Your job contains 1 sequence.
>psy5532
MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELISNTNQEELRTISTYYFDGQG
KAVRPMVSVLMGRAINYHLNRKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNH
KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRKK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5532
(168 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0051005 - symbol:qless "qless" species:7227 "Droso... 320 9.1e-29 1
UNIPROTKB|E1BZW8 - symbol:PDSS1 "Uncharacterized protein"... 249 3.0e-21 1
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 243 1.4e-20 1
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 245 1.9e-20 1
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 237 1.5e-19 1
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 236 2.1e-19 1
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 232 5.4e-19 1
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 232 5.9e-19 1
CGD|CAL0005672 - symbol:orf19.7478 species:5476 "Candida ... 134 7.4e-14 2
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 180 1.5e-13 1
POMBASE|SPBPJ4664.01 - symbol:dps1 "decaprenyl diphosphat... 124 1.4e-12 2
DICTYBASE|DDB_G0280293 - symbol:coq1 "trans-prenyltransfe... 172 2.9e-12 1
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 169 3.2e-12 1
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 169 3.2e-12 1
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 165 7.5e-12 1
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 164 1.0e-11 1
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 153 1.9e-10 1
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 150 3.3e-10 1
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 148 5.6e-10 1
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 148 6.0e-10 1
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 147 7.7e-10 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 147 7.7e-10 1
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 145 1.2e-09 1
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 144 1.6e-09 1
WB|WBGene00000761 - symbol:coq-1 species:6239 "Caenorhabd... 139 1.9e-09 2
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 133 2.6e-08 1
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 133 2.6e-08 1
SGD|S000000207 - symbol:COQ1 "Hexaprenyl pyrophosphate sy... 133 5.2e-08 1
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 126 1.5e-07 1
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 125 1.9e-07 1
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 126 2.4e-07 1
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 125 3.0e-07 1
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 122 7.9e-07 1
TIGR_CMR|NSE_0238 - symbol:NSE_0238 "polyprenyl synthetas... 122 8.1e-07 1
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 115 3.4e-06 2
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 120 4.2e-06 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 119 4.4e-06 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 119 4.4e-06 1
UNIPROTKB|Q83C74 - symbol:CBU_1255 "Dimethylallyltransfer... 118 5.9e-06 1
TIGR_CMR|CBU_1255 - symbol:CBU_1255 "geranyltranstransfer... 118 5.9e-06 1
ASPGD|ASPL0000038406 - symbol:AN10340 species:162425 "Eme... 105 8.2e-06 2
TAIR|locus:2062315 - symbol:GPS1 "geranyl diphosphate syn... 119 8.5e-06 1
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 117 1.1e-05 1
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 116 2.4e-05 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 115 2.5e-05 1
TIGR_CMR|ECH_0455 - symbol:ECH_0455 "putative geranyltran... 113 3.7e-05 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 108 7.7e-05 2
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 112 9.3e-05 1
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 111 0.00012 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 111 0.00013 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 111 0.00014 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 111 0.00015 1
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 109 0.00028 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 106 0.00048 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 106 0.00048 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 105 0.00062 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 105 0.00062 1
UNIPROTKB|Q97W92 - symbol:gdS-2 "Hexaprenyl pyrophosphate... 104 0.00080 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 105 0.00080 1
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 105 0.00095 1
>FB|FBgn0051005 [details] [associations]
symbol:qless "qless" species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 EMBL:AE014297 GO:GO:0043066 GO:GO:0033554
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0014019
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 OMA:KPSVNAL
FlyBase:FBgn0051005 EMBL:BT044087 RefSeq:NP_733425.1
UniGene:Dm.5492 SMR:Q9V9Z3 IntAct:Q9V9Z3 MINT:MINT-1009288
STRING:Q9V9Z3 EnsemblMetazoa:FBtr0085769 GeneID:43697
KEGG:dme:Dmel_CG31005 UCSC:CG31005-RA CTD:43697 InParanoid:Q9V9Z3
GenomeRNAi:43697 NextBio:835306 Uniprot:Q9V9Z3
Length = 436
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 62/100 (62%), Positives = 82/100 (82%)
Query: 33 YNHKKELI-SNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLN---------RK 82
Y+ + L+ S T+Q EL TI++YYFDGQGKA+RPMV++LM +AINYHLN ++
Sbjct: 125 YDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQR 184
Query: 83 QVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKK 122
Q+A+F+EM+H+ASL+HDDVIDQSDFRRGKPSVN ++NHKK
Sbjct: 185 QIALFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKK 224
Score = 170 (64.9 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 29/37 (78%), Positives = 36/37 (97%)
Query: 1 MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKK 37
+F+EM+H+ASL+HDDVIDQSDFRRGKPSVN ++NHKK
Sbjct: 188 LFSEMVHSASLVHDDVIDQSDFRRGKPSVNALWNHKK 224
Score = 161 (61.7 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 31/51 (60%), Positives = 42/51 (82%)
Query: 118 YNHKKELI-SNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRK 167
Y+ + L+ S T+Q EL TI++YYFDGQGKA+RPMV++LM +AINYHLN +
Sbjct: 125 YDDVRYLLKSGTSQPELDTIASYYFDGQGKALRPMVTMLMAKAINYHLNNE 175
>UNIPROTKB|E1BZW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:AADN02000555 IPI:IPI00572129
ProteinModelPortal:E1BZW8 Ensembl:ENSGALT00000012224
NextBio:20823389 Uniprot:E1BZW8
Length = 366
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/133 (42%), Positives = 83/133 (62%)
Query: 3 AEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGK 61
A M + + D+ Q F+ G+ + +Y KKEL+ +T ELR + YYFDG+GK
Sbjct: 29 ALMCSCSKTVSDEKY-QDPFQLGRKDLKNLYEDIKKELLVST--AELREMCEYYFDGKGK 85
Query: 62 AVRPMVSVLMGRAINYH--------LNRKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPS 113
A RPM+ VLM RA N H +++ VA+ AEMIHTASL+HDDVID ++ RRGK +
Sbjct: 86 AFRPMIVVLMARACNIHHSNSREVQASQRSVAIIAEMIHTASLVHDDVIDDANSRRGKMT 145
Query: 114 VNVVYNHKKELIS 126
VN ++ +K +++
Sbjct: 146 VNQIWGERKAVLA 158
Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 88 AEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGK 146
A M + + D+ Q F+ G+ + +Y KKEL+ +T ELR + YYFDG+GK
Sbjct: 29 ALMCSCSKTVSDEKY-QDPFQLGRKDLKNLYEDIKKELLVST--AELREMCEYYFDGKGK 85
Query: 147 AVRPMVSVLMGRAINYH 163
A RPM+ VLM RA N H
Sbjct: 86 AFRPMIVVLMARACNIH 102
Score = 124 (48.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 22/41 (53%), Positives = 33/41 (80%)
Query: 1 MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
+ AEMIHTASL+HDDVID ++ RRGK +VN ++ +K +++
Sbjct: 118 IIAEMIHTASLVHDDVIDDANSRRGKMTVNQIWGERKAVLA 158
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 243 (90.6 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 52/114 (45%), Positives = 76/114 (66%)
Query: 22 FRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYH-- 78
F+ G +N +Y +KEL+ +T EL+ +S YYFDG+GKA RP++ VLM RA N H
Sbjct: 46 FKLGWRDLNGLYEDIRKELLISTT--ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHS 103
Query: 79 ------LNRKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 126
+++ +A+ AEMIHTASL+HDDVID + RRGK +VN ++ KK +++
Sbjct: 104 NSRDVQASQRSIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLA 157
Score = 129 (50.5 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 107 FRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYH 163
F+ G +N +Y +KEL+ +T EL+ +S YYFDG+GKA RP++ VLM RA N H
Sbjct: 46 FKLGWRDLNGLYEDIRKELLISTT--ELKEMSEYYFDGKGKAFRPIIVVLMARACNIH 101
Score = 127 (49.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 1 MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
+ AEMIHTASL+HDDVID + RRGK +VN ++ KK +++
Sbjct: 117 LIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLA 157
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 245 (91.3 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 51/124 (41%), Positives = 79/124 (63%)
Query: 12 IHDDVIDQSDFRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVL 70
+H D + F + + +Y+ K++L+ ++ EL+ + YYFDG+GKA RPM+ +L
Sbjct: 82 LHSDAKLKDPFSLVQKDLQNIYDDIKQQLL--VSKAELKALCDYYFDGKGKAFRPMIVIL 139
Query: 71 MGRAINYHLNR--------KQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKK 122
M RA N H N+ + +AM +EMIHTASL+HDDVID SD RRGK ++N V+ +K
Sbjct: 140 MARACNVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDVIDDSDKRRGKNTINNVWGERK 199
Query: 123 ELIS 126
+++
Sbjct: 200 AILA 203
Score = 132 (51.5 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/41 (58%), Positives = 33/41 (80%)
Query: 1 MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
M +EMIHTASL+HDDVID SD RRGK ++N V+ +K +++
Sbjct: 163 MISEMIHTASLVHDDVIDDSDKRRGKNTINNVWGERKAILA 203
Score = 128 (50.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 97 IHDDVIDQSDFRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVL 155
+H D + F + + +Y+ K++L+ ++ EL+ + YYFDG+GKA RPM+ +L
Sbjct: 82 LHSDAKLKDPFSLVQKDLQNIYDDIKQQLL--VSKAELKALCDYYFDGKGKAFRPMIVIL 139
Query: 156 MGRAINYHLNRK 167
M RA N H N++
Sbjct: 140 MARACNVHSNKE 151
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 237 (88.5 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 52/114 (45%), Positives = 74/114 (64%)
Query: 22 FRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLN 80
F+ G + +Y +KEL +T EL+ +S YYFDG+GKA RP++ VLM RA N H N
Sbjct: 91 FKLGWRDLKGLYEDIRKELFISTT--ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHN 148
Query: 81 --------RKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 126
++ +A+ AEMIHTASL+HDDVID + RRGK +VN ++ KK +++
Sbjct: 149 NSRDMQASQRTIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLA 202
Score = 127 (49.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 1 MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
+ AEMIHTASL+HDDVID + RRGK +VN ++ KK +++
Sbjct: 162 LIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLA 202
Score = 126 (49.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 107 FRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLN 165
F+ G + +Y +KEL +T EL+ +S YYFDG+GKA RP++ VLM RA N H N
Sbjct: 91 FKLGWRDLKGLYEDIRKELFISTT--ELKEMSEYYFDGKGKAFRPIIVVLMARACNIHHN 148
Query: 166 RKK 168
+
Sbjct: 149 NSR 151
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 236 (88.1 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 51/114 (44%), Positives = 75/114 (65%)
Query: 22 FRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLN 80
F+ G + +Y +KEL+ +T+ EL+ +S YYFDG+GKA RP++ LM RA N H N
Sbjct: 96 FKLGWRDLKGLYEDIRKELLISTS--ELKEMSEYYFDGKGKAFRPIIVALMARACNIHHN 153
Query: 81 --------RKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 126
++ +A+ AEMIHTASL+HDDVID + RRGK +VN ++ KK +++
Sbjct: 154 NSRHVQASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLA 207
Score = 127 (49.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 1 MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
+ AEMIHTASL+HDDVID + RRGK +VN ++ KK +++
Sbjct: 167 LIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKAVLA 207
Score = 126 (49.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 84 VAMFAEMIHTA--SLIHDDVIDQSDFRRGKPSVNVVYNH-KKELISNTNQEELRTISTYY 140
V + HT S H F+ G + +Y +KEL+ +T+ EL+ +S YY
Sbjct: 71 VCRISRFHHTTPDSKTHSGEKYTDPFKLGWRDLKGLYEDIRKELLISTS--ELKEMSEYY 128
Query: 141 FDGQGKAVRPMVSVLMGRAINYHLNRKK 168
FDG+GKA RP++ LM RA N H N +
Sbjct: 129 FDGKGKAFRPIIVALMARACNIHHNNSR 156
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 232 (86.7 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 53/117 (45%), Positives = 76/117 (64%)
Query: 20 SD-FRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINY 77
SD F+ G + +Y +KEL +T EL+ +S YYFDG+GKA RP++ VLM RA N
Sbjct: 87 SDPFKLGWRDLKGLYEDIRKELHISTR--ELKDMSEYYFDGKGKAFRPIIVVLMARACNI 144
Query: 78 HLN--------RKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 126
H N ++ +A+ AEMIHTA+L+HDDVID + RRGK +VN ++ KK +++
Sbjct: 145 HHNNAREMQASQRSIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLA 201
Score = 123 (48.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 1 MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
+ AEMIHTA+L+HDDVID + RRGK +VN ++ KK +++
Sbjct: 161 LVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLA 201
Score = 123 (48.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 105 SD-FRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINY 162
SD F+ G + +Y +KEL +T EL+ +S YYFDG+GKA RP++ VLM RA N
Sbjct: 87 SDPFKLGWRDLKGLYEDIRKELHISTR--ELKDMSEYYFDGKGKAFRPIIVVLMARACNI 144
Query: 163 HLNRKK 168
H N +
Sbjct: 145 HHNNAR 150
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 232 (86.7 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 51/114 (44%), Positives = 74/114 (64%)
Query: 22 FRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLN 80
F+ G + +Y +KEL +T ELR +S Y+FDG+GKA RP++ VLM RA N H N
Sbjct: 99 FKIGWRDLKGLYEDIRKELFIST--AELREMSEYHFDGKGKAFRPIIVVLMARACNIHHN 156
Query: 81 --------RKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 126
++ +A+ AEMIHTASL+HDD+ID + RRGK +VN ++ KK +++
Sbjct: 157 NARNVQASQRAIALIAEMIHTASLVHDDIIDDASSRRGKHTVNKIWGEKKAVLA 210
Score = 126 (49.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 1 MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
+ AEMIHTASL+HDD+ID + RRGK +VN ++ KK +++
Sbjct: 170 LIAEMIHTASLVHDDIIDDASSRRGKHTVNKIWGEKKAVLA 210
Score = 121 (47.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 107 FRRGKPSVNVVYNH-KKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLN 165
F+ G + +Y +KEL +T ELR +S Y+FDG+GKA RP++ VLM RA N H N
Sbjct: 99 FKIGWRDLKGLYEDIRKELFIST--AELREMSEYHFDGKGKAFRPIIVVLMARACNIHHN 156
Query: 166 RKK 168
+
Sbjct: 157 NAR 159
>CGD|CAL0005672 [details] [associations]
symbol:orf19.7478 species:5476 "Candida albicans" [GO:0032476
"decaprenyl diphosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019418 "sulfide oxidation"
evidence=IEA] [GO:0070219 "cellular sulfide ion homeostasis"
evidence=IEA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IEA]
[GO:0008834 "di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0005672 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
KO:K05355 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000039 RefSeq:XP_718635.1 ProteinModelPortal:Q5AAL1
STRING:Q5AAL1 GeneID:3639664 KEGG:cal:CaO19.7478 Uniprot:Q5AAL1
Length = 510
Score = 134 (52.2 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 81 RKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 126
++++A EMIHTASL+HDDVID SD RRG+PS N+ + +K +++
Sbjct: 197 QRRLAEIVEMIHTASLLHDDVIDLSDSRRGRPSGNIAFTNKMAVLA 242
Score = 127 (49.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
EMIHTASL+HDDVID SD RRG+PS N+ + +K +++
Sbjct: 205 EMIHTASLLHDDVIDLSDSRRGRPSGNIAFTNKMAVLA 242
Score = 77 (32.2 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 11/29 (37%), Positives = 23/29 (79%)
Query: 48 LRTISTYYFDGQGKAVRPMVSVLMGRAIN 76
L +S+YYF+ +GK VRP++ +++ +A++
Sbjct: 76 LNRVSSYYFEAEGKNVRPLIVLILSKALS 104
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 180 (68.4 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 33/85 (38%), Positives = 52/85 (61%)
Query: 42 NTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRK-QVAMFAEMIHTASLIHDD 100
N++ + + + Y G GK +RPM++VL RA+ Y N +A E IHTA+L+HDD
Sbjct: 26 NSDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDD 85
Query: 101 VIDQSDFRRGKPSVNVVYNHKKELI 125
V+D+SD RRGK + N + + ++
Sbjct: 86 VVDESDMRRGKATANAAFGNAASVL 110
Score = 110 (43.8 bits), Expect = 0.00015, P = 0.00015
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 40
E IHTA+L+HDDV+D+SD RRGK + N + + ++
Sbjct: 74 EFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVL 110
>POMBASE|SPBPJ4664.01 [details] [associations]
symbol:dps1 "decaprenyl diphosphate synthase subunit
Dps1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070219 "cellular sulfide ion
homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IMP]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 PomBase:SPBPJ4664.01 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016740 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016209
GO:GO:0019646 GO:GO:0070219 GO:GO:0006119 GO:GO:0019418
GO:GO:0006744 eggNOG:COG0142 HOGENOM:HOG000009104 KO:K05355
OrthoDB:EOG4HB1V2 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0032476 EMBL:D84311 EMBL:D89265 PIR:JC5429
PIR:T43193 RefSeq:NP_595276.1 ProteinModelPortal:O43091
STRING:O43091 EnsemblFungi:SPBPJ4664.01.1 GeneID:2541402
KEGG:spo:SPBPJ4664.01 OMA:KPSVNAL NextBio:20802509 Uniprot:O43091
Length = 378
Score = 124 (48.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 83 QVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 126
++A EMIH ASL+HDDVID ++ RRG PS NV + +++ +++
Sbjct: 121 RLAQITEMIHIASLLHDDVIDHANVRRGSPSSNVAFGNRRSILA 164
Score = 118 (46.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
EMIH ASL+HDDVID ++ RRG PS NV + +++ +++
Sbjct: 127 EMIHIASLLHDDVIDHANVRRGSPSSNVAFGNRRSILA 164
Score = 71 (30.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 42 NTNQEELRTISTYYFDGQGKAVRPMVSVLMGRA 74
N+N E L S YY QGK +RP + +LM +A
Sbjct: 53 NSNSEFLEECSKYYTIAQGKQMRPSLVLLMSKA 85
>DICTYBASE|DDB_G0280293 [details] [associations]
symbol:coq1 "trans-prenyltransferase" species:44689
"Dictyostelium discoideum" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0006743 "ubiquinone metabolic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
dictyBase:DDB_G0280293 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GenomeReviews:CM000152_GR
GO:GO:0046872 EMBL:AAFI02000035 GO:GO:0006744 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0006743 RefSeq:XP_641356.1 HSSP:Q9WY08
ProteinModelPortal:Q54VJ9 STRING:Q54VJ9 EnsemblProtists:DDB0231590
GeneID:8622490 KEGG:ddi:DDB_G0280293 OMA:RIRPTIV Uniprot:Q54VJ9
Length = 456
Score = 172 (65.6 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 34/80 (42%), Positives = 56/80 (70%)
Query: 48 LRTISTYYFDGQGKAVRPMVSVLMGRAIN--YHLNRKQVAMFAEMIHTASLIHDDVIDQS 105
L +IS+YYF+ +GK +RP + +L+ +A++ H ++ ++A EMIHTASL+HDDVID++
Sbjct: 170 LSSISSYYFELKGKRIRPTIVLLLSKALSSTVHGSQLKLAEIVEMIHTASLVHDDVIDEA 229
Query: 106 DFRRGKPSVNVVYNHKKELI 125
RR S+N Y +K ++
Sbjct: 230 STRRDVISINHSYTNKLAIL 249
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 169 (64.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 42 NTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYH-LNRKQVAMFAEMIHTASLIHDD 100
N++ + + Y G GK +RP+++VL +A+ Y + A F E IHTA+L+HDD
Sbjct: 51 NSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDD 110
Query: 101 VIDQSDFRRGKPSVNVVYNHKKELI 125
V+D+SD RRGK + N + + ++
Sbjct: 111 VVDESDLRRGKATANAAFGNAASVL 135
Score = 115 (45.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 2 FAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 40
F E IHTA+L+HDDV+D+SD RRGK + N + + ++
Sbjct: 97 FIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVL 135
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 169 (64.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 31/85 (36%), Positives = 51/85 (60%)
Query: 42 NTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYH-LNRKQVAMFAEMIHTASLIHDD 100
N++ + + Y G GK +RP+++VL +A+ Y + A F E IHTA+L+HDD
Sbjct: 51 NSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDD 110
Query: 101 VIDQSDFRRGKPSVNVVYNHKKELI 125
V+D+SD RRGK + N + + ++
Sbjct: 111 VVDESDLRRGKATANAAFGNAASVL 135
Score = 115 (45.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 2 FAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 40
F E IHTA+L+HDDV+D+SD RRGK + N + + ++
Sbjct: 97 FIEFIHTATLLHDDVVDESDLRRGKATANAAFGNAASVL 135
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 165 (63.1 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 34/100 (34%), Positives = 62/100 (62%)
Query: 28 SVN-VVYNHKKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRK-QVA 85
+VN ++Y+ + ++ NQ + Y +G GK +RPM++VL RA Y ++ ++A
Sbjct: 20 AVNDLIYDQLQSDVALINQ-----LGIYIVNGGGKRMRPMLTVLAARAFAYQGDKHLEIA 74
Query: 86 MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 125
E IHTA+L+HDDV+D+S+ RRG+ + N ++ + ++
Sbjct: 75 AIIEFIHTATLLHDDVVDESNMRRGRETANALFGNSASVL 114
Score = 104 (41.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 40
E IHTA+L+HDDV+D+S+ RRG+ + N ++ + ++
Sbjct: 78 EFIHTATLLHDDVVDESNMRRGRETANALFGNSASVL 114
Score = 34 (17.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 106 DFRRGKPSVNVVYNHKKELISNTNQEEL 133
D GKP++ ++Y K N Q++L
Sbjct: 234 DLAEGKPTLPLLYAMKH---GNEAQQKL 258
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 164 (62.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 35/100 (35%), Positives = 60/100 (60%)
Query: 28 SVN-VVYNHKKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRK-QVA 85
+VN ++Y + ++ NQ + Y +G GK +RP++SVL RA++Y ++A
Sbjct: 24 AVNQLIYKQLESDVALINQ-----LGFYIINGGGKRLRPLLSVLAARAVDYQGEAHLKLA 78
Query: 86 MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 125
E IHTASL+HDDV+D+S RRG+ + N ++ + ++
Sbjct: 79 AIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVL 118
Score = 105 (42.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 40
E IHTASL+HDDV+D+S RRG+ + N ++ + ++
Sbjct: 82 EFIHTASLLHDDVVDESTLRRGRETANALFGNSASVL 118
Score = 48 (22.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 106 DFRRGKPSVNVVYNHKKELISNTNQEELRTISTYYFDGQGK-AVRPMVSVLMG-RAINY 162
D GKP++ ++Y I++ +EE + I G G A+ +V+ L A+NY
Sbjct: 238 DLAEGKPTLPLIY-----AIAHGTEEEKQLIRQAIEQGDGTHAIEKIVAALHHCGALNY 291
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 153 (58.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 60 GKAVRPMVSVLMGRAINYHLNR-KQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVY 118
GK +RP+ +L G +Y +N+ K VA+ EMIH ASL+HDDVID ++ RRGKP++ +
Sbjct: 72 GKRIRPVFVLLSGMFGDYDINKIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKW 131
Query: 119 NHK 121
+++
Sbjct: 132 DNR 134
Score = 109 (43.4 bits), Expect = 0.00025, P = 0.00025
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHK 36
EMIH ASL+HDDVID ++ RRGKP++ ++++
Sbjct: 102 EMIHMASLVHDDVIDDAELRRGKPTIKAKWDNR 134
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 60 GKAVRPMVSVLMGRAINYHLNR-KQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVY 118
GK +RP+ +L R Y L R K VA+ E+IH ASL+HDDVID +D RRG+P++ +
Sbjct: 44 GKRIRPVFVLLAARFGQYDLERMKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKW 103
Query: 119 NHK 121
+++
Sbjct: 104 SNR 106
Score = 107 (42.7 bits), Expect = 0.00039, P = 0.00039
Identities = 17/33 (51%), Positives = 27/33 (81%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHK 36
E+IH ASL+HDDVID +D RRG+P++ ++++
Sbjct: 74 ELIHMASLVHDDVIDDADLRRGRPTIKAKWSNR 106
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 148 (57.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 30 NVVYNHKKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRK-QVAMFA 88
NV +K+L S+ +R + Y GK +RPM+ +L + Y +R +A
Sbjct: 14 NVELQFRKDLESDVYL--IRKVGEYVLASGGKRIRPMLLLLSAKLCGYQGDRHVPLASVI 71
Query: 89 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 125
E IHTA+L+HDDV+D + RRG S N V+ ++ ++
Sbjct: 72 EFIHTATLLHDDVVDNATLRRGNASANEVWGNEASVL 108
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 148 (57.2 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 37 KELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYH--LNRKQVAMFAEMIHTA 94
KEL S+ E TI+ + GK +RP+V +L RA Y + +++A E IHTA
Sbjct: 32 KELSSHVPLIE--TITHHIIQSGGKRLRPLVVLLTARACGYEQDVEHQELATVIEFIHTA 89
Query: 95 SLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 125
+L+HDDV+D+S RRG+ + N ++ + ++
Sbjct: 90 TLLHDDVVDKSTQRRGQKTANALWGNSASVL 120
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 147 (56.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 26/76 (34%), Positives = 50/76 (65%)
Query: 51 ISTYYFDGQGKAVRPMVSVLMGRAINYH-LNRKQVAMFAEMIHTASLIHDDVIDQSDFRR 109
++ + + GK +RPM+++ R Y + ++A E IHTA+L+HDDV+D+S RR
Sbjct: 43 VTAHLVEAGGKRLRPMLTLAAARLCGYQGEDHVKLAATVEFIHTATLLHDDVVDESGQRR 102
Query: 110 GKPSVNVVYNHKKELI 125
G+P+ N+++++K ++
Sbjct: 103 GRPTANLLWDNKSSVL 118
Score = 114 (45.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 18/37 (48%), Positives = 31/37 (83%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 40
E IHTA+L+HDDV+D+S RRG+P+ N+++++K ++
Sbjct: 82 EFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVL 118
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 147 (56.8 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 26/76 (34%), Positives = 50/76 (65%)
Query: 51 ISTYYFDGQGKAVRPMVSVLMGRAINYH-LNRKQVAMFAEMIHTASLIHDDVIDQSDFRR 109
++ + + GK +RPM+++ R Y + ++A E IHTA+L+HDDV+D+S RR
Sbjct: 43 VTAHLVEAGGKRLRPMLTLAAARLCGYQGEDHVKLAATVEFIHTATLLHDDVVDESGQRR 102
Query: 110 GKPSVNVVYNHKKELI 125
G+P+ N+++++K ++
Sbjct: 103 GRPTANLLWDNKSSVL 118
Score = 114 (45.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 18/37 (48%), Positives = 31/37 (83%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 40
E IHTA+L+HDDV+D+S RRG+P+ N+++++K ++
Sbjct: 82 EFIHTATLLHDDVVDESGQRRGRPTANLLWDNKSSVL 118
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 145 (56.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 32/97 (32%), Positives = 55/97 (56%)
Query: 26 KPSVNVVYNHKKELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNR-KQV 84
+ +NV+ K+ +++ Q + + + GK +RP+ +L G+ +Y L+ K V
Sbjct: 11 RSDINVIEKELKKTVAS-EQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHV 69
Query: 85 AMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHK 121
A+ E+IH ASL+HDDVID + RRG +VN + +
Sbjct: 70 AVALELIHMASLVHDDVIDAAFLRRGSATVNAKWGDR 106
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 144 (55.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 29/93 (31%), Positives = 57/93 (61%)
Query: 37 KELISNTNQEELRTIST---YYFDGQGKAVRPMVSVLMGRAINYHL-NRKQVAMFAEMIH 92
+ LI + N + + I+ + GK +RP++ ++ + +N + N+ +A E+IH
Sbjct: 24 ESLILHQNNKHITLITEIVQHLIKSGGKRIRPIIFFIICKMLNCNNENKVPIAAAIELIH 83
Query: 93 TASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 125
A+L+HDDVID+S+ RRG+ + NV++ +K ++
Sbjct: 84 NATLLHDDVIDESELRRGEKTSNVIWGNKASIL 116
Score = 111 (44.1 bits), Expect = 0.00011, P = 0.00011
Identities = 18/37 (48%), Positives = 30/37 (81%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 40
E+IH A+L+HDDVID+S+ RRG+ + NV++ +K ++
Sbjct: 80 ELIHNATLLHDDVIDESELRRGEKTSNVIWGNKASIL 116
>WB|WBGene00000761 [details] [associations]
symbol:coq-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0040011 GO:GO:0040017 GO:GO:0006744 eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 EMBL:FO080645
PIR:G87775 PIR:T25573 RefSeq:NP_491588.1 ProteinModelPortal:P91093
SMR:P91093 STRING:P91093 PaxDb:P91093 EnsemblMetazoa:C24A11.9
GeneID:172190 KEGG:cel:CELE_C24A11.9 UCSC:C24A11.9 CTD:172190
WormBase:C24A11.9 InParanoid:P91093 OMA:PNRNEST NextBio:874409
Uniprot:P91093
Length = 393
Score = 139 (54.0 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 25/46 (54%), Positives = 36/46 (78%)
Query: 80 NRKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 125
N+ ++ M AEMIHTASL+HDDVID+++ RRG SVN V+ +K ++
Sbjct: 134 NQYKIGMIAEMIHTASLVHDDVIDEANTRRGSASVNAVWGNKMSVL 179
Score = 130 (50.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 1 MFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 40
M AEMIHTASL+HDDVID+++ RRG SVN V+ +K ++
Sbjct: 140 MIAEMIHTASLVHDDVIDEANTRRGSASVNAVWGNKMSVL 179
Score = 35 (17.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 80 NRKQVAMFAEMIHTASLIHD 99
+RK ++FA +A+++ D
Sbjct: 240 HRKTASLFASSCRSAAILAD 259
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 133 (51.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 30/92 (32%), Positives = 52/92 (56%)
Query: 36 KKELISNTNQ--EELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNR-KQVAMFAEMIH 92
++ELI ++ E L + + GK +RP ++L + +Y + K +A+ E+IH
Sbjct: 23 EQELIKEVSERNEFLHDPAMHLLKAGGKRLRPAFALLAAKLGDYDFEKVKPLAVALELIH 82
Query: 93 TASLIHDDVIDQSDFRRGKPSVNVVYNHKKEL 124
A+L+HDDV+D S RRG P+V + +K +
Sbjct: 83 MATLVHDDVVDNSMLRRGLPTVKANWGNKMSI 114
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 133 (51.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 30/92 (32%), Positives = 52/92 (56%)
Query: 36 KKELISNTNQ--EELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNR-KQVAMFAEMIH 92
++ELI ++ E L + + GK +RP ++L + +Y + K +A+ E+IH
Sbjct: 23 EQELIKEVSERNEFLHDPAMHLLKAGGKRLRPAFALLAAKLGDYDFEKVKPLAVALELIH 82
Query: 93 TASLIHDDVIDQSDFRRGKPSVNVVYNHKKEL 124
A+L+HDDV+D S RRG P+V + +K +
Sbjct: 83 MATLVHDDVVDNSMLRRGLPTVKANWGNKMSI 114
>SGD|S000000207 [details] [associations]
symbol:COQ1 "Hexaprenyl pyrophosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IMP;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232 SGD:S000000207
GO:GO:0005739 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:BK006936 GO:GO:0006744
EMBL:J05547 EMBL:Z35872 EMBL:AY558099 EMBL:Z26494 PIR:A36625
RefSeq:NP_009557.1 ProteinModelPortal:P18900 SMR:P18900
DIP:DIP-1103N IntAct:P18900 MINT:MINT-427151 STRING:P18900
PaxDb:P18900 PRIDE:P18900 EnsemblFungi:YBR003W GeneID:852288
KEGG:sce:YBR003W CYGD:YBR003w eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 KO:K05355
OMA:RASSIFA OrthoDB:EOG4HB1V2 BioCyc:MetaCyc:MONOMER-13702
BRENDA:2.5.1.33 NextBio:970928 Genevestigator:P18900
GermOnline:YBR003W GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Uniprot:P18900
Length = 473
Score = 133 (51.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 81 RKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 126
++++A EMIHTASL+HDDVID SD RRG+PS N + +K +++
Sbjct: 175 QRRLAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNKMAVLA 220
Score = 126 (49.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
EMIHTASL+HDDVID SD RRG+PS N + +K +++
Sbjct: 183 EMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNKMAVLA 220
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 126 (49.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/92 (31%), Positives = 54/92 (58%)
Query: 38 ELISNTNQE---ELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRK-QVAMFAEMIHT 93
+L+S + ++ E+ + Y G GK +RP +S+L + + +A +EM+H
Sbjct: 23 KLVSESRKQSFPEMAEMLDYILVG-GKVLRPALSMLSAMCFGTGIKKVLPLATSSEMLHI 81
Query: 94 ASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 125
A+L+HDD ID++D RR + +VN V+ +K ++
Sbjct: 82 ATLVHDDAIDKADTRRSRRTVNSVWGLEKAIL 113
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 125 (49.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 43 TNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRK-QVAMFAEMIHTASLIHDDV 101
++ E + + + GK VRPM +L G + + + A+ E++H ASL+HDD
Sbjct: 27 SDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDLIRTAVSLELVHMASLVHDDY 86
Query: 102 IDQSDFRRGKPSVNVVYN 119
ID SD RRG SV++ ++
Sbjct: 87 IDNSDMRRGNTSVHIAFD 104
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 126 (49.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 56 FDGQGKAVRPMVSVLMGRAI-------NYHLNRKQVAMFAEMIHTASLIHDDVIDQSDFR 108
F GK +RP + L+ RA + +++ EMIHTASLIHDDV+D+SD R
Sbjct: 132 FSAGGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIHTASLIHDDVLDESDMR 191
Query: 109 RGKPSVNVVYNHKKELIS 126
RG+ +V+ ++ + +++
Sbjct: 192 RGRETVHELFGTRVAVLA 209
Score = 113 (44.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
EMIHTASLIHDDV+D+SD RRG+ +V+ ++ + +++
Sbjct: 172 EMIHTASLIHDDVLDESDMRRGRETVHELFGTRVAVLA 209
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 125 (49.1 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 56 FDGQGKAVRPMVSVLMGRAI-------NYHLNRKQVAMFAEMIHTASLIHDDVIDQSDFR 108
F GK +RP + L+ A +++A EMIHTASLIHDDV+D+SD R
Sbjct: 121 FGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDVLDESDMR 180
Query: 109 RGKPSVNVVYNHKKELIS 126
RGK +V+ ++ + +++
Sbjct: 181 RGKETVHELFGTRVAVLA 198
Score = 116 (45.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
EMIHTASLIHDDV+D+SD RRGK +V+ ++ + +++
Sbjct: 161 EMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLA 198
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 122 (48.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 46 EELRTISTYYFDGQGKAVRPMVSVLMGRAIN-YHLNRKQVAMFA--EMIHTASLIHDDVI 102
+ L S + GK +RP++++L R + + + + A E HT SLIHDD++
Sbjct: 16 DRLSGASLHLIKAGGKRLRPLITLLTARMLGGLEAEARAIPLAASIETAHTFSLIHDDIM 75
Query: 103 DQSDFRRGKPSVNVVY 118
D+ + RRG P+ +VVY
Sbjct: 76 DRDEVRRGVPTTHVVY 91
Score = 96 (38.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVY 33
E HT SLIHDD++D+ + RRG P+ +VVY
Sbjct: 62 ETAHTFSLIHDDIMDRDEVRRGVPTTHVVY 91
Score = 45 (20.9 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 105 SDFRRGKPSVNVVYNHKK 122
+D RRGK ++ V+Y KK
Sbjct: 225 NDLRRGKKTLLVIYAVKK 242
>TIGR_CMR|NSE_0238 [details] [associations]
symbol:NSE_0238 "polyprenyl synthetase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_506132.1 ProteinModelPortal:Q2GEG4 STRING:Q2GEG4
GeneID:3932073 KEGG:nse:NSE_0238 PATRIC:22680571 OMA:MIYYKTA
ProtClustDB:CLSK2527623 BioCyc:NSEN222891:GHFU-268-MONOMER
Uniprot:Q2GEG4
Length = 321
Score = 122 (48.0 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 60 GKAVRPMVSVL-MGRAINYHLNRK-QVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVV 117
GK +R ++S+L N N + + A E+IH A+L+HDDV+D++ RRGKP++ +
Sbjct: 45 GKRIRALLSLLSFALCKNADTNAEIRAAATIELIHNATLMHDDVVDENSIRRGKPNIKSI 104
Query: 118 YNHKKELIS 126
+ +K +++
Sbjct: 105 HGNKISVLT 113
Score = 107 (42.7 bits), Expect = 0.00039, P = 0.00039
Identities = 16/38 (42%), Positives = 30/38 (78%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
E+IH A+L+HDDV+D++ RRGKP++ ++ +K +++
Sbjct: 76 ELIHNATLMHDDVVDENSIRRGKPNIKSIHGNKISVLT 113
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 115 (45.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 60 GKAVRP-MVSVLMGRAINYHLNRKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVY 118
GK RP M+ G R VA E +H+A+L+HDDV+D+SD RRG + N ++
Sbjct: 39 GKRTRPVMLLAACGMLGCTDARRIVVAAAIEFLHSATLLHDDVVDKSDMRRGVETANSIW 98
Query: 119 NHKKELI 125
+K ++
Sbjct: 99 GNKASIL 105
Score = 103 (41.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 40
E +H+A+L+HDDV+D+SD RRG + N ++ +K ++
Sbjct: 69 EFLHSATLLHDDVVDKSDMRRGVETANSIWGNKASIL 105
Score = 56 (24.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 79 LNRKQVAMFAEMIHTASLIHD-DVIDQSDFRRGKPSVNVVYNHKKELISNT-NQEELRTI 136
++ K +F+ +A+++HD + ++ R + +V+ +++ T NQ EL
Sbjct: 162 ISSKTAVLFSAACESAAVLHDVGTLQRNALRDWGFNFGIVFQILDDILDYTANQNELGK- 220
Query: 137 STYYFDGQGKAVRPMVSVLMG 157
TY GK P++ G
Sbjct: 221 RTYNDIVSGKVTLPLIIAYEG 241
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 120 (47.3 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 36/107 (33%), Positives = 52/107 (48%)
Query: 24 RGKPSVNVVYNHKKELISN-TNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINY-HLNR 81
R SVN + L+ T QE +R Y GK VRP++ + +
Sbjct: 72 RKAESVNAALDVSVPLLKPLTIQEAVR----YSLLAGGKRVRPLLCIAACELVGGDEATA 127
Query: 82 KQVAMFAEMIHTASLIHDDV--IDQSDFRRGKPSVNVVYNHKKELIS 126
A EMIHT+SLIHDD+ +D +D RRGKP+ + VY +++
Sbjct: 128 MSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLA 174
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 119 (46.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 36 KKELISNTNQEE----LRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRKQVAMFA-EM 90
+++L+S N+ + LR Y + GK +RP++ +A + N A A EM
Sbjct: 17 EEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEM 76
Query: 91 IHTASLIHDDV--IDQSDFRRGKPSVNVVYNHKKELIS 126
IHT SL+HDD+ +D D RRGKP+ + V+ +++
Sbjct: 77 IHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 119 (46.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 36 KKELISNTNQEE----LRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRKQVAMFA-EM 90
+++L+S N+ + LR Y + GK +RP++ +A + N A A EM
Sbjct: 17 EEKLVSYANELQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEM 76
Query: 91 IHTASLIHDDV--IDQSDFRRGKPSVNVVYNHKKELIS 126
IHT SL+HDD+ +D D RRGKP+ + V+ +++
Sbjct: 77 IHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLA 114
>UNIPROTKB|Q83C74 [details] [associations]
symbol:CBU_1255 "Dimethylallyltransferase" species:227377
"Coxiella burnetii RSA 493" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
KO:K00795 RefSeq:NP_820249.1 ProteinModelPortal:Q83C74
GeneID:1209160 KEGG:cbu:CBU_1255 PATRIC:17931243 OMA:MACAVEC
ProtClustDB:CLSK914646 BioCyc:CBUR227377:GJ7S-1240-MONOMER
Uniprot:Q83C74
Length = 267
Score = 118 (46.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 30/101 (29%), Positives = 53/101 (52%)
Query: 34 NHKK-ELISNTNQ--EELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRKQV---AMF 87
NHK ++ + Q + L TY GK +RP+ + G ++ ++ Q+ A
Sbjct: 12 NHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATG--FSFEVDPAQIDNAACA 69
Query: 88 AEMIHTASLIHDDV--IDQSDFRRGKPSVNVVYNHKKELIS 126
E++H SL+HDD+ +D DFRRGKPS + ++ +++
Sbjct: 70 IELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILT 110
>TIGR_CMR|CBU_1255 [details] [associations]
symbol:CBU_1255 "geranyltranstransferase, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 KO:K00795 RefSeq:NP_820249.1
ProteinModelPortal:Q83C74 GeneID:1209160 KEGG:cbu:CBU_1255
PATRIC:17931243 OMA:MACAVEC ProtClustDB:CLSK914646
BioCyc:CBUR227377:GJ7S-1240-MONOMER Uniprot:Q83C74
Length = 267
Score = 118 (46.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 30/101 (29%), Positives = 53/101 (52%)
Query: 34 NHKK-ELISNTNQ--EELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRKQV---AMF 87
NHK ++ + Q + L TY GK +RP+ + G ++ ++ Q+ A
Sbjct: 12 NHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATG--FSFEVDPAQIDNAACA 69
Query: 88 AEMIHTASLIHDDV--IDQSDFRRGKPSVNVVYNHKKELIS 126
E++H SL+HDD+ +D DFRRGKPS + ++ +++
Sbjct: 70 IELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILT 110
>ASPGD|ASPL0000038406 [details] [associations]
symbol:AN10340 species:162425 "Emericella nidulans"
[GO:0032476 "decaprenyl diphosphate synthase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016209 "antioxidant
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019418 "sulfide oxidation" evidence=IEA]
[GO:0070219 "cellular sulfide ion homeostasis" evidence=IEA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001306
GO:GO:0006744 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 ProteinModelPortal:C8VJN5
EnsemblFungi:CADANIAT00010341 OMA:YLHKTYL Uniprot:C8VJN5
Length = 456
Score = 105 (42.0 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 80 NRKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 126
+++++A E+IHTASL+HDDVID + RR S N+ + +K +++
Sbjct: 195 SQRRLAEITELIHTASLLHDDVIDNALTRRSSNSANIEFGNKMAVLA 241
Score = 54 (24.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 48 LRTISTYYFDGQGKAVRPMVSVLMGRA 74
L ++ YY +GK +RP++ +LM +A
Sbjct: 106 LDKVAKYYTRSEGKHMRPLLVLLMSQA 132
>TAIR|locus:2062315 [details] [associations]
symbol:GPS1 "geranyl diphosphate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IGI;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 GO:GO:0009507
EMBL:CP002685 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006744 GO:GO:0009790 EMBL:AC004077
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347 GO:GO:0004659
OMA:KPSVNAL GO:GO:0052924 EMBL:Y17376 EMBL:AY093006 EMBL:BT020524
IPI:IPI00537358 IPI:IPI00538487 IPI:IPI00657038 PIR:A84759
RefSeq:NP_001031483.1 RefSeq:NP_850234.1 UniGene:At.25503 PDB:3APZ
PDB:3AQ0 PDBsum:3APZ PDBsum:3AQ0 ProteinModelPortal:Q5HZ00
SMR:Q5HZ00 STRING:Q5HZ00 PRIDE:Q5HZ00 EnsemblPlants:AT2G34630.2
GeneID:818028 KEGG:ath:AT2G34630 TAIR:At2g34630 InParanoid:Q8RWM1
KO:K14066 ProtClustDB:PLN02890 EvolutionaryTrace:Q9FT89
Genevestigator:Q5HZ00 Uniprot:Q5HZ00
Length = 422
Score = 119 (46.9 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 79 LNRKQVAMFAEMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 126
+ ++ +A EMIH ASL+HDDV+D +D RRG S+NVV +K +++
Sbjct: 161 VRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLA 208
Score = 112 (44.5 bits), Expect = 0.00013, P = 0.00013
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELIS 41
EMIH ASL+HDDV+D +D RRG S+NVV +K +++
Sbjct: 171 EMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLA 208
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 117 (46.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 37 KELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRK-QVAMFAEMIHTAS 95
KE I+ L+ + + GK +RP++ +L+ + +R A+ EM+H+AS
Sbjct: 27 KESITLIEDPGLKKMVEHVCHSGGKRIRPIILLLVSEICSGSYSRSLNAALAVEMMHSAS 86
Query: 96 LIHDDVIDQSDFRRGKPS 113
LIHDD++DQ RR PS
Sbjct: 87 LIHDDLLDQGLVRRNLPS 104
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 116 (45.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/62 (43%), Positives = 36/62 (58%)
Query: 60 GKAVRPMVSVLMGRAINYHLNRKQVAMFA-EMIHTASLIHDDV--IDQSDFRRGKPSVNV 116
GK VRPM+ + + + A A EMIHT SLIHDD+ +D D RRGKP+ +
Sbjct: 117 GKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK 176
Query: 117 VY 118
+Y
Sbjct: 177 IY 178
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 115 (45.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 60 GKAVRPMVSVLMGRAINYHLNR-KQVAMFAEMIHTASLIHDDV--IDQSDFRRGKPSVNV 116
GK +RP ++ + G A++ LN VA E IH SL+HDD+ +D D RRGKP+ +
Sbjct: 44 GKRMRPYLAYITGEAVSADLNDIDAVAGALECIHAYSLLHDDLPAMDDDDLRRGKPTCHK 103
Query: 117 VYNHKKELISNTNQEELRTIS 137
++ +++ + L+T++
Sbjct: 104 AFDEATAILAG---DALQTLA 121
>TIGR_CMR|ECH_0455 [details] [associations]
symbol:ECH_0455 "putative geranyltranstransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 OMA:ICKDISK RefSeq:YP_507273.1
ProteinModelPortal:Q2GH10 STRING:Q2GH10 GeneID:3926960
KEGG:ech:ECH_0455 PATRIC:20576384 ProtClustDB:CLSK749162
BioCyc:ECHA205920:GJNR-456-MONOMER Uniprot:Q2GH10
Length = 267
Score = 113 (44.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 37 KELISNTNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNR-KQVAMFAEMIHTAS 95
+ ++ NQ+ L T Y GK +RP + + N +++R V+ E+IH S
Sbjct: 13 ESILPENNQDILLTSMRYSMFAPGKHIRPFLVNASAQIFNVNVDRILPVSAAVEIIHVYS 72
Query: 96 LIHDDV--IDQSDFRRGKPSVNVVYNHKKELISNTNQEELRTIS 137
LIHDD+ ID + RRG+ S + +N E I+ + L T++
Sbjct: 73 LIHDDLPGIDNENIRRGQASSHKKFN---EAIAILTGDALLTLA 113
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 108 (43.1 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 4 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 40
E+IH ASL+HDD+ID+S+ RRG SVN + K L+
Sbjct: 56 ELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALM 92
Score = 108 (43.1 bits), Expect = 0.00025, P = 0.00025
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 89 EMIHTASLIHDDVIDQSDFRRGKPSVNVVYNHKKELI 125
E+IH ASL+HDD+ID+S+ RRG SVN + K L+
Sbjct: 56 ELIHLASLLHDDIIDESELRRGARSVNAEFGTKNALM 92
Score = 34 (17.0 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 105 SDFRRGKPSVNVVY 118
+DF+ GK ++ +Y
Sbjct: 207 NDFKEGKTTLPYIY 220
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 112 (44.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 35/111 (31%), Positives = 53/111 (47%)
Query: 11 LIHDDVIDQSDFRRGKPSVNVVYNHKKELISNTNQEELRTISTYYFDGQGKAVRPMVSVL 70
+IH+ D + + GK N V +S ++ Y +GK VRP++ +
Sbjct: 48 IIHNH-FDFTSYMIGK--ANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIA 104
Query: 71 MGRAINYHLNRKQVAMFA-EMIHTASLIHDDV--IDQSDFRRGKPSVNVVY 118
+ + A A EMIHT SLIHDD+ +D D RRGKP+ + V+
Sbjct: 105 ACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVF 155
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 111 (44.1 bits), Expect = 0.00012, P = 0.00012
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 54 YYFDGQGKAVRPMVSVLMGRAINYHLNRKQVAMFA---EMIHTASLIHDDVIDQSDFRRG 110
+ F+ GK RP+ +VL + I + V + EMIH A+L HDDV+D++ RRG
Sbjct: 50 HLFNAGGKRFRPLFTVLSAQ-IGPQPDAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRG 108
Query: 111 KPSVNVVYNHKKELIS 126
PS N + + +++
Sbjct: 109 APSANAQWGNNVAILA 124
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 111 (44.1 bits), Expect = 0.00013, P = 0.00013
Identities = 32/83 (38%), Positives = 43/83 (51%)
Query: 43 TNQEELRTISTYYFDGQGKAVRPMVSVLMGRAINY-HLNRKQVAMFAEMIHTASLIHDDV 101
T QE +R Y GK VRP++ + + A EMIHT+SLIHDD+
Sbjct: 89 TIQEAVR----YSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDL 144
Query: 102 --IDQSDFRRGKPSVNVVYNHKK 122
+D +D RRGKP+ NHK+
Sbjct: 145 PCMDDADLRRGKPT-----NHKE 162
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 111 (44.1 bits), Expect = 0.00014, P = 0.00014
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 60 GKAVRPMVSVLMGRAINY-HLNRKQVAMFAEMIHTASLIHDDV--IDQSDFRRGKPSVNV 116
GK VRP++ + + A EMIHT+SLIHDD+ +D +D RRGKP+ +
Sbjct: 105 GKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHK 164
Query: 117 VYNHKKELIS 126
V+ +++
Sbjct: 165 VFGEHMAVLA 174
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 111 (44.1 bits), Expect = 0.00015, P = 0.00015
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 60 GKAVRPMVSVLMGRAINYHLNRKQVAMFA-EMIHTASLIHDDV--IDQSDFRRGKPSVNV 116
GK VRP++ + + N A A EMIHT SLI DD+ +D D RRGKP+ +
Sbjct: 124 GKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHK 183
Query: 117 VYNHKKELIS 126
VY ++S
Sbjct: 184 VYGEGVAILS 193
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 109 (43.4 bits), Expect = 0.00028, P = 0.00028
Identities = 38/126 (30%), Positives = 62/126 (49%)
Query: 8 TASLIHDDVIDQSD-FRRGKPSVNVVYNH---KKELISNTN------QEELRTIST--YY 55
++S++ V+ + D R+ +PS ++ K EL++ +E L+ Y
Sbjct: 51 SSSIVSSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYS 110
Query: 56 FDGQGKAVRPMVSVLMGRAINYHLNRKQVAMFA-EMIHTASLIHDDV--IDQSDFRRGKP 112
GK VRP++ + + + A A EMIHT SLIHDD+ +D D RRGKP
Sbjct: 111 LLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKP 170
Query: 113 SVNVVY 118
+ + V+
Sbjct: 171 TNHKVF 176
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 106 (42.4 bits), Expect = 0.00048, P = 0.00048
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 56 FDGQGKAVRPMVSVLMGRAINYHLNRKQVAMFA-EMIHTASLIHDDV--IDQSDFRRGKP 112
F G GK VRP++ + A+ A A EMIHT SLIHDD+ +D DFRRG+P
Sbjct: 41 FAG-GKRVRPILMLAACDAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRP 99
Query: 113 SVNVVY 118
+ + V+
Sbjct: 100 TNHKVF 105
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 106 (42.4 bits), Expect = 0.00048, P = 0.00048
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 56 FDGQGKAVRPMVSVLMGRAINYHLNRKQVAMFA-EMIHTASLIHDDV--IDQSDFRRGKP 112
F G GK VRP++ + A+ A A EMIHT SLIHDD+ +D DFRRG+P
Sbjct: 41 FAG-GKRVRPILMLAACDAVGGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRP 99
Query: 113 SVNVVY 118
+ + V+
Sbjct: 100 TNHKVF 105
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 105 (42.0 bits), Expect = 0.00062, P = 0.00062
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 60 GKAVRPMVSVLMGRAINYHLNRKQV-AMFAEMIHTASLIHDDV--IDQSDFRRGKPSVNV 116
GK RP + + G+ + L+ A E IH SLIHDD+ +D + RRGKP+ ++
Sbjct: 42 GKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHI 101
Query: 117 VYNHKKELISNTNQEELRTIS-TYYFDGQGKAVRPMVSVLMGRAI 160
++ +++ + L+T++ T +G A V M +A+
Sbjct: 102 QFDEATAILTG---DALQTLAFTILAEGDLSAAGETQRVAMLQAL 143
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 105 (42.0 bits), Expect = 0.00062, P = 0.00062
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 60 GKAVRPMVSVLMGRAINYHLNRKQV-AMFAEMIHTASLIHDDV--IDQSDFRRGKPSVNV 116
GK RP + + G+ + L+ A E IH SLIHDD+ +D + RRGKP+ ++
Sbjct: 42 GKRARPYLVYITGQMLGCELSDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHI 101
Query: 117 VYNHKKELISNTNQEELRTIS-TYYFDGQGKAVRPMVSVLMGRAI 160
++ +++ + L+T++ T +G A V M +A+
Sbjct: 102 QFDEATAILTG---DALQTLAFTILAEGDLSAAGETQRVAMLQAL 143
>UNIPROTKB|Q97W92 [details] [associations]
symbol:gdS-2 "Hexaprenyl pyrophosphate synthase"
species:273057 "Sulfolobus solfataricus P2" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IDA] [GO:0052922 "hexaprenyl
diphosphate synthase (geranylgeranyl-diphosphate specific)
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 EMBL:AE006641
GenomeReviews:AE006641_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 PIR:A99405 RefSeq:NP_343706.1
PDB:2AZJ PDB:2AZK PDBsum:2AZJ PDBsum:2AZK ProteinModelPortal:Q97W92
SMR:Q97W92 GeneID:1453823 KEGG:sso:SSO2345 HOGENOM:HOG000232204
OMA:KDTAVGA ProtClustDB:CLSK803315 BioCyc:MetaCyc:MONOMER-15679
EvolutionaryTrace:Q97W92 GO:GO:0052922 Uniprot:Q97W92
Length = 281
Score = 104 (41.7 bits), Expect = 0.00080, P = 0.00080
Identities = 35/109 (32%), Positives = 55/109 (50%)
Query: 38 ELISNTNQE-ELRTISTYYFDGQGKAVRPMVSVLMGRAINYHLNRKQVAMFA-EMIHTAS 95
E N+N++ +L IS+Y GK R +++ A+ + A E++H+AS
Sbjct: 19 EQFLNSNRDWDLVDISSYILK-DGKRFRGTLNMFFTVALGGDIKDSYGGALAIEILHSAS 77
Query: 96 LIHDDVIDQSDFRRGKPSVNVVYNHKKEL-ISN-TNQEELRTISTYYFD 142
L DD++D RRG + VVY ++K + I+N LR I T Y D
Sbjct: 78 LALDDIVDLDATRRGDKAAWVVYGNRKVIFITNYLIPTALRIIQTSYGD 126
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 105 (42.0 bits), Expect = 0.00080, P = 0.00080
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 60 GKAVRPMVSVLMGRAINYHLNRKQVAMFA-EMIHTASLIHDDV--IDQSDFRRGKPSVNV 116
GK VRPM+ ++ + + A A EMIH ASLI DD+ +D RRGKP+ +
Sbjct: 79 GKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHK 138
Query: 117 VYNHKKELISNTNQEELRTIST 138
V+ K ++++ L T
Sbjct: 139 VFGEKTSILASNALRSLAVKQT 160
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 105 (42.0 bits), Expect = 0.00095, P = 0.00095
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 60 GKAVRPMVSVLMGRAINYHLNRK-QVAMFAEMIHTASLIHDDV--IDQSDFRRGKPSVNV 116
GK VRP++ + + Q A EMIHT SLI DD+ +D D RRGKP+ +
Sbjct: 120 GKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHK 179
Query: 117 VYNHKKELIS 126
V+ ++S
Sbjct: 180 VFGESVAILS 189
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 168 168 0.00079 108 3 11 22 0.37 32
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 60
No. of states in DFA: 465 (50 KB)
Total size of DFA: 112 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.18u 0.10s 16.28t Elapsed: 00:00:05
Total cpu time: 16.19u 0.10s 16.29t Elapsed: 00:00:05
Start: Thu Aug 15 16:02:02 2013 End: Thu Aug 15 16:02:07 2013