nyae-~~~~~~~~TD~~G~~s~~~----G~Gd--~~v~A~k~ 60 (82)
T 3e8v_A 2 KGSVLVTDAEGQPVADA--TVEFKVY-NYAE-FYTVATKHTDRSGHASLTA----GKGD--MLVWASKD 60 (82)
T ss_dssp EEEEEEECTTSCBCTTC--EEEEEEE-ETTE-EEEEEEEECCTTSEEEEEC----CSEE--EEEEEEET
T ss_pred cEEEEEEcCCCCCCCCC--EEEEEEE-Echh-eeEEEEEEECCCceEEEEE----cCCc--eEEEeccC
Confidence 46899999999999975 5555542 2211 1234567899999887764 4445 77777443
No 57
>1n4q_B Geranyltransferase type-I beta subunit; protein geranylgeranyltransferase type-I, ggtase; HET: MGM GER; 2.40A {Rattus norvegicus} SCOP: a.102.4.3 PDB: 1n4p_B* 1n4r_B* 1n4s_B* 1s64_B* 1tnb_B* 1tno_B* 1tnu_B* 1tny_B* 1tnz_B*
Probab=90.20 E-value=0.41 Score=56.03 Aligned_cols=71 Identities=17% Similarity=0.142 Sum_probs=52.6
Q ss_pred HHHHHHHHHhccccceeeec---------CCCCccccCCC-----C----------CCCCcchhHHHHHHHHHccCC-Cc
Q psy5522 922 EAKASRYLETGYQQELTYRR---------PDGSFSAFGTT-----D----------PNGSTWLTAFVAKSFRQAASH-TT 976 (1397)
Q Consensus 922 ~~~a~~~l~~gy~~~l~y~~---------~dGsfs~~~~~-----~----------~~~s~wlTAyvl~~~~~a~~~-i~ 976 (1397)
+++++++|.. +|+ .+|+|+.|... + ..+.+..|.+++.+|...+.. -.
T Consensus 69 ~~~~i~wils-------~Q~~p~~~~~~~~~GGF~g~~~~~~p~~d~~~~~~~~~~d~~~v~~T~~Al~~L~~lg~~~~~ 141 (377)
T 1n4q_B 69 KDDIIEWIYS-------LQVLPTEDRSNLDRCGFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTGLSCLIILGDDLSR 141 (377)
T ss_dssp HHHHHHHHHT-------TEECCCTTCTTGGGCEECSSSTTCCCCCSSCSCCCCCTTCCCCHHHHHHHHHHHHHTTCCSTT
T ss_pred HHHHHHHHHH-------hcCCccccccCCCCCccCCCcccCCChhhhccccccccCCCCCHHHHHHHHHHHHHhCcccch
Confidence 6678877753 344 58999988642 1 136789999999999877643 23
Q ss_pred cCHHHHHHHHHHHHhcccCCCccccc
Q psy5522 977 IDESVILEALAWLSSNQAVNGSFPEV 1002 (1397)
Q Consensus 977 vd~~~~~~~~~WL~~~q~~~G~F~st 1002 (1397)
||. .++++||.+.|+++|+|...
T Consensus 142 id~---~~~~~fL~~~Q~~DGSf~g~ 164 (377)
T 1n4q_B 142 VDK---EACLAGLRALQLEDGSFCAV 164 (377)
T ss_dssp SCH---HHHHHHHHHHBCTTSCBCSS
T ss_pred hhH---HHHHHHHHHhcCCCCCeeec
Confidence 443 67899999999999999864
No 58
>2bb6_A TCII, TC II, transcobalamin II; alpha_6 - alpha_6 barrel, transport protein; HET: B12; 2.00A {Bos taurus} PDB: 2bbc_A* 2v3n_A* 2v3p_A* 2bb5_A*
Probab=90.15 E-value=0.32 Score=57.11 Aligned_cols=88 Identities=16% Similarity=0.174 Sum_probs=62.4
Q ss_pred CCchHHHHHHHHHHhhCCCCchHHHHHHHhhcccccCCcccccccCCCCCCCCCCCCCCCcccchhhHHHHHHhhc--c-
Q psy5522 1174 TEDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWAQVPNSVDVEMTSYALLSYLD--R- 1250 (1397)
Q Consensus 1174 ~~~~y~~al~aYal~la~~~~~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~~--~- 1250 (1397)
..+.|..||..-||.++|......+..+|...... + .||. ....+|-+||-|+||+.- +
T Consensus 133 ~tn~Yq~sL~vLALC~~g~~v~~~~v~~Ll~~~~~-~--~~~~---------------g~~~sVDT~AMA~lAL~C~~~~ 194 (414)
T 2bb6_A 133 RTSYYQYSLGILALCVHQKRVHDSVVGKLLYAVEH-K--PHLL---------------QDHVSVDTMAMAGMAFSCLELS 194 (414)
T ss_dssp SSCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHS-S--SCSC---------------CTTTHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHcCCCccHHHHHHHHHHhhc-c--CcCC---------------CCcccccHHHHHHHHHHHHhhc
Confidence 46789999999999999998877777777654431 1 2221 124688999999999763 1
Q ss_pred C-------Ccccch-hhhhhhhhcccCCCCccccccC
Q psy5522 1251 G-------LVEDTL-PILTWLVTQQNDQGGFASTQMS 1279 (1397)
Q Consensus 1251 ~-------~~~~a~-~i~~Wl~~q~n~~Ggf~stQdT 1279 (1397)
+ .+..|. .+++||.+||++.|+|...=-|
T Consensus 195 ~~~~~~~~~i~~al~~l~~~l~~~Q~~dG~FGN~~ST 231 (414)
T 2bb6_A 195 NLNPKQRNRINLALKRVQEKILKAQTPEGYFGNVYST 231 (414)
T ss_dssp TSCGGGHHHHHHHHHHHHHHHHHTBCTTSCBSSTTTH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhcCCCCccchhhH
Confidence 1 144444 4669999999999999754444
No 59
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.26 E-value=1.7 Score=41.44 Aligned_cols=70 Identities=4% Similarity=0.075 Sum_probs=54.4
Q ss_pred ccCCceeEEEEEEEcCCCccC--CCcceEEEEECCCC--CeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 109 YKPGDLVRFRAIVLNSHLKPS--VTGALEIFITDGKG--NRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 109 YkPGqtV~fRvv~ld~~l~P~--~~~~~~v~I~DP~g--~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
+..|+...|.+-++|.+-++. ....+.+.|.+|++ ..+. -......+|.+..+|.... .|.|+|.+..++
T Consensus 24 ~~~g~~~~F~V~~~d~~G~~~~~Gg~~~~v~i~~p~~~~~~~~-~~v~D~~dGty~v~y~p~~---~G~y~i~V~~~g 97 (113)
T 2ds4_A 24 AREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDKKDSPVR-TMVQDNKDGTYYISYTPKE---PGVYTVWVCIKE 97 (113)
T ss_dssp EETTCCEEEEEECBBTTSSBCCCCCCCEEEEEEESSCSSCCCE-EEEECCSSSEEEEEEECSS---SEEEEEEEEESS
T ss_pred eecCCcEEEEEEEECCCCCCcccCCceEEEEEEecCCCCceeE-EEEEECCCCEEEEEEEeCC---CeEEEEEEEECC
Confidence 568899999999999887664 34578999999986 3332 2345667899999998655 399999999886
No 60
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=84.59 E-value=10 Score=47.01 Aligned_cols=121 Identities=16% Similarity=0.121 Sum_probs=88.4
Q ss_pred EEEEEEEEeCCCceeeeeCCeeEEEeeeEEEEecCCceeeeCCEEEEEEEEEcCCCccEE-EEEEEeecCCeeeeecCCC
Q psy5522 687 WVLSAFSVDSLYGLGLMDMPKKLRVFRPFFISLDLPYSVMRGEVVAIPVVVFNYLSQDLV-ADVTLENVGQFDFADFSNE 765 (1397)
Q Consensus 687 W~~~Afa~s~~~G~G~a~~~~~l~vfkpffv~l~LPysv~rGE~~~l~~~VfNyl~~~~~-v~v~L~~s~~~~~~~~~~~ 765 (1397)
-++.|+|.-++++.-++ ....+...+|- |.+.+|-..+.|+.+.+.++..|=|+..++ ..++++.+.-..
T Consensus 559 i~~~a~~~v~et~~~~~-~~~di~l~~P~-l~I~v~g~~~v~~~l~a~vsf~NPL~~~L~~c~~~vEG~GL~~------- 629 (695)
T 1g0d_A 559 IRVKALLDAPGENGPIM-TVANIPLSTPE-LLVQVPGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAGLLS------- 629 (695)
T ss_dssp EEEEEEEECCC---EEE-EEEEEECBCCC-CEEECCSCEETTCCEEEEEEEECCSSSCEESCEEEEEETTTEE-------
T ss_pred EEEEEEEEECCCCeEEE-EEEEEEEcCCC-EEEEeCCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCc-------
Confidence 46677777766665444 24677777776 678889889999999999999999999887 455777664221
Q ss_pred ccCCCCCCcceeeeEEE--EEeCCCeeEEEEEEEeceeeeEEEEEEEEeCCCCcee-EEEEEecC
Q psy5522 766 VDAAPQPKFEVFRRKKL--TIKANSGSTTTFVITPKELGYIGIKVTATSNLAGDSM-EGKLLVKP 827 (1397)
Q Consensus 766 ~~~~~~~~~~~~~~~~~--~v~a~~~~tv~f~v~p~~lG~v~itV~A~~~~~~D~v-~k~L~V~p 827 (1397)
.....+ .|.+++...+.+.++|.+.|.-.+.+.-.+....|-- .+.+.|.+
T Consensus 630 -----------~~~~~~~~~v~Pg~~~~~~~~~~P~~~G~r~L~a~f~s~~l~~v~G~~~v~V~~ 683 (695)
T 1g0d_A 630 -----------ATQIHVNGAVAPSGKVSVKLSFSPMRTGVRKLLVDFDSDRLKDVKGVTTVVVHK 683 (695)
T ss_dssp -----------EEEEECSSEECTTCEEEEEEEECCSSCEEEEEEEEEECSSCCCEEEEEEEEEEC
T ss_pred -----------ceEEecCCCcCCCCEEEEEEEEEcCCccceEEEEEEECCcccCcEeEEEEEEee
Confidence 123334 7899999999999999999999998888877665533 35666665
No 61
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=83.37 E-value=2.3 Score=39.67 Aligned_cols=64 Identities=16% Similarity=0.145 Sum_probs=47.5
Q ss_pred cCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 110 KPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 110 kPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
+.|+...|.|-+.+. ....+.|.|.+|+|..+. -.......|.+.-+|. |.+ .|.|+|.+..++
T Consensus 22 ~vg~~~~F~V~~~~a-----G~~~l~v~i~~~~g~~~~-~~v~d~~dGty~V~Y~-p~~--~G~y~i~V~~~g 85 (100)
T 3rgh_A 22 TAGEVGQFQVDCSSA-----GSAELTIEICSEAGLPAE-VYIQDHGDGTHTITYI-PLC--PGAYTVTIKYGG 85 (100)
T ss_dssp ETTSCEEEEEECTTS-----CSCCEEEEEECTTSCBCE-EEEEECSSSEEEEEEE-CCS--SEEEEEEEEETT
T ss_pred EcCCcEEEEEEECCC-----CCceEEEEEECCCCCEeE-EEEEeCCCCEEEEEEE-eCC--CeeEEEEEEECC
Confidence 356666776665552 356789999999997654 3445677899999999 444 499999999987
No 62
>2bb6_A TCII, TC II, transcobalamin II; alpha_6 - alpha_6 barrel, transport protein; HET: B12; 2.00A {Bos taurus} PDB: 2bbc_A* 2v3n_A* 2v3p_A* 2bb5_A*
Probab=82.85 E-value=1.8 Score=50.76 Aligned_cols=97 Identities=14% Similarity=0.085 Sum_probs=63.4
Q ss_pred chHHHHHHHHHHhc--cccHHHHHHHHHHHHhccccceeeecCCCCccccCCCCCCCCcchhHHHHHHHHHccCCCccCH
Q psy5522 902 VPNIVVLEYLKKTY--QLTDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFRQAASHTTIDE 979 (1397)
Q Consensus 902 ~p~i~~l~yL~~~~--~l~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl~~~~~a~~~i~vd~ 979 (1397)
|-.+.++.=+...+ .-..+...+|++++.++ ++.-|.+||+| |++.-|+.|+.+|..+.....-..
T Consensus 182 AMA~lAL~C~~~~~~~~~~~~~i~~al~~l~~~---l~~~Q~~dG~F---------GN~~ST~lA~QAL~~~~~~~~~~~ 249 (414)
T 2bb6_A 182 AMAGMAFSCLELSNLNPKQRNRINLALKRVQEK---ILKAQTPEGYF---------GNVYSTPLALQLLMGSLRPSVELG 249 (414)
T ss_dssp HHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHH---HHHTBCTTSCB---------SSTTTHHHHHHHHTTCSSCCHHHH
T ss_pred HHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHH---HHHhhcCCCCc---------cchhhHHHHHHHHHhcCCCccccc
Confidence 33444554444432 12244566888777764 45568899987 256669999999998865422222
Q ss_pred HHHHHHHHHHHhcccCCCccccchH---hHHHhhc
Q psy5522 980 SVILEALAWLSSNQAVNGSFPEVGK---VSHADMQ 1011 (1397)
Q Consensus 980 ~~~~~~~~WL~~~q~~~G~F~stqd---vl~al~~ 1011 (1397)
....++++||.+ |..+|+|...-. ++.+|..
T Consensus 250 w~~~~a~~~Ll~-q~~dG~F~np~ataQ~lpaL~g 283 (414)
T 2bb6_A 250 TACLKAKAALQA-SLQHKTFQNPLMISQLLPVLNQ 283 (414)
T ss_dssp HHHHHHHHHHHH-HHTTTCCCSHHHHHHHHHHTTT
T ss_pred chHHHHHHHHHH-hccCCCCCChHHHHHHHHHhcC
Confidence 356679999998 899999985432 3666655
No 63
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=82.75 E-value=6.7 Score=37.49 Aligned_cols=73 Identities=15% Similarity=0.200 Sum_probs=53.9
Q ss_pred CCceeeeCCEEEEEEEEEcCCCcc-EEEEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEE-EEeCCCeeEEEEEEEe
Q psy5522 721 LPYSVMRGEVVAIPVVVFNYLSQD-LVADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKL-TIKANSGSTTTFVITP 798 (1397)
Q Consensus 721 LPysv~rGE~~~l~~~VfNyl~~~-~~v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~a~~~~tv~f~v~p 798 (1397)
-|.++..|+...+.++|-|....+ -...|.|...... + ....+ .|.+|.++++.|...|
T Consensus 11 tP~~~~~~~~~ti~atVkN~G~~~a~~~~V~ly~~g~~-v------------------~t~~v~~LaaG~s~tv~~~w~~ 71 (114)
T 2l0d_A 11 TPVTVVPNTVNTMTATIENQGNKDSTSFNVSLLVDGIV-V------------------DTQTVTSLESENSTNVDFHWTL 71 (114)
T ss_dssp ECSEECTTSEEEEEEEEEECSSSCBCCEEEEEEETTEE-E------------------EEEEESCBCBTCEEEEEEEEEC
T ss_pred cCCCcCCCCeEEEEEEEEECCCCCCCCEEEEEEECCEE-E------------------cceecccccCCCEEEEEEEEee
Confidence 488899999999999999998754 3355555543211 1 12234 5789999999999999
Q ss_pred c-eeeeEEEEEEEEe
Q psy5522 799 K-ELGYIGIKVTATS 812 (1397)
Q Consensus 799 ~-~lG~v~itV~A~~ 812 (1397)
. ..|...|++.+..
T Consensus 72 ~~~~G~ytl~a~VD~ 86 (114)
T 2l0d_A 72 DGTANSYTLTVNVDP 86 (114)
T ss_dssp CCSCSEEEEEEEECT
T ss_pred cCcCceEEEEEEECC
Confidence 8 5899988887753
No 64
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=81.86 E-value=29 Score=36.78 Aligned_cols=150 Identities=15% Similarity=0.130 Sum_probs=89.1
Q ss_pred ecCCeEEEEEEeecCC------ccEEEEEEEEeecCCCCeeEEeEEEEECCCceeEEEEEcCCCCCceeEEEEEecCcee
Q psy5522 11 RPNGEYHVAVSTQAVS------EATQVSVEVGGKQDSGGEFRTKQLLSVDPFSTRIVKLDIGDLGPGQYNLTVKGSGSLN 84 (1397)
Q Consensus 11 r~g~~~~v~v~l~~~~------~~v~v~v~L~~~~~~~~~~~~~~~~~~~~~~~~~~~f~vP~~~~~~~~l~v~g~~~~~ 84 (1397)
..|.+..+.|+..+.+ +.-.++|.+.++. + ..+.-.+.-..+....+.|..+ ..|.|.|.|+-. +..
T Consensus 20 ~~g~~~~F~V~~~D~~G~~~~~G~~~~~v~i~~p~--g--~~~~~~v~d~~dGty~v~y~p~--~~G~~~i~V~~~-g~~ 92 (212)
T 1qfh_A 20 FDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGPD--G--LVVDAKVTDNNDGTYGVVYDAP--VEGNYNVNVTLR-GNP 92 (212)
T ss_dssp ETTSCEEEEEECBBSSSCBCSSCCCCEEEEEECGG--G--CEECCEEEECSSSEEEEEECCC--SSEEEEEEEEET-TEE
T ss_pred ecCCcEEEEEEEEcCCCCEeecCCCeEEEEEECCC--C--CEeeeEEEECCCcEEEEEEECc--CcEEEEEEEEEC-CEe
Confidence 4677778888876432 1224666666541 2 1222233223444555666542 356788888763 322
Q ss_pred eEeeE-EEEEEec--ccEEEEEcCCCcccCCceeEEEEEEEcCCCccC--CCcceEEEEECCCCCeEEeeeeeccCCcee
Q psy5522 85 FYNST-GLVYVHK--SYSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPS--VTGALEIFITDGKGNRIKQWTRALTTRGVF 159 (1397)
Q Consensus 85 f~~~~-~v~~~~~--~~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~--~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~ 159 (1397)
...+- .+.+... ...+-+ +...|.+.++|...+|. ....+.+.|.+|.| .+. -......+|.+
T Consensus 93 i~gSPf~v~v~~~~~~~~~~~----------~~~~f~V~~~D~~G~~~~~G~~~l~v~i~~p~g-~~~-~~v~d~~dGty 160 (212)
T 1qfh_A 93 IKNMPIDVKCIEGANGEDSSF----------GSFTFTVAAKNKKGEVKTYGGDKFEVSITGPAE-EIT-LDAIDNQDGTY 160 (212)
T ss_dssp CBTCSEEEEEECCCCGGGCEE----------EEEEEEEECBCTTSSBCSSCCCCEEEEEEECCS-EEE-EEEEECSSSEE
T ss_pred cCCCcceEEEccCCCCCceEE----------EEEEEEEEEeccCCCEeecCCCcEEEEEECCCC-cee-eEEEECCCCEE
Confidence 21110 1222211 011111 67788888888766554 35789999999999 443 23456778999
Q ss_pred eeeeecCCCCCCeeEEEEEEEcC
Q psy5522 160 SADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 160 ~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
..+|.+.. .|.|+|.+..++
T Consensus 161 ~v~y~p~~---~G~y~v~V~~~g 180 (212)
T 1qfh_A 161 TAAYSLVG---NGRFSTGVKLNG 180 (212)
T ss_dssp EEEEEEES---SEEEEEEEEETT
T ss_pred EEEEEcCC---CEEEEEEEEECC
Confidence 99998755 499999999987
No 65
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=81.32 E-value=81 Score=36.00 Aligned_cols=104 Identities=11% Similarity=0.052 Sum_probs=57.8
Q ss_pred EEEEEEecccEEEEEcCCCcccCCceeEEEEEEEcC-CCccCCCcceEEEEEC------CCCCeEE-----eeeee--cc
Q psy5522 89 TGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNS-HLKPSVTGALEIFITD------GKGNRIK-----QWTRA--LT 154 (1397)
Q Consensus 89 ~~v~~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~-~l~P~~~~~~~v~I~D------P~g~~I~-----qw~~~--~~ 154 (1397)
+.+.+....+. ...-|+|.|||+|.=+|...-. +-++..-..+.|++.. .+++.+. .|... ..
T Consensus 27 ~~~~~~~~~~~---~~~~pvY~~GE~VsG~V~I~~~~~~k~l~h~GIki~~~G~~e~~~~~~~~~~f~~~~~eL~~pG~L 103 (340)
T 2r51_A 27 KRAEHKTEDGK---KEKYFLFYDGETVSGKVSLSLKNPNKRLEHQGIKIEFIGQIELYYDRGNHHEFVSLVKDLARPGEI 103 (340)
T ss_dssp CEEEEECTTSC---EEEEEEEETBCCEEEEEEEEESSTTSCEEESCEEEEEEEEEEEGGGTTCCEEEEEEEEEEECSEEE
T ss_pred ceEEeecCCCc---EeecCcCCCCCEEEEEEEEEECCCCCeeEEEEEEEEEEEEEEEEecCCCcEEEEEEEEEecCCCcc
Confidence 44455544433 2345899999999999876443 3333322344444431 1222221 22210 11
Q ss_pred CCc-eeeeeeecCCCCCC---e-----eEEEEEEEcC----eEEEEEEEEeeec
Q psy5522 155 TRG-VFSADLQLSKSPVL---G-----DWNITINVLD----QKFTKRFTVAEYV 195 (1397)
Q Consensus 155 ~~G-i~~~sf~L~~~~~l---G-----~y~I~v~~~~----~~~~~~F~VeEYv 195 (1397)
..| -|.++|+||+.+.. | .|.|+|...- ...++.|.|..+-
T Consensus 104 ~~G~~fpF~F~lp~~l~eSy~G~~g~IrY~vkv~i~Rp~~di~~~~eF~V~~~~ 157 (340)
T 2r51_A 104 TQSQAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLNDVVKEMDIVVHTLS 157 (340)
T ss_dssp CSCEEEEEEECSBCCCSCCEECSSEEEEEEEEEEECCSSCCEEEEEEEEEECCC
T ss_pred CCCcEEeeEeCCCCCCCcCeEeeeEEEEEEEEEEEEecCCCceEEEEEEEEeCC
Confidence 122 27778899876552 3 4788888753 4568899998763
No 66
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=80.99 E-value=1.2 Score=51.86 Aligned_cols=85 Identities=14% Similarity=0.155 Sum_probs=50.1
Q ss_pred ccHHHHHHHHHHHHhccccceeeecC-CCCccccCCCCCCC---------------CcchhHHHHHHHHHccCCCccCHH
Q psy5522 917 LTDAIEAKASRYLETGYQQELTYRRP-DGSFSAFGTTDPNG---------------STWLTAFVAKSFRQAASHTTIDES 980 (1397)
Q Consensus 917 l~~~~~~~a~~~l~~gy~~~l~y~~~-dGsfs~~~~~~~~~---------------s~wlTAyvl~~~~~a~~~i~vd~~ 980 (1397)
++++++.++..-++.|+.-+|.-|.. ||++-.|+.+-..+ +.--|+.+++.++....--.-...
T Consensus 235 ~~~~~~~~~~~av~Rgi~~Ll~~Qe~~dGsw~rWg~qY~ygT~~Pa~aRsYE~psLs~~esa~il~~LM~~~~~~~~~~~ 314 (408)
T 1r76_A 235 VPPAIRTRALEATNAAIHCIVETQVVQDGKRLGWGQQHDALTLRPTSARNFEPAALSSTESARILLFLMEIEAPSDAVKQ 314 (408)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCSBCCCSTTCCSCEEHHHHHHHHHHHTTSSSCCHHHHH
T ss_pred cchhhhhhHHHHHHHHHHHHHHhhcccCCcccchhcccccccCcchhhhccCCccccHHHHHHHHHHHccCCCCCHHHHH
Confidence 34555555555566666666667777 99988887632111 111256677777655431011123
Q ss_pred HHHHHHHHHHhcccCCCcccc
Q psy5522 981 VILEALAWLSSNQAVNGSFPE 1001 (1397)
Q Consensus 981 ~~~~~~~WL~~~q~~~G~F~s 1001 (1397)
.+.+++.||.+.|+.+|++.+
T Consensus 315 aI~~Av~WL~s~Q~~dg~w~~ 335 (408)
T 1r76_A 315 AIRGGVAWLNTSVIRDRAWVK 335 (408)
T ss_dssp HHHHHHHHHHHSCCCC-----
T ss_pred HHHHHHHHHHHhhcCCCceee
Confidence 589999999999999999974
No 67
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=80.85 E-value=19 Score=45.02 Aligned_cols=141 Identities=15% Similarity=0.003 Sum_probs=98.6
Q ss_pred eccCceEEEEEEcCC-----cc---ccEEEEEEEEeCCCceeeeeCCeeEEEeeeEEEEecCCceeeeCCEEEEEEEEEc
Q psy5522 668 TGFDGKVMVNEKVPD-----SI---TSWVLSAFSVDSLYGLGLMDMPKKLRVFRPFFISLDLPYSVMRGEVVAIPVVVFN 739 (1397)
Q Consensus 668 ~~~~G~a~v~~tvPD-----ti---T~W~~~Afa~s~~~G~G~a~~~~~l~vfkpffv~l~LPysv~rGE~~~l~~~VfN 739 (1397)
+++....+++++|+= .+ .--++.|+|.-++++.-++ ....+...+|- |.+.+|-..+.|+.+.+.++..|
T Consensus 577 L~p~~~~~i~~~i~y~~Y~~~L~d~~~i~~~a~~~v~et~~~~~-~~~di~l~~P~-l~I~v~g~~~v~~~l~v~vsf~N 654 (731)
T 1ex0_A 577 LEPLSFKKEAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLA-KQKSTVLTIPE-IIIKVRGTQVVGSDMTVTVQFTN 654 (731)
T ss_dssp ECTTEEEEEEEEECHHHHTTTCCTTCEEEEEEEEEETTTCCEEE-EEEEEECBCCC-CEEEEEECCBTTSCEEEEEEEEC
T ss_pred ECCCceEEEEEEECHHHHhhhccCCCEEEEEEEEEECCCCeEEE-EEEEEEEeCCC-EEEEeCCCcccCCeEEEEEEEEC
Confidence 455555555554441 12 3357788888877675333 23777777776 67778888899999999999999
Q ss_pred CCCccEEE-EEEEeecCCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeEEEEEEEeceeeeEEEEEEEEeCCCCce
Q psy5522 740 YLSQDLVA-DVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNLAGDS 818 (1397)
Q Consensus 740 yl~~~~~v-~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~p~~lG~v~itV~A~~~~~~D~ 818 (1397)
-|+..++= .++++.+.-..- ....--.|.+++...+.+.++|.+.|.-.|.+.-.+....|-
T Consensus 655 PL~~~L~~c~~~vEG~GL~~~-----------------~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~a~f~s~~l~~v 717 (731)
T 1ex0_A 655 PLKETLRNVWVHLDGPGVTRP-----------------MKKMFREIRPNSTVQWEEVCRPWVSGHRKLIASMSSDSLRHV 717 (731)
T ss_dssp CSSSCEEEEEEEEEETTTEEE-----------------EEEEEEEECTTCEEEEEEEECCSSCEEEEEEEEEECSSCCCE
T ss_pred CCCCcccceEEEEECCCCCce-----------------eeEecCccCCCCEEEEEEEEEeccccceEEEEEEECCcccCc
Confidence 99999874 457776643211 111223699999999999999999999999888887765553
Q ss_pred e-EEEEEecC
Q psy5522 819 M-EGKLLVKP 827 (1397)
Q Consensus 819 v-~k~L~V~p 827 (1397)
- .+.+.|.+
T Consensus 718 ~G~~~v~V~~ 727 (731)
T 1ex0_A 718 YGELDVQIQR 727 (731)
T ss_dssp EEEEEEEEBC
T ss_pred EeEEEEEEcc
Confidence 3 25566654
No 68
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=79.71 E-value=3.5 Score=39.50 Aligned_cols=63 Identities=21% Similarity=0.220 Sum_probs=47.7
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.|+..+|-+-++|. ....+.+.|.+|+|..+.- .......|.+..+|.... + |.|+|.+..++
T Consensus 28 ~~~~~~F~V~~~da-----G~~~l~V~v~~p~g~~~~~-~v~d~~dGty~v~Y~p~~-~--G~y~i~V~~~g 90 (115)
T 2d7m_A 28 ASLPVEFTIDARDA-----GEGLLTVQILDPEGKPKKA-NIRDNGDGTYTVSYLPDM-S--GRYTITIKYGG 90 (115)
T ss_dssp SSSCEEEEEEESSS-----CSSCEEEEEECTTSCBCCE-EEEECSSSCEEEEECCCS-C--EEEEEEEEESS
T ss_pred cCCcEEEEEEECCC-----CCCEEEEEEECCCCCeeee-EEEECCCCEEEEEEEeCC-C--ceEEEEEEECC
Confidence 57777788777775 2456889999999875532 334567899999997444 3 99999999987
No 69
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=77.36 E-value=3.7 Score=39.97 Aligned_cols=63 Identities=14% Similarity=0.170 Sum_probs=48.0
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.|+...|.+-++|. ....+.+.|.+|+|.++.- .......|.+...|.... .|.|+|.+..++
T Consensus 27 vg~~~~F~V~a~da-----G~~~l~V~I~~p~g~~v~~-~v~d~~dGty~V~Y~p~~---~G~y~I~V~~~g 89 (124)
T 2dmb_A 27 TGEEVGFVVDAKTA-----GKGKVTCTVLTPDGTEAEA-DVIENEDGTYDIFYTAAK---PGTYVIYVRFGG 89 (124)
T ss_dssp SSSEEEEEEECSSS-----CSCCEEEEEECTTSCBCCC-EEEECTTSCEEEEEECSS---CEEEEEEEEESS
T ss_pred cCCcEEEEEEEecC-----CCCcEEEEEECCCCCEEee-EEEeCCCCEEEEEEEcCC---CEEEEEEEEECC
Confidence 57777777777663 3567889999999976542 234567899999999664 399999999987
No 70
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=77.20 E-value=73 Score=33.10 Aligned_cols=161 Identities=13% Similarity=0.034 Sum_probs=92.6
Q ss_pred EEEEeCCCc--eEeeCCeEEEEEEEEEecCccccceEEEEEEeccccCccccccccceeEEeecCceEEEEEechhhhcc
Q psy5522 200 EVNVNVPPH--ATFKDSKVVISVNAKYTYGKPVKGEATITAYPTIFSGVIQPLFQTPVRKVVPIDGKTVIEFDVVKELQL 277 (1397)
Q Consensus 200 eV~v~~p~~--i~~~~~~~~v~v~AkYtyGkPV~G~v~v~v~~~~~~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~ 277 (1397)
||.|..|.. .+..++.+.+.+.|. --| |-..|.++... . . ...+..+..++.+....
T Consensus 1 ~V~ItsP~~g~~~~~g~~vtv~~~As-~d~----~V~~Ve~~~dg---~-------~--v~~~t~~~ys~~~~~~~---- 59 (190)
T 3pdd_A 1 MVTIDSPVAGERFEAGKDINISATVK-SKT----PVSKVEFYNGD---T-------L--ISSDTTAPYTAKITGAA---- 59 (190)
T ss_dssp CEEEEESCTTCEEETTSCEEEEEEEC-CSS----CEEEEEEEETT---E-------E--EEEECSSSEEEEECSCC----
T ss_pred CeEEecCCCCCEEcCCCeEEEEEEEe-CCC----CEEEEEEEECC---E-------E--EccccCCceEEEeccCC----
Confidence 577777764 233466788888876 332 33345554321 0 1 11223344555554311
Q ss_pred ccccceEEEEEEEEEECCcceE-EeeEEEEEEE-EeeeEEEEEe--cCCcccCCCeEEEEEEEEccCCCccCCCCceEEE
Q psy5522 278 TDEYERNIHFDVAVEEALTGRR-QNNTGSVVFH-KHKYKMDLIK--SSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQV 353 (1397)
Q Consensus 278 ~~~~~~~l~V~a~VtE~gTG~~-~~~~~~i~i~-~~~~~i~f~~--~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v 353 (1397)
.....|.|..+|.. |.. .+....+.+. ..+-.+.+.. ....+..|....+...+.|.+|. +. .|.+
T Consensus 60 ----~G~htlta~A~D~a-Gn~s~s~~v~vtV~~~~~Ptv~itsP~~g~~~~~~~~vtl~~~AsD~~g~-V~----~Ve~ 129 (190)
T 3pdd_A 60 ----VGAYNLKAVAVLSD-GRRIESPVTPVLVKVIVKPTVKLTAPKSNVVAYGNEFLKITATASDSDGK-IS----RVDF 129 (190)
T ss_dssp ----SEEEEEEEEEEETT-SCEEECCCEEEEEECCCCCEEEEEECCTTCCCBTTSEEEEEEEEECSSSC-EE----EEEE
T ss_pred ----CccEEEEEEEEECC-CCEeeecceeEEeccCCCCceeecCCCCCcEEecCCeEEEEEEEECCCCc-EE----EEEE
Confidence 24667788888876 554 3344666666 4444555443 22356678888999999988884 32 4655
Q ss_pred EEeeeccccccceeeEeeCCCeeEEEEEeCCCCCceeEEEEEEEecCcc
Q psy5522 354 RHGFSYDESKYEANQYKLDRNGMIKLVYYPPANENVTTLGIEAEYLDIK 402 (1397)
Q Consensus 354 ~~~~~~~~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~a~~~~~~ 402 (1397)
+++. ....++..+...|...+ ..+.|.|+++|.+..+.
T Consensus 130 ~~dg---------~~v~t~t~~~y~~~~~~--~~G~~tl~a~A~D~aGn 167 (190)
T 3pdd_A 130 LVDG---------EVIGSDREAPYEYEWKA--VEGNHEISVIAYDDDDA 167 (190)
T ss_dssp EETT---------EEEEEECSSSEEEEEEC--CSEEEEEEEEEEETTCC
T ss_pred EECC---------EEEecccCCCEEEEEec--CCeeEEEEEEEEECCCC
Confidence 5421 12234455666777777 34678888888887654
No 71
>2pmv_A Gastric intrinsic factor; cobalamin transport protein alpha6-alpha6 motif two domain P transport protein; HET: NAG B12; 2.60A {Homo sapiens} PDB: 3kq4_A*
Probab=76.96 E-value=1.1 Score=52.12 Aligned_cols=83 Identities=11% Similarity=0.035 Sum_probs=61.3
Q ss_pred CchHHHHHHHHHHhhCCCCchHHHHHHHhhcccccCCcccccccCCCCCCCCCCCCCCCcccchhhHHHHHHhh--cc--
Q psy5522 1175 EDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWAQVPNSVDVEMTSYALLSYL--DR-- 1250 (1397)
Q Consensus 1175 ~~~y~~al~aYal~la~~~~~~~~~~~L~~~a~~~~~~~~W~~~~~~~~~~~~~~~~~~s~~vE~t~Y~lL~~~--~~-- 1250 (1397)
.+.|..||..-||.+.|.........+|...+..+ | .+.+|-++|-|.||+. .+
T Consensus 112 t~~Yq~sL~vLALC~~~~~v~~~~v~kLl~~~~~~-g---------------------~~~sVDT~AMa~LAL~C~~~~~ 169 (399)
T 2pmv_A 112 SAFYGPSLAILALCQKNSEATLPIAVRFAKTLLAN-S---------------------SPFNVDTGAMATLALTCMYNKI 169 (399)
T ss_dssp GGGHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-C---------------------SCCCHHHHHHHHHHHHHHHTBC
T ss_pred ccchhHHHHHHHHHhcCCCCCHHHHHHHHHHHHcc-C---------------------CcccchHHHHHHHHHHHHhhcc
Confidence 46799999999999999888777777776555433 1 1357889999999976 23
Q ss_pred -CC--------cccc-hhhhhhhhhcccCCCCccccccC
Q psy5522 1251 -GL--------VEDT-LPILTWLVTQQNDQGGFASTQMS 1279 (1397)
Q Consensus 1251 -~~--------~~~a-~~i~~Wl~~q~n~~Ggf~stQdT 1279 (1397)
.+ +..| ..++++|.+||++.|+|...=-|
T Consensus 170 ~~~~~~~~~~~i~~ai~~~~~~l~~~q~~dG~fGn~yST 208 (399)
T 2pmv_A 170 PVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYST 208 (399)
T ss_dssp CTTCCSSHHHHHHHHHHHHHHHHTTSBCTTSCBSSHHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHhhcCCCcccccccH
Confidence 12 2333 35889999999999999855555
No 72
>3dra_B Geranylgeranyltransferase type I beta subunit; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=76.51 E-value=6.4 Score=45.98 Aligned_cols=107 Identities=14% Similarity=0.092 Sum_probs=65.3
Q ss_pred cCCCchhhhhcccchHHHHHHHHHHhccc--cHHHHHHHHHHHHhccccceeeecCCCCccccC-----CCC-CCCCcch
Q psy5522 889 MPFGCGEQNMLNFVPNIVVLEYLKKTYQL--TDAIEAKASRYLETGYQQELTYRRPDGSFSAFG-----TTD-PNGSTWL 960 (1397)
Q Consensus 889 ~P~GCgEQ~m~~~~p~i~~l~yL~~~~~l--~~~~~~~a~~~l~~gy~~~l~y~~~dGsfs~~~-----~~~-~~~s~wl 960 (1397)
+|..-..+-.+++.-.-+.+.-|.--+.+ .++.+++.++++.+- +..-+...|+|.... +.+ ..++++.
T Consensus 20 Lp~~~~s~D~~R~~l~Yw~l~~L~lLg~~~~~~~~~~~~i~~i~~~---q~~~~~~~gGF~g~~~~~~~g~~~~~~hl~~ 96 (390)
T 3dra_B 20 LPSTAQSEDSNKLAIIYFCLHGLQLIQKFQFTNQELIYYRNFIINQ---FMIENNQIISFRSTHYFQKTNQKYDCPNLSS 96 (390)
T ss_dssp CCGGGGGGTTCHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHH---HEEECSSCEEECSSGGGGGSCTTTSCCBHHH
T ss_pred CCcchhhcchhhHHHHHHHHHHHHHhCCCccchHHHHHHHHHHHHH---hccccCCCCCcCCCccCCCCCCccCcccHHH
Confidence 55543334444655555565555555554 566667777777542 111233457776552 111 2578899
Q ss_pred hHHHHHHHHHccCC--CccCHHHHHHHHHHHHhccc---C-CCcccc
Q psy5522 961 TAFVAKSFRQAASH--TTIDESVILEALAWLSSNQA---V-NGSFPE 1001 (1397)
Q Consensus 961 TAyvl~~~~~a~~~--i~vd~~~~~~~~~WL~~~q~---~-~G~F~s 1001 (1397)
|=+|+.+|...+.- -.||. .++++||.+-|+ + +|+|..
T Consensus 97 Ty~Al~~L~ilg~~~~~~vdr---~~i~~~l~~lQ~~~~~~dGsF~~ 140 (390)
T 3dra_B 97 TLFALYNLLILKSPYHTIINR---KKIMNFLCKCQVKDGINKGGFVP 140 (390)
T ss_dssp HHHHHHHHHHTTCCGGGTCCH---HHHHHHHHHHBCCSSTTTTCBCS
T ss_pred HHHHHHHHHHhCchhhccccH---HHHHHHHHHHhCCCCCCCCceee
Confidence 99999999877653 23554 456999998776 5 899984
No 73
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=75.67 E-value=3.9 Score=39.06 Aligned_cols=63 Identities=10% Similarity=0.079 Sum_probs=49.0
Q ss_pred cCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 110 KPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 110 kPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
+.|+...|.+-..+.+ ..+.+.|.+|+|..+.- .......|.+..+|. |.+ .|.|+|.+..++
T Consensus 25 ~vg~~~~F~V~~~~a~------g~l~v~V~~P~g~~~~~-~v~d~~~gty~v~yt-P~~--~G~h~v~V~~~g 87 (112)
T 2d7p_A 25 KVNQPASFAVQLNGAR------GVIDARVHTPSGAVEEC-YVSELDSDKHTIRFI-PHE--NGVHSIDVKFNG 87 (112)
T ss_dssp CTTCCEEEEEECTTCC------SCEEEEEECSSSCBCCC-EECSCBTTEEEEEEC-CSS--CEEEEEEEEESS
T ss_pred ccCCcEEEEEEeCCCC------CCEEEEEECCCCCeeee-EEEeCCCCeEEEEEE-cCC--CEeEEEEEEECC
Confidence 6788888888776642 47889999999986542 345567899999994 554 499999999987
No 74
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=75.37 E-value=1.6e+02 Score=36.61 Aligned_cols=140 Identities=8% Similarity=0.091 Sum_probs=87.2
Q ss_pred EEEEEeCCCceEeeCCeEEEEEEEEEecCccccceEEEEEEeccccCccccccc-cceeEEeecCceEEEEEechh-hhc
Q psy5522 199 FEVNVNVPPHATFKDSKVVISVNAKYTYGKPVKGEATITAYPTIFSGVIQPLFQ-TPVRKVVPIDGKTVIEFDVVK-ELQ 276 (1397)
Q Consensus 199 FeV~v~~p~~i~~~~~~~~v~v~AkYtyGkPV~G~v~v~v~~~~~~g~~~~~~~-~~~~~~~d~~G~~~~~~~~~~-~~~ 276 (1397)
.+++++....+. .|+.|.+.++.+-....+-.-++.+.+...++.|.....+. ..+.-++..+..-.+.+.+.- +..
T Consensus 482 v~~~~~~~~~~~-~G~df~v~l~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~~i~y~~Y~ 560 (692)
T 1vjj_A 482 IIGKLKVAGMLA-VGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISYAQYE 560 (692)
T ss_dssp EEEEEEECSCCB-TTSCEEEEEEEEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECHHHHH
T ss_pred eEEEEEcCCCCC-CCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEEEECHHHHh
Confidence 445555544443 47888888888877776533333333333344444322221 122344555555555544322 011
Q ss_pred ccccc--ceEEEEEEEEEECCcceEEeeEEEEEEEEeeeEEEEEecCCcccCCCeEEEEEEEEccCCCccC
Q psy5522 277 LTDEY--ERNIHFDVAVEEALTGRRQNNTGSVVFHKHKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVT 345 (1397)
Q Consensus 277 ~~~~~--~~~l~V~a~VtE~gTG~~~~~~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~ 345 (1397)
+.+ ...+++.|..+...|+. ..+...+.+.....+|+....+ +-|.+..+.|.++||=..|+.
T Consensus 561 --~~L~d~~~i~~~a~~~v~et~~-~~~~~di~l~~P~l~I~v~g~~---~v~~~l~v~v~f~NPL~~~L~ 625 (692)
T 1vjj_A 561 --RYLKSDNMIRITAVCKVPDESE-VVVERDIILDNPTLTLEVLNEA---RVRKPVNVQMLFSNPLDEPVR 625 (692)
T ss_dssp --TTCCTTCEEEEEEEEECTTSCC-EEEEEEEECBCCCEEEEECSCC---BTTSCEEEEEEEECCSSSCBC
T ss_pred --hhcccCCeEEEEEEEEECCCce-EEEEEEEEEcCCCEEEEeCCCc---ccCCeEEEEEEEECCCCCccc
Confidence 112 35678888888888888 8888999888888888765443 569999999999999999987
No 75
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=75.35 E-value=19 Score=44.79 Aligned_cols=113 Identities=13% Similarity=0.110 Sum_probs=85.3
Q ss_pred EEEEEEEEeCCCceeeeeCCeeEEEeeeEEEEecCCceeeeCCEEEEEEEEEcCCCccEE-EEEEEeecCCeeeeecCCC
Q psy5522 687 WVLSAFSVDSLYGLGLMDMPKKLRVFRPFFISLDLPYSVMRGEVVAIPVVVFNYLSQDLV-ADVTLENVGQFDFADFSNE 765 (1397)
Q Consensus 687 W~~~Afa~s~~~G~G~a~~~~~l~vfkpffv~l~LPysv~rGE~~~l~~~VfNyl~~~~~-v~v~L~~s~~~~~~~~~~~ 765 (1397)
-++.|+|.-++++. ++ ....+...+|- |.+.+|-..+.|+.+.+.++..|-|+..++ ..++++.+.-..
T Consensus 569 i~~~a~~~v~et~~-~~-~~~di~l~~P~-l~I~v~g~~~v~~~l~v~v~f~NPL~~~L~~c~~~vEG~GL~~------- 638 (692)
T 1vjj_A 569 IRITAVCKVPDESE-VV-VERDIILDNPT-LTLEVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLL------- 638 (692)
T ss_dssp EEEEEEEECTTSCC-EE-EEEEEECBCCC-EEEEECSCCBTTSCEEEEEEEECCSSSCBCSEEEEEECTTTSS-------
T ss_pred EEEEEEEEECCCce-EE-EEEEEEEcCCC-EEEEeCCCcccCCeEEEEEEEECCCCCcccceEEEEECCCCCC-------
Confidence 47788888888788 44 24788888877 688888888999999999999999998876 455666653210
Q ss_pred ccCCCCCCcceeeeEEEEEeCCCeeEEEEEEEeceeeeEEEEEEEEeCCCCce
Q psy5522 766 VDAAPQPKFEVFRRKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNLAGDS 818 (1397)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~p~~lG~v~itV~A~~~~~~D~ 818 (1397)
......--.|.+++...+.+.++|.+.|.-.+.+.-.+...+|-
T Consensus 639 ---------~~~~~~~~~v~pg~~~~~~~~~~P~~~G~r~L~a~f~s~~l~~v 682 (692)
T 1vjj_A 639 ---------GNLKIDVPTLGPKERSRVRFDILPSRSGTKQLLADFSCNKFPAI 682 (692)
T ss_dssp ---------SCEEEEECCBCTTCEEEEEEEECCCSCEEEEEEEEEECSSSTTE
T ss_pred ---------CceEEEcCccCCCCEEEEEEEEEeccccceEEEEEEECCcccCc
Confidence 00011123588999999999999999999999888877765553
No 76
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=74.79 E-value=11 Score=46.98 Aligned_cols=132 Identities=15% Similarity=0.109 Sum_probs=92.8
Q ss_pred eccCceEEEEEEcCC-----cc---ccEEEEEEEEeCCCceeeeeCCeeEEEeeeEEEEecCCceeeeCCEEEEEEEEEc
Q psy5522 668 TGFDGKVMVNEKVPD-----SI---TSWVLSAFSVDSLYGLGLMDMPKKLRVFRPFFISLDLPYSVMRGEVVAIPVVVFN 739 (1397)
Q Consensus 668 ~~~~G~a~v~~tvPD-----ti---T~W~~~Afa~s~~~G~G~a~~~~~l~vfkpffv~l~LPysv~rGE~~~l~~~VfN 739 (1397)
+++....++.++|+= .+ .--++.|+|.-++++.-++ ....+...+|- |.+.+|-..+.|+.+.+.++..|
T Consensus 534 l~p~~~~~v~~~i~y~~Y~~~L~d~~~i~~~a~~~v~et~~~~~-~~~di~l~~P~-l~I~v~g~~~v~~~~~v~v~f~N 611 (687)
T 2q3z_A 534 LEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLL-AERDLYLENPE-IKIRILGEPKQKRKLVAEVSLQN 611 (687)
T ss_dssp ECTTEEEEEEEEECHHHHTTTCCTTCEEEEEEEEEETTTTEEEE-EEEEEECBCCC-CEEEEESCCSSSSCEEEEEEEEC
T ss_pred ECCCceEEEEEEECHHHHhhhccCCCEEEEEEEEEECCCCeEEE-EEEEEEEeCCC-EEEEeCCCcccCCeEEEEEEEEC
Confidence 455555556555441 22 2357788888877776343 23677777776 66777777888999999999999
Q ss_pred CCCccEE-EEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEE--EEeCCCeeEEEEEEEeceeeeEEEEEEEEeCCCC
Q psy5522 740 YLSQDLV-ADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKL--TIKANSGSTTTFVITPKELGYIGIKVTATSNLAG 816 (1397)
Q Consensus 740 yl~~~~~-v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~a~~~~tv~f~v~p~~lG~v~itV~A~~~~~~ 816 (1397)
-|+..++ ..++++.+.-. .......+ .|.+++..++.+.++|.+.|.-.|.+.-.+...+
T Consensus 612 PL~~~L~~c~~~vEG~GL~-----------------~~~~~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L~a~f~s~~l~ 674 (687)
T 2q3z_A 612 PLPVALEGCTFTVEGAGLT-----------------EEQKTVEIPDPVEAGEEVKVRMDLVPLHMGLHKLVVNFESDKLK 674 (687)
T ss_dssp CSSSCBCSEEEEEECTTTC-----------------SSCEEEEECSCBCTTCEEEEEEEECCCSSSCEEEEEEEECSSSC
T ss_pred CCCCcccceEEEEECCCCC-----------------CCceEEecCCCcCCCCEEEEEEEEEeccccceEEEEEEEcCccc
Confidence 9998876 44566665321 01123344 6899999999999999999999998888776655
Q ss_pred ce
Q psy5522 817 DS 818 (1397)
Q Consensus 817 D~ 818 (1397)
|-
T Consensus 675 ~v 676 (687)
T 2q3z_A 675 AV 676 (687)
T ss_dssp CE
T ss_pred Cc
Confidence 43
No 77
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=74.53 E-value=1.8e+02 Score=36.41 Aligned_cols=140 Identities=14% Similarity=0.113 Sum_probs=85.8
Q ss_pred EEEEEeCCCceEeeCCeEEEEEEEEEecCccccceEEEEEEeccccCccccccc-cceeEEeecCceEEEEEechh-hhc
Q psy5522 199 FEVNVNVPPHATFKDSKVVISVNAKYTYGKPVKGEATITAYPTIFSGVIQPLFQ-TPVRKVVPIDGKTVIEFDVVK-ELQ 276 (1397)
Q Consensus 199 FeV~v~~p~~i~~~~~~~~v~v~AkYtyGkPV~G~v~v~v~~~~~~g~~~~~~~-~~~~~~~d~~G~~~~~~~~~~-~~~ 276 (1397)
.+++++. ..+ ..|+.|.+.+..+-....+-.-++.+.+...++.|.....+. ..+.-++..+..-.+.+.+.- +..
T Consensus 518 v~~~i~~-~~~-~iG~df~v~l~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~i~~~i~y~~Y~ 595 (731)
T 1ex0_A 518 VDMDFEV-ENA-VLGKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGEYM 595 (731)
T ss_dssp EEEEEEE-CCC-BTTCCEEEEEEEEECSSSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEEEEEEECHHHHT
T ss_pred eEEEEec-CCC-CCCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCccccceeEeeEEEEECCCceEEEEEEECHHHHh
Confidence 3444444 222 247778888887777666532233333333333444322221 122334444444444443321 021
Q ss_pred ccccc--ceEEEEEEEEEECCcceEEeeEEEEEEEEeeeEEEEEecCCcccCCCeEEEEEEEEccCCCccC
Q psy5522 277 LTDEY--ERNIHFDVAVEEALTGRRQNNTGSVVFHKHKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVT 345 (1397)
Q Consensus 277 ~~~~~--~~~l~V~a~VtE~gTG~~~~~~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~ 345 (1397)
+.+ ...+++.|..+...|+....+...+.+.....+|+....+ +-|.+..+.|.++||=..|+.
T Consensus 596 --~~L~d~~~i~~~a~~~v~et~~~~~~~~di~l~~P~l~I~v~g~~---~v~~~l~v~vsf~NPL~~~L~ 661 (731)
T 1ex0_A 596 --GQLLEQASLHFFVTARINETRDVLAKQKSTVLTIPEIIIKVRGTQ---VVGSDMTVTVQFTNPLKETLR 661 (731)
T ss_dssp --TTCCTTCEEEEEEEEEETTTCCEEEEEEEEECBCCCCEEEEEECC---BTTSCEEEEEEEECCSSSCEE
T ss_pred --hhccCCCEEEEEEEEEECCCCeEEEEEEEEEEeCCCEEEEeCCCc---ccCCeEEEEEEEECCCCCccc
Confidence 112 3567888888888899999999999999988888877665 458899999999999888887
No 78
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=74.38 E-value=4.9 Score=37.76 Aligned_cols=61 Identities=20% Similarity=0.291 Sum_probs=44.7
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.|+...|.+-++|.. ...+.+.|.+|.+..+. ...+..|.+.-+|. |.++ |.|+|.+..++
T Consensus 26 vg~~~~F~v~t~dag-----~g~l~v~v~gp~~~~~~---v~d~~dGty~v~Y~-p~~~--G~y~I~V~~~g 86 (105)
T 2dic_A 26 TNKPNVFTVVTRGAG-----IGGLGITVEGPSESKIN---CRDNKDGSCSAEYI-PFAP--GDYDVNITYGG 86 (105)
T ss_dssp TTCCEEEEEECTTTC-----SSCEEEEEESSSCCCCE---EEECSSSCEEEEEC-CSSC--EEEEEEEEETT
T ss_pred cCCcEEEEEEEccCC-----CCceEEEEECCCCCeEE---EEECCCCeEEEEEE-eCCC--eEEEEEEEECC
Confidence 466666666666652 44577888999886553 24567899999994 6654 99999999987
No 79
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=73.99 E-value=65 Score=40.10 Aligned_cols=147 Identities=10% Similarity=0.097 Sum_probs=89.9
Q ss_pred cEEEEEeCCCceEeeCCeEEEEEEEEEecCccccceEEEEEEeccccCccccccc-cceeEEeecCceEEEEEechh-hh
Q psy5522 198 KFEVNVNVPPHATFKDSKVVISVNAKYTYGKPVKGEATITAYPTIFSGVIQPLFQ-TPVRKVVPIDGKTVIEFDVVK-EL 275 (1397)
Q Consensus 198 kFeV~v~~p~~i~~~~~~~~v~v~AkYtyGkPV~G~v~v~v~~~~~~g~~~~~~~-~~~~~~~d~~G~~~~~~~~~~-~~ 275 (1397)
..+++++....+ .|+.|.+.+..+-....+-.-++.+.+...++.|.....+. ..+.-++..+..-.+.+.+.- +.
T Consensus 472 ~v~~~i~~~~~~--~G~df~v~v~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v~~~i~y~~Y 549 (695)
T 1g0d_A 472 RLQLSIKHAQPV--FGTDFDVIVEVKNEGGRDAHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHYDDY 549 (695)
T ss_dssp CEEEEEEECCCB--TTCCEEEEEEEEECSSSCEEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECHHHH
T ss_pred CeEEEEEeCCCC--CCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEEEEEEECHHHH
Confidence 355666665555 58889999998877776633333333333344454333332 223344555544444444322 02
Q ss_pred cccccc--ceEEEEEEEEEECCcceEEeeEEEEEEEEeeeEEEEEecCCcccCCCeEEEEEEEEccCCCccCCCCceEEE
Q psy5522 276 QLTDEY--ERNIHFDVAVEEALTGRRQNNTGSVVFHKHKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVTDNNNMVQV 353 (1397)
Q Consensus 276 ~~~~~~--~~~l~V~a~VtE~gTG~~~~~~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v 353 (1397)
. +.+ ...+++.|..+...|+....+...+.+.....+|+... .-+-|.+..+.|.++||=..|+.+ ..+.+
T Consensus 550 ~--~~L~d~~~i~~~a~~~v~et~~~~~~~~di~l~~P~l~I~v~g---~~~v~~~l~a~vsf~NPL~~~L~~--c~~~v 622 (695)
T 1g0d_A 550 V--RCVSEHHLIRVKALLDAPGENGPIMTVANIPLSTPELLVQVPG---KAVVWEPLTAYVSFTNPLPVPLKG--GVFTL 622 (695)
T ss_dssp T--TTCCTTCEEEEEEEEECCC---EEEEEEEEECBCCCCEEECCS---CEETTCCEEEEEEEECCSSSCEES--CEEEE
T ss_pred h--hhcccCCeEEEEEEEEECCCCeEEEEEEEEEEcCCCEEEEeCC---CcccCCeEEEEEEEECCCCCcccc--eEEEE
Confidence 1 111 34677778877778899999999999988888877543 346699999999999998888873 34444
No 80
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=71.94 E-value=7.2 Score=35.85 Aligned_cols=64 Identities=13% Similarity=0.072 Sum_probs=47.0
Q ss_pred cCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 110 KPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 110 kPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
..|+...|-+-+.|. ....+.+.|.+|+|..+ ........+|.+.-+|.... .|.|+|.+..++
T Consensus 20 ~~g~~~~F~v~~~~a-----G~~~l~v~v~~p~~~~~-~~~v~d~~dGty~v~Y~p~~---~G~y~i~V~~~g 83 (96)
T 1v05_A 20 FVGQKNSFTVDCSKA-----GTNMMMVGVHGPKTPCE-EVYVKHMGNRVYNVTYTVKE---KGDYILIVKWGD 83 (96)
T ss_dssp CTTSCEEEEEECTTS-----BSCCEEEEEECSSSCCS-EEEEEECSTTEEEEEEECSS---CEEEEEEEEETT
T ss_pred EcCCCEEEEEEEeCC-----CCCcEEEEEECCCCCee-EEEEEeCCCCEEEEEEEeCC---CEEEEEEEEECC
Confidence 356777777666654 35668899999998643 33345567899999998654 499999999987
No 81
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=71.77 E-value=7.5 Score=36.66 Aligned_cols=64 Identities=14% Similarity=0.125 Sum_probs=45.9
Q ss_pred cCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 110 KPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 110 kPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
+.|+...|.+-+.+. ....+.+.|.+|+|..+. ........|.+..+|... + .|.|+|.+..++
T Consensus 26 ~~~~~~~F~V~~~~a-----G~~~l~V~i~~p~g~~~~-~~v~d~~dGty~v~Y~p~-~--~G~y~i~V~~~g 89 (108)
T 2dj4_A 26 RARVLQSFTVDSSKA-----GLAPLEVRVLGPRGLVEP-VNVVDNGDGTHTVTYTPS-Q--EGPYMVSVKYAD 89 (108)
T ss_dssp BTTSCEEEEEECTTT-----CSCCEEEEEECSSSCEEC-CCCEECSSSEEEEEECCS-S--CEEEEEEEEESS
T ss_pred cCCccEEEEEEECCC-----CCceEEEEEECCCCCEee-eEEEECCCCEEEEEEEeC-C--CeeEEEEEEECC
Confidence 346666665544432 356789999999996553 234556789999999855 3 399999999987
No 82
>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A*
Probab=71.26 E-value=11 Score=47.34 Aligned_cols=81 Identities=19% Similarity=0.212 Sum_probs=57.7
Q ss_pred EEEEEcCCCcccCCceeEEEEEEEcC--CCccCCCcceEEEE-------------ECCCCCeEEeeeeeccCCceeeeee
Q psy5522 99 SVFIQLDKAIYKPGDLVRFRAIVLNS--HLKPSVTGALEIFI-------------TDGKGNRIKQWTRALTTRGVFSADL 163 (1397)
Q Consensus 99 ~vfIqTDKpIYkPGqtV~fRvv~ld~--~l~P~~~~~~~v~I-------------~DP~g~~I~qw~~~~~~~Gi~~~sf 163 (1397)
.+.-|. ++.|++|++|.++.+.-++ +++- .+.++.|+- .|.+-....+|.........+..++
T Consensus 525 ~v~~~~-~~~y~~g~~v~~~f~~~~p~n~~~~-~~t~~~ve~~~~~~~w~~~~v~~D~d~~t~~~w~r~~~~~s~~~~~W 602 (646)
T 2zws_A 525 DVLQQP-RESYRIGDKVTVAFVTGHPKNDLRT-EKTFLEVVNIGKDGKQTPVTVATDNDWDTQYRWERVGISASKATISW 602 (646)
T ss_dssp CEEECC-CSEEETTCEEEEEEECCCGGGCCCT-TSCSEEEEEEESSSCCCCEEEEETTSTTEEEEEEEETTTEEEEEEEE
T ss_pred cEeecC-cccccCCCEEEEEEEccCCCccccc-CCceEEEEEecCCCceEEEEEecCCCccEEEEEEeCCCCceEEEEEE
Confidence 455555 6789999999999988775 3432 345556554 2444445668986655455678899
Q ss_pred ecCCCCCCeeEEEEEEEc
Q psy5522 164 QLSKSPVLGDWNITINVL 181 (1397)
Q Consensus 164 ~L~~~~~lG~y~I~v~~~ 181 (1397)
.+|.+...|.|+|+-.-.
T Consensus 603 ~i~~~~~~g~yRi~~~g~ 620 (646)
T 2zws_A 603 SIPPGTEPGHYYIRHYGN 620 (646)
T ss_dssp ECCTTCCSEEEEEEEEEE
T ss_pred ECCCCCCCcceEEEEEcc
Confidence 999999999999998653
No 83
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=71.20 E-value=2.1e+02 Score=35.68 Aligned_cols=141 Identities=9% Similarity=0.093 Sum_probs=90.2
Q ss_pred EEEEEeCCCceEeeCCeEEEEEEEEEecCccccceEEEEEEeccccCcccccc-c-cceeEEeecCceEEEEEechh-hh
Q psy5522 199 FEVNVNVPPHATFKDSKVVISVNAKYTYGKPVKGEATITAYPTIFSGVIQPLF-Q-TPVRKVVPIDGKTVIEFDVVK-EL 275 (1397)
Q Consensus 199 FeV~v~~p~~i~~~~~~~~v~v~AkYtyGkPV~G~v~v~v~~~~~~g~~~~~~-~-~~~~~~~d~~G~~~~~~~~~~-~~ 275 (1397)
.+++++....+. .|+.|.+.+..+-....+-.-++.+.+...++.|.....+ . ..+.-++..+..-.+.+.+.- +.
T Consensus 473 v~~~~~~~~~~~-~G~df~v~v~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y~~Y 551 (687)
T 2q3z_A 473 MAMRIRVGQSMN-MGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEKY 551 (687)
T ss_dssp EEEEEECCSCCB-TTCCEEEEEEEEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECHHHH
T ss_pred eEEEEEeCCCCc-CCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECHHHH
Confidence 456666555443 4788888888888777653333333333334444432222 1 122334555555455444322 02
Q ss_pred cccccc--ceEEEEEEEEEECCcceEEeeEEEEEEEEeeeEEEEEecCCcccCCCeEEEEEEEEccCCCccC
Q psy5522 276 QLTDEY--ERNIHFDVAVEEALTGRRQNNTGSVVFHKHKYKMDLIKSSEYFKPGLKYTAYMKLTHHDGTPVT 345 (1397)
Q Consensus 276 ~~~~~~--~~~l~V~a~VtE~gTG~~~~~~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dG~P~~ 345 (1397)
. +.+ ...+.+.|..+...|+....+...+.+.....+|+....+ +-|.+..+.|.++||=..|+.
T Consensus 552 ~--~~L~d~~~i~~~a~~~v~et~~~~~~~~di~l~~P~l~I~v~g~~---~v~~~~~v~v~f~NPL~~~L~ 618 (687)
T 2q3z_A 552 R--DCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIKIRILGEP---KQKRKLVAEVSLQNPLPVALE 618 (687)
T ss_dssp T--TTCCTTCEEEEEEEEEETTTTEEEEEEEEEECBCCCCEEEEESCC---SSSSCEEEEEEEECCSSSCBC
T ss_pred h--hhccCCCEEEEEEEEEECCCCeEEEEEEEEEEeCCCEEEEeCCCc---ccCCeEEEEEEEECCCCCccc
Confidence 1 112 3567888888888899999999999999888888876655 458899999999999999987
No 84
>3dra_B Geranylgeranyltransferase type I beta subunit; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=70.53 E-value=6.3 Score=46.05 Aligned_cols=99 Identities=12% Similarity=0.099 Sum_probs=54.8
Q ss_pred hcccchHHHHHHHHHHhccc--cHHHHHHHHHHHHhccccceeeec---C-CCCccccC--C--C-----CCCCCcchh-
Q psy5522 898 MLNFVPNIVVLEYLKKTYQL--TDAIEAKASRYLETGYQQELTYRR---P-DGSFSAFG--T--T-----DPNGSTWLT- 961 (1397)
Q Consensus 898 m~~~~p~i~~l~yL~~~~~l--~~~~~~~a~~~l~~gy~~~l~y~~---~-dGsfs~~~--~--~-----~~~~s~wlT- 961 (1397)
+++++++..++.-|.--+.. ..--+++..++|.+ .|+ + ||||..+. + . ..+.++..+
T Consensus 91 ~~hl~~Ty~Al~~L~ilg~~~~~~vdr~~i~~~l~~-------lQ~~~~~~dGsF~~~~~~~~~dg~~~~~ge~D~R~~Y 163 (390)
T 3dra_B 91 CPNLSSTLFALYNLLILKSPYHTIINRKKIMNFLCK-------CQVKDGINKGGFVPTLYYNEENGDYKQYGEPDLRVCY 163 (390)
T ss_dssp CCBHHHHHHHHHHHHHTTCCGGGTCCHHHHHHHHHH-------HBCCSSTTTTCBCSEEEEETTTTEEEEESCCCHHHHH
T ss_pred cccHHHHHHHHHHHHHhCchhhccccHHHHHHHHHH-------HhCCCCCCCCceeeeccccccccccccCCcchHHHHH
Confidence 56667776666666544331 11124455666654 355 5 89998553 1 0 124566655
Q ss_pred -HHHHHHHHHccC--------CCccCHHHHHHHHHHHHhcccCCCccccch
Q psy5522 962 -AFVAKSFRQAAS--------HTTIDESVILEALAWLSSNQAVNGSFPEVG 1003 (1397)
Q Consensus 962 -Ayvl~~~~~a~~--------~i~vd~~~~~~~~~WL~~~q~~~G~F~stq 1003 (1397)
|-+.+.++.... -..+....++++++|+.+.|+.+|||+...
T Consensus 164 cA~~i~~lL~~~~~~~~~~~~~~~~~~id~~~~~~~I~~cq~ydGGfg~~p 214 (390)
T 3dra_B 164 MALLIRHLMKYDDNNNNNNREDSNETDIDLISLQQFILDRININGGFSSTI 214 (390)
T ss_dssp HHHHHHHHTTCC-------------CCCCHHHHHHHHHTTBCTTSCBCSST
T ss_pred HHHHHHHHhCCCcccccccccccccccccHHHHHHHHHHhcCCCCCcCCCC
Confidence 444444432221 000001235778999999999999998653
No 85
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.65 E-value=4 Score=39.34 Aligned_cols=64 Identities=19% Similarity=0.200 Sum_probs=48.4
Q ss_pred cCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 110 KPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 110 kPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
+.|+...|.+-++|. ....+.+.|.+|+|..+.- .......|.+..+|.... .|.|+|.+..++
T Consensus 37 ~~g~~~~F~V~~~da-----G~~~l~v~v~~p~g~~~~~-~v~d~~dGty~v~Y~p~~---~G~y~i~V~~~g 100 (119)
T 2e9j_A 37 PASLPVDFAIDARDA-----GEGLLAVQITDQEGKPKRA-IVHDNKDGTYAVTYIPDK---TGRYMIGVTYGG 100 (119)
T ss_dssp ETTSCEEEEEEESSC-----CCCCEECCEECTTCCCCCE-EEEECCSSEEEEEECCCS---CSEEEECCEESS
T ss_pred ecCCcEEEEEEECCC-----CCCeEEEEEECCCCCEEEE-EEEECCCCEEEEEEEeCC---CEEEEEEEEECC
Confidence 467888888877774 3467888899999865532 234567899999999533 699999999987
No 86
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=69.39 E-value=1.4 Score=49.88 Aligned_cols=66 Identities=15% Similarity=0.140 Sum_probs=44.7
Q ss_pred cceeeecCCCCccccCCCC-----------CCCCcchhHHHHHHHHHccCCC--ccCHHHHHHHHHHHHhcccCCCccc
Q psy5522 935 QELTYRRPDGSFSAFGTTD-----------PNGSTWLTAFVAKSFRQAASHT--TIDESVILEALAWLSSNQAVNGSFP 1000 (1397)
Q Consensus 935 ~~l~y~~~dGsfs~~~~~~-----------~~~s~wlTAyvl~~~~~a~~~i--~vd~~~~~~~~~WL~~~q~~~G~F~ 1000 (1397)
.+|.||+++|+|...-.-+ ...+.--||-++++|.++.... .--.+.+.++++||...|.++|||.
T Consensus 39 ~~l~~Q~~~GGW~kn~d~~~~~~~~~~~~~~t~DnddTa~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWp 117 (332)
T 1gxm_A 39 VVLSYQQNNGGWPKNLDYNSVGNGGGGNESGTIDNGATITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYSTGALP 117 (332)
T ss_dssp HHHHTCCTTSCCCSCCCTTTCCCCCCCCSCEECGGGTTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCTTSCCB
T ss_pred HHHHcCcCCCCCCcceecccccccCCCCCCCCccCccHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccCCCCCcc
Confidence 3567999999987521110 0122334999999998764210 0113567899999999999999997
No 87
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.27 E-value=6.1 Score=37.09 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=44.8
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.|+...|-+-++|. ....+.+.|.+|.+..+ .......|.+..+|.... .|.|.|.+..++
T Consensus 26 vg~~~~F~v~t~da-----g~~~l~v~v~~p~~~~v---~v~d~~dGty~v~Y~p~~---~G~y~I~V~~~g 86 (105)
T 2ee6_A 26 AGVPAEFSIWTREA-----GAGGLSIAVEGPSKAEI---TFDDHKNGSCGVSYIAQE---PGNYEVSIKFND 86 (105)
T ss_dssp BTSEEEECEECSSS-----CCCCEEEEEESSSCEEE---EECCCCSSCCCEEEEESS---CEEEEEEEEETT
T ss_pred cCCcEEEEEEECCC-----CCCcEEEEEECCCCCEE---EEEECCCCEEEEEEEECC---CceEEEEEEECC
Confidence 35566666655554 34567888999998666 235667799999998643 499999999987
No 88
>2pmv_A Gastric intrinsic factor; cobalamin transport protein alpha6-alpha6 motif two domain P transport protein; HET: NAG B12; 2.60A {Homo sapiens} PDB: 3kq4_A*
Probab=68.50 E-value=3.2 Score=48.37 Aligned_cols=67 Identities=9% Similarity=0.075 Sum_probs=49.9
Q ss_pred cceeeecCCCCccccCCCCCCCCcchhHHHHHHHHHccCCCccCHHHHHHHHHHHHhcccCCCccccchH---hHHHhhc
Q psy5522 935 QELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAVNGSFPEVGK---VSHADMQ 1011 (1397)
Q Consensus 935 ~~l~y~~~dGsfs~~~~~~~~~s~wlTAyvl~~~~~a~~~i~vd~~~~~~~~~WL~~~q~~~G~F~stqd---vl~al~~ 1011 (1397)
+++.-|++||+| |++.-|+.|+.+|..+... ....-.-.++++||.. |..+|+|...-. ++.+|..
T Consensus 191 ~l~~~q~~dG~f---------Gn~yST~LA~QAL~~~~~~-~~~~W~c~~al~~l~~-q~~~G~F~np~~taQilPaL~~ 259 (399)
T 2pmv_A 191 KISMKIKDNGII---------GDIYSTGLAMQALSVTPEP-SKKEWNCKKTTDMILN-EIKQGKFHNPMSIAQILPSLKG 259 (399)
T ss_dssp HHTTSBCTTSCB---------SSHHHHHHHHHHHHHCSSC-CSSCCCHHHHHHHHHH-HHTTTTTCSHHHHHHHHHHHTT
T ss_pred HHHHhhcCCCcc---------cccccHHHHHHHHHhcCCC-ccccccHHHHHHHHHH-HhhCCCcCCHHHHHHHHHHhcC
Confidence 455568899988 4799999999999988764 2222246779999998 899999985432 4777766
Q ss_pred C
Q psy5522 1012 G 1012 (1397)
Q Consensus 1012 ~ 1012 (1397)
.
T Consensus 260 k 260 (399)
T 2pmv_A 260 K 260 (399)
T ss_dssp C
T ss_pred C
Confidence 3
No 89
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=67.52 E-value=20 Score=34.95 Aligned_cols=70 Identities=17% Similarity=0.223 Sum_probs=49.9
Q ss_pred ccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 109 YKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 109 YkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
-++||++.|++-+.+....++..-.+.+++ +|..+..+............+|..... ..|.|+|++....
T Consensus 29 v~~G~~~ti~vtV~N~G~~~a~~~~V~lyv---ng~~v~t~~v~La~G~s~tv~f~~~~~-~~G~~~v~AvVD~ 98 (127)
T 3idu_A 29 VGVNKLAEYEVHVKNLGGIGVPSTKVRVYI---NGTLYKNWTVSLGPKEEKVLTFNWTPT-QEGMYRINATVDE 98 (127)
T ss_dssp ECTTCCEEEEEEEEECSSSCEEEEEEEEEE---TTEEEEEEEEEECTTCEEEEEEEECCS-SCEEEEEEEEEST
T ss_pred ccCCCEEEEEEEEEECCCCccCCcEEEEEE---CCEEEeeEEeccCCCCeEEEEEEEEcC-CCcEEEEEEEEcC
Confidence 379999999999998877775444555555 677887765544444555666666543 4899999999864
No 90
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=67.51 E-value=9.3 Score=36.34 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=48.0
Q ss_pred cCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 110 KPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 110 kPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
+.|+...|.|-+.|. ....+.+.|.+|+|..+.- .......|.+..+|.... .|.|+|.+..++
T Consensus 25 ~~g~~~~F~V~~~da-----G~~~l~v~i~~~~g~~~~~-~v~d~~dGty~v~Y~p~~---~G~y~i~V~~~g 88 (113)
T 2dia_A 25 KVGEAGLLSVDCSEA-----GPGALGLEAVSDSGTKAEV-SIQNNKDGTYAVTYVPLT---AGMYTLTMKYGG 88 (113)
T ss_dssp ETTCCCCEEEEESSC-----CSCCEEEEEEETTTEECEE-EEEECTTSEEEEEEECSS---CEEEEEEEEETT
T ss_pred ecCCCEEEEEEECCC-----CCccEEEEEECCCCCEeeE-EEEECCCCEEEEEEEeCC---CccEEEEEEECC
Confidence 367777777777664 3567889999998865543 335667899999998643 599999999987
No 91
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=67.08 E-value=9.6 Score=34.90 Aligned_cols=61 Identities=15% Similarity=0.233 Sum_probs=46.1
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.|+...|.+-++|. ....+.|.|.+|.+..+. ......|.+.-+|.... .|.|.|.+..++
T Consensus 18 ~g~~~~F~v~~~da-----g~~~~~v~v~gp~~~~~~---v~d~~dGty~v~Y~p~~---~G~y~I~V~~~g 78 (94)
T 2w0p_A 18 AGVPAEFSIWTREA-----GAGGLAIAVEGPSKAEIS---FEDRKDGSCGVAYVVQE---PGDYEVSVKFNE 78 (94)
T ss_dssp TTSCEEEEEECGGG-----CSCCEEEEEEESSCCEEE---EEECTTSCEEEEEECSS---CEEEEEEEEETT
T ss_pred cCCCEEEEEEEcCC-----CCCcEEEEEECCCCCeEE---EEECCCCEEEEEEEECC---CceEEEEEEECC
Confidence 56777777777765 345678888999986543 35567899999999643 399999999987
No 92
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=65.62 E-value=11 Score=33.94 Aligned_cols=64 Identities=9% Similarity=0.067 Sum_probs=46.3
Q ss_pred cCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 110 KPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 110 kPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
..|+...|-+-+.|. ....+.+.|.+|+|..+. -......+|.+..+|...+ .|.|+|.+..++
T Consensus 13 ~vg~~~~F~v~~~~a-----G~~~l~v~v~~p~g~~~~-~~v~d~~dGty~v~Y~p~~---~G~y~i~V~~~g 76 (89)
T 3cnk_A 13 YVGQKSSFTVDCSKA-----GNNMLLVGVHGPRTPCEE-ILVKHVGSRLYSVSYLLKD---KGEYTLVVKWGH 76 (89)
T ss_dssp BTTBCEEEEEECTTS-----CSCCEEEEEECSSSCCSE-EEEEEEETTEEEEEEECCS---CEEEEEEEEETT
T ss_pred ECCCCEEEEEEECcC-----CCCcEEEEEECCCCCcee-EEEEECCCCEEEEEEEECC---CccEEEEEEECC
Confidence 456777777766653 356788999999986322 2234456799999998653 599999999987
No 93
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=64.79 E-value=12 Score=34.33 Aligned_cols=60 Identities=17% Similarity=0.193 Sum_probs=43.6
Q ss_pred CceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 112 GDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 112 GqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
|+...|-+-++|.. ...+.+.|.+|++..+. ......|.+..+|.. .+ .|.|+|.+..++
T Consensus 22 g~~~~F~v~t~dag-----~~~l~v~v~~p~~~~~~---v~d~~dGty~v~Y~p-~~--~G~y~i~V~~~g 81 (97)
T 2bp3_A 22 NKPATFTVNTKDAG-----EGGLSLAIEGPSKAEIS---CTDNQDGTCSVSYLP-VL--PGDYSILVKYNE 81 (97)
T ss_dssp TSCEEEEEECTTCC-----SEEEEEEEEESSCCEEE---EEECSSSEEEEEEEC-SS--CEEEEEEEEETT
T ss_pred CCcEEEEEEECCCC-----CCcEEEEEECCCCCEEE---EEECCCCEEEEEEEe-CC--CCcEEEEEEECC
Confidence 56666666665553 45678888999986553 345667999999975 44 399999999886
No 94
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=64.42 E-value=17 Score=35.82 Aligned_cols=51 Identities=24% Similarity=0.291 Sum_probs=40.3
Q ss_pred CcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCC----CCCeeEEEEEEEc
Q psy5522 131 TGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKS----PVLGDWNITINVL 181 (1397)
Q Consensus 131 ~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~----~~lG~y~I~v~~~ 181 (1397)
...+.|+|.|.+|+.|++........|.....+.--++ .+.|.|++++...
T Consensus 38 a~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 38 AGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQT 92 (138)
T ss_dssp SEEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred CCEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEE
Confidence 35689999999999999876555677888888876443 4679999999864
No 95
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=64.13 E-value=15 Score=35.27 Aligned_cols=61 Identities=18% Similarity=0.259 Sum_probs=44.7
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.|+...|-+-++|. ....+.+.|.+|++..+ .......|.+..+|.. .+ .|.|.|.+..++
T Consensus 33 vg~~~~F~v~t~da-----g~~~l~v~v~~p~~~~~---~v~d~~dGty~v~Y~p-~~--~G~y~I~V~~~g 93 (119)
T 2k9u_A 33 AGVPAEFSIWTREA-----GAGGLSIAVEGPSKAEI---AFEDRKDGSCGVSYVV-QE--PGDYEVSIKFND 93 (119)
T ss_dssp TTCEEEEEEECCSS-----CSEEEEEEEESSSCCEE---EEECCSSSEEEEEEEC-CS--SEEEEEEEEETS
T ss_pred cCCeEEEEEEECCC-----CCCcEEEEEeCCCCCeE---EEEECCCCEEEEEEEE-CC--CceEEEEEEECC
Confidence 46666676666665 24567888999988443 2345678999999975 44 399999999987
No 96
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.28 E-value=13 Score=35.33 Aligned_cols=61 Identities=18% Similarity=0.303 Sum_probs=44.8
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.|+...|-+-++|.. ...+.|.|.+|++..+ .......|.+..+|.. .++ |.|.|.+..++
T Consensus 36 vg~~~~F~v~t~dag-----~~~l~v~v~~p~~~~~---~v~d~~dGty~v~Y~p-~~~--G~y~I~V~~~g 96 (115)
T 2eea_A 36 ANKTATFTIVTEDAG-----EGGLDLAIEGPSKAEI---SCIDNKDGTCTVTYLP-TLP--GDYSILVKYND 96 (115)
T ss_dssp TTCCEEEEEECSSCC-----SSCEEEEEESSSCCEE---CCBCCSSSEEEEEEEC-SSC--SCEEEEEEESS
T ss_pred cCCeEEEEEEcccCC-----CCceEEEEECCCCceE---EEEECCCCEEEEEEEe-CCC--eeEEEEEEECC
Confidence 456666666666653 4567899999998654 2455678999999975 443 99999999886
No 97
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=61.64 E-value=18 Score=33.80 Aligned_cols=81 Identities=21% Similarity=0.107 Sum_probs=59.9
Q ss_pred EEecCCceeeeCCEEEEEEEEEcCCCccEE-EEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeEEEEE
Q psy5522 717 ISLDLPYSVMRGEVVAIPVVVFNYLSQDLV-ADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGSTTTFV 795 (1397)
Q Consensus 717 v~l~LPysv~rGE~~~l~~~VfNyl~~~~~-v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~ 795 (1397)
+.+.+|--.+.|+.+.+.++..|=|+..++ ..++++.+.-..- ....--.|.+++...+.+.
T Consensus 8 i~I~v~g~~~v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~-----------------~~~~~~~v~pg~~~~~~~~ 70 (102)
T 2xzz_A 8 LSLTLLGAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRP-----------------KILNVGDIGGNETVTLRQS 70 (102)
T ss_dssp EEEEESSCCCSSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEE-----------------EEEEECCBCTTCEEEEEEE
T ss_pred EEEEECCCcccCCeEEEEEEEECCCCCcccCEEEEEECCCCCcc-----------------eEEEcCcCCCCCEEEEEEE
Confidence 455667777889999999999999998876 4557776642211 0111235889999999999
Q ss_pred EEeceeeeEEEEEEEEeCC
Q psy5522 796 ITPKELGYIGIKVTATSNL 814 (1397)
Q Consensus 796 v~p~~lG~v~itV~A~~~~ 814 (1397)
++|.+.|.-.+.+.-.+..
T Consensus 71 ~~P~~~G~~~L~a~f~s~~ 89 (102)
T 2xzz_A 71 FVPVRPGPRQLIASLDSPQ 89 (102)
T ss_dssp ECCCSCSSCCCEEEEECGG
T ss_pred EecCcccceEEEEEEECCc
Confidence 9999999887777766554
No 98
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=61.57 E-value=28 Score=32.57 Aligned_cols=60 Identities=10% Similarity=-0.076 Sum_probs=37.3
Q ss_pred cceEEEEECCCCCeEEe-------eeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC-----eEEEEEEEEe
Q psy5522 132 GALEIFITDGKGNRIKQ-------WTRALTTRGVFSADLQLSKSPVLGDWNITINVLD-----QKFTKRFTVA 192 (1397)
Q Consensus 132 ~~~~v~I~DP~g~~I~q-------w~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~-----~~~~~~F~Ve 192 (1397)
..-.|.|.|++|+.+.. -.......+--....+|+ ....|.|+|....-+ ...+.+|.|+
T Consensus 33 ~~s~v~v~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~-~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 104 (104)
T 1lyq_A 33 KFSGAKLTMTGMKGMSSHSPMPVAAKVAPGADPKSMVIIPRE-PLPAGTYRVDWRAVSSDTHPITGNYTFTVK 104 (104)
T ss_dssp GGCEEEEEEEEEC---CCCCEECCEEEEECSSTTEEEEEESS-CCCSEEEEEEEEECCTTSCCEEEEEEEEEC
T ss_pred cccEEEEECCCCCeeeeccccccccceeecCCCCcEEEEECC-CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 35568889999887764 322222222345667777 556799999998853 4567778774
No 99
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=61.47 E-value=3.5 Score=46.71 Aligned_cols=70 Identities=10% Similarity=0.052 Sum_probs=48.6
Q ss_pred hccccceeeecCCCCccccCCCCCCC------CcchhHHHHHHHHHccC----C---CccC------HHHHHHHHHHHHh
Q psy5522 931 TGYQQELTYRRPDGSFSAFGTTDPNG------STWLTAFVAKSFRQAAS----H---TTID------ESVILEALAWLSS 991 (1397)
Q Consensus 931 ~gy~~~l~y~~~dGsfs~~~~~~~~~------s~wlTAyvl~~~~~a~~----~---i~vd------~~~~~~~~~WL~~ 991 (1397)
.|..-+|..|.+||+|..|-.....- +=-.|+-||..|..... | +++| ...+.+++.||.+
T Consensus 101 Rgl~wlL~mQ~~nGGWpqFdpd~~~Yl~~IpFnDDvtarvLelL~~~~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk 180 (332)
T 1gxm_A 101 KAANFLVNSQYSTGALPQFYPLKGGYSDHATFNDNGMAYALTVLDFAANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILK 180 (332)
T ss_dssp HHHHHHHHHCCTTSCCBSEESCCSGGGGSEECGGGHHHHHHHHHHHHHTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCCccccCCCcccccccCCcchHHHHHHHHHHHHHHhccCCccccccccchhhhhHHHHHHHHHHHHH
Confidence 56666777899999999885431100 11258999999988752 3 2343 3457889999999
Q ss_pred cccCCCccc
Q psy5522 992 NQAVNGSFP 1000 (1397)
Q Consensus 992 ~q~~~G~F~ 1000 (1397)
.|..+||..
T Consensus 181 ~Qe~dggw~ 189 (332)
T 1gxm_A 181 AQWKQNGVL 189 (332)
T ss_dssp HSCEETTEE
T ss_pred hhCccCCCc
Confidence 888888754
No 100
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=61.42 E-value=41 Score=33.05 Aligned_cols=51 Identities=12% Similarity=0.101 Sum_probs=38.8
Q ss_pred CcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCC----CCCCeeEEEEEEEc
Q psy5522 131 TGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSK----SPVLGDWNITINVL 181 (1397)
Q Consensus 131 ~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~----~~~lG~y~I~v~~~ 181 (1397)
-..+.|.|.|.+|+.|++........|...+.+.--+ ..+.|.|+++++..
T Consensus 36 a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~ 90 (138)
T 3osv_A 36 SSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTS 90 (138)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred CcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEE
Confidence 3578999999999999987655566787777776533 25679999988754
No 101
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=61.03 E-value=91 Score=33.97 Aligned_cols=77 Identities=6% Similarity=-0.026 Sum_probs=51.7
Q ss_pred ecCc--eEEEEEechhhhccccccceEEEEEEEEEECCcceEEeeEEEEEEEEeeeEEEEEecCCcccCCCeEEEEEEEE
Q psy5522 260 PIDG--KTVIEFDVVKELQLTDEYERNIHFDVAVEEALTGRRQNNTGSVVFHKHKYKMDLIKSSEYFKPGLKYTAYMKLT 337 (1397)
Q Consensus 260 d~~G--~~~~~~~~~~~~~~~~~~~~~l~V~a~VtE~gTG~~~~~~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~ 337 (1397)
+.+| .+++.+.+++.+ -+..+.|--.....|.-+.....+ ....++.|. ...|..+++|..+.+.+.+.
T Consensus 35 ~~~g~~~~~~~~~lPDsi-------TtW~~~a~a~s~~~G~g~~~~~~i-~v~kpffv~-~~LP~sv~rGE~~~l~~~V~ 105 (252)
T 3hrz_B 35 NSQGISSKTMSFYLRDSI-------TTWVVLAVSFTPTKGICVAEPYEI-RVMKVFFID-LQMPYSVVKNEQVEIRAILH 105 (252)
T ss_dssp CTTSCEEEEEEEECCSCS-------SEEEEEEEEEETTTEEEECCCEEE-EBCCSEEEE-ECCCSCEETTCCEEEEEEEE
T ss_pred CCCCceEEEEEEECCCCc-------cEEEEEEEEEeCCCCeeeccceeE-EEECCEEEE-cCCCcEEeeCCEEEEEEEEE
Confidence 3456 778888887622 255666665554456655443333 344566665 45889999999999999999
Q ss_pred ccCCCccC
Q psy5522 338 HHDGTPVT 345 (1397)
Q Consensus 338 ~~dG~P~~ 345 (1397)
|+-++.+.
T Consensus 106 Ny~~~~~~ 113 (252)
T 3hrz_B 106 NYVNEDIY 113 (252)
T ss_dssp ECSSSCEE
T ss_pred cccCceEE
Confidence 99877764
No 102
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=59.30 E-value=12 Score=33.36 Aligned_cols=48 Identities=21% Similarity=0.170 Sum_probs=33.0
Q ss_pred EEEEEEEEecCccccc-eEEEEEEeccccCccccccccceeEEeecCceEEEEEec
Q psy5522 217 VISVNAKYTYGKPVKG-EATITAYPTIFSGVIQPLFQTPVRKVVPIDGKTVIEFDV 271 (1397)
Q Consensus 217 ~v~v~AkYtyGkPV~G-~v~v~v~~~~~~g~~~~~~~~~~~~~~d~~G~~~~~~~~ 271 (1397)
.++|..+-.-|+||+| .|.+.++-. .++.......+|.+|.+++..-.
T Consensus 2 ~~~v~V~d~~GkPV~gA~Vefe~yNy-------ae~~~~~~~~TD~~G~~s~~~G~ 50 (82)
T 3e8v_A 2 KGSVLVTDAEGQPVADATVEFKVYNY-------AEFYTVATKHTDRSGHASLTAGK 50 (82)
T ss_dssp EEEEEEECTTSCBCTTCEEEEEEEET-------TEEEEEEEEECCTTSEEEEECCS
T ss_pred cEEEEEEcCCCCCCCCCEEEEEEEEc-------hheeEEEEEEECCCceEEEEEcC
Confidence 4567777788999999 466665432 23333346789999999987543
No 103
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=58.02 E-value=16 Score=42.08 Aligned_cols=64 Identities=17% Similarity=0.267 Sum_probs=47.8
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEe-eeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQ-WTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~q-w~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
-|+...|.|-+.+. ..+.+.|.|.+|+|..+.- -....+..|.+.-+|. |.+ .|.|+|.+..++
T Consensus 271 vg~p~~F~Vdt~~A-----G~g~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~y~-P~~--~G~~~I~V~~~g 335 (347)
T 4b7l_A 271 VKQPAKFTVDTISA-----GQGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYL-PKV--TGLHKVTVLFAG 335 (347)
T ss_dssp TTSCEEEEEECTTT-----CSCCEEEEEECTTSCEEECEEEESSTTCSEEEEEEC-CCS--SSEEEEEEEETT
T ss_pred eCCEEEEEEEeCCC-----CCCceEEEEECCCCCeecCEEEEEcCCCCEEEEEEE-ECC--CEeEEEEEEECC
Confidence 57777787655432 3567899999999987763 3333456799999995 665 599999999987
No 104
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=57.63 E-value=31 Score=32.14 Aligned_cols=60 Identities=7% Similarity=-0.104 Sum_probs=36.9
Q ss_pred cceEEEEECCCCCeEEe------eeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC-----eEEEEEEEEe
Q psy5522 132 GALEIFITDGKGNRIKQ------WTRALTTRGVFSADLQLSKSPVLGDWNITINVLD-----QKFTKRFTVA 192 (1397)
Q Consensus 132 ~~~~v~I~DP~g~~I~q------w~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~-----~~~~~~F~Ve 192 (1397)
..-.|.|.|++|+.+.. -.......+--....+|+ ....|.|+|....-+ ...+..|.|+
T Consensus 32 ~~s~v~v~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~-~L~~G~YtV~WrvvS~DGH~~~G~~~FtV~ 102 (102)
T 2c9r_A 32 QFSGAKLVMTAMPGMEHSPMAVKAAVSGGGDPKTMVITPAS-PLTAGTYKVDWRAVSSDTFPITGSVTFKVK 102 (102)
T ss_dssp GGCEEEEEEEECC-----CEEECEEEEECSSTTEEEEEESS-CCCSEEEEEEEEECCTTCCCEEEEEEEEEC
T ss_pred CccEEEEECCCCCeeeeccccccccceecCCCCcEEEEECC-CCCCceEEEEEEEEecCCCccCCEEEEEEC
Confidence 35578889999987765 332222222346677776 456799999998853 4567778774
No 105
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=56.65 E-value=6 Score=46.19 Aligned_cols=70 Identities=16% Similarity=0.152 Sum_probs=48.3
Q ss_pred hccccceeeecCCCCccccCCCCCC------CCcchhHHHHHHHHHccC----CCccCH-------HHHHHHHHHHHhcc
Q psy5522 931 TGYQQELTYRRPDGSFSAFGTTDPN------GSTWLTAFVAKSFRQAAS----HTTIDE-------SVILEALAWLSSNQ 993 (1397)
Q Consensus 931 ~gy~~~l~y~~~dGsfs~~~~~~~~------~s~wlTAyvl~~~~~a~~----~i~vd~-------~~~~~~~~WL~~~q 993 (1397)
.|..-+|..|.+||+|..|-..... -+=-.|+-||..|..... |-++|+ ..+.+++.||.+.|
T Consensus 179 Rgl~wlL~mQ~~nGGWpqFdpdn~~y~~~IpFnDDvt~rvle~L~~~~~~~~~~~~~~~~~~~~~~~av~Rgi~~Ll~~Q 258 (408)
T 1r76_A 179 KGIEYLLASQFPNGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGRDGFGFVPPAIRTRALEATNAAIHCIVETQ 258 (408)
T ss_dssp HHHHHHHHHSCTTSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTCTTCTTSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHccCCCCCCcCcCccccccccCCCcCcHHHHHHHHHHHHHHhccCcccccchhhhhhHHHHHHHHHHHHHHhh
Confidence 5666677789999999888543110 001258899887765532 445553 46788999999988
Q ss_pred cC-CCccc
Q psy5522 994 AV-NGSFP 1000 (1397)
Q Consensus 994 ~~-~G~F~ 1000 (1397)
.. +|+..
T Consensus 259 e~~dGsw~ 266 (408)
T 1r76_A 259 VVQDGKRL 266 (408)
T ss_dssp CEETTEEC
T ss_pred cccCCccc
Confidence 87 89864
No 106
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A*
Probab=54.90 E-value=31 Score=42.47 Aligned_cols=98 Identities=12% Similarity=0.242 Sum_probs=55.3
Q ss_pred EEEEcCCCcccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeee-eccCCce----eeeeeecCCCCC--Ce
Q psy5522 100 VFIQLDKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTR-ALTTRGV----FSADLQLSKSPV--LG 172 (1397)
Q Consensus 100 vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~-~~~~~Gi----~~~sf~L~~~~~--lG 172 (1397)
.=+-|||..|+||+.|.+++-+-+..-+- ....+.+.+.- -++.|.+-.. +....|- -..++.+|.+-- .-
T Consensus 9 ~~v~tDKA~Y~PGe~V~l~~~l~n~t~~~-~~gtv~~~v~h-l~~~V~~~~~~~~l~~G~s~~~~~~~~~~P~~df~n~~ 86 (643)
T 3vmn_A 9 INLTTDKAVYQAGEAVHLNLTLNNTTSLA-QNITATAEVYS-LENKLKTLQYTKYLLPNESYTTQKGEFVIPANSLANNR 86 (643)
T ss_dssp CCCEESCSSBCTTSCEEEECEEECCSSSC-EEEEEEEEEEE-TTEEEEEEEEEEEECTTCEEECCTTSEEECTTSSCSSE
T ss_pred eeeeccccccCCCCeEEEEEEEecccCcc-ceeEEEEEEEe-cccccccceEEEEecCCCcceeeeeeeecCccccccCc
Confidence 34569999999999999998776644332 24555555543 2345554321 2212221 234778888653 23
Q ss_pred eEEEEEEEc---C---eEEEEEEEEee--ecCCcE
Q psy5522 173 DWNITINVL---D---QKFTKRFTVAE--YVLPKF 199 (1397)
Q Consensus 173 ~y~I~v~~~---~---~~~~~~F~VeE--YvLPkF 199 (1397)
-|-+.+... + ...+..+.|.. .+-||+
T Consensus 87 GYlvev~~~d~~g~~~~~~t~AIDVSSdWtkFPRY 121 (643)
T 3vmn_A 87 GYLLKVNISDSQNNILEQGNRAIAVEDDWRTFPRY 121 (643)
T ss_dssp EEEEEEEEECTTCCEEEEEEEEEEECSSTTSSCCE
T ss_pred eEEEEEEEEcCCCcEeeeeeEEEEecCCcccCCce
Confidence 477777664 2 23355566654 344444
No 107
>3n6y_A Immunoglobulin-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 1.50A {Pseudomonas aeruginosa}
Probab=54.57 E-value=80 Score=30.66 Aligned_cols=80 Identities=20% Similarity=0.247 Sum_probs=51.8
Q ss_pred ccCCceeEEEEEEEcCCCccCCCcceEEEE-----ECCCCCeEE--eeeeeccC---CceeeeeeecCCCCCCeeEEEEE
Q psy5522 109 YKPGDLVRFRAIVLNSHLKPSVTGALEIFI-----TDGKGNRIK--QWTRALTT---RGVFSADLQLSKSPVLGDWNITI 178 (1397)
Q Consensus 109 YkPGqtV~fRvv~ld~~l~P~~~~~~~v~I-----~DP~g~~I~--qw~~~~~~---~Gi~~~sf~L~~~~~lG~y~I~v 178 (1397)
=|.|.+.=+|.-.+ .+|....+++|.+ .+|+|++.. .|...... +-++..+|+=+-|...|.|++.+
T Consensus 46 AkLG~~FGvRy~~~---gk~~g~~pVTii~thPg~i~pdG~~~~~~~wvq~l~~G~~~~v~~feF~e~yElV~GeW~f~v 122 (137)
T 3n6y_A 46 AKLGTKFGMRYQLS---GKQEGDTPLTLLYLTPGVVTPDGQRHDKFEVVQKLVPGAPTDVMAYEFTEPHEVVKGEWRLMV 122 (137)
T ss_dssp CCTTCEEEEEECEE---SCCTTSCCEEEEEEEEEEECTTSCEEEEEEEEECCCTTCSCEEEEEECCSGGGCCCEEEEEEE
T ss_pred hhhCceeeEEEEec---CCccCCCceEEEEeCCCccCCCCceEEEEEEEEEccCCCCCceEEEEeCCceEeccccEEEEE
Confidence 35666655555444 1222233455543 489997765 46533221 22466777777999999999999
Q ss_pred EEcC-eEEEEEEEE
Q psy5522 179 NVLD-QKFTKRFTV 191 (1397)
Q Consensus 179 ~~~~-~~~~~~F~V 191 (1397)
..++ ...+++|+|
T Consensus 123 ~~~D~~L~~q~F~V 136 (137)
T 3n6y_A 123 FQGDRLLAEKSFDV 136 (137)
T ss_dssp EETTEEEEEEEEEE
T ss_pred EeCCeeEEEEEEEc
Confidence 9988 667889988
No 108
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=54.10 E-value=3.1e+02 Score=31.78 Aligned_cols=219 Identities=16% Similarity=0.185 Sum_probs=103.3
Q ss_pred eeEEEEEcCCCCCce-eEEEE--EecCceeeEeeEEEEEEeccc-------EEEEEcCCCcccCCceeEEEEEEEcCCCc
Q psy5522 58 TRIVKLDIGDLGPGQ-YNLTV--KGSGSLNFYNSTGLVYVHKSY-------SVFIQLDKAIYKPGDLVRFRAIVLNSHLK 127 (1397)
Q Consensus 58 ~~~~~f~vP~~~~~~-~~l~v--~g~~~~~f~~~~~v~~~~~~~-------~vfIqTDKpIYkPGqtV~fRvv~ld~~l~ 127 (1397)
....+..+|. .+|. +-+.+ .+..+-.|.+-..|.|..... .-.| .-..-++.|++|+||++--..+-
T Consensus 141 ~~~~~~~lP~-RsG~hVI~~vWq~~Dt~eaFY~c~DV~f~~~~~~~p~w~~~g~~-~p~~~~~~GdtV~~RvFD~~Ge~- 217 (391)
T 2xwx_A 141 RVSHECIVPE-REGYQVILAVWDVGDTAASFYNVIDVKFDGNGPVLPDWNPAGQI-IPSMDLSIGDTVYTRVFDNDGEN- 217 (391)
T ss_dssp EEEEEEEECC-CCEEEEEEEEEEESSSSEEEEEEEEEEEC------CCEEEEEEE-CCCSCCCTTCEEEEEEEETTEEC-
T ss_pred eEEEEEECcC-CCCCEEEEEEEEecCCCCCcEEEEEEEecCCCCCCCCcccCccC-cCCCCCCCCCEEEEEEecCCCCe-
Confidence 3445667887 6665 23333 222346788888888865431 1112 23447789999999999654322
Q ss_pred cCCCcceEEEEECCCCCeEEeeeee----------ccCCceeeeeeecCCCCCCeeEEEEEEEcC--eEEEEEEEEeeec
Q psy5522 128 PSVTGALEIFITDGKGNRIKQWTRA----------LTTRGVFSADLQLSKSPVLGDWNITINVLD--QKFTKRFTVAEYV 195 (1397)
Q Consensus 128 P~~~~~~~v~I~DP~g~~I~qw~~~----------~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~--~~~~~~F~VeEYv 195 (1397)
+ .....|+|.+.....-.+|... .-.-|+...+ .+ .|..|.-.|-+..++ ...+-.|+.+ =.
T Consensus 218 ~--~~~~~itI~~~~qg~~~~W~~~LA~kIN~~~~~v~aGv~~~~-~i--~p~~g~N~Vy~~~~Sg~~~~~i~~~~~-~p 291 (391)
T 2xwx_A 218 P--AYRTELKIDSETLTKANQWSYALATKINQTQKQQRAGQLNGD-QF--VPVYGTNPIYLKEGSGLKSVEIGYQIE-AP 291 (391)
T ss_dssp G--GGCCEEECCSGGGGSHHHHHHHHHHHHHHHCSSEEESEEETT-EE--ECCSSCEEEEEETTSCCCEEEEEEECC-CC
T ss_pred e--eEEEEEEEeccccCcccccHHHHHHHHhccCccEEEEEEcCC-ce--eeeccceeEEeeCCCCcEEEEEEEecc-CC
Confidence 3 3455577755421111122210 0111333332 11 456676666665433 2233333321 22
Q ss_pred CCcEEEEEeC--CCceEeeCCeEEEEEEEEEecCccccceEEEEEEeccccCccccccccceeEEeecCce-EEEEEech
Q psy5522 196 LPKFEVNVNV--PPHATFKDSKVVISVNAKYTYGKPVKGEATITAYPTIFSGVIQPLFQTPVRKVVPIDGK-TVIEFDVV 272 (1397)
Q Consensus 196 LPkFeV~v~~--p~~i~~~~~~~~v~v~AkYtyGkPV~G~v~v~v~~~~~~g~~~~~~~~~~~~~~d~~G~-~~~~~~~~ 272 (1397)
-|..++.+.- +.|+ +.+..+++++...- .|.+++++......+.. ......+-.++. ..++++++
T Consensus 292 ~p~~~l~vsgl~~eY~-i~~g~~~l~f~~~~------~~~~~v~~~v~d~~~~~-----~~~~~~~v~~~~~~~~tl~ls 359 (391)
T 2xwx_A 292 QPEYSLTVSGLAKEYE-IGEQPIQLDLTLEA------QGEMSAELTVYNHHQKP-----LASWSQAMTDGELKSITLELS 359 (391)
T ss_dssp CCCCEEEEECCCSEEE-CCSSCCEEEEEEEE------ESSEEEEEEEECTTSCE-----EEEEEEEECTTCEEEEEEECS
T ss_pred CCCceEEEecCcceeE-ecCCcEEEEEEEEe------cCceEEEEEEEcCCCCc-----cceeeEEEcCCCcceEEEEcc
Confidence 3677777773 4444 34444444443221 45554444332111110 011222333443 67888776
Q ss_pred hhhccccccceEEEEEEEEEECCcceEEeeEE
Q psy5522 273 KELQLTDEYERNIHFDVAVEEALTGRRQNNTG 304 (1397)
Q Consensus 273 ~~~~~~~~~~~~l~V~a~VtE~gTG~~~~~~~ 304 (1397)
+ .+ .....+.++++++. |..+..+.
T Consensus 360 ~-~~-----aGhh~lvv~~~~~~-G~~~~q~~ 384 (391)
T 2xwx_A 360 E-AK-----AGHHMLVSRIKDRD-GNLQDQQT 384 (391)
T ss_dssp C-CC-----SEEEEEEEEEEETT-CCEEEEEE
T ss_pred C-CC-----CccEEEEEEEECCC-CcEeeEEe
Confidence 5 33 23455555556654 66555443
No 109
>3hrz_C Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_B* 3hs0_C*
Probab=53.92 E-value=76 Score=36.87 Aligned_cols=104 Identities=12% Similarity=0.056 Sum_probs=58.9
Q ss_pred CcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC---eEEEEEEEEeeec----CCcEEEEE
Q psy5522 131 TGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD---QKFTKRFTVAEYV----LPKFEVNV 203 (1397)
Q Consensus 131 ~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~---~~~~~~F~VeEYv----LPkFeV~v 203 (1397)
+..+.|.|.-|.+.....|. +..++-...-+..|+ ..|.++|.|...| -.....+.|..=. -|.|.+.+
T Consensus 9 ~~~l~V~v~~~~~~~~~~f~-v~~~N~lllQ~~~l~---~~~~~~V~a~G~G~a~lQv~~~Ynv~~~~~~~~c~~F~L~V 84 (379)
T 3hrz_C 9 DLNLDITIELPDREVPIRYR-INYENALLARTVETK---LNQDITVTASGDGKATMTILTFYNAQLQEKANVCNKFHLNV 84 (379)
T ss_dssp CCEEEEEEECTTCSSCEEEE-EEGGGTTBCEEEEES---SCCCEEEEEEESCCEEEEEEEEEEECC-----CCCSEEEEE
T ss_pred ceeEEEEEEcCCCCccEEEE-ECCCccceeeEEEec---CCCeEEEEEEeeeEEEEEEEEEEcccCccccccCCceEEEE
Confidence 46678888888655555665 334443444445662 5799999998877 1223344441111 25688888
Q ss_pred eCCCce---EeeCCeEEEEEEEEEecCccccceEEEEEE
Q psy5522 204 NVPPHA---TFKDSKVVISVNAKYTYGKPVKGEATITAY 239 (1397)
Q Consensus 204 ~~p~~i---~~~~~~~~v~v~AkYtyGkPV~G~v~v~v~ 239 (1397)
+.-... --....+.+++|++|+- ..-.|.+-+.|.
T Consensus 85 ~~~~~~~~~~~~~~~~~l~vc~~y~g-~~~SnMaIvdV~ 122 (379)
T 3hrz_C 85 SVENIHLNAMGAKGALMLKICTRYLG-EVDSTMTIIDIS 122 (379)
T ss_dssp EEEECCCC----CCCEEEEEEEEECS-SSCEEEEEEEEE
T ss_pred EeeccccCccccccEEEEEEEEEeCC-CCCCceEEEEEe
Confidence 752110 01234689999999974 333455544443
No 110
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=52.43 E-value=42 Score=33.12 Aligned_cols=59 Identities=20% Similarity=0.227 Sum_probs=40.6
Q ss_pred CceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 112 GDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 112 GqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
|+...|-+-++|. ....+.+.|.+|++..+. ......| +.-+|. |.+ .|.|.|.++.++
T Consensus 61 g~~~~F~V~t~da-----G~g~l~v~I~gPs~~~~~---~~d~~dG-y~V~Yt-P~~--~G~y~I~Vk~~g 119 (138)
T 2nqc_A 61 GVSSEFIVNTLNA-----GSGALSVTIDGPSKVQLD---CRECPEG-HVVTYT-PMA--PGNYLIAIKYGG 119 (138)
T ss_dssp TSCEEEEEECTTS-----CSCCEEEEEESSSCCEEE---EEEETTE-EEEEEE-CCS--CEEEEEEEEESS
T ss_pred CCCeEEEEEEcCC-----CCCcEEEEEECCCCCeee---EEECCCc-EEEEEE-cCC--CEEEEEEEEECC
Confidence 4444454444443 245678889999987654 2345678 999998 554 499999999876
No 111
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=52.22 E-value=19 Score=34.04 Aligned_cols=61 Identities=11% Similarity=0.145 Sum_probs=42.9
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.|+...|-+-++|.. ...+.|.|..|.+..+ .......|.+..+|.. .++ |.|.|.+..++
T Consensus 26 vg~~~~F~V~t~dag-----~g~l~v~v~gp~~~~~---~v~d~~dGty~v~Y~p-~~~--G~y~I~V~~~g 86 (111)
T 2di8_A 26 TFEMSDFIVDTRDAG-----YGGISLAVEGPSKVDI---QTEDLEDGTCKVSYFP-TVP--GVYIVSTKFAD 86 (111)
T ss_dssp TTCCEEEEEECTTTC-----BCCEEEEEESSSCCCE---ECCBCTTSCEEEEECC-CSC--SEEEEEEEESS
T ss_pred cCCCEEEEEEECCCC-----CCceEEEEEcCCCceE---EEEECCCCEEEEEEEe-CCC--eEEEEEEEECC
Confidence 455566666555552 3456788889987544 3355678999999975 443 99999999886
No 112
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=49.52 E-value=19 Score=33.64 Aligned_cols=64 Identities=6% Similarity=0.131 Sum_probs=46.7
Q ss_pred cCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 110 KPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 110 kPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
..|+...|-+-..+. ....+.+.|.+|+|..+.- ......+|.+..+|.-.+ .|.|+|.+..++
T Consensus 14 ~vG~~~~ftv~~~~a-----g~~~l~v~v~~P~G~~~~~-~v~d~~dGty~v~ytP~e---~G~h~v~V~~~g 77 (102)
T 2dlg_A 14 TVGSICDLNLKIPEI-----NSSDMSAHVTSPSGRVTEA-EIVPMGKNSHCVRFVPQE---MGVHTVSVKYRG 77 (102)
T ss_dssp CSSSCBCCEEECTTS-----CGGGCEEEEECTTSCEEEC-EEEECSSSEEEEEBCCCT---TCEEEEEEESSS
T ss_pred cCCCceEEEEEecCC-----CCCCEEEEEECCCCCEeee-EEEECCCCEEEEEEEecC---CEeEEEEEEECC
Confidence 456666666554432 3466899999999986543 345677899999998443 499999999887
No 113
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=49.25 E-value=37 Score=31.01 Aligned_cols=48 Identities=13% Similarity=0.075 Sum_probs=38.5
Q ss_pred CcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 131 TGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 131 ~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
...+++.|.+|+|..+. -....+..|.+..+|.-.+ .|.|+|.++.++
T Consensus 21 ~~~l~v~V~~PsG~~~~-~~v~d~~dGtY~v~ytP~e---~G~h~v~V~~~g 68 (93)
T 2d7n_A 21 KGELTGEVRMPSGKTAR-PNITDNKDGTITVRYAPTE---KGLHQMGIKYDG 68 (93)
T ss_dssp SSCEEEEEECTTSCEEC-CEEEECSSSCEEEEECCSS---CEEEEEEEEESS
T ss_pred CCCEEEEEECCCCCccc-eEEEECCCCEEEEEEEccC---CEEEEEEEEECC
Confidence 56789999999998653 3345678899999998544 499999999987
No 114
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=47.83 E-value=11 Score=36.73 Aligned_cols=68 Identities=9% Similarity=0.009 Sum_probs=48.5
Q ss_pred ccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 109 YKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 109 YkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
...|+...|-+-+.|... .....+.+.|.+|+|..+.- .......|.+..+|...+ .|.|+|.+..++
T Consensus 36 ~~~g~~~~F~V~~~d~~~--~G~~~~~v~i~~p~g~~~~~-~v~d~~dGty~v~Y~p~~---~G~~~i~V~~~g 103 (128)
T 2dib_A 36 VFREATTDFTVDSRPLTQ--VGGDHIKAHIANPSGASTEC-FVTDNADGTYQVEYTPFE---KGLHVVEVTYDD 103 (128)
T ss_dssp CCTTCCEEEEEECSSSCS--SCCSCCCEECCCSSSCCCCC-EEEECSSSEEEEEECCSS---CSEEEEEEBSSS
T ss_pred eEecccEEEEEEECCCCc--CCCccEEEEEECCCCCEeee-EEEECCCCEEEEEEEeCC---CEeEEEEEEECC
Confidence 345677777766665432 23567889999999875432 234567899999998655 599999999876
No 115
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=47.58 E-value=30 Score=33.71 Aligned_cols=60 Identities=17% Similarity=0.209 Sum_probs=43.3
Q ss_pred CceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 112 GDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 112 GqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
|+...|-+-++|.. ...+.+.|.+|.+..+. ......|.+..+|... + .|.|.|.+..++
T Consensus 47 g~~~~F~V~t~dag-----~~~l~v~v~gp~~~~~~---v~d~~dGty~v~Y~p~-~--~G~y~I~V~~~g 106 (131)
T 2di9_A 47 GKPAEFTIDTKGAG-----TGGLGLTVEGPCEAKIE---CSDNGDGTCSVSYLPT-K--PGEYFVNILFEE 106 (131)
T ss_dssp TSCEEEEEECTTTC-----SSCEEEEECSSSCCEEE---EEECSSSEEEEEEECS-S--SSEEEEEEEESS
T ss_pred CCeEEEEEEEcCCC-----CCeeEEEEEecCCceEE---EEECCCCEEEEEEEeC-C--CeeEEEEEEECC
Confidence 66666666665542 45677888899886442 3456779999999854 3 499999999986
No 116
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=45.79 E-value=86 Score=29.47 Aligned_cols=59 Identities=15% Similarity=0.149 Sum_probs=41.9
Q ss_pred CcceEEEEE-CCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEc-CeEEEEEEEEe
Q psy5522 131 TGALEIFIT-DGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVL-DQKFTKRFTVA 192 (1397)
Q Consensus 131 ~~~~~v~I~-DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~-~~~~~~~F~Ve 192 (1397)
-..++|.|. |..|+.|.+-........ ...+.|.. -..|.|.|....+ +......|.+|
T Consensus 48 ~~~vtItI~~~~tG~iVY~~~v~~~~~~--~~~I~L~~-~~~G~Y~L~i~~~~~~~l~G~F~ie 108 (108)
T 3d33_A 48 DRDMTIRITDMAKGGVVYENDIPEVQSA--YITISIAN-FPAEEYKLEITGTPSGHLTGYFTKE 108 (108)
T ss_dssp CSEEEEEEEETTTCCEEEEEEECGGGTT--EEEEECTT-SCSEEEEEEEEEESSCEEEEEEEEC
T ss_pred CCCEEEEEEECCCCcEEEEEeecCCCCc--EEEEEcCC-ccCceEEEEEEeCCCCEEEEEEEeC
Confidence 477899999 889999988654333223 34455554 4589999999988 55566777764
No 117
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=44.08 E-value=4e+02 Score=30.22 Aligned_cols=140 Identities=12% Similarity=0.119 Sum_probs=74.8
Q ss_pred eEEEEEEecccEEEEEcCCCcccCCceeEEEEEEEcC-CCccCCCcceEEEEEC------CCCCeEE-----eeeee--c
Q psy5522 88 STGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNS-HLKPSVTGALEIFITD------GKGNRIK-----QWTRA--L 153 (1397)
Q Consensus 88 ~~~v~~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~-~l~P~~~~~~~v~I~D------P~g~~I~-----qw~~~--~ 153 (1397)
++.+.++..... ...-|+|.|||+|.=+|...-. +-++..-..+.|++.. .+++.+. .|... .
T Consensus 26 ~~~~~~~~~~~~---~~~~~vY~~GE~VsG~V~I~~~~~gk~l~h~GIki~~~G~~e~~~~~~~~~~fls~~~eL~~~G~ 102 (341)
T 2fau_A 26 RKMAEMKTEDGK---VEKHYLFYDGESVSGKVNLAFKQPGKRLEHQGIRIEFVGQIELFNDKSNTHEFVNLVKELALPGE 102 (341)
T ss_dssp SCEEEEECTTSC---EEEEEEECTTCCEEEEEEEEESSSSCCEEESCEEEEEEEEEEECSTTCCEEEEEEEEEEEECSEE
T ss_pred cceEEeecCCCc---eeccCcCCCCCEEEEEEEEEECCCCCeeeEEEEEEEEEEEEEEEecCCCcEEEEEEEEEEcCCCc
Confidence 345555555443 2345899999999999865443 3444433444554431 2233321 12211 1
Q ss_pred cCCc-eeeeeeecCCCCC---Ce-----eEEEEEEEcC----eEEEEEEEEeeecCC-------cEEEEEeCCCceEeeC
Q psy5522 154 TTRG-VFSADLQLSKSPV---LG-----DWNITINVLD----QKFTKRFTVAEYVLP-------KFEVNVNVPPHATFKD 213 (1397)
Q Consensus 154 ~~~G-i~~~sf~L~~~~~---lG-----~y~I~v~~~~----~~~~~~F~VeEYvLP-------kFeV~v~~p~~i~~~~ 213 (1397)
...| .+.++|++++.+. .| .|.|+|...- ...+..|.|..+--+ +|||.+ +
T Consensus 103 L~~g~~fpF~F~~~~~~~eSy~G~~~~IrY~vrv~i~R~~~di~~~~eF~V~~~~~~p~~~~pi~~evgi---------e 173 (341)
T 2fau_A 103 LTQSRSYDFEFMQVEKPYESYIGANVRLRYFLKVTIVRRLTDLVKEYDLIVHQLATYPDVNNSIKMEVGI---------E 173 (341)
T ss_dssp ECSCEEEEEEECSCCCCSCCEECSSEEEEEEEEEEECCSSSCEEEEEEEEECCCBCCCCCCCCEEEEEEE---------T
T ss_pred cCCCcEEeeEeCCCCCCCcceEeeEEEEEEEEEEEEEecCcceeEEEEEEEEeCCCCCCCCCCeEEEEec---------c
Confidence 1223 4666777754332 24 4888888763 567889999875321 233222 1
Q ss_pred CeEEEEE---EEEEecCccccceEEEEEE
Q psy5522 214 SKVVISV---NAKYTYGKPVKGEATITAY 239 (1397)
Q Consensus 214 ~~~~v~v---~AkYtyGkPV~G~v~v~v~ 239 (1397)
+.+.+++ +..|.-|.++.|++.+..+
T Consensus 174 d~L~ieF~~~ks~y~l~d~I~G~I~f~~s 202 (341)
T 2fau_A 174 DXLHIEFEYNKSKYHLKDVIVGKIYFLLV 202 (341)
T ss_dssp TTEEEEEEESCSEEETTCEEEEEEEEEEE
T ss_pred ccEEEEEEEccccccCCCeEEEEEEEEEe
Confidence 2233332 3467778888887655433
No 118
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=41.49 E-value=3.1e+02 Score=28.13 Aligned_cols=48 Identities=13% Similarity=0.096 Sum_probs=38.0
Q ss_pred CcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 131 TGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 131 ~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
...++++|.+|+|+.+.- .......|.+..+|.- .+ .|.|+|.+..++
T Consensus 33 ~~~v~~~v~~PsG~~~~~-~v~d~~dgty~v~y~P-~~--~G~h~i~V~~~g 80 (188)
T 2k7p_A 33 KGEITGEVRMPSGKVAQP-TITDNKDGTVTVRYAP-SE--AGLHEMDIRYDN 80 (188)
T ss_dssp SSCEEEEEECTTSCEECC-EEEECSSSEEEEEECC-CC--CEEEEEEEEETT
T ss_pred CceEEEEEECCCCCcccc-EEEeCCCCEEEEEEEc-cc--cEeEEEEEEECC
Confidence 567899999999987642 2345678999999995 43 499999999987
No 119
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=41.39 E-value=46 Score=34.55 Aligned_cols=61 Identities=16% Similarity=0.184 Sum_probs=46.8
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.|+...|.+-++|.. ...+.+.|.+|++..+. ......|.+..+|.... .|.|.|.+..++
T Consensus 112 vg~~~~F~V~t~dag-----~g~l~v~I~gp~~~~~~---~~d~~dGty~v~Y~p~~---~G~y~i~V~~~g 172 (188)
T 2k7p_A 112 VNKPATFTVNTKDAG-----EGGLSLAIEGPSKAEIS---CTDNQDGTCSVSYLPVL---PGDYSILVKYNE 172 (188)
T ss_dssp TTSCEEEEEECTTCC-----SSCEEEEEECSSCCEEE---EEECTTSEEEEEEECCS---SEEEEEEEEETT
T ss_pred eCccEEEEEEeCCCC-----CCCeEEEEeCCCCCeEE---EEECCCCEEEEEEEeCC---CEEEEEEEEECC
Confidence 467788888777763 45678899999986553 34567899999998643 499999999886
No 120
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=40.95 E-value=15 Score=34.85 Aligned_cols=61 Identities=18% Similarity=0.301 Sum_probs=42.4
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.|+...|-+-++|.. ...+.|.|.+|++..+ ......+|.+..+|.. .++ |.|.|.+..++
T Consensus 26 vg~~~~F~V~t~dag-----~~~l~v~v~gp~~~~~---~v~d~~dGty~V~Y~p-~~~--G~y~I~V~~~g 86 (111)
T 2d7o_A 26 VNKPATFTIVTKDAG-----EGGLSLAVEGPSKAEI---TCKDNKDGTCTVSYLP-TAP--GDYSIIVRFDD 86 (111)
T ss_dssp TTSCEEEEEECTTTC-----SSCBCCEEESSSCCCB---CCCCCSSSEEEEEECC-SSC--EEEEEECBBSS
T ss_pred cCCCEEEEEEECCCC-----CCcEEEEEECCCCceE---EEEECCCCEEEEEEEe-CCC--eEEEEEEEECC
Confidence 455566666555553 3456778889987544 2355677999999975 443 99999999876
No 121
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.57 E-value=58 Score=29.90 Aligned_cols=49 Identities=10% Similarity=0.083 Sum_probs=39.0
Q ss_pred CCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 130 VTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 130 ~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
....+++.|.+|+|..+. -....+..|.+..+|.- .+ .|.|+|.++.++
T Consensus 28 g~~~ltv~V~~PsG~~~~-~~v~d~~dGtY~v~ytP-~e--~G~h~v~V~~~G 76 (95)
T 2ee9_A 28 RKGEITGEVHMPSGKTAT-PEIVDNKDGTVTVRYAP-TE--VGLHEMHIKYMG 76 (95)
T ss_dssp CTTSEEEEEECTTSCEEC-CEEEECSSSCEEEECCC-CS--SEEEEEEEEESS
T ss_pred CCCCEEEEEECCCCCccc-cEEEeCCCCeEEEEEEe-cC--CEeEEEEEEECC
Confidence 457889999999997654 33456788999999984 43 599999999987
No 122
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=37.99 E-value=15 Score=35.10 Aligned_cols=65 Identities=12% Similarity=0.092 Sum_probs=46.8
Q ss_pred ccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 109 YKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 109 YkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
-..|+...|-+-..+. ....+.+.|.+|+|..+.- .......|.+..+|. |.+ .|.|+|.+..++
T Consensus 27 ~~vg~~~~f~v~~~~a-----g~~~l~v~v~~PsG~~~~~-~v~~~~~g~y~v~ft-P~e--~G~h~v~V~~~g 91 (116)
T 2dmc_A 27 VKLGSAADFLLDISET-----DLSSLTASIKAPSGRDEPC-LLKRLPNNHIGISFI-PRE--VGEHLVSIKKNG 91 (116)
T ss_dssp CCTTSCEEEECCCSCC-----CSTTBCCEEECTTSCBCCE-EEEEETTTEEEEEEC-CCS--CEEEEEECBBSS
T ss_pred cccCCceEEEEEecCC-----CCCCEEEEEECCCCCEEee-EEEeCCCCeEEEEEE-eCC--CeeEEEEEEECC
Confidence 4467777776544332 2456789999999976542 345567899999998 443 599999999987
No 123
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.66 E-value=88 Score=30.12 Aligned_cols=59 Identities=15% Similarity=0.165 Sum_probs=39.4
Q ss_pred CceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 112 GDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 112 GqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
|+...|-+-++|. ....+.+.|.+|.+..+.- .....| +.-+|.... .|.|.|.++.++
T Consensus 37 g~~~~F~v~t~da-----G~~~l~v~i~gp~~~~~~~---~d~~dG-y~V~Y~P~~---~G~y~I~V~~~g 95 (125)
T 2eec_A 37 GIQSEFFINTTRA-----GPGTLSVTIEGPSKVKMDC---QETPEG-YKVMYTPMA---PGNYLISVKYGG 95 (125)
T ss_dssp TSCEEEEEECTTT-----CSCCEEEEEESSSCCCCEE---EECSSS-EEEEECCSS---CEEEEEEEEESS
T ss_pred CCcEEEEEEEcCC-----CCCcEEEEEECCCCCccee---EECCCC-EEEEEEcCC---CeEEEEEEEECC
Confidence 3444444444443 2456788889998875532 245678 888888633 599999999876
No 124
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.48 E-value=1.9e+02 Score=26.74 Aligned_cols=71 Identities=13% Similarity=0.065 Sum_probs=42.3
Q ss_pred ccCCCeEEEEEEEEccCCCccCCCCceEEEEEeeeccccccceeeEeeCCCeeEEEEEeCCCCCceeEEEEE
Q psy5522 324 FKPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGMIKLVYYPPANENVTTLGIE 395 (1397)
Q Consensus 324 ~kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~ 395 (1397)
...|.+..+.|.+.|.+|.+...-...+.+.+...-........+..-..||...+++.+. ..+.|.|.|+
T Consensus 24 ~~~g~~~~F~V~~~d~~G~~~~~Gg~~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~-~~G~y~i~V~ 94 (113)
T 2ds4_A 24 AREKQTASFTLLCKDAAGEIMGRGGDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPK-EPGVYTVWVC 94 (113)
T ss_dssp EETTCCEEEEEECBBTTSSBCCCCCCCEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECS-SSEEEEEEEE
T ss_pred eecCCcEEEEEEEECCCCCCcccCCceEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeC-CCeEEEEEEE
Confidence 4568888999999999999875222345554421100001223345556789988888776 4466444443
No 125
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=34.02 E-value=2.1e+02 Score=29.37 Aligned_cols=48 Identities=10% Similarity=0.072 Sum_probs=37.8
Q ss_pred CcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 131 TGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 131 ~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
...++++|.+|+|+.+.-. ......|.+..+|. |.+ .|.|.|.+..++
T Consensus 30 ~~~l~v~v~~PsG~~~~~~-v~~~~~g~y~v~ft-P~~--~G~~~i~V~~~g 77 (191)
T 2k7q_A 30 LSLLTATVVPPSGREEPCL-LKRLRNGHVGISFV-PKE--TGEHLVHVKKNG 77 (191)
T ss_dssp SSSEEEEEECTTSCCEECE-EEECTTSCEEEECC-CSS--SEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCEEeeE-EEECCCCEEEEEEE-ccC--CEeEEEEEEECC
Confidence 4678999999999876533 24467789999988 544 699999999987
No 126
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=30.78 E-value=2.5e+02 Score=26.00 Aligned_cols=57 Identities=21% Similarity=0.221 Sum_probs=42.7
Q ss_pred CcceEEEEECC-CCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcCeEEEEEEEEe
Q psy5522 131 TGALEIFITDG-KGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLDQKFTKRFTVA 192 (1397)
Q Consensus 131 ~~~~~v~I~DP-~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~~~~~~~F~Ve 192 (1397)
-..++|.|.|- .|+.|..-... . + -..++.|..+. .|.|.|.....+..-+..|+++
T Consensus 44 ~~~vTItItNe~TG~~VYs~~~s--~-p-~~i~IdLnge~-sG~Y~IeI~~~~~~LtG~F~i~ 101 (101)
T 3sd2_A 44 KDYAIITVTNKATGEIVHSKTYH--N-T-SIVMIDMSSCE-KGEYTIHIILNDCLLEGTFTVQ 101 (101)
T ss_dssp CSCEEEEEEETTTCCEEEEEEES--S-C-SEEEEECTTSC-SEEEEEEEEETTEEEEEEEEEC
T ss_pred CCcEEEEEEECCCCcEEEEEecc--C-C-cEEEEEcCCCc-CceEEEEEEeCCcEEEEEEEeC
Confidence 46789999997 79999875322 2 2 24688888664 8999999999876667788764
No 127
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=29.97 E-value=69 Score=33.21 Aligned_cols=155 Identities=15% Similarity=0.105 Sum_probs=82.6
Q ss_pred CeeecCCeEEEEEEeecCCccEEEEEEEEeecCCCCeeEEeEEEEECCCceeEEEEEcCCCCCceeEEEEEecCceeeEe
Q psy5522 8 KVLRPNGEYHVAVSTQAVSEATQVSVEVGGKQDSGGEFRTKQLLSVDPFSTRIVKLDIGDLGPGQYNLTVKGSGSLNFYN 87 (1397)
Q Consensus 8 ~~lr~g~~~~v~v~l~~~~~~v~v~v~L~~~~~~~~~~~~~~~~~~~~~~~~~~~f~vP~~~~~~~~l~v~g~~~~~f~~ 87 (1397)
+.+..|++-.+.|.+.+.. .-.+++.+..+ +|.. ..-.+....+....+.|. | ...|.|.|.|+-. +.....
T Consensus 11 s~~~vG~~~~f~v~~~~~~-~~~l~v~v~~P--sG~~--~~~~v~~~~~g~y~v~ft-P-~~~G~~~i~V~~~-g~~V~g 82 (191)
T 2k7q_A 11 SHLKVGSAADIPINISETD-LSLLTATVVPP--SGRE--EPCLLKRLRNGHVGISFV-P-KETGEHLVHVKKN-GQHVAS 82 (191)
T ss_dssp EEEEEEECCCEECSCSSCC-SSSEEEEEECT--TSCC--EECEEEECTTSCEEEECC-C-SSSEEEEEEEEET-TEECTT
T ss_pred cceecCCceEEEEEcCCCC-CCcEEEEEECC--CCCE--EeeEEEECCCCEEEEEEE-c-cCCEeEEEEEEEC-CEECCC
Confidence 3455666666777666533 23466666654 1222 122232234444445553 2 2345677777652 211111
Q ss_pred e-EEEEEEe----cccEEEEEcCCCc--ccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceee
Q psy5522 88 S-TGLVYVH----KSYSVFIQLDKAI--YKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFS 160 (1397)
Q Consensus 88 ~-~~v~~~~----~~~~vfIqTDKpI--YkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~ 160 (1397)
+ -.+.+.+ ....+-+.-+ .+ -..|+...|.+-++|.. ...+.+.|..|.+..+ .......|.+.
T Consensus 83 SPf~v~V~~~~~~d~~~~~~~G~-Gl~~~~~g~~~~F~V~t~dag-----~g~l~v~V~gp~~~~~---~v~d~~dGty~ 153 (191)
T 2k7q_A 83 SPIPVVISQSEIGDASRVRVSGQ-GLHEGHTFEPAEFIIDTRDAG-----YGGLSLSIEGPSKVDI---NTEDLEDGTCR 153 (191)
T ss_dssp CSEEEEECGGGTTCGGGCEEESG-GGTEEESSSCEEEEEECGGGC-----SEEEEEEEEESSCEEE---EEEECTTSCEE
T ss_pred CCEEEEEcccCCCCcceEEEeCc-cccceecCCcEEEEEEeCCCC-----CCceEEEEECCCCceE---EEEECCCCEEE
Confidence 1 0111111 0011111100 00 13567788888887762 4457788889987543 33456779999
Q ss_pred eeeecCCCCCCeeEEEEEEEcC
Q psy5522 161 ADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 161 ~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.+|.... .|.|.|.+..++
T Consensus 154 v~Y~p~~---~G~y~i~V~~~g 172 (191)
T 2k7q_A 154 VTYCPTE---PGNYIINIKFAD 172 (191)
T ss_dssp EEEEESS---CEEEEEEEEETT
T ss_pred EEEEeCC---CceEEEEEEECC
Confidence 9999644 499999999886
No 128
>2di7_A BK158_1; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.09 E-value=18 Score=35.08 Aligned_cols=75 Identities=8% Similarity=0.069 Sum_probs=50.3
Q ss_pred EEEEEEcCCCccC----CCcceEEEEECCCCCeEEee-eeeccCCceeeeeeecCCCCCCeeEEEEEEEcCe-EEEEEEE
Q psy5522 117 FRAIVLNSHLKPS----VTGALEIFITDGKGNRIKQW-TRALTTRGVFSADLQLSKSPVLGDWNITINVLDQ-KFTKRFT 190 (1397)
Q Consensus 117 fRvv~ld~~l~P~----~~~~~~v~I~DP~g~~I~qw-~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~~-~~~~~F~ 190 (1397)
|-+-++|.+-.+. .+..+.|.|..|++....=| ....+..|.+..+|.+|.+ .|.|+|.+...++ .....|.
T Consensus 38 F~Iq~~D~~G~~~t~g~g~~~f~V~I~~~~~~~~~i~~~v~Dn~DGsy~v~Yr~~~~--~g~~~I~V~~~~~hI~gSPf~ 115 (124)
T 2di7_A 38 FYIQAVDTSGNKFTSSPGEKVFQVKVSAPEEQFTRVGVQVLDRKDGSFIVRYRMYAS--YKNLKVEIKFQGQHVAKSPYI 115 (124)
T ss_dssp CBCCCEETTSCBCCSCCCSSCCEEEEECSSCCCCCCCCEEECCSSSCCEEECCCCSC--CSCCEEEEESSSCBCSSCSEE
T ss_pred EEEEEEeCCCCEeeeCCCCCceEEEEecCCCCceEeeeEEEECCCCeEEEEEECCCC--CCCEEEEEEECCEecCCCCEE
Confidence 4444566655443 25678888888877433323 3456678999999999988 6999999998762 2222455
Q ss_pred Eee
Q psy5522 191 VAE 193 (1397)
Q Consensus 191 VeE 193 (1397)
|++
T Consensus 116 v~g 118 (124)
T 2di7_A 116 LKG 118 (124)
T ss_dssp CCS
T ss_pred Eec
Confidence 554
No 129
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=28.84 E-value=94 Score=33.98 Aligned_cols=54 Identities=13% Similarity=0.179 Sum_probs=33.7
Q ss_pred cCCCeEEEEEEEEccCCCccCCCCceEEEEEee---eccc------cccceeeEeeCCCeeEEEE
Q psy5522 325 KPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGF---SYDE------SKYEANQYKLDRNGMIKLV 380 (1397)
Q Consensus 325 kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~---~~~~------~~~~~~~~ttd~~G~~~f~ 380 (1397)
.+|.|..+.-+|+|.+|+|+++. .|.+=-.+ .|.. .........||++|...|.
T Consensus 95 ~~G~pl~v~G~V~D~~G~Pv~gA--~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~ 157 (260)
T 3th1_A 95 DDHKPLIIRGTVRSDTGELLAGA--VIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVR 157 (260)
T ss_dssp TTCCEEEEEEEEEETTSCBCSSC--EEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEE
T ss_pred CCCCEEEEEEEEECCCCCCcCCc--EEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEE
Confidence 47899999999999999999953 45442110 1110 0112345667777766664
No 130
>4ayb_E DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2y0s_E 4b1o_E 4b1p_T 2waq_E 2wb1_E 2pmz_E 3hkz_E
Probab=28.42 E-value=48 Score=34.14 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=21.3
Q ss_pred CCCcccCCceeEEEEEEEcCCCccCCCcceEEEEEC
Q psy5522 105 DKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITD 140 (1397)
Q Consensus 105 DKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~D 140 (1397)
.+-.|+.||.|++|++.+|.+.++. ...+.+.+..
T Consensus 132 ~~~~~~~Gd~VrvkV~~v~~~~~~~-~~rI~ls~k~ 166 (180)
T 4ayb_E 132 SKKVIQKGDKVRARVISVASTVTGR-LPRIALTMRQ 166 (180)
T ss_dssp TCCCCCTTCEEEEEEEEECC--------CEEEECCS
T ss_pred cCeEECCCCEEEEEEEEEeCCCCcc-cCcEEEEcCC
Confidence 4457999999999999998765552 3344455443
No 131
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=28.04 E-value=1.6e+02 Score=38.10 Aligned_cols=67 Identities=16% Similarity=0.084 Sum_probs=45.0
Q ss_pred CCEEEEEEEEEcCC-CccEEEEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeEEEEEEE-eceeee
Q psy5522 728 GEVVAIPVVVFNYL-SQDLVADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGSTTTFVIT-PKELGY 803 (1397)
Q Consensus 728 GE~~~l~~~VfNyl-~~~~~v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~-p~~lG~ 803 (1397)
++.+.+.++|.|-. +.+.+=.|.|...+...-+ ..|......-+++.|++|++++|.|.|. +..+.-
T Consensus 734 ~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~---------~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~l~~ 802 (845)
T 3abz_A 734 DDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKV---------SRPVKELKGFEKVHLEPGEKKTVNIDLELKDAISY 802 (845)
T ss_dssp SSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSS---------CCCSCEEEEEEEEEECTTCEEEEEEEEEHHHHHCE
T ss_pred CCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCc---------chhhheeccceeEEECCCCEEEEEEEeCChHHeeE
Confidence 88999999999999 8777766666554322100 0111122334567899999999999999 655543
No 132
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=27.94 E-value=1e+02 Score=39.11 Aligned_cols=68 Identities=12% Similarity=0.029 Sum_probs=45.9
Q ss_pred CCEEEEEEEEEcCCCccEEEEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEE-EEeCCCeeEEEEEEEeceeeeE
Q psy5522 728 GEVVAIPVVVFNYLSQDLVADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKL-TIKANSGSTTTFVITPKELGYI 804 (1397)
Q Consensus 728 GE~~~l~~~VfNyl~~~~~v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~a~~~~tv~f~v~p~~lG~v 804 (1397)
++.+.+.++|.|-.+.+.+=.|.|..++...- ...|......-+++ .|.+|++++|.|.|.+..+.-.
T Consensus 614 ~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~---------~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~~~l~~~ 682 (721)
T 2x41_A 614 GETLRVQYRIENTGGRAGKEVSQVYIKAPKGK---------IDKPFQELKAFHKTRLLNPGESEEVVLEIPVRDLASF 682 (721)
T ss_dssp SSEEEEEEEEEECSSSCBCCEEEEEEECCCSS---------SCCCSCEEEEEEECCCBCTTCEEEEEEEEEGGGGCEE
T ss_pred CCeEEEEEEEEECCCCCCcEEeeEEEccCCCC---------CCCchHHhhcccccccCCCCCeEEEEEEECHHHhcEE
Confidence 88999999999999887775566655442210 00111122334567 8999999999999998766543
No 133
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=27.15 E-value=1.3e+02 Score=28.27 Aligned_cols=57 Identities=11% Similarity=0.127 Sum_probs=30.6
Q ss_pred cCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEE
Q psy5522 110 KPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINV 180 (1397)
Q Consensus 110 kPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~ 180 (1397)
+.||++.+.+ . . ......|..|.++....-... ....--+.+..||. -|+|+|+|..
T Consensus 35 ~aGQ~l~v~l---~----s---~~~~~~i~~pg~~~~~~~~~~-~~~~~~~~~~~LP~---sG~Y~I~V~~ 91 (111)
T 4g9s_B 35 KKGQKVHVSI---S----N---EGADTYLFGPGIDDSVDLSRY-SPELDSHGQYSLPA---SGKYELRVLQ 91 (111)
T ss_dssp CTTCEEEEEE---S----C---TTCEEEEECTTCSSCEECSTT-CTTCCTTSCEECSS---SEEEEEEEEC
T ss_pred cCCCEEEEEE---e----c---CCccEEEECCCCccccccccc-cccCCceEEEEecC---CccEEEEEEe
Confidence 4788877753 1 1 123455778876543321111 11111234556766 4999999964
No 134
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=26.58 E-value=1e+02 Score=34.27 Aligned_cols=61 Identities=16% Similarity=0.141 Sum_probs=45.7
Q ss_pred CCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 111 PGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 111 PGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
.|+...|.+.++|. ....+.|.|.+|.+..+.- .....|.+..+|.... .|.|.|.+..++
T Consensus 21 ~g~~~~F~I~~~da-----g~g~l~v~i~~p~~~~~~~---~d~~dGty~v~y~p~~---~G~y~i~V~~~g 81 (288)
T 2j3s_A 21 TFEPAEFIIDTRDA-----GYGGLSLSIEGPSKVDINT---EDLEDGTCRVTYCPTE---PGNYIINIKFAD 81 (288)
T ss_dssp TTSCEEEEEECTTS-----BSCCEEEEEESSSCCEEEE---EECTTSEEEEEEECSS---CEEEEEEEEETT
T ss_pred CCCcEEEEEEeccC-----CCCcEEEEEECCCCceeEE---EECCCCEEEEEEECCC---CeEEEEEEEECC
Confidence 56777787777665 2455788899998865532 3467899999999643 499999999987
No 135
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=26.10 E-value=7.7e+02 Score=31.41 Aligned_cols=105 Identities=11% Similarity=0.018 Sum_probs=61.7
Q ss_pred ceEEeeEEEEEEEEeeeEEEEEecCCcccCC--CeEEEEEEEEccCCCccCCCCceEEEEEeee--c---cc-----ccc
Q psy5522 297 GRRQNNTGSVVFHKHKYKMDLIKSSEYFKPG--LKYTAYMKLTHHDGTPVTDNNNMVQVRHGFS--Y---DE-----SKY 364 (1397)
Q Consensus 297 G~~~~~~~~i~i~~~~~~i~f~~~~~~~kpG--~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~--~---~~-----~~~ 364 (1397)
|..+. +..+.-...+.+|.+......++.. .-..+.|.++|.+|.+++..+..|++.+... + +. ...
T Consensus 676 Gk~v~-~~~~~tag~~~~l~l~~d~~~l~adg~Dl~~v~v~v~D~~G~~~p~a~~~v~f~v~G~g~l~g~~ng~~~~~~~ 754 (801)
T 3gm8_A 676 GKIVA-TDCYQSAEAPHSVALASNKYSVKAGSDEVIRIEIDITDKNGIPCPYASNELSFHVSGPLRLLGVDNGNPTDMFP 754 (801)
T ss_dssp TEEEE-EEEEECCCSEEEEEEEESCSBCCTTSCCCEEEEEEEEETTSCBCTTCCCEEEEEEESSEEEEEEECCCTTCCCC
T ss_pred CEEEE-EEEEecCCCCeEEEEEEccccccCCCceEEEEEEEEEeCCCCCcCCCCCeEEEEEecCEEEEeccCCCcccccc
Confidence 55443 3334444456777777665555554 3468899999999999997777787776421 0 00 011
Q ss_pred ceeeEeeCCCeeEEEEEeCCCCCceeEEEEEEEecCcceE
Q psy5522 365 EANQYKLDRNGMIKLVYYPPANENVTTLGIEAEYLDIKEW 404 (1397)
Q Consensus 365 ~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~a~~~~~~~~ 404 (1397)
+...-..-.+|.+.+-+......+. ++|+|+.+.-..+
T Consensus 755 ~~~~~~~~~~G~a~~~vrs~~~~G~--i~v~a~~~gl~~~ 792 (801)
T 3gm8_A 755 YQQPHCRCFRGKCVVLLQSDEEKGK--GTLTVQGTKLVEK 792 (801)
T ss_dssp TTSSEEECBTTEEEEEEEECSSCSE--EEEEEECTTSBCE
T ss_pred cCCCccEeeCCEEEEEEEeCCCCcc--EEEEEEECCCCcE
Confidence 1111223357888888876543444 7777765544333
No 136
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=26.04 E-value=1.2e+02 Score=33.01 Aligned_cols=54 Identities=17% Similarity=0.258 Sum_probs=33.9
Q ss_pred cCCCeEEEEEEEEccCCCccCCCCceEEEEEee---ecccc------ccceeeEeeCCCeeEEEE
Q psy5522 325 KPGLKYTAYMKLTHHDGTPVTDNNNMVQVRHGF---SYDES------KYEANQYKLDRNGMIKLV 380 (1397)
Q Consensus 325 kpG~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~---~~~~~------~~~~~~~ttd~~G~~~f~ 380 (1397)
.+|.|..+..+|+|.+|+|+++. .|.+--.+ .|+.. ........||++|...|.
T Consensus 98 ~~G~~l~l~G~V~D~~G~Pv~~A--~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~ 160 (254)
T 2boy_A 98 ESGDTLIFRGEVVDQEGAPLADV--LLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLR 160 (254)
T ss_dssp CCSCEEEEEEEEECTTSCBCCSC--EEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEE
T ss_pred CCCCEEEEEEEEECCCCCCCCCC--EEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEE
Confidence 57999999999999999999953 45442110 11100 111334667777777665
No 137
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=25.86 E-value=1.4e+02 Score=29.28 Aligned_cols=35 Identities=20% Similarity=0.033 Sum_probs=24.5
Q ss_pred EeceeeeEEEEEEEEeCCCCceeEEEEEecC-CCee
Q psy5522 797 TPKELGYIGIKVTATSNLAGDSMEGKLLVKP-EGET 831 (1397)
Q Consensus 797 ~p~~lG~v~itV~A~~~~~~D~v~k~L~V~p-eG~~ 831 (1397)
..++.|.-+|++...++.+.......|.|+| .|.+
T Consensus 91 V~L~aG~NtI~i~~~~g~WG~~~iD~I~l~~a~~~~ 126 (140)
T 2bgo_A 91 KTLSAGNHSFGVRVGSSDWGYMNVHSLKLELLGGLT 126 (140)
T ss_dssp EEECSSCEEEEEECCSSSCCCCEEEEEEEEECC---
T ss_pred EEecCCccEEEEEecCCCceeEEEEEEEEEcCCCcc
Confidence 4566788888888877778888888887764 4444
No 138
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=25.25 E-value=1.7e+02 Score=28.98 Aligned_cols=62 Identities=16% Similarity=0.216 Sum_probs=40.9
Q ss_pred EEEcC-CCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 120 IVLNS-HLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 120 v~ld~-~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
-+||. ..+|+.+-.+.++-.+++|....-....+++.|-... +-.++....|.|+|+...++
T Consensus 35 HVLDt~~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~-ll~~~~~~~G~Y~L~F~tg~ 97 (147)
T 4ank_A 35 KVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHG-LTTEEEFVEGIYKVEIDTKS 97 (147)
T ss_dssp EEEETTTTEECCSCEEEEEEECTTSCEEEEEEEECCTTSEECC-SCCTTTCCSEEEEEEECHHH
T ss_pred EEEeCCCCcCCCCCEEEEEEECCCCCeEEEEEEEeCCCCCCCC-CCCccccCCceEEEEEEHHH
Confidence 34664 5688777777777677777543333457888888764 33345567899998876653
No 139
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=25.21 E-value=1.4e+02 Score=32.99 Aligned_cols=63 Identities=21% Similarity=0.205 Sum_probs=42.9
Q ss_pred CeEEEEEEEEccCCCccCCCCceEEEEEeeeccccccceeeEeeCCCeeEEEEEeCCCCCceeEEEEEEEecC
Q psy5522 328 LKYTAYMKLTHHDGTPVTDNNNMVQVRHGFSYDESKYEANQYKLDRNGMIKLVYYPPANENVTTLGIEAEYLD 400 (1397)
Q Consensus 328 ~p~~~~v~v~~~dG~P~~~~~~~V~v~~~~~~~~~~~~~~~~ttd~~G~~~f~i~~~~~~~~~~l~l~a~~~~ 400 (1397)
....++++|+| +|.|+++. .|......+ .......+||++|.+.+++.-. ..+. ..|.|...+
T Consensus 19 d~~t~tatV~D-~gnpv~g~--~V~fs~~~G----~l~~~~~~Td~~G~atvtltst-~aG~--~~VtA~v~~ 81 (282)
T 1f00_I 19 DAITYTVKVMK-GDKPVSNQ--EVTFTTTLG----KLSNSTEKTDTNGYAKVTLTST-TPGK--SLVSARVSD 81 (282)
T ss_dssp CCEEEEEEEEE-TTEECTTC--EEEEEESSS----EESCSEEECCTTSEEEEEEECS-SCEE--ECEEEEETT
T ss_pred ceEEEEEEEEE-CCcccCCc--EEEEEcCCC----ccccceeEECCCcEEEEEEEcC-CceE--EEEEEEECC
Confidence 45678888889 99999964 566554321 1123456899999999999854 3455 566666554
No 140
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=23.87 E-value=2.3e+02 Score=29.08 Aligned_cols=73 Identities=14% Similarity=0.025 Sum_probs=47.2
Q ss_pred CcccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeee-------c--cCCce-eeeeeecCCCCCCeeEEE
Q psy5522 107 AIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRA-------L--TTRGV-FSADLQLSKSPVLGDWNI 176 (1397)
Q Consensus 107 pIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~-------~--~~~Gi-~~~sf~L~~~~~lG~y~I 176 (1397)
.....||.|.+|+-..-. ++..+-.+-+.|.|..|..|...... . ...|- +...|.++-.-..|.|.|
T Consensus 64 ~~~~~Ge~v~l~i~~~~~--~~i~~~v~G~~Ik~~~G~~I~g~nT~~~~~~~~~~~~~~G~~~~v~f~f~l~L~~G~Y~l 141 (188)
T 2r5o_A 64 PSLTGNQQTDFLMKVVFE--YDFDCVVPGILIKTLDGLFLYGTNSFLASEGRENISVSRGDVRVFKFSLPVDLNSGDYLL 141 (188)
T ss_dssp SSEETTCEEEEEEEEEES--SCEEEEEEEEEEEETTCCEEEEEEHHHHTTTCCCEEECTTCEEEEEEEEECCBCSEEEEE
T ss_pred eEEeCCCEEEEEEEEEEC--CcCCccEEEEEEECCCCCEEEecCcccccccccccccCCCCEEEEEEEEecccCCCeEEE
Confidence 457799999999876432 22223456789999999999875421 1 12342 233444443466899999
Q ss_pred EEEEc
Q psy5522 177 TINVL 181 (1397)
Q Consensus 177 ~v~~~ 181 (1397)
.+...
T Consensus 142 sv~i~ 146 (188)
T 2r5o_A 142 SFGIS 146 (188)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99764
No 141
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=23.00 E-value=2e+02 Score=31.78 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=41.1
Q ss_pred CeEEEEEEEEEecCccccce-EEEEEEeccccCccccccccceeEEeecCceEEEEEechhhhccccccceEEEEEEEEE
Q psy5522 214 SKVVISVNAKYTYGKPVKGE-ATITAYPTIFSGVIQPLFQTPVRKVVPIDGKTVIEFDVVKELQLTDEYERNIHFDVAVE 292 (1397)
Q Consensus 214 ~~~~v~v~AkYtyGkPV~G~-v~v~v~~~~~~g~~~~~~~~~~~~~~d~~G~~~~~~~~~~~~~~~~~~~~~l~V~a~Vt 292 (1397)
+..++++..+= +|.||+|. |.+... .|- + ......+|.+|.+++.+.-.. .....|+|++.
T Consensus 19 d~~t~tatV~D-~gnpv~g~~V~fs~~----~G~----l-~~~~~~Td~~G~atvtltst~--------aG~~~VtA~v~ 80 (282)
T 1f00_I 19 DAITYTVKVMK-GDKPVSNQEVTFTTT----LGK----L-SNSTEKTDTNGYAKVTLTSTT--------PGKSLVSARVS 80 (282)
T ss_dssp CCEEEEEEEEE-TTEECTTCEEEEEES----SSE----E-SCSEEECCTTSEEEEEEECSS--------CEEECEEEEET
T ss_pred ceEEEEEEEEE-CCcccCCcEEEEEcC----CCc----c-ccceeEECCCcEEEEEEEcCC--------ceEEEEEEEEC
Confidence 56777777776 99999994 555431 111 1 122568999999999887533 34678888873
No 142
>3pay_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, cell adhesion; 2.50A {Bacteroides ovatus}
Probab=22.33 E-value=1.1e+02 Score=34.59 Aligned_cols=48 Identities=8% Similarity=0.166 Sum_probs=35.5
Q ss_pred cceEEEEECCCCCeEEeeeeeccC--CceeeeeeecCCCCCCeeEEEEEEEcC
Q psy5522 132 GALEIFITDGKGNRIKQWTRALTT--RGVFSADLQLSKSPVLGDWNITINVLD 182 (1397)
Q Consensus 132 ~~~~v~I~DP~g~~I~qw~~~~~~--~Gi~~~sf~L~~~~~lG~y~I~v~~~~ 182 (1397)
..++|+|.|.+|+.+.+....... .|- ..+|+.+-+.|.|++.+..+-
T Consensus 36 ~~v~lyvFD~~G~~v~~~~~~~~~L~~~~---~m~l~~~l~~G~Y~~VaWgg~ 85 (314)
T 3pay_A 36 KSVDVLVFDSDDKLLFTKSVKVAALVGGN---RMSLTDELDFGSYKVLTVGSL 85 (314)
T ss_dssp CEEEEEEECTTSBEEEEEEEEGGGSBTTT---EEECTTTCCSEEEEEEEEESC
T ss_pred CEEEEEEEcCCCCEEEEEecchhhccCCc---eEecCCcCCCCcEEEEEEeCC
Confidence 679999999999999876544322 222 667765455799999999863
No 143
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=22.15 E-value=4.9e+02 Score=24.33 Aligned_cols=62 Identities=8% Similarity=0.130 Sum_probs=42.4
Q ss_pred EEEEEEcCCCccEEEEEEEeecCCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeEEEEEEEe--c--eeeeEEEEE
Q psy5522 733 IPVVVFNYLSQDLVADVTLENVGQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGSTTTFVITP--K--ELGYIGIKV 808 (1397)
Q Consensus 733 l~~~VfNyl~~~~~v~v~L~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~p--~--~lG~v~itV 808 (1397)
-.+.|.|-.+++..+.+.+..-+++++.. ...+.|+|++...+.+.|.. . ..|..+|++
T Consensus 35 Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-----------------~~~i~v~~g~~~~~~v~v~~~~~~~~~~~~~i~f 97 (118)
T 2r39_A 35 YTLKVINKTQQVQEYNLDVKGLNDVSWYG-----------------KQTIQVEPGEVLNLPMSLGADPDKLNSAITTIQF 97 (118)
T ss_dssp EEEEEEECSSSCEEEEEEEESCSSCEEES-----------------CCEEEECTTCEEEEEEEEEECGGGCSSSEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEeCCcccEEeC-----------------CCcEEECCCCEEEEEEEEEEChHHccCCceeEEE
Confidence 45667899999999999998655665531 11489999998887777763 2 234555555
Q ss_pred EEE
Q psy5522 809 TAT 811 (1397)
Q Consensus 809 ~A~ 811 (1397)
..+
T Consensus 98 ~v~ 100 (118)
T 2r39_A 98 ILT 100 (118)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 144
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=21.66 E-value=1.6e+02 Score=33.13 Aligned_cols=27 Identities=19% Similarity=0.383 Sum_probs=22.6
Q ss_pred cCCCeEEEEEEEEccCCCccCCCCceEEE
Q psy5522 325 KPGLKYTAYMKLTHHDGTPVTDNNNMVQV 353 (1397)
Q Consensus 325 kpG~p~~~~v~v~~~dG~P~~~~~~~V~v 353 (1397)
.+|.|..+..+|+|.+|+|+++. .|.+
T Consensus 128 ~~G~~l~v~G~V~D~~G~Pv~gA--~Vei 154 (311)
T 2azq_A 128 DPGVVMFLQGQVFDANGKPLAGA--TVDL 154 (311)
T ss_dssp SCCCEEEEEEEEECSSSCBCTTC--EEEE
T ss_pred CCCcEEEEEEEEEcCCCCCCCCc--eeEE
Confidence 47999999999999999999953 4544
No 145
>2hb0_A CFA/I fimbrial subunit E; CFAE, adhesin, ETEC, traveler'S disease, cell adhesion; 2.30A {Escherichia coli}
Probab=21.66 E-value=1.8e+02 Score=32.84 Aligned_cols=27 Identities=15% Similarity=0.148 Sum_probs=23.6
Q ss_pred eEEEEEEEEEecCccccceEEEEEEec
Q psy5522 215 KVVISVNAKYTYGKPVKGEATITAYPT 241 (1397)
Q Consensus 215 ~~~v~v~AkYtyGkPV~G~v~v~v~~~ 241 (1397)
.-.|...-+++.|.-|.|+..+-+|.-
T Consensus 192 tPrVdLnLrp~~~~~vsG~~~lDMCLY 218 (369)
T 2hb0_A 192 NARVDLNLRPTGGGTYIGRNSVDMCFY 218 (369)
T ss_dssp CEEEECCCEEEETTEEEEEEEEEEEEE
T ss_pred CceecccccCCCCcccccccceeEEEe
Confidence 567888889999999999999999974
No 146
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.24 E-value=3e+02 Score=25.19 Aligned_cols=74 Identities=18% Similarity=0.184 Sum_probs=50.1
Q ss_pred eeeeCCEEEEEEEEEcCCCccEEEEEEEeec---CCeeeeecCCCccCCCCCCcceeeeEEEEEeCCCeeEEEEEEEece
Q psy5522 724 SVMRGEVVAIPVVVFNYLSQDLVADVTLENV---GQFDFADFSNEVDAAPQPKFEVFRRKKLTIKANSGSTTTFVITPKE 800 (1397)
Q Consensus 724 sv~rGE~~~l~~~VfNyl~~~~~v~v~L~~s---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~tv~f~v~p~~ 800 (1397)
.+..|+...-..++.|..+..+..++..... ..|.+.+ .+-.|++++...+.+...|..
T Consensus 21 ~v~~g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p------------------~~g~i~pg~~~~i~V~f~~~~ 82 (112)
T 2e6j_A 21 KVFTGSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSP------------------KEGIIEPSGVQAIQISFSSII 82 (112)
T ss_dssp EEESSCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEES------------------SEEEECTTBCCEEEEEECCCC
T ss_pred eEEECCEEEEEEEEEECCcceEEEEEecCCccccCcEEEEC------------------CcCEECCCCEEEEEEEEECCC
Confidence 3566888889999999888777766532111 1133321 134688999999999999999
Q ss_pred eeeEEEEEEEEeCCC
Q psy5522 801 LGYIGIKVTATSNLA 815 (1397)
Q Consensus 801 lG~v~itV~A~~~~~ 815 (1397)
.|..+-++.....+.
T Consensus 83 ~g~f~~~i~v~~~g~ 97 (112)
T 2e6j_A 83 LGNFEEEFLVNVNGS 97 (112)
T ss_dssp CEEEEEEECEEESSC
T ss_pred cceEEEEEEEEECCC
Confidence 998776665554443
No 147
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=21.15 E-value=5.1e+02 Score=24.63 Aligned_cols=56 Identities=13% Similarity=0.163 Sum_probs=36.1
Q ss_pred eEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeeeccCCceeeeeeecCCCCCCeeEEEEEEEc
Q psy5522 115 VRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRALTTRGVFSADLQLSKSPVLGDWNITINVL 181 (1397)
Q Consensus 115 V~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~ 181 (1397)
-.+++.-.|.+-+|+.+ ..+.|.|.+|+.|..|.. .|.+... . ...|.|.|+=...
T Consensus 28 ~~v~i~K~D~~g~~L~G--A~F~l~~~~g~~v~~~~s----dG~~~~~-~----L~~G~Y~l~EtkA 83 (121)
T 2x5p_A 28 THIKFSKRDIDGKELAG--ATMELRDSSGKTISTWIS----DGQVKDF-Y----LMPGKYTFVETAA 83 (121)
T ss_dssp EEEEEEEECTTCCBCCC--CEEEEECTTSCEEEEEEC----CSSCEEE-E----ECSEEEEEEEEEC
T ss_pred EEEEEEEECCCCCCcCC--CEEEEEECCCCEEEEEEe----CCEEEEc-c----cCCcEEEEEEEeC
Confidence 35566666766566533 456677999999999962 3655432 2 3469998865543
No 148
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=20.85 E-value=1.6e+02 Score=32.79 Aligned_cols=27 Identities=30% Similarity=0.388 Sum_probs=22.6
Q ss_pred cCCCeEEEEEEEEccCCCccCCCCceEEE
Q psy5522 325 KPGLKYTAYMKLTHHDGTPVTDNNNMVQV 353 (1397)
Q Consensus 325 kpG~p~~~~v~v~~~dG~P~~~~~~~V~v 353 (1397)
.+|.|..+..+|+|.+|+|+++. .|.+
T Consensus 129 ~~G~~l~v~G~V~D~~G~Pv~~A--~VEi 155 (293)
T 1tmx_A 129 AAGEPCWVEGTVTDTDGNPVPDA--RIEV 155 (293)
T ss_dssp CCSCEEEEEEEEEETTSCBCTTC--EEEE
T ss_pred CCCCEEEEEEEEECCCCCCCCCc--eeEE
Confidence 47999999999999999999953 4544
No 149
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=20.80 E-value=1.7e+02 Score=32.56 Aligned_cols=27 Identities=22% Similarity=0.439 Sum_probs=22.9
Q ss_pred cCCCeEEEEEEEEccCCCccCCCCceEEE
Q psy5522 325 KPGLKYTAYMKLTHHDGTPVTDNNNMVQV 353 (1397)
Q Consensus 325 kpG~p~~~~v~v~~~dG~P~~~~~~~V~v 353 (1397)
.+|.|..+..+|.|.+|+|+++. .|.+
T Consensus 125 ~~G~~l~l~G~V~D~~G~Pv~~A--~Vei 151 (290)
T 3n9t_A 125 TDGVPALVYGRVLDVQGRPVVGA--VLDV 151 (290)
T ss_dssp SCSCEEEEEEEEEETTSCBCSSC--EEEE
T ss_pred CCCCeEEEEEEEECCCCCCCCCC--EEEE
Confidence 68999999999999999999953 4444
No 150
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=20.59 E-value=1.1e+02 Score=35.61 Aligned_cols=37 Identities=22% Similarity=0.265 Sum_probs=27.7
Q ss_pred EEecccEEEEEcCCCcccCCceeEEEEEEEcCCCccC
Q psy5522 93 YVHKSYSVFIQLDKAIYKPGDLVRFRAIVLNSHLKPS 129 (1397)
Q Consensus 93 ~~~~~~~vfIqTDKpIYkPGqtV~fRvv~ld~~l~P~ 129 (1397)
+++....+-+..||..|-|||+|.+.+-.-+..-+++
T Consensus 189 ~ssGpl~l~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~V 225 (392)
T 1suj_A 189 LSDRPLHLEASLDKEIYYHGEPINVNVKINNTTGKIV 225 (392)
T ss_dssp ETTEEEEEEEEESCSEEETTCCEEEEEEEEECSSSEE
T ss_pred ecCCCEEEEEEeCCccccCCCEEEEEEEEECCCCCcE
Confidence 3333445667889999999999999888877665554
No 151
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=20.56 E-value=6.9e+02 Score=25.49 Aligned_cols=166 Identities=12% Similarity=0.089 Sum_probs=89.6
Q ss_pred EEEeeCe---eecCCeEEEEEEeecCCccE-EEEEEEEeecCCCCeeEEeEEEEECCCceeEEEEEcCCCCCceeEEEEE
Q psy5522 3 TVVAPKV---LRPNGEYHVAVSTQAVSEAT-QVSVEVGGKQDSGGEFRTKQLLSVDPFSTRIVKLDIGDLGPGQYNLTVK 78 (1397)
Q Consensus 3 ~v~~P~~---lr~g~~~~v~v~l~~~~~~v-~v~v~L~~~~~~~~~~~~~~~~~~~~~~~~~~~f~vP~~~~~~~~l~v~ 78 (1397)
.|+.|.. +..|..-+|.+... .+..+ .|.+.+ . |.. +-. . ... ...|.......|.|.|+++
T Consensus 3 ~ItsP~~g~~~~~g~~vtv~~~As-~d~~V~~Ve~~~--d---g~~--v~~-~---t~~--~ys~~~~~~~~G~htlta~ 68 (190)
T 3pdd_A 3 TIDSPVAGERFEAGKDINISATVK-SKTPVSKVEFYN--G---DTL--ISS-D---TTA--PYTAKITGAAVGAYNLKAV 68 (190)
T ss_dssp EEEESCTTCEEETTSCEEEEEEEC-CSSCEEEEEEEE--T---TEE--EEE-E---CSS--SEEEEECSCCSEEEEEEEE
T ss_pred EEecCCCCCEEcCCCeEEEEEEEe-CCCCEEEEEEEE--C---CEE--Ecc-c---cCC--ceEEEeccCCCccEEEEEE
Confidence 3556643 66677777777766 34333 333333 1 211 111 1 111 1244444456788888888
Q ss_pred ecC--c-eeeEeeEEEEEE-ecccEEEEE--cCCCcccCCceeEEEEEEEcCCCccCCCcceEEEEECCCCCeEEeeeee
Q psy5522 79 GSG--S-LNFYNSTGLVYV-HKSYSVFIQ--LDKAIYKPGDLVRFRAIVLNSHLKPSVTGALEIFITDGKGNRIKQWTRA 152 (1397)
Q Consensus 79 g~~--~-~~f~~~~~v~~~-~~~~~vfIq--TDKpIYkPGqtV~fRvv~ld~~l~P~~~~~~~v~I~DP~g~~I~qw~~~ 152 (1397)
..+ | ..-.....|.+. .....+-|. ++-..|..|.+|.+++-.-|.+- ..-.|++.. +|..+..
T Consensus 69 A~D~aGn~s~s~~v~vtV~~~~~Ptv~itsP~~g~~~~~~~~vtl~~~AsD~~g-----~V~~Ve~~~-dg~~v~t---- 138 (190)
T 3pdd_A 69 AVLSDGRRIESPVTPVLVKVIVKPTVKLTAPKSNVVAYGNEFLKITATASDSDG-----KISRVDFLV-DGEVIGS---- 138 (190)
T ss_dssp EEETTSCEEECCCEEEEEECCCCCEEEEEECCTTCCCBTTSEEEEEEEEECSSS-----CEEEEEEEE-TTEEEEE----
T ss_pred EEECCCCEeeecceeEEeccCCCCceeecCCCCCcEEecCCeEEEEEEEECCCC-----cEEEEEEEE-CCEEEec----
Confidence 753 2 222233566666 344443333 45567778888888887766432 123344432 3544443
Q ss_pred ccCCceeeeeeecCCCCCCeeEEEEEEEcC------eEEEEEEEEeeecCC
Q psy5522 153 LTTRGVFSADLQLSKSPVLGDWNITINVLD------QKFTKRFTVAEYVLP 197 (1397)
Q Consensus 153 ~~~~Gi~~~sf~L~~~~~lG~y~I~v~~~~------~~~~~~F~VeEYvLP 197 (1397)
...+-++..+.. ..|.|+|.+..-+ ....-.|.|.+=+|.
T Consensus 139 -~t~~~y~~~~~~----~~G~~tl~a~A~D~aGn~s~s~~vtvtv~~~~~~ 184 (190)
T 3pdd_A 139 -DREAPYEYEWKA----VEGNHEISVIAYDDDDAASTPDSVKIFVKQARLE 184 (190)
T ss_dssp -ECSSSEEEEEEC----CSEEEEEEEEEEETTCCBCCCEEEEEEEBCGGGC
T ss_pred -ccCCCEEEEEec----CCeeEEEEEEEEECCCCEEecceEEEEECCcccc
Confidence 223445666654 6799999999854 234557887766553
No 152
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=20.25 E-value=1.6e+02 Score=32.50 Aligned_cols=27 Identities=15% Similarity=0.144 Sum_probs=22.5
Q ss_pred cCC-CeEEEEEEEEccCCCccCCCCceEEE
Q psy5522 325 KPG-LKYTAYMKLTHHDGTPVTDNNNMVQV 353 (1397)
Q Consensus 325 kpG-~p~~~~v~v~~~dG~P~~~~~~~V~v 353 (1397)
.+| .|..+..+|.|.+|+|+++. .|.+
T Consensus 126 ~~G~~pl~l~G~V~D~~G~Pv~~A--~Vei 153 (280)
T 3hhy_A 126 DEKITPLVFSGQVTDLDGNGLAGA--KVEL 153 (280)
T ss_dssp GGGSCEEEEEEEEECTTSCBCSSC--EEEE
T ss_pred CCCceEEEEEEEEECCCCCCCCCc--EEEE
Confidence 478 99999999999999999953 4444
No 153
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=20.21 E-value=2.6e+02 Score=26.67 Aligned_cols=52 Identities=15% Similarity=0.217 Sum_probs=36.3
Q ss_pred ccEEEEEcCCCcccCCceeEEEEEEEcCC--CccC------------CCcceEEEEECCCCCeEEeee
Q psy5522 97 SYSVFIQLDKAIYKPGDLVRFRAIVLNSH--LKPS------------VTGALEIFITDGKGNRIKQWT 150 (1397)
Q Consensus 97 ~~~vfIqTDKpIYkPGqtV~fRvv~ld~~--l~P~------------~~~~~~v~I~DP~g~~I~qw~ 150 (1397)
...+|-+.++-+-+||++|.+.. .+.. -.|. .+..+...|.||+|+.++...
T Consensus 46 ~~~~y~Fp~~~~L~pg~~vtIws--~~~g~~~~pp~dlv~~~~~sWg~g~~~~t~L~n~~GeevA~~~ 111 (121)
T 1ifr_A 46 PLLTYRFPPKFTLKAGQVVTIWA--AGAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRK 111 (121)
T ss_dssp CCEEEECCSSCEECTTCEEEEEE--TTSSCCCBTTTEEEETTCSCCCCSSCEEEEEECTTSCEEEEEE
T ss_pred ccEEEEeCCCcEECCCCEEEEEe--CCCCCCCCCchhEEEecccccCCCCCeEEEEECCCCCEEEEEe
Confidence 45789999999999999987554 3221 1121 244567889999999988643
No 154
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=20.18 E-value=4.3e+02 Score=32.18 Aligned_cols=41 Identities=12% Similarity=0.175 Sum_probs=25.9
Q ss_pred eeeeeeecCCCCCCeeEEEEEEEcC--eEEEEEEEEeeecCCc
Q psy5522 158 VFSADLQLSKSPVLGDWNITINVLD--QKFTKRFTVAEYVLPK 198 (1397)
Q Consensus 158 i~~~sf~L~~~~~lG~y~I~v~~~~--~~~~~~F~VeEYvLPk 198 (1397)
-+..++.+|..+..|.|.+.+.... ...+..|.|....+|+
T Consensus 418 t~~~~vt~~~~~~~g~y~l~~~~~~~~~~~s~~~~~~~~~~~~ 460 (601)
T 1w8o_A 418 KGQVTITVPAGTTPGRYRVGATLRTSAGNASTTFTVTVGLLDQ 460 (601)
T ss_dssp EEEEEEECCTTCCCEEEEEEEEEEETTEEEEEEEEEEESBCCG
T ss_pred EEEEEEecCCCCCCCcEEeeEEEEecCceeEEEEEeecccCCc
Confidence 3445777787777889888776542 3344566666555554
Done!