RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy5527
         (269 letters)



>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 321

 Score = 26.7 bits (59), Expect = 3.0
 Identities = 15/95 (15%), Positives = 33/95 (34%), Gaps = 3/95 (3%)

Query: 33  EVLQDIYNKLCFEDRTTRPFRRAIGFTQVVKKDLLPLLISTKDDSTTFDLCIKILMNLTI 92
           ++L  +   +  E+   + F +      +    +  ++  T   +    +   IL  +  
Sbjct: 189 QILFTLLQNVAQEEAAAQSFYQTYFCDILQ--HIFSVVTDTSHTAG-LTMHASILAYMFN 245

Query: 93  PVECLLPIDSLCKTDEGRNTIYELNWLLTSCKEAF 127
            VE      SL   +   N I+   ++    K AF
Sbjct: 246 LVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAF 280


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0629    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 971,456
Number of extensions: 42753
Number of successful extensions: 100
Number of sequences better than 10.0: 1
Number of HSP's gapped: 100
Number of HSP's successfully gapped: 6
Length of query: 269
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 185
Effective length of database: 1,254,276
Effective search space: 232041060
Effective search space used: 232041060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.0 bits)