RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5522
(1397 letters)
>d1c3da_ a.102.4.4 (A:) C3D, a C3 fragment and ligand for complement
receptor 2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 294
Score = 145 bits (366), Expect = 5e-39
Identities = 55/152 (36%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 882 NLANLIKMPFGCGEQNMLNFVPNIVVLEYLKKTYQLTD---AIEAKASRYLETGYQQELT 938
L +LI P G GEQNM+ P ++ + YL +T Q A ++ GY Q+L
Sbjct: 6 RLKHLIVTPSGAGEQNMIGMTPTVIAVHYLDETEQWEKFGLEKRQGALELIKKGYTQQLA 65
Query: 939 YRRPDGSFSAFGTTDPNGSTWLTAFVAKSFRQAASHTTIDESVILEALAWLSSN-QAVNG 997
+R+P +F+AF P+ TWLTA+V K F A + ID V+ A+ WL Q +G
Sbjct: 66 FRQPSSAFAAFVKRAPS--TWLTAYVVKVFSLAVNLIAIDSQVLCGAVKWLILEKQKPDG 123
Query: 998 SFPEVGKVSHADMQG----GAAKGLALTAYTL 1025
F E V H +M G K +ALTA+ L
Sbjct: 124 VFQEDAPVIHQEMIGGLRNNNEKDMALTAFVL 155
Score = 82.6 bits (203), Expect = 1e-17
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 1157 MNTINKAVDYIVKNLAGTEDAYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWK 1216
+I KA D++ N + +Y +AI YAL LL K W+
Sbjct: 173 PGSITKAGDFLEANYMNLQRSYTVAIAGYALAQMGRLKGP----LLNKFLTTAKDKNRWE 228
Query: 1217 RAERPEDKKNPWAQVPNSVDVEMTSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFAST 1276
P Q +VE TSYALL+ L + P++ WL Q+ GG+ ST
Sbjct: 229 D---------PGKQ---LYNVEATSYALLALLQLKDFDFVPPVVRWLNEQRYYGGGYGST 276
Query: 1277 Q 1277
Q
Sbjct: 277 Q 277
Score = 28.7 bits (63), Expect = 5.5
Identities = 5/18 (27%), Positives = 9/18 (50%)
Query: 1336 SKDTVIGLYALAQLAEKV 1353
++ T + ALAQ +
Sbjct: 276 TQATFMVFQALAQYQKDA 293
>d1hzfa_ a.102.4.4 (A:) C4adg fragment of complement factor C4a {Human
(Homo sapiens) [TaxId: 9606]}
Length = 326
Score = 138 bits (347), Expect = 4e-36
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 879 SIPNLANLIKMPFGCGEQNMLNFVPNIVVLEYLKKTYQ---LTDAIEAKASRYLETGYQQ 935
S +A+L+++P GCGEQ M+ P + YL KT Q L + A ++ GY +
Sbjct: 1 SPGGVASLLRLPRGCGEQTMIYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKGYMR 60
Query: 936 ELTYRRPDGSFSAFGTTDPNGSTWLTAFVAKSFRQAASHTTIDESVILEALAWLSSNQAV 995
+R+ DGS++A+ + D + TWLTAFV K A + E WL S Q
Sbjct: 61 IQQFRKADGSYAAWLSRDSS--TWLTAFVLKVLSLAQEQVGGSPEKLQETSNWLLSQQQA 118
Query: 996 NGSFPEVGKVSHADMQGGA---AKGLALTAYTLL 1026
+GSF + V MQGG + +ALTA+ +
Sbjct: 119 DGSFQDPCPVLDRSMQGGLVGNDETVALTAFVTI 152
Score = 93.1 bits (230), Expect = 7e-21
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 1158 NTINKAVDYIVKNL-AGTEDAYAIAICSYALHLAQHP--VKDVAFNLLESKAHNEDGKKW 1214
+I+KA ++ + AG A+A AI +YAL L + P ++ VA N L + A +
Sbjct: 175 ASISKASSFLGEKASAGLLGAHAAAITAYALTLTKAPADLRGVAHNNLMAMAQETGDNLY 234
Query: 1215 WKRAERPEDKKNPWAQVPN----------SVDVEMTSYALLSYLDR-GLVEDTLPILTWL 1263
W + P ++ +E T+YALL L G E WL
Sbjct: 235 WGSVTGSQSNAVSPTPAPRNPSDPMPQAPALWIETTAYALLHLLLHEGKAEMADQASAWL 294
Query: 1264 VTQQNDQGGFASTQ 1277
Q + QGGF STQ
Sbjct: 295 TRQGSFQGGFRSTQ 308
>d3es6b1 b.1.18.23 (B:1-118) Prolactin-inducible protein, PIP {Human
(Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 75.4 bits (185), Expect = 1e-16
Identities = 15/120 (12%), Positives = 27/120 (22%), Gaps = 17/120 (14%)
Query: 710 RVFRPFFISLDLPYSVMRGEVVAIPVVVFNYLSQDLVADVTLENVGQFDFADFSNEVDAA 769
+ + D+P SV + V + V L + +V L + A
Sbjct: 3 NTRKIIIKNFDIPKSVRPNDEVTAVLAVQTELKECMVVKTYLISSIPLQGAFNYK----- 57
Query: 770 PQPKFEVFRRKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNLAGDSMEGKLLVKPEG 829
+ + + TF + I V P
Sbjct: 58 ----------YTACLCDD--NPKTFYWDFYTNRTVQIAAVVDVIRELGICPDDAAVIPIK 105
>d1edya_ b.2.4.1 (A:) alpha-1-macroglobulin {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 134
Score = 72.6 bits (178), Expect = 1e-15
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 1063 TLDPQVDKNSDSNHLQLSICSGFIGE-GDSNMAVMEVSLPSGFTVDSDALPSLQVSQNVK 1121
TL DK Q+ I +IGE +SNM +++V + SGF ++ LQ N++
Sbjct: 10 TLPLNFDKAEHHRKFQIHINVSYIGERPNSNMVIVDVKMVSGFIPVKPSVKKLQDQSNIQ 69
Query: 1122 RVETKNGNTMVVLYF 1136
R E + V++Y
Sbjct: 70 RTEVNTNH--VLIYI 82
Score = 58.4 bits (141), Expect = 2e-10
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 1277 QMSKKELCPTVSAFRTHKVAQQKPVPVSIYDYYDQSRRARMFY 1319
+++ + + + + + V KP PV +YDYY+ A Y
Sbjct: 84 KLTNQTMGFSFAVEQDIPVKNLKPAPVKVYDYYETDEFAIEEY 126
>d1ayoa_ b.2.4.1 (A:) alpha-2-macroglobulin {Cow (Bos taurus) [TaxId:
9913]}
Length = 130
Score = 69.5 bits (170), Expect = 2e-14
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 1063 TLDPQVDKNSDSNHLQLSICSGFIGEGD-SNMAVMEVSLPSGFTVDSDALPSLQVSQNVK 1121
TL D Q+S+ +IG SNMA+++V + SGF + L+ NV
Sbjct: 10 TLPQTCDGPKAHTSFQISLSVSYIGSRPASNMAIVDVKMVSGFIPLKPTVKMLE-RSNVS 68
Query: 1122 RVETKNGNTMVVLYF 1136
R E N + V++Y
Sbjct: 69 RTEVSNNH--VLIYL 81
Score = 58.3 bits (141), Expect = 1e-10
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 1277 QMSKKELCPTVSAFRTHKVAQQKPVPVSIYDYYDQSRRARMFY 1319
+++ + L T + + V KP V +YDYY+ A Y
Sbjct: 83 KVTNETLTLTFTVLQDIPVRDLKPAIVKVYDYYETDEFAVAEY 125
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 448
Score = 42.4 bits (99), Expect = 3e-04
Identities = 51/407 (12%), Positives = 105/407 (25%), Gaps = 91/407 (22%)
Query: 906 VVLEYLKKTYQLTDAIEAKASRYLETGYQQELTYRRPDGSFSAFGTTDPNGST-WLTAFV 964
L K Y A G + + DG ++ NGS W TAF
Sbjct: 49 YALGLDTKNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGQGTNGSQIWDTAFA 108
Query: 965 AKSFRQA-ASHTTIDESVILEALAWLSSNQAVNGSFPEVGKVSHADMQGGA--------- 1014
++ +A H S + +A +L +Q + G +
Sbjct: 109 IQALLEAGGHHRPEFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWI 168
Query: 1015 -----AKGLA--LTAYTLLPKKTRAVNMTATGSGFAVVYISYQYNINVTGAWPMFTLDPQ 1067
A+ L L P T + AV+ ++ + N G + +
Sbjct: 169 VSDCTAEALKAVLLLQEKCPHVTEHIPRERLCDAVAVL-LNMR---NPDGGFATY----- 219
Query: 1068 VDKNSDSNHLQLSICSGFIGEGDSNMAVMEVSLPSGFTVDSDALPSLQVSQNVKRVETKN 1127
+ + L+L S G+ + +E +
Sbjct: 220 -ETKRGGHLLELLNPSEVFGDIMIDYTYVECT---------------------------- 250
Query: 1128 GNTMVVLYFAYHQVLPWTLMHYLVSKYPRMNTINKAVDYIVKN---------LAGTEDAY 1178
+ V+ Y + T+ + +++ + G Y
Sbjct: 251 --SAVMQALKYFHKRFPEHRAAEI-----RETLTQGLEFCRRQQRADGSWEGSWGVCFTY 303
Query: 1179 AIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNP---------WA 1229
A +D S+A + + + + +
Sbjct: 304 GTWFGLEAFACMGQTYRDGTACAEVSRACD-----FLLSRQMADGGWGEDFESCEERRYV 358
Query: 1230 QVPNSVDVEMTSYALLSYLDRGLVEDTLPI---LTWLVTQQNDQGGF 1273
Q S + T +A++ + + + L+ +Q G +
Sbjct: 359 QSAQS-QIHNTCWAMMGLMAVRHPDIE-AQERGVRCLLEKQLPNGDW 403
>d2sqca1 a.102.4.2 (A:8-36,A:308-630) Squalene-hopene cyclase
{Alicyclobacillus acidocaldarius [TaxId: 405212]}
Length = 352
Score = 36.3 bits (83), Expect = 0.021
Identities = 22/107 (20%), Positives = 34/107 (31%), Gaps = 11/107 (10%)
Query: 1173 GTEDAYAIAICSYALHLAQHPVKDVAFNLLESKAH---NEDGKKWWKRAERPEDKKNPWA 1229
G Y AL ++ N DG W + ED +A
Sbjct: 212 GVNYLYGTGAVVSALKAVGIDTREPYIQKALDWVEQHQNPDGG-WGEDCRSYEDP--AYA 268
Query: 1230 QVPNSVDVEMTSYALLSYLDRGLVEDTLPI---LTWLVTQQNDQGGF 1273
S T++AL++ + G E + +LV Q GG+
Sbjct: 269 GKGAS-TPSQTAWALMALIAGGRAESE-AARRGVQYLVETQRPDGGW 313
Score = 31.7 bits (71), Expect = 0.57
Identities = 29/158 (18%), Positives = 48/158 (30%), Gaps = 28/158 (17%)
Query: 1159 TINKAVDYIVKNLAGTEDAYAI----------AICSYALHLA----QHPVKDVAFNLLES 1204
T+++AV+Y++ ++ Y + AL A H A L
Sbjct: 7 TLDRAVEYLLSCQK--DEGYWWGPLISPVWDTGLAVLALRAAGLPADHDRLVKAGEWLLD 64
Query: 1205 KAHNEDGKKWWKRAERPEDKKNPWA-----QVPNSVDVEMTSYALLSYL---DRGLVEDT 1256
+ G W +RP K +A V L+ L D D
Sbjct: 65 RQITVPG--DWAV-KRPNLKPGGFAFQFDNVYYPDVCDTAVVVWALNTLRLPDERRRRDA 121
Query: 1257 LP-ILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTH 1293
+ W+V Q+ GG+ + + P F
Sbjct: 122 MTKGFRWIVGMQSSNGGWGAYDVDNTSDLPNHIPFSDF 159
>d3dssb1 a.102.4.3 (B:7-331) Rab geranylgeranyltransferase, beta
subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 325
Score = 33.0 bits (75), Expect = 0.24
Identities = 12/112 (10%), Positives = 28/112 (25%), Gaps = 17/112 (15%)
Query: 1177 AYAIAICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWAQVPNSVD 1236
++ L + A + S + + G +E
Sbjct: 140 SFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSES---------------H 184
Query: 1237 VEMTSYAL--LSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPT 1286
L+ + ++ + WL +Q GG ++C +
Sbjct: 185 AGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYS 236
Score = 31.9 bits (72), Expect = 0.58
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 1240 TSYALLSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPTVSA 1289
T L+ L R E+ IL ++ + Q++ GG +++ L T+SA
Sbjct: 49 TVMDLMGQLHRMNKEE---ILVFIKSCQHECGGVSASIGHDPHLLYTLSA 95
Score = 31.5 bits (71), Expect = 0.76
Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 16/120 (13%)
Query: 1181 AICSYALHLAQHPVKDVAFNLLESKAHNEDGKKWWKRAERPEDKKNPWAQVPNSVDVEMT 1240
A+ L+ + H + EDG + W ++ D +
Sbjct: 95 AVQILTLYDSIHVINVDKVVAYVQSLQKEDGSFAG----------DIWGEI----DTRFS 140
Query: 1241 SYAL--LSYLDRGLVEDTLPILTWLVTQQNDQGGFASTQMSKKELCPTVSAFRTHKVAQQ 1298
A+ L+ L + + + ++++ N GGF S+ + Q
Sbjct: 141 FCAVATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQ 200
>d1fvia2 d.142.2.1 (A:2-189) ATP-dependent DNA ligase, N-terminal
domain {Chlorella virus PBCV-1 [TaxId: 10506]}
Length = 188
Score = 31.8 bits (71), Expect = 0.35
Identities = 21/149 (14%), Positives = 41/149 (27%), Gaps = 10/149 (6%)
Query: 634 LDGEEQLLSQVTTSVTQLTVRKHFPETWLFQMEETGFDGKVMVNEKVPDSITSWVLSAFS 693
+ G + S T +R L ++ G DG++ + TS V++
Sbjct: 27 IAGIRSVKQTQMLSRTFKPIRNSVMNRLLTELLPEGSDGEISIEGATFQDTTSAVMTGHK 86
Query: 694 VDSLYGLGLMDMPKKLRVFRPFFISLDLPYSVMRGEVVAIPVVVFNYLSQDLVADVTLEN 753
+ + F Y ++ V + L V + L
Sbjct: 87 MY--------NAKFSYYWFDYVTDDPLKKYIDRVEDMKNYITVHPHILEHAQVKIIPLIP 138
Query: 754 VGQFDFADFSNEVDAAPQPKFE--VFRRK 780
V + + FE + R+
Sbjct: 139 VEINNITELLQYERDVLSKGFEGVMIRKP 167
>d2guja1 b.106.1.3 (A:5-143) Phage-like element PBSX protein XkdM
{Bacillus subtilis [TaxId: 1423]}
Length = 139
Score = 30.8 bits (70), Expect = 0.48
Identities = 13/59 (22%), Positives = 18/59 (30%), Gaps = 9/59 (15%)
Query: 65 IGDLGPGQYNLTVKGSGSLNFYNSTGLVYVHKSYSVFIQLDKAIYKPGDLVRFRAIVLN 123
+G G G+G+ FY K S F+ L K G F +
Sbjct: 39 MGRRMTGHKTTGANGTGTATFY---------KVTSKFVLLMMDYVKKGSDPYFTLQAVL 88
>d2sqca2 a.102.4.2 (A:37-307) Squalene-hopene cyclase
{Alicyclobacillus acidocaldarius [TaxId: 405212]}
Length = 271
Score = 29.2 bits (65), Expect = 2.9
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 1236 DVEMTSYA--LLSYLDRGLVEDTLPILTWLVTQQNDQGGFA 1274
+V M + L LDR + I +L+ +Q + G +A
Sbjct: 3 NVTMEAEYVLLCHILDRVDRDRMEKIRRYLLHEQREDGTWA 43
>d1h80a_ b.80.1.8 (A:) iota-carrageenase {Alteromonas sp., atcc
43554 [TaxId: 232]}
Length = 464
Score = 28.8 bits (64), Expect = 5.2
Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 12/95 (12%)
Query: 779 RKKLTIKANSGSTTTFVITPKELGYIGIKVTATSNLAGDSMEGKLLVKPEGETQYKNKAI 838
+ I A S + Y + + SN+ +E +++KP KN +
Sbjct: 41 ALQRAINAISRKPNGGTLLIPNGTYHFLGIQMKSNVHIR-VESDVIIKPTWNGDGKNHRL 99
Query: 839 FVDLRKNKT-----------FSVNVTLDMPKNIVP 862
F N F V+ KN+
Sbjct: 100 FEVGVNNIVRNFSFQGLGNGFLVDFKDSRDKNLAV 134
>d2bj7a2 d.58.18.4 (A:51-132) Nickel responsive regulator NikR,
C-terminal domain {Archaeon Pyrococcus horikoshii
[TaxId: 53953]}
Length = 82
Score = 26.5 bits (59), Expect = 5.5
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 134 LEIFITDGKGNRIKQWTRAL-TTRGVFSADLQLS 166
LE+ + G+ +IK L + +GV L ++
Sbjct: 48 LEVIVVKGEAKKIKMIADKLLSLKGVKHGKLVMT 81
>d1ayia_ a.28.2.1 (A:) ImmE7 protein (Im7) {Escherichia coli [TaxId:
562]}
Length = 86
Score = 26.6 bits (59), Expect = 5.6
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Query: 379 LVYYPPANENVTTLGIEAEYLDIKEW 404
L+YYP N + + GI E IKEW
Sbjct: 53 LIYYPSDNRDDSPEGIVKE---IKEW 75
>d2vlqa1 a.28.2.1 (A:4-84) ImmE9 protein (Im9) {Escherichia coli
[TaxId: 562]}
Length = 81
Score = 26.6 bits (59), Expect = 6.0
Identities = 8/26 (30%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
Query: 379 LVYYPPANENVTTLGIEAEYLDIKEW 404
L+YYP ++ + GI +K+W
Sbjct: 49 LIYYPKEGDDDSPSGIVNT---VKQW 71
>d1xoca1 c.94.1.1 (A:17-520) Oligo-peptide binding protein (OPPA)
{Bacillus subtilis [TaxId: 1423]}
Length = 504
Score = 28.5 bits (62), Expect = 7.2
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 312 KYKMDLIKSSEYFKPGLKYTAYMK--LTHHDGTPVT 345
K+ L +S + GL Y +K + HDG +T
Sbjct: 48 NVKLSLAESIKELDGGLAYDVKIKKGVKFHDGKELT 83
>d1q5ya_ d.58.18.4 (A:) Nickel responsive regulator NikR, C-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 84
Score = 26.1 bits (58), Expect = 7.9
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 134 LEIFITDGKGNRIKQWTRAL-TTRGVFSADLQL 165
LEI + G ++ + + RGV LQ
Sbjct: 47 LEIAVLKGDMGDVQHFADDVIAQRGVRHGHLQC 79
>d1uqwa_ c.94.1.1 (A:) Hypothetical protein YliB {Escherichia coli
[TaxId: 562]}
Length = 487
Score = 28.2 bits (61), Expect = 8.4
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 312 KYKMDLIKSSEYFKPGLKYTAYMK--LTHHDGTPVT 345
K K L +S G+ YT ++ + DGT
Sbjct: 45 KLKNVLAESYTVSDDGITYTVKLREGIKFQDGTDFN 80
>d1jc9a_ d.171.1.1 (A:) Tachylectin 5a {Japanese horseshoe crab
(Tachypleus tridentatus) [TaxId: 6853]}
Length = 220
Score = 27.5 bits (60), Expect = 8.7
Identities = 15/92 (16%), Positives = 29/92 (31%)
Query: 276 QLTDEYERNIHFDVAVEEALTGRRQNNTGSVVFHKHKYKMDLIKSSEYFKPGLKYTAYMK 335
LT++ I FD+ +E T + + Y + + S
Sbjct: 88 ALTNQRNYMIRFDLKDKENDTRYAIYQDFWIENEDYLYCLHIGNYSGDAGNSFGRHNGHN 147
Query: 336 LTHHDGTPVTDNNNMVQVRHGFSYDESKYEAN 367
+ D T + Q G + + +E+N
Sbjct: 148 FSTIDKDHDTHETHCAQTYKGGWWYDRCHESN 179
>d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 551
Score = 28.0 bits (62), Expect = 9.7
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 1346 LAQLAEKVLARNNDVSISFKYLNGQSSEMSVN 1377
LA + +++ RN + I ++YL E SV
Sbjct: 519 LAIMDKEIEVRNEKLDIPYEYLRPSIVENSVA 550
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.133 0.383
Gapped
Lambda K H
0.267 0.0581 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 5,029,830
Number of extensions: 238504
Number of successful extensions: 543
Number of sequences better than 10.0: 1
Number of HSP's gapped: 533
Number of HSP's successfully gapped: 31
Length of query: 1397
Length of database: 2,407,596
Length adjustment: 97
Effective length of query: 1300
Effective length of database: 1,075,786
Effective search space: 1398521800
Effective search space used: 1398521800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (26.8 bits)