Your job contains 1 sequence.
>psy5533
MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA
CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY
QKGLVVLTDLVLNRMK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5533
(136 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0051005 - symbol:qless "qless" species:7227 "Droso... 566 7.8e-55 1
UNIPROTKB|E1BZW8 - symbol:PDSS1 "Uncharacterized protein"... 418 3.7e-39 1
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 418 3.7e-39 1
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 414 9.9e-39 1
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 410 2.6e-38 1
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 407 5.5e-38 1
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 407 5.5e-38 1
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 392 2.1e-36 1
WB|WBGene00000761 - symbol:coq-1 species:6239 "Caenorhabd... 368 7.4e-34 1
UNIPROTKB|I3LJ49 - symbol:I3LJ49 "Uncharacterized protein... 352 3.7e-32 1
ASPGD|ASPL0000038406 - symbol:AN10340 species:162425 "Eme... 325 2.7e-29 1
CGD|CAL0005672 - symbol:orf19.7478 species:5476 "Candida ... 322 1.2e-28 1
DICTYBASE|DDB_G0280293 - symbol:coq1 "trans-prenyltransfe... 315 3.1e-28 1
SGD|S000000207 - symbol:COQ1 "Hexaprenyl pyrophosphate sy... 308 2.8e-27 1
POMBASE|SPBPJ4664.01 - symbol:dps1 "decaprenyl diphosphat... 295 4.0e-26 1
TAIR|locus:2062315 - symbol:GPS1 "geranyl diphosphate syn... 259 5.6e-22 1
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 241 5.1e-20 1
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 239 9.7e-20 1
UNIPROTKB|H0YEE6 - symbol:PDSS1 "Decaprenyl-diphosphate s... 229 4.0e-19 1
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 195 2.7e-15 1
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 187 2.4e-14 1
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 173 9.9e-13 1
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 169 3.2e-12 1
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 169 3.2e-12 1
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 162 1.6e-11 1
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 156 7.2e-11 1
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 154 1.1e-10 1
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 153 1.9e-10 1
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 152 2.1e-10 1
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 152 2.1e-10 1
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 151 2.9e-10 1
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 149 4.4e-10 1
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 145 1.3e-09 1
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 140 4.2e-09 1
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 134 1.9e-08 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 132 2.7e-08 1
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 131 4.1e-08 1
GENEDB_PFALCIPARUM|PFB0130w - symbol:PFB0130w "polyprenyl... 134 5.0e-08 1
UNIPROTKB|O96130 - symbol:OPP "Octaprenyl pyrophosphate s... 134 5.0e-08 1
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 129 7.1e-08 1
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 125 2.0e-07 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 125 2.0e-07 1
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 125 2.3e-07 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 122 3.4e-07 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 122 3.4e-07 1
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 122 4.6e-07 1
UNIPROTKB|P0A5H8 - symbol:MT3506 "(2E,6E)-farnesyl diphos... 118 1.4e-06 1
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 116 2.1e-06 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 116 2.5e-06 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 115 2.9e-06 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 115 2.9e-06 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 113 4.3e-06 1
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 113 5.1e-06 1
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 113 5.1e-06 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 112 6.2e-06 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 110 7.2e-06 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 110 7.2e-06 1
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 111 8.3e-06 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 109 9.1e-06 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 109 9.1e-06 1
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 110 9.6e-06 1
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 105 2.6e-05 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 101 7.0e-05 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 101 7.0e-05 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 99 0.00012 1
TIGR_CMR|SO_1526 - symbol:SO_1526 "geranyltranstransferas... 98 0.00044 1
>FB|FBgn0051005 [details] [associations]
symbol:qless "qless" species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 EMBL:AE014297 GO:GO:0043066 GO:GO:0033554
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0014019
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 OMA:KPSVNAL
FlyBase:FBgn0051005 EMBL:BT044087 RefSeq:NP_733425.1
UniGene:Dm.5492 SMR:Q9V9Z3 IntAct:Q9V9Z3 MINT:MINT-1009288
STRING:Q9V9Z3 EnsemblMetazoa:FBtr0085769 GeneID:43697
KEGG:dme:Dmel_CG31005 UCSC:CG31005-RA CTD:43697 InParanoid:Q9V9Z3
GenomeRNAi:43697 NextBio:835306 Uniprot:Q9V9Z3
Length = 436
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 104/136 (76%), Positives = 123/136 (90%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
++ ADD ++EVAF+YGRN+G+AFQLVDD+LDF+SS++ MGKPTAADLKLGLATAPVLFA
Sbjct: 301 VIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFA 360
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
CEK+PELNPM+MRRF EPGDVE+AFE VHKS GLEQT+FLA+KHC EA+RLA L ESPY
Sbjct: 361 CEKYPELNPMVMRRFSEPGDVERAFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPY 420
Query: 121 QKGLVVLTDLVLNRMK 136
QKGL V+ DLV+NRMK
Sbjct: 421 QKGLQVVADLVINRMK 436
>UNIPROTKB|E1BZW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:AADN02000555 IPI:IPI00572129
ProteinModelPortal:E1BZW8 Ensembl:ENSGALT00000012224
NextBio:20823389 Uniprot:E1BZW8
Length = 366
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 79/136 (58%), Positives = 108/136 (79%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LG D K+ E+A++YG+N+GIAFQL+DD+LDF S +D +GKP AADLKLGLAT PVLFA
Sbjct: 231 ILGCPDPKVHEIAYQYGKNVGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPVLFA 290
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
C +FPE+N MIMRRF +PGDVE+A ++V +S G++QT +LA+++C EA R S L SP
Sbjct: 291 CRQFPEMNAMIMRRFSKPGDVERARKYVLQSDGVQQTTYLAQRYCHEATREISKLRPSPE 350
Query: 121 QKGLVVLTDLVLNRMK 136
++ L+ LT++VL R K
Sbjct: 351 REALIQLTEMVLMRDK 366
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 78/136 (57%), Positives = 109/136 (80%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LG D + E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLGLAT PVLFA
Sbjct: 275 VLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFA 334
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
C++FPE+N MIMRRF PGDV++A ++V +S G++QT +LA+++C EA+R S L SP
Sbjct: 335 CQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLRPSPE 394
Query: 121 QKGLVVLTDLVLNRMK 136
++ L+ L+++VL R K
Sbjct: 395 REALIQLSEIVLTRDK 410
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 78/136 (57%), Positives = 108/136 (79%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LG D + E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLGLAT PVLFA
Sbjct: 280 VLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFA 339
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
C++FPE+N MIMRRF PGDV++A ++V +S G++QT +LA+++C EA+R S L SP
Sbjct: 340 CQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPE 399
Query: 121 QKGLVVLTDLVLNRMK 136
+ L+ L+++VL R K
Sbjct: 400 RDALIQLSEIVLTRDK 415
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 78/136 (57%), Positives = 108/136 (79%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L +D ++ E+A++YGRN+GIAFQLVDD+LDF S+++ +GKP+AADLKLGLAT PVLFA
Sbjct: 276 ILVNSDPEVHEIAYQYGRNVGIAFQLVDDILDFTSNANCLGKPSAADLKLGLATGPVLFA 335
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
C++FPEL+ MIMRRF GDV++A+++V KS G+EQT +LA+ +C EA+R S L S
Sbjct: 336 CQQFPELHSMIMRRFSSDGDVDRAWQYVLKSDGVEQTNYLAQHYCQEAIRQISRLRPSSE 395
Query: 121 QKGLVVLTDLVLNRMK 136
+ L+ LT+LVL R K
Sbjct: 396 RDALIRLTELVLRRDK 411
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 76/136 (55%), Positives = 107/136 (78%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LG D + E+A++YG+N+GIAFQL+DD+LDF S S+ MGKPT+ADLKLGLAT PVLFA
Sbjct: 283 VLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFA 342
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
C++FPE+N MIMRRF PGDV++A ++V +S G++QT +LA+++C +AV S L SP
Sbjct: 343 CQQFPEMNAMIMRRFGSPGDVDRALQYVLQSDGVQQTTYLAQRYCHKAVSEISKLRPSPE 402
Query: 121 QKGLVVLTDLVLNRMK 136
+ L+ L+++VL R K
Sbjct: 403 RDALIQLSEMVLTRDK 418
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 77/136 (56%), Positives = 107/136 (78%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LG D + E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLGLAT PVLFA
Sbjct: 230 VLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFA 289
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
C++FPE+N MIMRRF PGDV++A ++V +S G++QT +LA+++C EA+R S L S
Sbjct: 290 CQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLRPSAE 349
Query: 121 QKGLVVLTDLVLNRMK 136
+ L+ L+++VL R K
Sbjct: 350 RDALIQLSEIVLTRDK 365
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 75/136 (55%), Positives = 105/136 (77%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LG D + E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLG+AT PVLFA
Sbjct: 274 VLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFA 333
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
C++FPE+N MIMRRF PGDV++A ++V +S G++QT +LA+++C +AVR L S
Sbjct: 334 CQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLRPSTE 393
Query: 121 QKGLVVLTDLVLNRMK 136
+ L+ L++ VL R K
Sbjct: 394 RDALIQLSESVLTRDK 409
>WB|WBGene00000761 [details] [associations]
symbol:coq-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0040011 GO:GO:0040017 GO:GO:0006744 eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 EMBL:FO080645
PIR:G87775 PIR:T25573 RefSeq:NP_491588.1 ProteinModelPortal:P91093
SMR:P91093 STRING:P91093 PaxDb:P91093 EnsemblMetazoa:C24A11.9
GeneID:172190 KEGG:cel:CELE_C24A11.9 UCSC:C24A11.9 CTD:172190
WormBase:C24A11.9 InParanoid:P91093 OMA:PNRNEST NextBio:874409
Uniprot:P91093
Length = 393
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 71/112 (63%), Positives = 90/112 (80%)
Query: 4 GADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 63
G+D KL E+AFEYGRNLGIAFQL DDLLDFI+++D MGKP AADLKLGLATAPVL+ACE+
Sbjct: 260 GSDLKLHEIAFEYGRNLGIAFQLADDLLDFIATADEMGKPVAADLKLGLATAPVLYACEQ 319
Query: 64 FPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGL 115
+PELN M++R+F+ GD EKA E V S G+++T+ L + +AV +AS L
Sbjct: 320 YPELNTMLLRKFKHDGDAEKAREIVVNSDGMDKTRRLIDSYSQKAVEMASSL 371
>UNIPROTKB|I3LJ49 [details] [associations]
symbol:I3LJ49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Ensembl:ENSSSCT00000027318 OMA:NNCISEQ
Uniprot:I3LJ49
Length = 145
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 70/136 (51%), Positives = 100/136 (73%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LG D + E+A++YG+N+GIAFQL+DD+LDF S SD MGK LAT PVLFA
Sbjct: 18 VLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGK--------XLATGPVLFA 69
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
C++FPE+N MIMRRF PGDV++A ++V +S G++QT +LA+++C EA+R S L SP
Sbjct: 70 CQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLRPSPE 129
Query: 121 QKGLVVLTDLVLNRMK 136
++ L+ L+++VL R K
Sbjct: 130 REALIQLSEIVLTRDK 145
>ASPGD|ASPL0000038406 [details] [associations]
symbol:AN10340 species:162425 "Emericella nidulans"
[GO:0032476 "decaprenyl diphosphate synthase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016209 "antioxidant
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019418 "sulfide oxidation" evidence=IEA]
[GO:0070219 "cellular sulfide ion homeostasis" evidence=IEA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001306
GO:GO:0006744 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 ProteinModelPortal:C8VJN5
EnsemblFungi:CADANIAT00010341 OMA:YLHKTYL Uniprot:C8VJN5
Length = 456
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 64/136 (47%), Positives = 94/136 (69%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LG + + E A+ YGRNLG+AFQLVDD+LD+ S +GKP ADL+LGLATAP+LFA
Sbjct: 321 LLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLDYTVSGVELGKPAGADLELGLATAPLLFA 380
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
++ PEL P++ R+F GDVEKA E V+++ G+EQT+ LA+++ +A+ S +S
Sbjct: 381 WKQHPELGPLVGRKFCREGDVEKARELVYRANGVEQTRALAQEYADKAIAAISPFPDSEA 440
Query: 121 QKGLVVLTDLVLNRMK 136
+ GL+ + +NR K
Sbjct: 441 KAGLIEMCRKTMNRRK 456
>CGD|CAL0005672 [details] [associations]
symbol:orf19.7478 species:5476 "Candida albicans" [GO:0032476
"decaprenyl diphosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019418 "sulfide oxidation"
evidence=IEA] [GO:0070219 "cellular sulfide ion homeostasis"
evidence=IEA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IEA]
[GO:0008834 "di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0005672 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
KO:K05355 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000039 RefSeq:XP_718635.1 ProteinModelPortal:Q5AAL1
STRING:Q5AAL1 GeneID:3639664 KEGG:cal:CaO19.7478 Uniprot:Q5AAL1
Length = 510
Score = 322 (118.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 65/134 (48%), Positives = 92/134 (68%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L GA D + E +++GRNLG+ FQ+VDD+LD+ SS +GKP+ ADLKLGLATAP+LFA
Sbjct: 375 VLSGAQDDIIENCYQFGRNLGLCFQIVDDMLDYTSSDKTIGKPSQADLKLGLATAPILFA 434
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
++ P+L +I R+F +PGDVE A V K G+ QTK +A +C +A++ L ES
Sbjct: 435 WKQEPKLGDLIARKFNQPGDVEIARRAVEKYDGVAQTKEMATMYCHQALKNLRVLPESEA 494
Query: 121 QKGLVVLTDLVLNR 134
+ L +LT+ VL R
Sbjct: 495 RSALELLTNSVLTR 508
>DICTYBASE|DDB_G0280293 [details] [associations]
symbol:coq1 "trans-prenyltransferase" species:44689
"Dictyostelium discoideum" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0006743 "ubiquinone metabolic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
dictyBase:DDB_G0280293 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GenomeReviews:CM000152_GR
GO:GO:0046872 EMBL:AAFI02000035 GO:GO:0006744 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0006743 RefSeq:XP_641356.1 HSSP:Q9WY08
ProteinModelPortal:Q54VJ9 STRING:Q54VJ9 EnsemblProtists:DDB0231590
GeneID:8622490 KEGG:ddi:DDB_G0280293 OMA:RIRPTIV Uniprot:Q54VJ9
Length = 456
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 62/136 (45%), Positives = 95/136 (69%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L GAD + ++ E+G+NLG+AFQ+VDDLLD+ S++ GK T+ DL LGLATAPVL+A
Sbjct: 321 ILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECGKATSVDLTLGLATAPVLYA 380
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
++FP+L +I R+F E GDVE+A V S+G+E+T+ LA ++C A++ L +S
Sbjct: 381 TQEFPQLEKLIKRKFSEIGDVEEAKRLVALSKGIEKTRNLAIEYCNRAIQSLLKLPQSES 440
Query: 121 QKGLVVLTDLVLNRMK 136
+ L+ L+ +V+ R K
Sbjct: 441 RDLLITLSHIVVTRTK 456
>SGD|S000000207 [details] [associations]
symbol:COQ1 "Hexaprenyl pyrophosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IMP;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232 SGD:S000000207
GO:GO:0005739 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:BK006936 GO:GO:0006744
EMBL:J05547 EMBL:Z35872 EMBL:AY558099 EMBL:Z26494 PIR:A36625
RefSeq:NP_009557.1 ProteinModelPortal:P18900 SMR:P18900
DIP:DIP-1103N IntAct:P18900 MINT:MINT-427151 STRING:P18900
PaxDb:P18900 PRIDE:P18900 EnsemblFungi:YBR003W GeneID:852288
KEGG:sce:YBR003W CYGD:YBR003w eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 KO:K05355
OMA:RASSIFA OrthoDB:EOG4HB1V2 BioCyc:MetaCyc:MONOMER-13702
BRENDA:2.5.1.33 NextBio:970928 Genevestigator:P18900
GermOnline:YBR003W GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Uniprot:P18900
Length = 473
Score = 308 (113.5 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 65/137 (47%), Positives = 89/137 (64%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L GA + + +++GRNLGI FQLVDD+LDF S +GKP+ ADLKLG+ATAPVLFA
Sbjct: 337 ILSGASPAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFA 396
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVR-LASGLAESP 119
++ P L P+I R F E GDVEK + V G+ +TK LA ++ +A++ L L ES
Sbjct: 397 WKEDPSLGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESD 456
Query: 120 YQKGLVVLTDLVLNRMK 136
+ L LT+ +L R K
Sbjct: 457 ARSALEFLTNSILTRRK 473
>POMBASE|SPBPJ4664.01 [details] [associations]
symbol:dps1 "decaprenyl diphosphate synthase subunit
Dps1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070219 "cellular sulfide ion
homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IMP]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 PomBase:SPBPJ4664.01 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016740 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016209
GO:GO:0019646 GO:GO:0070219 GO:GO:0006119 GO:GO:0019418
GO:GO:0006744 eggNOG:COG0142 HOGENOM:HOG000009104 KO:K05355
OrthoDB:EOG4HB1V2 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0032476 EMBL:D84311 EMBL:D89265 PIR:JC5429
PIR:T43193 RefSeq:NP_595276.1 ProteinModelPortal:O43091
STRING:O43091 EnsemblFungi:SPBPJ4664.01.1 GeneID:2541402
KEGG:spo:SPBPJ4664.01 OMA:KPSVNAL NextBio:20802509 Uniprot:O43091
Length = 378
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 62/136 (45%), Positives = 85/136 (62%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LG ++ A EYGR +G AFQL+DD+LD+ S D +GK ADLKLGLATAPVLFA
Sbjct: 243 ILGQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLATAPVLFA 302
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
+K+PEL MI+ RF P D+++A V + +EQT A+++ +A L +SP
Sbjct: 303 WKKYPELGAMIVNRFNHPSDIQRARSLVECTDAIEQTITWAKEYIKKAKDSLLCLPDSPA 362
Query: 121 QKGLVVLTDLVLNRMK 136
+K L L D V+ R K
Sbjct: 363 RKALFALADKVITRKK 378
>TAIR|locus:2062315 [details] [associations]
symbol:GPS1 "geranyl diphosphate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IGI;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 GO:GO:0009507
EMBL:CP002685 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006744 GO:GO:0009790 EMBL:AC004077
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347 GO:GO:0004659
OMA:KPSVNAL GO:GO:0052924 EMBL:Y17376 EMBL:AY093006 EMBL:BT020524
IPI:IPI00537358 IPI:IPI00538487 IPI:IPI00657038 PIR:A84759
RefSeq:NP_001031483.1 RefSeq:NP_850234.1 UniGene:At.25503 PDB:3APZ
PDB:3AQ0 PDBsum:3APZ PDBsum:3AQ0 ProteinModelPortal:Q5HZ00
SMR:Q5HZ00 STRING:Q5HZ00 PRIDE:Q5HZ00 EnsemblPlants:AT2G34630.2
GeneID:818028 KEGG:ath:AT2G34630 TAIR:At2g34630 InParanoid:Q8RWM1
KO:K14066 ProtClustDB:PLN02890 EvolutionaryTrace:Q9FT89
Genevestigator:Q5HZ00 Uniprot:Q5HZ00
Length = 422
Score = 259 (96.2 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 54/142 (38%), Positives = 93/142 (65%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L G +++ +AFEYGRNLG+AFQL+DD+LDF +S ++GK + +D++ G+ TAP+LFA
Sbjct: 281 VLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFA 340
Query: 61 CEKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPY 120
E+FP+L ++ + ++P +V+ A E++ KS+G+++ + LA +H A L E+
Sbjct: 341 MEEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETDN 400
Query: 121 Q------KGLVVLTDLVLNRMK 136
+ + L+ LT V+ R K
Sbjct: 401 EDVKRSRRALIDLTHRVITRNK 422
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 241 (89.9 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 50/128 (39%), Positives = 81/128 (63%)
Query: 9 LSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELN 68
++E +E+G+NLG++FQ+VDD+LDF S++ +GKP +DL G TAPV+FA E+ P L
Sbjct: 279 VTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALEREPRLR 338
Query: 69 PMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPYQKGLVVLT 128
+I F E G +E+A E V K G+++ + LAR+ +A++ L S ++ L
Sbjct: 339 EIIESEFCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKNLQCLPRSGFRSAL---E 395
Query: 129 DLVLNRMK 136
D+VL ++
Sbjct: 396 DMVLYNLE 403
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 239 (89.2 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 49/130 (37%), Positives = 80/130 (61%)
Query: 6 DDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFP 65
+ K++E +++G+NLG++FQ+VDD+LDF S++ +GKP A DL G TAPV+FA E P
Sbjct: 287 ESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALENEP 346
Query: 66 ELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPYQKGLV 125
L +I F EPG +E+A E V G+++ + LA++ A++ + L S ++ L
Sbjct: 347 RLREIIESEFCEPGSLEEAIEIVRNRGGIKKAQELAKEKAELALKNLNCLPRSGFRSALE 406
Query: 126 VLTDLVLNRM 135
+ L R+
Sbjct: 407 DMVMFNLERI 416
>UNIPROTKB|H0YEE6 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:AL390961 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HGNC:HGNC:17759 Ensembl:ENST00000491711 Uniprot:H0YEE6
Length = 158
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 42/63 (66%), Positives = 54/63 (85%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LG D + E+A++YG+N+GIAFQL+DD+LDF S SD MGKPT+ADLKLGLAT PVLFA
Sbjct: 83 VLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFA 142
Query: 61 CEK 63
C++
Sbjct: 143 CQQ 145
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 195 (73.7 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 46/141 (32%), Positives = 72/141 (51%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPV--- 57
+LG + + E ++G +LGIAFQL+DD LD+ +S + GK DL+ G T P+
Sbjct: 182 ILGTSSAEQQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIHT 241
Query: 58 LFAC--EKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGL 115
L C E+ + ++ + EPGD E F VHK G+E T +A ++
Sbjct: 242 LMKCSDEERETIAAVVEKEILEPGDFESVFTLVHKYGGIEYTVSVANEYIARCKAHLGAF 301
Query: 116 AESPYQKGLVVLTDLVLNRMK 136
+S + L+ L D V+NR +
Sbjct: 302 VDSQEKAALIELADYVVNRKR 322
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 187 (70.9 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 41/136 (30%), Positives = 74/136 (54%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L A E+ YG NLG++FQ+VDD+LDF+ ++ MGKP +DL G T P L
Sbjct: 187 ILADASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNAKDMGKPVGSDLNNGTVTLPALLL 246
Query: 61 CEKFPELNPM--IMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAES 118
+++PE NP+ ++ V +A E ++ S ++ + A+++ A + S L ++
Sbjct: 247 MDRYPENNPIKDMLGATDRSAHVARAVEMINSSDIIDLSYKEAKRYADLACQDLSKLPKT 306
Query: 119 PYQKGLVVLTDLVLNR 134
++ L L + ++ R
Sbjct: 307 AARESLYQLAEFIVER 322
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 173 (66.0 bits), Expect = 9.9e-13, P = 9.9e-13
Identities = 44/138 (31%), Positives = 70/138 (50%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L GA + +YG+ LG AFQL DDLLD+ + SD +GK DL G T P+++A
Sbjct: 192 VLAGASPEQETALGDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIYA 251
Query: 61 CEKFPELNPMIMRRFQEPGD----VEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLA 116
E ++R+ E GD +EK +H L T+ A + +A+ S L
Sbjct: 252 IAHGTEEEKQLIRQAIEQGDGTHAIEKIVAALHHCGALNYTQQKAIEESNKAIAALSVLP 311
Query: 117 ESPYQKGLVVLTDLVLNR 134
+S ++ L+ L + ++R
Sbjct: 312 DSDFKTALISLAKISVDR 329
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 169 (64.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 43/131 (32%), Positives = 68/131 (51%)
Query: 11 EVAFE-YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKF-PELN 68
E+A + YG+ LG AFQL+DD++D+ S D MGK DL G T P+L+A + PE
Sbjct: 218 ELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQA 277
Query: 69 PMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLA---ESPYQKGLV 125
MI ++ + + E + + ++ K EA + + LA ES Y++ L+
Sbjct: 278 AMIREAIEKANGMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAILPESEYKQALI 337
Query: 126 VLTDLVLNRMK 136
L + +NR K
Sbjct: 338 TLAHMAVNRSK 348
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 169 (64.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 43/131 (32%), Positives = 68/131 (51%)
Query: 11 EVAFE-YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKF-PELN 68
E+A + YG+ LG AFQL+DD++D+ S D MGK DL G T P+L+A + PE
Sbjct: 218 ELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLPLLYAMQHGNPEQA 277
Query: 69 PMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLA---ESPYQKGLV 125
MI ++ + + E + + ++ K EA + + LA ES Y++ L+
Sbjct: 278 AMIREAIEKANGMSRLNEILAAMEQTGSLQYTIEKALHEADKAIAELAILPESEYKQALI 337
Query: 126 VLTDLVLNRMK 136
L + +NR K
Sbjct: 338 TLAHMAVNRSK 348
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 162 (62.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 6 DDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFP 65
D K+ + +YG+ LG AFQLVDD++D+ + + MGK DL G T P+L+A +
Sbjct: 193 DAKIEQAMADYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLYAMKHGN 252
Query: 66 ELNPMIMRRFQEPGD----VEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPYQ 121
E +++ E G+ +E + + ++ L T+ A +A++ + +A+S ++
Sbjct: 253 EAQQKLIKEAIELGNGMDNLELILQAMEETGSLRYTQKQAEIEADKAIKALNVIADSEHK 312
Query: 122 KGLVVLTDLVLNR 134
+ L+ L + NR
Sbjct: 313 QALISLAHIAANR 325
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 156 (60.0 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 44/139 (31%), Positives = 70/139 (50%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L G + + +YGR LG AFQL+DDLLD+ + + +GK DL G T P+L A
Sbjct: 184 ILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHA 243
Query: 61 CEK-FPELNPMIMRRFQEPGD----VEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGL 115
PE MI R E G+ +E E ++ LE T+ A + +A+ L
Sbjct: 244 MHHGTPEQAQMI-RTAIEQGNGRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVL 302
Query: 116 AESPYQKGLVVLTDLVLNR 134
++P+++ L+ L + + R
Sbjct: 303 PDTPWREALIGLAHIAVQR 321
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/122 (29%), Positives = 69/122 (56%)
Query: 15 EYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELNPMIMRR 74
++G N GI FQ++DD+LD+ ++ + +GK T D+ G T P++ A E E + + +R
Sbjct: 193 DWGFNFGIVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPLIIAYEGASEKDRIGLRG 252
Query: 75 F--QEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPYQKGLVVLTDLVL 132
+E D + AF ++ +E++ LA+++ A + S +S Y++ L+ L + +
Sbjct: 253 ALSRERPDPDLAFSYIMAQNAIEKSVGLAKEYIAIAEKQLSHFPDSAYKQKLLNLLNSAV 312
Query: 133 NR 134
NR
Sbjct: 313 NR 314
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 153 (58.9 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 36/133 (27%), Positives = 70/133 (52%)
Query: 4 GADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 63
GAD+K+ + + +G +G+++Q++DD+LDF S+ + +GKP DL G T PVL+A K
Sbjct: 215 GADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYAL-K 273
Query: 64 FPEL-NPMIMRRFQEPGD-VEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPYQ 121
P L N + + + + +E E + K+ +E + ++ + +A + + L +
Sbjct: 274 NPALKNQLKLINSETTQEQLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNTLPRGRAR 333
Query: 122 KGLVVLTDLVLNR 134
L + + R
Sbjct: 334 SSLAAIAKYIGKR 346
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 152 (58.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 34/122 (27%), Positives = 64/122 (52%)
Query: 15 EYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFAC--EKFPELNPMIM 72
+YG +G+AFQ++DD+LDF + +GKP +DL+ GL T PVL A +K EL +
Sbjct: 203 QYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRDKKHELWRELQ 262
Query: 73 RRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPYQKGLVVLTDLVL 132
Q ++E+ + + G+ + A+ + +A+ + +SP + + + ++
Sbjct: 263 NLPQNNANIEQIIKEIKYLGGISEAYAWAKNYIEKAISAFELVPKSPVKDTFLEIAQFIV 322
Query: 133 NR 134
R
Sbjct: 323 QR 324
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 152 (58.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 34/122 (27%), Positives = 64/122 (52%)
Query: 15 EYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFAC--EKFPELNPMIM 72
+YG +G+AFQ++DD+LDF + +GKP +DL+ GL T PVL A +K EL +
Sbjct: 203 QYGLYVGMAFQIIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRDKKHELWRELQ 262
Query: 73 RRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPYQKGLVVLTDLVL 132
Q ++E+ + + G+ + A+ + +A+ + +SP + + + ++
Sbjct: 263 NLPQNNANIEQIIKEIKYLGGISEAYAWAKNYIEKAISAFELVPKSPVKDTFLEIAQFIV 322
Query: 133 NR 134
R
Sbjct: 323 QR 324
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 151 (58.2 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
M GA D+ E G +G AFQ+ DD++D S SD GK D++ G+ T P+L+A
Sbjct: 196 MFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYA 255
Query: 61 C-EKFPE---LNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLA 116
E P+ L ++ + +V +A + S G+ + K + ++ +A + L
Sbjct: 256 LRESGPDCARLRALLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLP 315
Query: 117 ESPYQKGLVVLTDLVLNR 134
+ P ++ L L D ++R
Sbjct: 316 DVPGRRALAALVDYTVSR 333
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 149 (57.5 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 2 LGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFAC 61
L ++ E +G N GI+FQ++DD+LD+ +S + GK DL G T PV+ A
Sbjct: 191 LAQTSNEEKEALKNFGNNFGISFQIMDDILDYTASGEQFGKKLGNDLLTGKTTLPVIIAY 250
Query: 62 EKFPELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPYQ 121
+ + ++E+A ++ +E++ +A + +A + AES Y+
Sbjct: 251 QNATSKEKKFWDQISVNPNLEQAISYIKVHNAIEKSISIATTYINQAKSCLNIFAESNYK 310
Query: 122 KGLVVLTDLVLNR 134
L L D +L R
Sbjct: 311 THLNKLLDCILYR 323
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 16 YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELNPMIMRRF 75
+G +LG+A+Q++DDLLD+ + A+ K DL G AT P+++A ++ +R
Sbjct: 209 FGFHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLIYAKQQAQPAQAEHIREA 268
Query: 76 QEPGDVE---KAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAESPYQKGLVVLTDLVL 132
+ GD++ + + +++ E T+ A K +A L SPY+ L LT V+
Sbjct: 269 IKNGDLDDLQSIMKLMDETRAREYTQQCALKQAEKAHTYLQQLPPSPYRDALNALTQFVV 328
Query: 133 NR 134
+R
Sbjct: 329 SR 330
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 140 (54.3 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+ GA + + + + +G +G++FQ+ DD+LDF + + +GKP +DL G T PVL+A
Sbjct: 184 LAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLYA 243
Query: 61 CEKFPELNPMIMRRFQEPGDVEKA--FEFVHKSQGLEQTKFLARKHCVEAVRLASGLAES 118
+ I E E A + ++ +E++ L+ ++ +A+ L GL
Sbjct: 244 LSD-ERVKAAIAAVGPETDVAEMAAVISAIKRTDAIERSYALSDRYLDKALHLLDGL--- 299
Query: 119 PYQKGLVVLTDLVL 132
P + +L DL L
Sbjct: 300 PMNEARGLLRDLAL 313
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 134 (52.2 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 36/116 (31%), Positives = 64/116 (55%)
Query: 4 GAD-DKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 62
GA+ D +S + F YG +G+++Q++DD+LDF+S+ + +GKP DL G T P L+A E
Sbjct: 187 GANRDTVSRL-FWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAME 245
Query: 63 KFPELNPMIMRRFQE---PGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGL 115
P L I R E ++++ E V S +++ + ++ +A+ + L
Sbjct: 246 D-PILCKKI-RSVHENTTADEMKEIIEAVKNSAAIDKAFAFSERYLHKALEMIKPL 299
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 132 (51.5 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 33/94 (35%), Positives = 52/94 (55%)
Query: 15 EYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEKFPELNPMIMRR 74
EYG+NLG+AFQ++DD+LD S +GKP D K G T P ++ E E + + ++
Sbjct: 176 EYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYENLQEQDRIYLQT 235
Query: 75 FQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEA 108
+ E E++ K++ E+ K L K +EA
Sbjct: 236 LFKKDLNENEKEWL-KTK-FEEQKAL-EKAILEA 266
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 131 (51.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 42/137 (30%), Positives = 69/137 (50%)
Query: 4 GADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 63
GA ++ ++ E G N GIAFQ+ DD+L I GKP DL+ G T V++A +K
Sbjct: 183 GAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVKK 242
Query: 64 FP--ELNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGL-AESPY 120
E+ +I + E D+++A + S L+ + AR + A + S + A
Sbjct: 243 AGRREIVDLIGPKASED-DLKRAASIIVDSGALDYAESRARFYVERARDILSRVPAVDAE 301
Query: 121 QKGLV-VLTDLVLNRMK 136
K L+ +L D ++ R+K
Sbjct: 302 SKELLNLLLDYIVERVK 318
>GENEDB_PFALCIPARUM|PFB0130w [details] [associations]
symbol:PFB0130w "polyprenyl synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 134 (52.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 31/109 (28%), Positives = 56/109 (51%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L +D + ++ F G ++G+AFQL DD LD+ D KP DLK + TAP+LF+
Sbjct: 385 ILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDY-KIDDNTNKPILNDLKNNIKTAPLLFS 443
Query: 61 CEKFPE-LNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEA 108
P+ + +I + D+E ++ S +++ + + H +A
Sbjct: 444 YNYNPQVILQLINKNSYTNNDIENILYYIQHSNSMKKNELCSLLHIKKA 492
>UNIPROTKB|O96130 [details] [associations]
symbol:OPP "Octaprenyl pyrophosphate synthase"
species:36329 "Plasmodium falciparum 3D7" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 134 (52.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 31/109 (28%), Positives = 56/109 (51%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L +D + ++ F G ++G+AFQL DD LD+ D KP DLK + TAP+LF+
Sbjct: 385 ILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDY-KIDDNTNKPILNDLKNNIKTAPLLFS 443
Query: 61 CEKFPE-LNPMIMRRFQEPGDVEKAFEFVHKSQGLEQTKFLARKHCVEA 108
P+ + +I + D+E ++ S +++ + + H +A
Sbjct: 444 YNYNPQVILQLINKNSYTNNDIENILYYIQHSNSMKKNELCSLLHIKKA 492
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 129 (50.5 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 35/145 (24%), Positives = 74/145 (51%)
Query: 2 LGGADDKLSEVAF----EYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPV 57
LG +L E + ++G +G+++Q++DD+LD+ S +GKP +D++ G T P+
Sbjct: 181 LGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPL 240
Query: 58 LFACEKFPELNP----MIMRRFQEPGDVEKAFEFVH---KSQGLEQTKFLARKHCVEAVR 110
+ A E + +++ D ++ ++++ K G+E + L+RK+ +A
Sbjct: 241 MAAIANLKEQDDDKLEAVVKHLTSTSD-DEVYQYIVSQVKQYGIEPAELLSRKYGDKAKY 299
Query: 111 LASGLAESPYQKGLVVLTDLVLNRM 135
S L +S + L + + +L R+
Sbjct: 300 HLSQLQDSNIKDYLEEIHEKMLKRV 324
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 125 (49.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 44/136 (32%), Positives = 61/136 (44%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
++ G + FEYG LGIAFQ+ DDLLD+ + A GK D + T PV+ A
Sbjct: 192 VIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKA 251
Query: 61 -CEKFPELNPMIMRRF----QEPGDVEKAFEFVHKSQGLEQTKFLARKHC-VEAVRLASG 114
+ E +R Q GD+E+A + K L T+ A H E R A
Sbjct: 252 VAQATDEERAFWVRTIEKGKQAEGDLEQALALMEKYGTLAATR--ADAHAWAEKARTALE 309
Query: 115 LAESPYQKGLVVLTDL 130
L P + +L+DL
Sbjct: 310 LL--PNHEIRTMLSDL 323
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 125 (49.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 44/136 (32%), Positives = 61/136 (44%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
++ G + FEYG LGIAFQ+ DDLLD+ + A GK D + T PV+ A
Sbjct: 192 VIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKA 251
Query: 61 -CEKFPELNPMIMRRF----QEPGDVEKAFEFVHKSQGLEQTKFLARKHC-VEAVRLASG 114
+ E +R Q GD+E+A + K L T+ A H E R A
Sbjct: 252 VAQATDEERAFWVRTIEKGKQAEGDLEQALALMEKYGTLAATR--ADAHAWAEKARTALE 309
Query: 115 LAESPYQKGLVVLTDL 130
L P + +L+DL
Sbjct: 310 LL--PNHEIRTMLSDL 323
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 125 (49.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 40/139 (28%), Positives = 56/139 (40%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
++ ADD +G LG+AFQ VDDL+ GKP DL AT PV+ A
Sbjct: 213 LVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAA 272
Query: 61 CEKFPELNPMIMRRFQEPG-----DVEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGL 115
E + +Q P DVE+A V + G + A + A+
Sbjct: 273 LNSRSEAATELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAALPDA 332
Query: 116 AESPYQKGLVVLTDLVLNR 134
SP L+ L+ L+ R
Sbjct: 333 VRSP---DLIALSQLICRR 348
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 122 (48.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L GA ++ + +YGR+LG+AFQ+VDDLLD + +GKP +D K T LF
Sbjct: 195 ILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFG 254
Query: 61 CEK 63
E+
Sbjct: 255 IEE 257
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 122 (48.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L GA ++ + +YGR+LG+AFQ+VDDLLD + +GKP +D K T LF
Sbjct: 195 ILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFG 254
Query: 61 CEK 63
E+
Sbjct: 255 IEE 257
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 122 (48.0 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
M GG+D+++ + Y R +G+ FQ+VDD+LD SS+ +GK DL G T P L
Sbjct: 244 MGGGSDEEIERLR-SYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMG 302
Query: 61 CEKFPE 66
EK E
Sbjct: 303 VEKSKE 308
>UNIPROTKB|P0A5H8 [details] [associations]
symbol:MT3506 "(2E,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IDA] [GO:0033386 "geranylgeranyl
diphosphate biosynthetic process" evidence=IDA] [GO:0040007
"growth" evidence=IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00766 GO:GO:0005737
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0005506 GO:GO:0016126
GO:GO:0030145 EMBL:BX842582 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 PIR:C70735 RefSeq:NP_338029.1
RefSeq:YP_006516883.1 RefSeq:YP_177970.1 ProteinModelPortal:P0A5H8
SMR:P0A5H8 EnsemblBacteria:EBMYCT00000003545
EnsemblBacteria:EBMYCT00000069473 GeneID:13317001 GeneID:887919
GeneID:926589 KEGG:mtc:MT3506 KEGG:mtu:Rv3398c KEGG:mtv:RVBD_3398c
PATRIC:18129451 TubercuList:Rv3398c HOGENOM:HOG000009101 KO:K13787
OMA:RMAPLES ProtClustDB:CLSK799990 BioCyc:MetaCyc:MONOMER-15280
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 Uniprot:P0A5H8
Length = 359
Score = 118 (46.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPV 57
+L GA + E YGR++G+AFQLVDDLL + GKP +DL+ T PV
Sbjct: 215 LLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLPV 271
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 116 (45.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 35/136 (25%), Positives = 65/136 (47%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L G+DD+ E YG ++G AFQ+ DDLLD + SD +GK +DL T L A
Sbjct: 207 ILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLTAPSDELGKQRGSDLVENKRTVITLHA 266
Query: 61 CEKFPELNPMIMRRFQEPGD--VEKAFEFVHKSQGLEQTKFLARKHCVEAVRLASGLAES 118
++ ++ ++ +P D +E A + + + ++ + +A L E+
Sbjct: 267 RDQGIDVEGLVS---DDPSDAEIEAAVQTLEDAGSIDFAREMALDLVTSGKERLDVLPEN 323
Query: 119 PYQKGLVVLTDLVLNR 134
++ L + D ++ R
Sbjct: 324 EARQLLEDIADFLVER 339
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 116 (45.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 3 GGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 62
GG+D+++ V ++ R +G+ FQ+VDD+LD SS+ +GK D G T P L E
Sbjct: 278 GGSDEEIESVR-KFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLIGLE 336
Query: 63 KFPE 66
K E
Sbjct: 337 KSKE 340
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 115 (45.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
M GG ++++ ++ +Y R +G+ FQ+VDD+LD S+ +GK D+ G T P L
Sbjct: 257 MGGGTEEEIEKLR-KYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYPRLIG 315
Query: 61 CEKFPELNPMIMRRFQEP--G-DVEKAFEFV 88
E+ E+ + R E G D +KA V
Sbjct: 316 LERSREVAEKLRREAAEQLLGFDSDKAAPLV 346
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 115 (45.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
++GG ++ E +Y R +G+ FQ+VDD+LD S++ +GK D+ G T P L
Sbjct: 259 IMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIG 318
Query: 61 CEKFPELNPMIMRRFQE 77
E E+ + R +E
Sbjct: 319 LEGSREVAEKLRREAEE 335
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 113 (44.8 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
M GG+D+++ + Y R +G+ FQ++DD+LD SS+ +GK DL G T P +
Sbjct: 236 MGGGSDEEIERLK-SYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMG 294
Query: 61 CEKFPELNPMIMRRFQE 77
+ E + R QE
Sbjct: 295 VDNAREYAKRLNREAQE 311
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 113 (44.8 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 3 GGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 62
GG+DD++ + ++ R +G+ FQ+VDD+LD SS +GK DL T P + E
Sbjct: 273 GGSDDEIERLR-KFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLE 331
Query: 63 KFPELNPMIMRRFQE 77
K E + R ++
Sbjct: 332 KSREFAEKLNREARD 346
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 113 (44.8 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
++GG +K E + R +G+ FQ+VDD+LD SS+ +GK D G T P +
Sbjct: 271 VIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIG 330
Query: 61 CEKFPELNPMIMRRFQE 77
EK E + R +E
Sbjct: 331 VEKSKEFVEKLKRDARE 347
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 112 (44.5 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 3 GGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 62
GG ++++ ++ +YGR +G+ FQ+VDD++D S++ +GK D+ T P L E
Sbjct: 262 GGTEEEIQKLR-KYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTYPRLIGLE 320
Query: 63 KFPELNPMIMRRFQE 77
+ E+ + R E
Sbjct: 321 RSREVAEKLRREAAE 335
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 110 (43.8 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LGGA+ + YG +G+AFQ+ DD+LD +++ +GK +D G AT P +
Sbjct: 197 VLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVLG 256
Query: 61 CEKFPELNPMIMRRFQEPGD--VEKAFEFVHKSQGLEQ 96
+ RR QE D +E F H++ L +
Sbjct: 257 LAESK-------RRAQELLDLAIEALSPFDHRADPLRE 287
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 110 (43.8 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LGGA+ + YG +G+AFQ+ DD+LD +++ +GK +D G AT P +
Sbjct: 197 VLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVLG 256
Query: 61 CEKFPELNPMIMRRFQEPGD--VEKAFEFVHKSQGLEQ 96
+ RR QE D +E F H++ L +
Sbjct: 257 LAESK-------RRAQELLDLAIEALSPFDHRADPLRE 287
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 111 (44.1 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+LGG + E + R +G+ FQ+VDD+LD SS+ +GK DL + T P L
Sbjct: 268 ILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLLG 327
Query: 61 CEKFPELNPMIMRRFQE 77
EK E + R ++
Sbjct: 328 LEKAKEFAAELNREAKQ 344
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 109 (43.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 16 YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 62
Y +G+AFQ+ DD+LD IS ++ +GKP +D +L +T P L E
Sbjct: 209 YAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLE 255
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 109 (43.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 16 YGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 62
Y +G+AFQ+ DD+LD IS ++ +GKP +D +L +T P L E
Sbjct: 209 YAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALLGLE 255
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 110 (43.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 3 GGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 62
GG+D+++ ++ + R +G+ FQ+VDD+LD SS+ +GK DL T P L E
Sbjct: 249 GGSDEEVEKLR-RFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLE 307
Query: 63 K 63
K
Sbjct: 308 K 308
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 105 (42.0 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 15 EYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACEK 63
+Y ++G+AFQ+ DD+LD + + +GK AD +LG +T P L E+
Sbjct: 210 KYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQ 258
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 101 (40.6 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 23/89 (25%), Positives = 47/89 (52%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L A ++ E E+ + +G+AFQ+ DD+LD + + +GKP +D+ +T LF
Sbjct: 196 ILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT 255
Query: 61 CEKFPE-LNPMIMRRFQEPGDVEKAFEFV 88
++ + L+ I + G ++ E++
Sbjct: 256 VDRAKDILDETIAKAKDAIGSLQLQDEYL 284
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 101 (40.6 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 23/89 (25%), Positives = 47/89 (52%)
Query: 1 MLGGADDKLSEVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFA 60
+L A ++ E E+ + +G+AFQ+ DD+LD + + +GKP +D+ +T LF
Sbjct: 196 ILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFT 255
Query: 61 CEKFPE-LNPMIMRRFQEPGDVEKAFEFV 88
++ + L+ I + G ++ E++
Sbjct: 256 VDRAKDILDETIAKAKDAIGSLQLQDEYL 284
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 99 (39.9 bits), Expect = 0.00012, P = 0.00012
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 15 EYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 62
EY + +G+A+Q+ DD++D S+ + +GKP +D+ +T P L +
Sbjct: 214 EYAQLIGLAYQVQDDIIDLTSTEEELGKPVGSDIAANKSTYPALLGLQ 261
>TIGR_CMR|SO_1526 [details] [associations]
symbol:SO_1526 "geranyltranstransferase" species:211586
"Shewanella oneidensis MR-1" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
OMA:MEFAHAV KO:K00795 RefSeq:NP_717143.1 ProteinModelPortal:Q8EGR8
GeneID:1169335 KEGG:son:SO_1526 PATRIC:23522694
ProtClustDB:CLSK906310 Uniprot:Q8EGR8
Length = 293
Score = 98 (39.6 bits), Expect = 0.00044, P = 0.00044
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 11 EVAFEYGRNLGIAFQLVDDLLDFISSSDAMGKPTAADLKLGLATAPVLFACE 62
+ E+ +G+AFQ+ DD+LD I++++ +GKP +D + +T P L +
Sbjct: 203 QTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDAESNKSTFPQLLGLQ 254
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 136 136 0.00091 102 3 11 22 0.40 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 536 (57 KB)
Total size of DFA: 112 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.77u 0.06s 12.83t Elapsed: 00:00:06
Total cpu time: 12.78u 0.06s 12.84t Elapsed: 00:00:06
Start: Thu Aug 15 16:03:23 2013 End: Thu Aug 15 16:03:29 2013