BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5526
(88 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y2L9|LRCH1_HUMAN Leucine-rich repeat and calponin homology domain-containing protein
1 OS=Homo sapiens GN=LRCH1 PE=1 SV=3
Length = 728
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 63/69 (91%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
+SL E+LG AL DGVVLCHL NH+RPRSVASIHVPSPAVPKL+MA+CRRNV+NFLEACRK
Sbjct: 596 VSLHEDLGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRK 655
Query: 61 IGVEEGDLC 69
+GV E DLC
Sbjct: 656 LGVPEADLC 664
>sp|Q96II8|LRCH3_HUMAN Leucine-rich repeat and calponin homology domain-containing protein
3 OS=Homo sapiens GN=LRCH3 PE=1 SV=2
Length = 777
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/69 (82%), Positives = 63/69 (91%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
+SLP +LG AL+DGVVLCHLANHVRPRSV SIHVPSPAVPKLTMA+CRRNV+NFLEACRK
Sbjct: 672 VSLPCDLGAALTDGVVLCHLANHVRPRSVPSIHVPSPAVPKLTMAKCRRNVENFLEACRK 731
Query: 61 IGVEEGDLC 69
IGV + LC
Sbjct: 732 IGVPQEQLC 740
>sp|P62046|LRCH1_MOUSE Leucine-rich repeat and calponin homology domain-containing protein
1 OS=Mus musculus GN=Lrch1 PE=1 SV=2
Length = 709
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 63/69 (91%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
++L E+LG AL DGVVLCHLANHVRPRSVASIHVPSPAVPKL+MA+CRRNV+NFLEACRK
Sbjct: 609 VTLHEDLGAALMDGVVLCHLANHVRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRK 668
Query: 61 IGVEEGDLC 69
+GV E LC
Sbjct: 669 LGVPEEKLC 677
>sp|Q8BVU0|LRCH3_MOUSE Leucine-rich repeat and calponin homology domain-containing protein
3 OS=Mus musculus GN=Lrch3 PE=2 SV=3
Length = 778
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 63/69 (91%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
+SLP +LG AL+DGVVLCHLANHVRPRSV SIHVPSPAVPKLTMA+CRRNV+NFL+ACRK
Sbjct: 665 VSLPCDLGAALTDGVVLCHLANHVRPRSVPSIHVPSPAVPKLTMAKCRRNVENFLDACRK 724
Query: 61 IGVEEGDLC 69
IGV + LC
Sbjct: 725 IGVPQEQLC 733
>sp|P41737|LRCH1_FELCA Leucine-rich repeat and calponin homology domain-containing protein
1 (Fragment) OS=Felis catus PE=2 SV=2
Length = 251
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/69 (79%), Positives = 62/69 (89%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
+SL E+LG AL DGVVLCHL NH+RPRSVASIHVPSPAVPKL+MA+CRRNV+NFLEACRK
Sbjct: 151 VSLHEDLGAALMDGVVLCHLVNHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLEACRK 210
Query: 61 IGVEEGDLC 69
+GV E LC
Sbjct: 211 LGVPEEKLC 219
>sp|Q3UMG5|LRCH2_MOUSE Leucine-rich repeat and calponin homology domain-containing protein
2 OS=Mus musculus GN=Lrch2 PE=2 SV=2
Length = 773
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 62/67 (92%)
Query: 3 LPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIG 62
LP+++G AL DGVVLCHLANH+RPRSVASIHVPSPAVPKL+MA+CRRNV+NFL+AC+K+G
Sbjct: 672 LPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLDACKKLG 731
Query: 63 VEEGDLC 69
V + LC
Sbjct: 732 VSQERLC 738
>sp|Q5VUJ6|LRCH2_HUMAN Leucine-rich repeat and calponin homology domain-containing protein
2 OS=Homo sapiens GN=LRCH2 PE=2 SV=2
Length = 765
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 62/67 (92%)
Query: 3 LPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIG 62
LP+++G AL DGVVLCHLANH+RPRSVASIHVPSPAVPKL+MA+CRRNV+NFL+AC+K+G
Sbjct: 664 LPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLDACKKLG 723
Query: 63 VEEGDLC 69
V + LC
Sbjct: 724 VSQERLC 730
>sp|Q921G6|LRCH4_MOUSE Leucine-rich repeat and calponin homology domain-containing protein
4 OS=Mus musculus GN=Lrch4 PE=2 SV=1
Length = 680
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 62/83 (74%)
Query: 3 LPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIG 62
LPE+L AL++GV+LC LAN +RPRSV IHVPSPAVPKL+ + R+NV++FLEACRK+G
Sbjct: 553 LPEDLAEALANGVLLCQLANQLRPRSVPFIHVPSPAVPKLSALKSRKNVESFLEACRKMG 612
Query: 63 VEEGDLCDRDSIVDATQGSLSTL 85
V E DLC ++ T L T+
Sbjct: 613 VPEADLCSPSDLLRGTAQGLQTV 635
>sp|O75427|LRCH4_HUMAN Leucine-rich repeat and calponin homology domain-containing protein
4 OS=Homo sapiens GN=LRCH4 PE=1 SV=2
Length = 683
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 60/82 (73%)
Query: 3 LPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIG 62
LPE+L AL+ GV+LC LAN +RPRSV IHVPSPAVPKL+ + R+NV++FLEACRK+G
Sbjct: 556 LPEDLAEALASGVILCQLANQLRPRSVPFIHVPSPAVPKLSALKARKNVESFLEACRKMG 615
Query: 63 VEEGDLCDRDSIVDATQGSLST 84
V E DLC ++ T L T
Sbjct: 616 VPEADLCSPSDLLQGTARGLRT 637
>sp|P26932|CNN1_CHICK Calponin-1 OS=Gallus gallus GN=CNN1 PE=1 SV=2
Length = 292
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
L DGV+LC L N ++P SV ++ P KL N+ NFL A + GV+ D+
Sbjct: 53 GLKDGVILCELINKLQPGSVQKVNDPVQNWHKL------ENIGNFLRAIKHYGVKPHDIF 106
Query: 70 DRDSIVDAT 78
+ + + + T
Sbjct: 107 EANDLFENT 115
>sp|P37803|CNN1_MELGA Calponin-1 (Fragment) OS=Meleagris gallopavo GN=CNN1 PE=1 SV=1
Length = 176
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
L DGV+L L N ++P SV ++ P KL N+ NFL A + GV+ D+
Sbjct: 47 GLKDGVILMELINKLQPGSVQKVNDPVQNWHKL------ENIGNFLRAIKHYGVKPHDIF 100
Query: 70 DRDSIVDAT 78
+ + + + T
Sbjct: 101 EANDLFENT 109
>sp|Q32L92|CNN3_BOVIN Calponin-3 OS=Bos taurus GN=CNN3 PE=2 SV=1
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
MS+ L DG++LC L N ++P SV ++ S P+L N+ NF++A +
Sbjct: 42 MSIGANFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQL------ENIGNFIKAIQA 95
Query: 61 IGVEEGDLCDRDSIVDATQGSLSTLSNT 88
G++ D+ + + + + G+++ + T
Sbjct: 96 YGMKPHDIFEANDLFE--NGNMTQVQTT 121
>sp|Q15417|CNN3_HUMAN Calponin-3 OS=Homo sapiens GN=CNN3 PE=1 SV=1
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
MS+ L DG++LC L N ++P SV ++ S P+L N+ NF++A +
Sbjct: 42 MSIGPNFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQL------ENIGNFIKAIQA 95
Query: 61 IGVEEGDLCDRDSIVDATQGSLSTLSNT 88
G++ D+ + + + + G+++ + T
Sbjct: 96 YGMKPHDIFEANDLFE--NGNMTQVQTT 121
>sp|Q9R0C8|VAV3_MOUSE Guanine nucleotide exchange factor VAV3 OS=Mus musculus GN=Vav3
PE=1 SV=2
Length = 847
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 6 ELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEA-CRKIGVE 64
+L L DGV+LC L N++RP S+ + P+++ C +N+ FL A C G+
Sbjct: 32 DLAQTLRDGVLLCQLLNNLRPHSINLKEI--NLRPQMSQFLCLKNIRTFLAACCDTFGMR 89
Query: 65 EGDLCDRDSIVDATQ-----GSLSTLSNT 88
+ +L + + D +LS LS T
Sbjct: 90 KSELFEAFDLFDVRDFGKVIETLSRLSRT 118
>sp|Q15052|ARHG6_HUMAN Rho guanine nucleotide exchange factor 6 OS=Homo sapiens GN=ARHGEF6
PE=1 SV=2
Length = 776
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 4 PEE-LGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIG 62
PEE L +L +GVVLC L N + P SV + T A C N+++FL+ C +
Sbjct: 27 PEEFLKSSLKNGVVLCKLINRLMPGSVEKF-----CLDPQTEADCINNINDFLKGCATLQ 81
Query: 63 VEEGDLCDRDSIVDATQGSLSTL 85
VE D D S V+ ++ LSTL
Sbjct: 82 VEIFDPDDLYSGVNFSK-VLSTL 103
>sp|P37397|CNN3_RAT Calponin-3 OS=Rattus norvegicus GN=Cnn3 PE=1 SV=1
Length = 330
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
L DG++LC L N ++P SV ++ S P+L N+ NF++A + G++ D+
Sbjct: 51 GLKDGIILCELINKLQPGSVKKVNESSLNWPQL------ENIGNFIKAIQAYGMKPHDIF 104
Query: 70 DRDSIVDATQGSLSTLSNT 88
+ + + + G+++ + T
Sbjct: 105 EANDLFE--NGNMTQVQTT 121
>sp|Q9DAW9|CNN3_MOUSE Calponin-3 OS=Mus musculus GN=Cnn3 PE=2 SV=1
Length = 330
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
L DG++LC L N ++P SV ++ S P+L N+ NF++A + G++ D+
Sbjct: 51 GLKDGIILCELINKLQPGSVKKVNESSLNWPQL------ENIGNFIKAIQAYGMKPHDIF 104
Query: 70 DRDSIVDATQGSLSTLSNT 88
+ + + + G+++ + T
Sbjct: 105 EANDLFE--NGNMTQVQTT 121
>sp|P52735|VAV2_HUMAN Guanine nucleotide exchange factor VAV2 OS=Homo sapiens GN=VAV2
PE=1 SV=2
Length = 878
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 6 ELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACR-KIGVE 64
+L AL DGV+LC L +++ P S+ + P+++ C +N+ FL+ C K G+
Sbjct: 32 DLAQALRDGVLLCQLLHNLSPGSIDLKDINFR--PQMSQFLCLKNIRTFLKVCHDKFGLR 89
Query: 65 EGDLCDRDSIVD 76
+L D + D
Sbjct: 90 NSELFDPFDLFD 101
>sp|Q60992|VAV2_MOUSE Guanine nucleotide exchange factor VAV2 OS=Mus musculus GN=Vav2
PE=1 SV=1
Length = 868
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 6 ELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACR-KIGVE 64
+L AL DGV+LC L +++ P S+ + P+++ C +N+ FL+ C K G+
Sbjct: 32 DLAQALRDGVLLCQLLHNLSPGSIDLKDINFR--PQMSQFLCLKNIRTFLKVCHDKFGLR 89
Query: 65 EGDLCDRDSIVD 76
+L D + D
Sbjct: 90 NSELFDPFDLFD 101
>sp|Q9UKW4|VAV3_HUMAN Guanine nucleotide exchange factor VAV3 OS=Homo sapiens GN=VAV3
PE=1 SV=1
Length = 847
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 6 ELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEA-CRKIGVE 64
+L L DGV+LC L N++R S+ + P+++ C +N+ FL A C G+
Sbjct: 32 DLAQTLRDGVLLCQLLNNLRAHSINLKEI--NLRPQMSQFLCLKNIRTFLTACCETFGMR 89
Query: 65 EGDLCDRDSIVDATQ-----GSLSTLSNT 88
+ +L + + D +LS LS T
Sbjct: 90 KSELFEAFDLFDVRDFGKVIETLSRLSRT 118
>sp|Q9NHV9|VAV_DROME Protein vav OS=Drosophila melanogaster GN=vav PE=2 SV=2
Length = 793
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 7 LGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACR-KIGVEE 65
L L DGV+LC+L H+ P S+ P++ C +N+ FL+ C G+ +
Sbjct: 50 LAMTLRDGVLLCNLVIHLDPSSLDPREFNRK--PQMAQFLCSKNIKLFLDVCHNNFGIRD 107
Query: 66 GDLCDRDSIVDAT 78
DL + + D T
Sbjct: 108 ADLFEPTMLYDLT 120
>sp|Q8WWI1|LMO7_HUMAN LIM domain only protein 7 OS=Homo sapiens GN=LMO7 PE=1 SV=3
Length = 1683
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 12/76 (15%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEE---- 65
+L +GV+LC L N ++P + I+ S + L N++ FL+AC +IG++E
Sbjct: 90 SLENGVLLCDLINKLKPGVIKKINRLSTPIAGLD------NINVFLKACEQIGLKEAQLF 143
Query: 66 --GDLCDRDSIVDATQ 79
GDL D + V Q
Sbjct: 144 HPGDLQDLSNRVTVKQ 159
>sp|Q8K4I3|ARHG6_MOUSE Rho guanine nucleotide exchange factor 6 OS=Mus musculus
GN=Arhgef6 PE=1 SV=1
Length = 771
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 4 PEE-LGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIG 62
PEE L +L +GVVLC L N + P SV + T A C N+++FL+ C +
Sbjct: 27 PEEFLKSSLKNGVVLCKLINRLLPGSVEKY-----CLEPQTEADCIDNINDFLKGCATLQ 81
Query: 63 VE 64
VE
Sbjct: 82 VE 83
>sp|P51911|CNN1_HUMAN Calponin-1 OS=Homo sapiens GN=CNN1 PE=1 SV=2
Length = 297
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
L DG++LC N ++P SV I+ + +L N+ NF++A K GV+ D+
Sbjct: 53 GLKDGIILCEFINKLQPGSVKKINESTQNWHQL------ENIGNFIKAITKYGVKPHDIF 106
Query: 70 DRDSIVDAT 78
+ + + + T
Sbjct: 107 EANDLFENT 115
>sp|Q55E26|GXCB_DICDI Rac guanine nucleotide exchange factor B OS=Dictyostelium
discoideum GN=gxcB PE=2 SV=1
Length = 1198
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
+L DG++LC + N + P ++ I+ + + K+ N+ N+L+ C +G+++ DL
Sbjct: 367 SLKDGILLCRVINTIIPNTILYINNGNSSFKKM------ENIGNYLKGCLVVGLKKTDLF 420
Query: 70 D 70
D
Sbjct: 421 D 421
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 11 LSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDL 68
+GV+LC L N +R ++ I+ + + +L N++N+L+AC+ +G++ +L
Sbjct: 154 FKNGVLLCRLINKLRGGTIKRINESTISFKQL------ENIENYLKACKTLGLQSVNL 205
>sp|Q7YRL2|CNN1_SHEEP Calponin-1 OS=Ovis aries GN=CNN1 PE=2 SV=1
Length = 297
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
L DG++LC N ++P SV ++ + +L N+ NF++A K GV+ D+
Sbjct: 53 GLKDGIILCEFINKLQPGSVKKVNESTQNWHQL------ENIGNFIKAITKYGVKPHDIF 106
Query: 70 DRDSIVDAT 78
+ + + + T
Sbjct: 107 EANDLFENT 115
>sp|Q08290|CNN1_RAT Calponin-1 OS=Rattus norvegicus GN=Cnn1 PE=2 SV=1
Length = 297
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
L DG++LC N ++P SV ++ + +L N+ NF++A K GV+ D+
Sbjct: 53 GLKDGIILCEFINKLQPGSVKKVNESTQNWHQL------ENIGNFIKAITKYGVKPHDIF 106
Query: 70 DRDSIVDAT 78
+ + + + T
Sbjct: 107 EANDLFENT 115
>sp|Q08092|CNN1_PIG Calponin-1 OS=Sus scrofa GN=CNN1 PE=2 SV=1
Length = 297
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
L DG++LC N ++P SV ++ + +L N+ NF++A K GV+ D+
Sbjct: 53 GLKDGIILCEFINKLQPGSVKKVNESTQNWHQL------ENIGNFIKAITKYGVKPHDIF 106
Query: 70 DRDSIVDAT 78
+ + + + T
Sbjct: 107 EANDLFENT 115
>sp|Q9GK38|CNN1_MUSPF Calponin-1 OS=Mustela putorius furo GN=CNN1 PE=2 SV=1
Length = 297
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
L DG++LC N ++P SV ++ + +L N+ NF++A K GV+ D+
Sbjct: 53 GLKDGIILCEFINKLQPGSVKKVNESTQNWHQL------ENIGNFIKAITKYGVKPHDIF 106
Query: 70 DRDSIVDAT 78
+ + + + T
Sbjct: 107 EANDLFENT 115
>sp|Q08091|CNN1_MOUSE Calponin-1 OS=Mus musculus GN=Cnn1 PE=2 SV=1
Length = 297
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
L DG++LC N ++P SV ++ + +L N+ NF++A K GV+ D+
Sbjct: 53 GLKDGIILCEFINKLQPGSVKKVNESTQNWHQL------ENIGNFIKAITKYGVKPHDIF 106
Query: 70 DRDSIVDAT 78
+ + + + T
Sbjct: 107 EANDLFENT 115
>sp|Q2HJ38|CNN1_BOVIN Calponin-1 OS=Bos taurus GN=CNN1 PE=2 SV=1
Length = 297
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDLC 69
L DG++LC N ++P SV ++ + +L N+ NF++A K GV+ D+
Sbjct: 53 GLKDGIILCEFINKLQPGSVKKVNESTQNWHQL------ENIGNFIKAITKYGVKPHDIF 106
Query: 70 DRDSIVDAT 78
+ + + + T
Sbjct: 107 EANDLFENT 115
>sp|Q9UPQ0|LIMC1_HUMAN LIM and calponin homology domains-containing protein 1 OS=Homo
sapiens GN=LIMCH1 PE=1 SV=4
Length = 1083
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 14/73 (19%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIH-VPSPAVPKLTMARCRRNVDN---FLEACRKIGVEE 65
L +G++LC L N ++P V I+ +P+P +DN FL C+++G++E
Sbjct: 47 GLENGILLCELLNAIKPGLVKKINRLPTPIA----------GLDNIILFLRGCKELGLKE 96
Query: 66 GDLCDRDSIVDAT 78
L D + D +
Sbjct: 97 SQLFDPSDLQDTS 109
>sp|Q54TK8|GEFP_DICDI Ras guanine nucleotide exchange factor P OS=Dictyostelium
discoideum GN=gefP PE=2 SV=1
Length = 1502
Score = 36.2 bits (82), Expect = 0.060, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEE 65
+L +GV LC + N ++P ++ I++ S ++ R N+ NF + C IG+ E
Sbjct: 109 SLKNGVALCKIINLIKPNTIKKINLNS------SIFSYRENLTNFTKGCESIGMTE 158
>sp|Q5XXR3|ARHG6_RAT Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus
GN=Arhgef6 PE=1 SV=1
Length = 772
Score = 35.8 bits (81), Expect = 0.072, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 4 PEE-LGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIG 62
PEE L +L +GVVLC L + + P SV + P T A C N+++FL+ C +
Sbjct: 27 PEEFLKSSLKNGVVLCKLISRLLPGSVEK-YCQEPQ----TEADCIDNINDFLKGCATLQ 81
Query: 63 VE 64
VE
Sbjct: 82 VE 83
>sp|Q3KQW7|LIMC1_XENLA LIM and calponin homology domains-containing protein 1 OS=Xenopus
laevis GN=limch1 PE=2 SV=1
Length = 1083
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIH-VPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDL 68
L +G++LC L N ++P V I+ +P+P N+ FL C+++G++E L
Sbjct: 47 GLENGILLCELLNAIKPGLVKKINRLPTPIA-------GLDNITLFLRGCKELGLKESQL 99
Query: 69 CDRDSIVDA 77
D + D
Sbjct: 100 FDPGDLQDT 108
>sp|Q24799|MYPH_ECHGR Myophilin OS=Echinococcus granulosus PE=2 SV=1
Length = 190
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 11 LSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRKIGVEEGDL 68
L DG VLC L N ++P + I+ + +P + N+ FLEA + GV DL
Sbjct: 52 LKDGTVLCKLMNSIKPGCIKKIN-ENATMP----FKIMENISAFLEAMKGYGVPVADL 104
>sp|Q5XFX0|TAGL2_RAT Transgelin-2 OS=Rattus norvegicus GN=Tagln2 PE=1 SV=1
Length = 199
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 5 EELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMA-RCRRNVDNFLEACRKIGV 63
E L DG VLC L N + P A P + TMA + + FL+A + G+
Sbjct: 50 ENFQNWLKDGTVLCELINSLYPEGQA----PVKKIQASTMAFKQMEQISQFLQAAERYGI 105
Query: 64 EEGDLCDRDSIVDATQGS 81
D+ VD +G
Sbjct: 106 NTTDIF---QTVDLWEGK 120
>sp|Q08093|CNN2_MOUSE Calponin-2 OS=Mus musculus GN=Cnn2 PE=2 SV=1
Length = 305
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
+S+ + L DGV+LC L N ++P SV I+ +L N+ NF++A
Sbjct: 44 LSIGPDFQKGLKDGVILCTLMNKLQPGSVPKINRSMQNWHQL------ENLSNFIKAMVS 97
Query: 61 IGVEEGDLCDRDSIVDA---TQGSLSTLS 86
G+ DL + + + ++ TQ +S L+
Sbjct: 98 YGMNPVDLFEANDLFESGNMTQVQVSLLA 126
>sp|Q5E9F5|TAGL2_BOVIN Transgelin-2 OS=Bos taurus GN=TAGLN2 PE=2 SV=3
Length = 199
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 5 EELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMA-RCRRNVDNFLEACRKIGV 63
E L DG VLC L N + P A P + TMA + + FL+A + G+
Sbjct: 50 ENFQNWLKDGTVLCELINGLYPEGQA----PVKKIQASTMAFKQMEQISQFLQAAERYGI 105
Query: 64 EEGDLCDRDSIVDATQGS 81
D+ VD +G
Sbjct: 106 NTTDIF---QTVDLWEGK 120
>sp|Q3UWW6|GA2L3_MOUSE GAS2-like protein 3 OS=Mus musculus GN=Gas2l3 PE=2 SV=1
Length = 683
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 5 EELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRR-----------NVDN 53
E L L +GV+LC L N ++ V H P + C++ N N
Sbjct: 71 ERLLEELDNGVLLCQLINVLQ-NMVKGCHSDEPGNFPMRKVPCKKDAASGSFFARDNTAN 129
Query: 54 FLEACRKIGVEEGDLCDRDSIV 75
FL CR IGV+E L + + +V
Sbjct: 130 FLHWCRHIGVDETYLFESEGLV 151
>sp|P37802|TAGL2_HUMAN Transgelin-2 OS=Homo sapiens GN=TAGLN2 PE=1 SV=3
Length = 199
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 5 EELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMA-RCRRNVDNFLEACRKIGV 63
E L DG VLC L N + P A P + TMA + + FL+A + G+
Sbjct: 50 ENFQNWLKDGTVLCELINALYPEGQA----PVKKIQASTMAFKQMEQISQFLQAAERYGI 105
Query: 64 EEGDLCDRDSIVDATQGS 81
D+ VD +G
Sbjct: 106 NTTDIF---QTVDLWEGK 120
>sp|Q9WVA4|TAGL2_MOUSE Transgelin-2 OS=Mus musculus GN=Tagln2 PE=1 SV=4
Length = 199
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 5 EELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMA-RCRRNVDNFLEACRKIGV 63
E L DG VLC L N + P A P + +MA + + FL+A + G+
Sbjct: 50 ENFQKWLKDGTVLCKLINSLYPEGQA----PVKKIQASSMAFKQMEQISQFLQAAERYGI 105
Query: 64 EEGDLCDRDSIVDATQGS 81
D+ VD +G
Sbjct: 106 NTTDIF---QTVDLWEGK 120
>sp|Q08094|CNN2_PIG Calponin-2 (Fragment) OS=Sus scrofa GN=CNN2 PE=2 SV=1
Length = 296
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
+S+ + L DG++LC L N ++P SV I+ +L N+ NF++A
Sbjct: 44 LSIGPDFQKGLKDGIILCTLMNKLQPGSVPKINRSMQNWHQL------ENLSNFIKAMVS 97
Query: 61 IGVEEGDLCDRDSIVDA---TQGSLSTLS 86
G+ DL + + + ++ TQ +S L+
Sbjct: 98 YGMNPVDLFEANDLFESGNMTQVQVSLLA 126
>sp|Q3SYU6|CNN2_BOVIN Calponin-2 OS=Bos taurus GN=CNN2 PE=2 SV=3
Length = 309
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
+S+ + L DG++LC L N ++P SV I+ +L N+ NF++A
Sbjct: 44 LSVGPDFQKGLKDGIILCTLMNKLQPGSVPKINRSMQNWHQL------ENLSNFIKAMVS 97
Query: 61 IGVEEGDLCDRDSIVDA---TQGSLSTLS 86
G+ DL + + + ++ TQ +S L+
Sbjct: 98 YGMNPVDLFEANDLFESGNLTQVQVSLLA 126
>sp|Q3UH68|LIMC1_MOUSE LIM and calponin homology domains-containing protein 1 OS=Mus
musculus GN=Limch1 PE=1 SV=2
Length = 1057
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 14/73 (19%)
Query: 10 ALSDGVVLCHLANHVRPRSVASIH-VPSPAVPKLTMARCRRNVDN---FLEACRKIGVEE 65
L +G++LC L N ++P V I+ +P+P +DN FL C+++G++E
Sbjct: 47 GLENGILLCELLNAIKPGLVKKINRLPTPIA----------GLDNTILFLRGCKELGLKE 96
Query: 66 GDLCDRDSIVDAT 78
L D + D +
Sbjct: 97 SQLFDPSDLQDTS 109
>sp|Q45FX5|VAV_CAEEL Protein vav-1 OS=Caenorhabditis elegans GN=vav-1 PE=1 SV=1
Length = 1007
Score = 33.1 bits (74), Expect = 0.54, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 6 ELGPALSDGVVLCHLANHVRP-----RSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
E L DG++LC LAN + P + + + PSP + C N++ F C+
Sbjct: 63 EFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFL-------CCNNINYFAMFCKT 115
Query: 61 -IGVEEGDLCDRDSI--VDATQGSLSTLS 86
+E+ DL + + ++ Q L TLS
Sbjct: 116 YFNLEDADLFTAEDLYYMNGFQKVLKTLS 144
>sp|Q5RFN6|CNN2_PONAB Calponin-2 OS=Pongo abelii GN=CNN2 PE=2 SV=3
Length = 309
Score = 33.1 bits (74), Expect = 0.57, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
+S+ + L DG +LC L N ++P SV I+ +L N+ NF++A
Sbjct: 44 LSIGPDFQKGLKDGTILCTLMNKLQPGSVPKINRSMQNWHQL------ENLSNFIKAMVS 97
Query: 61 IGVEEGDLCDRDSIVDA---TQGSLSTLS 86
G+ DL + + + ++ TQ +S L+
Sbjct: 98 YGMNPVDLFEANDLFESGNMTQVQVSLLA 126
>sp|Q99439|CNN2_HUMAN Calponin-2 OS=Homo sapiens GN=CNN2 PE=1 SV=4
Length = 309
Score = 33.1 bits (74), Expect = 0.57, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 1 MSLPEELGPALSDGVVLCHLANHVRPRSVASIHVPSPAVPKLTMARCRRNVDNFLEACRK 60
+S+ + L DG +LC L N ++P SV I+ +L N+ NF++A
Sbjct: 44 LSIGPDFQKGLKDGTILCTLMNKLQPGSVPKINRSMQNWHQL------ENLSNFIKAMVS 97
Query: 61 IGVEEGDLCDRDSIVDA---TQGSLSTLS 86
G+ DL + + + ++ TQ +S L+
Sbjct: 98 YGMNPVDLFEANDLFESGNMTQVQVSLLA 126
>sp|Q08873|SCP1_YEAST Transgelin OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCP1 PE=1 SV=1
Length = 200
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
Query: 4 PEELGPALSDGVVLCHLANHVRPRSVAS---IHVPSPAVPKLTMARCRRNVDNFLEACRK 60
P +L L DG VLC LAN + I S +P + M + + FL RK
Sbjct: 47 PGDLLECLKDGTVLCKLANILYEADTGEANHISWKSSKMPFVQMDQ----ISQFLSFSRK 102
Query: 61 IGVEEGDLCD-------RD-SIVDATQGSLSTLSN 87
GV E +L +D +IV T SLS +N
Sbjct: 103 YGVPEDELFQTIDLFEKKDPAIVFQTLKSLSRYAN 137
>sp|O81635|ATK4_ARATH Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2
Length = 987
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 5 EELGPALSDGVVLCHLANHVRPRSVASIHVPSP----AVPKLTMARCRRNVDNFLEACRK 60
EE L G+VLC++ N V P SV+ + V +P L+ + N+ NFL A +
Sbjct: 73 EEFRLGLRSGIVLCNVLNKVNPGSVSKV-VEAPDDVADGAALSAFQYFENIRNFLVAIEE 131
Query: 61 IGVEEGDLCD 70
+G+ + D
Sbjct: 132 MGLPSFEASD 141
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,343,814
Number of Sequences: 539616
Number of extensions: 1120225
Number of successful extensions: 2682
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 2633
Number of HSP's gapped (non-prelim): 70
length of query: 88
length of database: 191,569,459
effective HSP length: 58
effective length of query: 30
effective length of database: 160,271,731
effective search space: 4808151930
effective search space used: 4808151930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)