BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5539
(653 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/313 (63%), Positives = 246/313 (78%), Gaps = 6/313 (1%)
Query: 337 LSKLPCNASYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFT 396
L +L N Y + LNPKL LE+PRN+I YVRD+G+GAFGRVFQA+APGLL +E FT
Sbjct: 19 LDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFT 78
Query: 397 LVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLN 456
+VAVKMLK+EAS +Q DF+REA L+AEFD+PNIVKLLGVCAVGKPMCLLFEYM GDLN
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 457 DFLRICSPNNYINGTYSSMESSIHRV-----PQLSTCDLITIALQIASGMVYLSDRKFVH 511
+FLR SP+ + ++S + S+ RV P LS + + IA Q+A+GM YLS+RKFVH
Sbjct: 139 EFLRSMSPHTVCSLSHSDL-STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH 197
Query: 512 RDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVES 571
RDLATRNCL+ + MVVKIADFGLSR +Y DYYK D NDAIP+RWMP ESI YN+YT ES
Sbjct: 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTES 257
Query: 572 DVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKP 631
DVWA+GV LWEIFS+ LQPYYG+ HEEV+ Y+++GNIL P+N P LY+LM+LCW+ P
Sbjct: 258 DVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLP 317
Query: 632 MNRPSFRTIYQTL 644
+RPSF +I++ L
Sbjct: 318 ADRPSFCSIHRIL 330
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 131/286 (45%), Positives = 188/286 (65%), Gaps = 8/286 (2%)
Query: 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLA 423
R++I+ R+LG+GAFG+VF A+ L ++ LVAVK LKD AS+ + DF REA LL
Sbjct: 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD-ASDNARKDFHREAELLT 70
Query: 424 EFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
H +IVK GVC G P+ ++FEYM GDLN FLR P+ + + + +
Sbjct: 71 NLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPD-------AVLMAEGNPPT 123
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ ++ IA QIA+GMVYL+ + FVHRDLATRNCL+ + ++VKI DFG+SR +Y DY
Sbjct: 124 ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY 183
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
Y+ + +P+RWMP ESI+Y K+T ESDVW+ GV LWEIF++ QP+Y L++ EV++ I
Sbjct: 184 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECI 243
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
+G +LQ P P +Y+LM CW +P R + + I+ L N+ +
Sbjct: 244 TQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 182/281 (64%), Gaps = 5/281 (1%)
Query: 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLA 423
R DI+ R+LG+GAFG+VF A+ L ++ LVAVK LKD + + DF+REA LL
Sbjct: 14 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD-PTLAARKDFQREAELLT 72
Query: 424 EFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
H +IVK GVC G P+ ++FEYM GDLN FLR P+ I ++
Sbjct: 73 NLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK----G 128
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L ++ IA QIASGMVYL+ + FVHRDLATRNCL+ ++VKI DFG+SR +Y DY
Sbjct: 129 ELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
Y+ + +P+RWMP ESI+Y K+T ESDVW+FGV LWEIF++ QP++ L++ EV++ I
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 248
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+G +L+ P P +YD+M CW +P R + + IY+ L
Sbjct: 249 TQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 177/281 (62%), Gaps = 6/281 (2%)
Query: 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLA 423
R DI+ +LG+GAFG+VF A+ LL ++ LVAVK LK EASE + DF+REA LL
Sbjct: 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLT 98
Query: 424 EFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
H +IV+ GVC G+P+ ++FEYM GDLN FLR P+ + +
Sbjct: 99 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG----- 153
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
L L+ +A Q+A+GMVYL+ FVHRDLATRNCL+ +VVKI DFG+SR +Y DY
Sbjct: 154 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 213
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
Y+ +P+RWMP ESILY K+T ESDVW+FGV LWEIF++ QP+Y L++ E + I
Sbjct: 214 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 273
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+G L+ P P +Y +M+ CW +P R S + ++ L
Sbjct: 274 TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 177/281 (62%), Gaps = 6/281 (2%)
Query: 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLA 423
R DI+ +LG+GAFG+VF A+ LL ++ LVAVK LK EASE + DF+REA LL
Sbjct: 11 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLT 69
Query: 424 EFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
H +IV+ GVC G+P+ ++FEYM GDLN FLR P+ + +
Sbjct: 70 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG----- 124
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
L L+ +A Q+A+GMVYL+ FVHRDLATRNCL+ +VVKI DFG+SR +Y DY
Sbjct: 125 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 184
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
Y+ +P+RWMP ESILY K+T ESDVW+FGV LWEIF++ QP+Y L++ E + I
Sbjct: 185 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 244
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+G L+ P P +Y +M+ CW +P R S + ++ L
Sbjct: 245 TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/281 (46%), Positives = 177/281 (62%), Gaps = 6/281 (2%)
Query: 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLA 423
R DI+ +LG+GAFG+VF A+ LL ++ LVAVK LK EASE + DF+REA LL
Sbjct: 17 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLT 75
Query: 424 EFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
H +IV+ GVC G+P+ ++FEYM GDLN FLR P+ + +
Sbjct: 76 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG----- 130
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
L L+ +A Q+A+GMVYL+ FVHRDLATRNCL+ +VVKI DFG+SR +Y DY
Sbjct: 131 PLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY 190
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
Y+ +P+RWMP ESILY K+T ESDVW+FGV LWEIF++ QP+Y L++ E + I
Sbjct: 191 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 250
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+G L+ P P +Y +M+ CW +P R S + ++ L
Sbjct: 251 TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 182/295 (61%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P ME+
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE---------MEN 121
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ P S +I +A +IA GM YL+ KFVHRDLA RNC++ + VKI DFG++R
Sbjct: 122 NPVLAPP-SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L++LM++CW P RPSF I + IK ++E
Sbjct: 241 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---IKEEME 292
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 182/295 (61%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P ME+
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE---------MEN 121
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ P S +I +A +IA GM YL+ KFVHRDLA RNC++ + VKI DFG++R
Sbjct: 122 NPVLAPP-SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 181 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L++LM++CW P RPSF I + IK ++E
Sbjct: 241 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---IKEEME 292
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 182/295 (61%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P ME+
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE---------MEN 119
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ P S +I +A +IA GM YL+ KFVHRDLA RNC++ + VKI DFG++R
Sbjct: 120 NPVLAPP-SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 238
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L++LM++CW P RPSF I + IK ++E
Sbjct: 239 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---IKEEME 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 182/295 (61%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P ME+
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE---------MEN 115
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ P S +I +A +IA GM YL+ KFVHRDLA RNC++ + VKI DFG++R
Sbjct: 116 NPVLAPP-SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 174
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 175 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L++LM++CW P RPSF I + IK ++E
Sbjct: 235 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---IKEEME 286
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 182/295 (61%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P ME+
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE---------MEN 122
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ P S +I +A +IA GM YL+ KFVHRDLA RNC++ + VKI DFG++R
Sbjct: 123 NPVLAPP-SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 182 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L++LM++CW P RPSF I + IK ++E
Sbjct: 242 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---IKEEME 293
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 182/295 (61%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P ME+
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP---------EMEN 150
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ P S +I +A +IA GM YL+ KFVHRDLA RNC++ + VKI DFG++R
Sbjct: 151 NPVLAPP-SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 210 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 269
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L++LM++CW P RPSF I + IK ++E
Sbjct: 270 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---IKEEME 321
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 182/295 (61%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P ME+
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE---------MEN 128
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ P S +I +A +IA GM YL+ KFVHRDLA RNC++ + VKI DFG++R
Sbjct: 129 NPVLAPP-SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L++LM++CW P RPSF I + IK ++E
Sbjct: 248 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---IKEEME 299
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 181/295 (61%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P N +
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP--- 124
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
P LS +I +A +IA GM YL+ KFVHRDLA RNC++ + VKI DFG++R
Sbjct: 125 -----PSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 178 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 237
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L++LM++CW P RPSF I + IK ++E
Sbjct: 238 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---IKEEME 289
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 181/295 (61%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P N +
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP--- 134
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
P LS +I +A +IA GM YL+ KFVHRDLA RNC++ + VKI DFG++R
Sbjct: 135 -----PSLSK--MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 188 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L++LM++CW P RPSF I + IK ++E
Sbjct: 248 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---IKEEME 299
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 180/295 (61%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P ME+
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE---------MEN 115
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ P S +I +A +IA GM YL+ KFVHRDLA RNC + + VKI DFG++R
Sbjct: 116 NPVLAPP-SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRD 174
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 175 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L +LM++CW P RPSF I + IK ++E
Sbjct: 235 QVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISS---IKEEME 286
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 179/295 (60%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P ME+
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE---------MEN 122
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ P S +I +A +IA GM YL+ KFVHRDLA RNC++ + VKI DFG++R
Sbjct: 123 NPVLAPP-SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+ D + +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 182 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L++LM++CW P RPSF I + IK ++E
Sbjct: 242 QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS---IKEEME 293
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 178/295 (60%), Gaps = 13/295 (4%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I R+LGQG+FG V++ A G++K E T VA+K + + AS + +F
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ EF+ ++V+LLGV + G+P ++ E M RGDL +LR P ME+
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPE---------MEN 113
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ P S +I +A +IA GM YL+ KFVHRDLA RNC++ + VKI DFG++R
Sbjct: 114 NPVLAPP-SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 172
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+ D + +PVRWM ES+ +T SDVW+FGV LWEI + A QPY GL++E
Sbjct: 173 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 232
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
+V++++ EG +L PDN PD L +LM++CW P RPSF I + IK ++E
Sbjct: 233 QVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISS---IKEEME 284
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/284 (41%), Positives = 171/284 (60%), Gaps = 10/284 (3%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E R I +R+LGQG+FG V++ A ++K E T VAVK + + AS + +F EA
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ F ++V+LLGV + G+P ++ E M GDL +LR P E++
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP---------EAENNPG 122
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R P + ++I +A +IA GM YL+ +KFVHRDLA RNC++ VKI DFG++R +Y
Sbjct: 123 RPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
DYY+ +PVRWM ES+ +T SD+W+FGV LWEI S A QPY GL++E+V+
Sbjct: 182 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 241
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
K++ +G L PDN P+ + DLM++CW P RP+F I L
Sbjct: 242 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 173/287 (60%), Gaps = 10/287 (3%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I +R+LGQG+FG V++ A ++K E T VAVK + + AS + +F
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ F ++V+LLGV + G+P ++ E M GDL +LR P E+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE---------AEN 120
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ R P + ++I +A +IA GM YL+ +KFVHRDLA RNC++ VKI DFG++R
Sbjct: 121 NPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SD+W+FGV LWEI S A QPY GL++E
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+V+K++ +G L PDN P+ + DLM++CW P RP+F I L
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 174/284 (61%), Gaps = 4/284 (1%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E + + ++ +LG+ FG+V++ G E+ VA+K LKD+A L+ +F EA
Sbjct: 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 81
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
L A HPN+V LLGV +P+ ++F Y GDL++FL + SP++ + T
Sbjct: 82 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK-- 139
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
L D + + QIA+GM YLS VH+DLATRN L+ D++ VKI+D GL R++Y
Sbjct: 140 --SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
DYYK N +P+RWM E+I+Y K++++SD+W++GV LWE+FS+ LQPY G ++++VV
Sbjct: 198 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 257
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ I+ +L PD+ P +Y LM CWN P RP F+ I+ L
Sbjct: 258 EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 174/284 (61%), Gaps = 4/284 (1%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E + + ++ +LG+ FG+V++ G E+ VA+K LKD+A L+ +F EA
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
L A HPN+V LLGV +P+ ++F Y GDL++FL + SP++ + T
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK-- 122
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
L D + + QIA+GM YLS VH+DLATRN L+ D++ VKI+D GL R++Y
Sbjct: 123 --SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
DYYK N +P+RWM E+I+Y K++++SD+W++GV LWE+FS+ LQPY G ++++VV
Sbjct: 181 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 240
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ I+ +L PD+ P +Y LM CWN P RP F+ I+ L
Sbjct: 241 EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 173/287 (60%), Gaps = 10/287 (3%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I +R+LGQG+FG V++ A ++K E T VAVK + + AS + +F
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 70
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ F ++V+LLGV + G+P ++ E M GDL +LR P E+
Sbjct: 71 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP---------EAEN 121
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ R P + ++I +A +IA GM YL+ +KFVHR+LA RNC++ VKI DFG++R
Sbjct: 122 NPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRD 180
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SD+W+FGV LWEI S A QPY GL++E
Sbjct: 181 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 240
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+V+K++ +G L PDN P+ + DLM++CW P RP+F I L
Sbjct: 241 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 173/287 (60%), Gaps = 10/287 (3%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I +R+LGQG+FG V++ A ++K E T VAVK + + AS + +F
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ F ++V+LLGV + G+P ++ E M GDL +LR P E+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP---------EAEN 120
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ R P + ++I +A +IA GM YL+ +KFVHR+LA RNC++ VKI DFG++R
Sbjct: 121 NPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y DYY+ +PVRWM ES+ +T SD+W+FGV LWEI S A QPY GL++E
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+V+K++ +G L PDN P+ + DLM++CW P RP+F I L
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 172/287 (59%), Gaps = 10/287 (3%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I +R+LGQG+FG V++ A ++K E T VAVK + + AS + +F
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ F ++V+LLGV + G+P ++ E M GDL +LR P E+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE---------AEN 120
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ R P + ++I +A +IA GM YL+ +KFVHRDLA RNC++ VKI DFG++R
Sbjct: 121 NPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PVRWM ES+ +T SD+W+FGV LWEI S A QPY GL++E
Sbjct: 180 IYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+V+K++ +G L PDN P+ + DLM++CW P RP+F I L
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 170/287 (59%), Gaps = 10/287 (3%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I +R+LGQG+FG V++ A ++K E T VAVK + + AS + +F
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 66
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ F ++V+LLGV + G+P ++ E M GDL +LR P E+
Sbjct: 67 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE---------AEN 117
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ R P + ++I +A +IA GM YL+ +KFVHRDLA RNC++ VKI DFG++R
Sbjct: 118 NPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 176
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+ D + +PVRWM ES+ +T SD+W+FGV LWEI S A QPY GL++E
Sbjct: 177 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 236
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+V+K++ +G L PDN P+ + DLM++CW P RP+F I L
Sbjct: 237 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 170/287 (59%), Gaps = 10/287 (3%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I +R+LGQG+FG V++ A ++K E T VAVK + + AS + +F
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ F ++V+LLGV + G+P ++ E M GDL +LR P E+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE---------AEN 120
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ R P + ++I +A +IA GM YL+ +KFVHRDLA RNC++ VKI DFG++R
Sbjct: 121 NPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+ D + +PVRWM ES+ +T SD+W+FGV LWEI S A QPY GL++E
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+V+K++ +G L PDN P+ + DLM++CW P RP+F I L
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 170/287 (59%), Gaps = 10/287 (3%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E R I +R+LGQG+FG V++ A ++K E T VAVK + + AS + +F
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA ++ F ++V+LLGV + G+P ++ E M GDL +LR P E+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRP---------EAEN 120
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+ R P + ++I +A +IA GM YL+ +KFVHRDLA RNC++ VKI DFG++R
Sbjct: 121 NPGRPPP-TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+ D + +PVRWM ES+ +T SD+W+FGV LWEI S A QPY GL++E
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+V+K++ +G L PDN P+ + DLM++CW P RP+F I L
Sbjct: 240 QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 181/300 (60%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+GAFG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 25 PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 84
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++LR P
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP------- 137
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 138 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 196
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + DYYK N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 197 KIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 179/296 (60%), Gaps = 7/296 (2%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + E PR+ ++ + LG+GAFG+V A+A GL K + T VAVKMLK +A+E
Sbjct: 10 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL 69
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++L+ P G
Sbjct: 70 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP----GL 125
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
S S + QLS+ DL++ A Q+A GM YL+ +K +HRDLA RN L+ + V+KIAD
Sbjct: 126 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD 185
Query: 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
FGL+R ++ DYYK N +PV+WM E++ YT +SDVW+FGV LWEIF+ PY
Sbjct: 186 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
Query: 592 YGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 246 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 179/296 (60%), Gaps = 7/296 (2%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + E PR+ ++ + LG+GAFG+V A+A GL K + T VAVKMLK +A+E
Sbjct: 18 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL 77
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++L+ P G
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPP----GL 133
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
S S + QLS+ DL++ A Q+A GM YL+ +K +HRDLA RN L+ + V+KIAD
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
FGL+R ++ DYYK N +PV+WM E++ YT +SDVW+FGV LWEIF+ PY
Sbjct: 194 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 592 YGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 179/296 (60%), Gaps = 7/296 (2%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + E PR+ ++ + LG+GAFG+V A+A GL K + T VAVKMLK +A+E
Sbjct: 11 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL 70
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++L+ P G
Sbjct: 71 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP----GL 126
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
S S + QLS+ DL++ A Q+A GM YL+ +K +HRDLA RN L+ + V+KIAD
Sbjct: 127 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD 186
Query: 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
FGL+R ++ DYYK N +PV+WM E++ YT +SDVW+FGV LWEIF+ PY
Sbjct: 187 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
Query: 592 YGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 247 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 179/296 (60%), Gaps = 7/296 (2%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + E PR+ ++ + LG+GAFG+V A+A GL K + T VAVKMLK +A+E
Sbjct: 18 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL 77
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++L+ P G
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP----GL 133
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
S S + QLS+ DL++ A Q+A GM YL+ +K +HRDLA RN L+ + V+KIAD
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
FGL+R ++ DYYK N +PV+WM E++ YT +SDVW+FGV LWEIF+ PY
Sbjct: 194 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 592 YGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 181/300 (60%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+GAFG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 25 PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDL 84
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++LR P
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP------- 137
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 138 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 196
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + DYYK N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 181/300 (60%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+GAFG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 25 PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 84
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++LR P
Sbjct: 85 SDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRP------- 137
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 138 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 196
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + DYYK N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 179/296 (60%), Gaps = 7/296 (2%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + E PR+ ++ + LG+GAFG+V A+A GL K + T VAVKMLK +A+E
Sbjct: 59 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL 118
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++L+ P G
Sbjct: 119 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP----GL 174
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
S S + QLS+ DL++ A Q+A GM YL+ +K +HRDLA RN L+ + V+KIAD
Sbjct: 175 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD 234
Query: 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
FGL+R ++ DYYK N +PV+WM E++ YT +SDVW+FGV LWEIF+ PY
Sbjct: 235 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
Query: 592 YGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 295 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 179/296 (60%), Gaps = 7/296 (2%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + E PR+ ++ + LG+GAFG+V A+A GL K + T VAVKMLK +A+E
Sbjct: 7 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL 66
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++L+ P G
Sbjct: 67 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP----GL 122
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
S S + QLS+ DL++ A Q+A GM YL+ +K +HRDLA RN L+ + V+KIAD
Sbjct: 123 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD 182
Query: 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
FGL+R ++ DYYK N +PV+WM E++ YT +SDVW+FGV LWEIF+ PY
Sbjct: 183 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
Query: 592 YGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 243 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 181/300 (60%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+GAFG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 25 PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 84
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++LR P
Sbjct: 85 SDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRP------- 137
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 138 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 196
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + DYYK N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 181/300 (60%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+GAFG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 25 PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 84
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++LR P
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP------- 137
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 138 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 196
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
+IADFGL+R + DYYK N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 197 RIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+G FG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 71 PEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 130
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++LR P
Sbjct: 131 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP------- 183
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 184 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 242
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + DYYK N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 303 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+GAFG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 25 PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 84
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ Y +G+L ++LR P
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRP------- 137
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 138 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 196
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + DYYK N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+G FG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 17 PEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 76
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++LR P
Sbjct: 77 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP------- 129
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 130 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 188
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + DYYK N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 189 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 248
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 249 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+G FG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 14 PEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 73
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++LR P
Sbjct: 74 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP------- 126
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 127 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 185
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + DYYK N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 186 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 245
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 246 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 178/296 (60%), Gaps = 7/296 (2%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + E PR+ ++ + LG+GAFG+V A+A GL K + T VAVKMLK +A+E
Sbjct: 3 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL 62
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++L+ P G
Sbjct: 63 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP----GL 118
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
S + QLS+ DL++ A Q+A GM YL+ +K +HRDLA RN L+ + V+KIAD
Sbjct: 119 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD 178
Query: 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
FGL+R ++ DYYK N +PV+WM E++ YT +SDVW+FGV LWEIF+ PY
Sbjct: 179 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
Query: 592 YGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 239 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+GAFG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 25 PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 84
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ Y +G+L ++LR P
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRP------- 137
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 138 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 196
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + DYYK N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 178/296 (60%), Gaps = 7/296 (2%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + E PR+ ++ + LG+GAFG+V A+A GL K + T VAVKMLK +A+E
Sbjct: 18 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL 77
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++L+ P G
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP----GL 133
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
S + QLS+ DL++ A Q+A GM YL+ +K +HRDLA RN L+ + V+KIAD
Sbjct: 134 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
FGL+R ++ DYYK N +PV+WM E++ YT +SDVW+FGV LWEIF+ PY
Sbjct: 194 FGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 592 YGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 179/300 (59%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+G FG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 12 PEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 71
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++LR P
Sbjct: 72 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP------- 124
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDL RN L+ + V+
Sbjct: 125 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVM 183
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + DYYK N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 184 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 243
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 244 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 179/300 (59%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+GAFG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 25 PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 84
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++LR P
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP------- 137
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 138 -PGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 196
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + D K N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 177/296 (59%), Gaps = 7/296 (2%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + E PR+ ++ + LG+GAFG+V A+A GL K + T VAVKMLK +A+E
Sbjct: 18 PEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL 77
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++L+ P G
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP----GL 133
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
S S + QLS+ DL++ A Q+A GM YL+ +K +HRDLA RN L+ + V+KIAD
Sbjct: 134 EFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD 193
Query: 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
FGL+R ++ D K N +PV+WM E++ YT +SDVW+FGV LWEIF+ PY
Sbjct: 194 FGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 592 YGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 179/300 (59%), Gaps = 15/300 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQ 412
P+ + EFPR+ + + LG+GAFG+V A+A G+ K + E VAVKMLKD+A+E
Sbjct: 25 PEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDL 84
Query: 413 TDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+D E ++ H NI+ LLG C P+ ++ EY +G+L ++LR P
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP------- 137
Query: 472 YSSMESS--IHRVP--QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
ME S I+RVP Q++ DL++ Q+A GM YL+ +K +HRDLA RN L+ + V+
Sbjct: 138 -PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 196
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KIADFGL+R + D K N +PV+WM E++ YT +SDVW+FGV +WEIF+
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE+ K +KEG+ + P N + LY +M+ CW+ P RP+F+ + + L I
Sbjct: 257 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 166/288 (57%), Gaps = 4/288 (1%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
EFPR +++ + LG+G FG+V +A A L +T VAVKMLK+ AS D E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSP--NNYINGTYSSMESS 478
+L + +HP+++KL G C+ P+ L+ EY G L FLR Y+ S SS
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 479 IHRVPQ--LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+ + L+ DLI+ A QI+ GM YL++ K VHRDLA RN L+ + +KI+DFGLSR
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+Y +D Y IPV+WM +ES+ + YT +SDVW+FGV LWEI + PY G+
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
E + +K G+ ++ PDN + +Y LM CW +P RP F I + L
Sbjct: 259 ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 167/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 54
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-------- 106
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
++S L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 107 ----------EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 156
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 157 LSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 216 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 169/298 (56%), Gaps = 6/298 (2%)
Query: 345 SYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK 404
SY D P E+ EFPRN++ + + LG GAFG+V +A A GL K + VAVKMLK
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 405 DEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS 463
A + E +++ H NIV LLG C G P+ ++ EY GDL +FLR
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKR 145
Query: 464 PNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523
P G S S + QLS+ DL+ + Q+A GM +L+ + +HRD+A RN L+ +
Sbjct: 146 PP----GLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 201
Query: 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
V KI DFGL+R + Y N +PV+WM ESI YTV+SDVW++G+ LWEI
Sbjct: 202 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
Query: 584 FSFALQPYYG-LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
FS L PY G L + + K +K+G + P P +Y +M+ CW ++P +RP+F+ I
Sbjct: 262 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 167/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 54
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-------- 106
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
++S L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 107 ----------EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 156
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 157 LSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 216 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 167/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 7 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 59
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-------- 111
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
++S L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 112 ----------EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 162 LSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 221 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 168/292 (57%), Gaps = 26/292 (8%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
++P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 208 VSPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV-- 260
Query: 413 TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 261 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------- 313
Query: 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADF 532
++S L+ +A QI+S M YL + F+HR+LA RNCL+ + +VK+ADF
Sbjct: 314 -----------EVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF 362
Query: 533 GLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY 592
GLSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY
Sbjct: 363 GLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 421
Query: 593 GLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
G+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 422 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 473
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 165/288 (57%), Gaps = 4/288 (1%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
EFPR +++ + LG+G FG+V +A A L +T VAVKMLK+ AS D E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSP--NNYINGTYSSMESS 478
+L + +HP+++KL G C+ P+ L+ EY G L FLR Y+ S SS
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 479 IHRVPQ--LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+ + L+ DLI+ A QI+ GM YL++ K VHRDLA RN L+ + +KI+DFGLSR
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+Y +D IPV+WM +ES+ + YT +SDVW+FGV LWEI + PY G+
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
E + +K G+ ++ PDN + +Y LM CW +P RP F I + L
Sbjct: 259 ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 167/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 54
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-------- 106
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
++S L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 107 ----------EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 156
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 157 LSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 216 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 167/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 54
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 55 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-------- 106
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
++S L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 107 ----------EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 156
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 157 LSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 216 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 168/294 (57%), Gaps = 26/294 (8%)
Query: 351 ARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY 410
++P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 1 GHMSPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV 55
Query: 411 LQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYING 470
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 56 --EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ----- 108
Query: 471 TYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+A
Sbjct: 109 -------------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 155
Query: 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQP 590
DFGLSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + P
Sbjct: 156 DFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
Query: 591 YYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
Y G+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 215 YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 268
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 168/292 (57%), Gaps = 26/292 (8%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
++P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 3 MDPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV-- 55
Query: 413 TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------- 108
Query: 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADF 532
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADF
Sbjct: 109 -----------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF 157
Query: 533 GLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY 592
GLSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY
Sbjct: 158 GLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 216
Query: 593 GLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
G+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 217 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 268
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 168/294 (57%), Gaps = 26/294 (8%)
Query: 351 ARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY 410
++P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 1 GHMSPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV 55
Query: 411 LQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYING 470
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 56 --EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ----- 108
Query: 471 TYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+A
Sbjct: 109 -------------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 155
Query: 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQP 590
DFGLSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + P
Sbjct: 156 DFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
Query: 591 YYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
Y G+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 215 YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 268
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 167/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 7 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 59
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-------- 111
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 112 ----------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 162 LSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 221 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 168/292 (57%), Gaps = 26/292 (8%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
++P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 1 VSPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV-- 53
Query: 413 TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------- 106
Query: 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADF 532
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADF
Sbjct: 107 -----------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 533 GLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY 592
GLSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY
Sbjct: 156 GLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 214
Query: 593 GLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
G+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 168/292 (57%), Gaps = 26/292 (8%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
++P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 2 MSPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV-- 54
Query: 413 TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------- 107
Query: 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADF 532
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADF
Sbjct: 108 -----------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF 156
Query: 533 GLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY 592
GLSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY
Sbjct: 157 GLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 215
Query: 593 GLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
G+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 216 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 167/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 7 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 59
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-------- 111
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 112 ----------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 162 LSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 221 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 168/292 (57%), Gaps = 26/292 (8%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
++P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 205 VSPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV-- 257
Query: 413 TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 258 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------- 310
Query: 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADF 532
+++ L+ +A QI+S M YL + F+HR+LA RNCL+ + +VK+ADF
Sbjct: 311 -----------EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF 359
Query: 533 GLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY 592
GLSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY
Sbjct: 360 GLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 418
Query: 593 GLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
G+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 419 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 470
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 168/292 (57%), Gaps = 26/292 (8%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
++P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 1 VSPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV-- 53
Query: 413 TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------- 106
Query: 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADF 532
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADF
Sbjct: 107 -----------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF 155
Query: 533 GLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY 592
GLSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY
Sbjct: 156 GLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 214
Query: 593 GLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
G+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 215 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 167/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 7 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 59
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-------- 111
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 112 ----------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 162 LSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 221 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 167/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 6 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 58
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 59 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-------- 110
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 111 ----------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 160
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 161 LSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 219
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 220 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/288 (39%), Positives = 164/288 (56%), Gaps = 4/288 (1%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
EFPR +++ + LG+G FG+V +A A L +T VAVKMLK+ AS D E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSP--NNYINGTYSSMESS 478
+L + +HP+++KL G C+ P+ L+ EY G L FLR Y+ S SS
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 479 IHRVPQ--LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+ + L+ DLI+ A QI+ GM YL++ VHRDLA RN L+ + +KI+DFGLSR
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+Y +D IPV+WM +ES+ + YT +SDVW+FGV LWEI + PY G+
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
E + +K G+ ++ PDN + +Y LM CW +P RP F I + L
Sbjct: 259 ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 167/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 15 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 67
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 68 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-------- 119
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 120 ----------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 169
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 170 LSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 228
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 229 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 279
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 168/292 (57%), Gaps = 26/292 (8%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
++P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 247 VSPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV-- 299
Query: 413 TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------- 352
Query: 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADF 532
+++ L+ +A QI+S M YL + F+HR+LA RNCL+ + +VK+ADF
Sbjct: 353 -----------EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF 401
Query: 533 GLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY 592
GLSR M D Y P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY
Sbjct: 402 GLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP 460
Query: 593 GLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
G+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 461 GIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 512
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 172/307 (56%), Gaps = 33/307 (10%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEE--FTLVAVKMLKDE--AS 408
L KLE + P R LG+G FG V +A+ LK E+ F VAVKMLK + AS
Sbjct: 11 LKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQ----LKQEDGSFVKVAVKMLKADIIAS 66
Query: 409 EYLQTDFEREACLLAEFDHPNIVKLLGVC----AVGK---PMCLLFEYMGRGDLNDFLRI 461
++ +F REA + EFDHP++ KL+GV A G+ PM +L +M GDL+ FL
Sbjct: 67 SDIE-EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVIL-PFMKHGDLHAFL-- 122
Query: 462 CSPNNYINGTYSSMESSIHRVP-QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520
+ S I P L L+ + IA GM YLS R F+HRDLA RNC+
Sbjct: 123 -------------LASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCM 169
Query: 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCL 580
+ + M V +ADFGLSRK+Y DYY+ +PV+W+ LES+ N YTV SDVWAFGV +
Sbjct: 170 LAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTM 229
Query: 581 WEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
WEI + PY G+ + E+ Y+ GN L+ P + +YDLM CW+ P RPSF +
Sbjct: 230 WEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCL 289
Query: 641 YQTLWNI 647
L NI
Sbjct: 290 RMELENI 296
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 169/298 (56%), Gaps = 8/298 (2%)
Query: 345 SYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK 404
SY D P E+ EFPRN++ + + LG GAFG+V +A A GL K + VAVKMLK
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 405 DEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS 463
A + E +++ H NIV LLG C G P+ ++ EY GDL +FLR S
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
Query: 464 PNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523
+ ++ S+ LST DL+ + Q+A GM +L+ + +HRD+A RN L+ +
Sbjct: 146 RVLETDPAFAIANST------LSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 199
Query: 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
V KI DFGL+R + Y N +PV+WM ESI YTV+SDVW++G+ LWEI
Sbjct: 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
Query: 584 FSFALQPYYG-LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
FS L PY G L + + K +K+G + P P +Y +M+ CW ++P +RP+F+ I
Sbjct: 260 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 166/288 (57%), Gaps = 26/288 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE 416
L++ E R DI LG G +G V++ G+ K T VAVK LK++ E +F
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--EEFL 55
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
+EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ----------- 104
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
++S L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFGLSR
Sbjct: 105 -------EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
M D + P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G+
Sbjct: 158 LM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP 216
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 217 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 264
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 165/288 (57%), Gaps = 26/288 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE 416
L++ E R DI LG G FG V++ G+ K T VAVK LK++ E +F
Sbjct: 3 LDKWEMERTDITMKHKLGGGQFGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--EEFL 55
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
+EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ----------- 104
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
++S L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFGLSR
Sbjct: 105 -------EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
M D P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G+
Sbjct: 158 LM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP 216
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 217 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 264
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 128
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 129 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 184
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 185 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 244
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 245 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 297
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 176/297 (59%), Gaps = 28/297 (9%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFT--LVAVKMLK-DEASE 409
L KLE + RN +I + LG+G FG V + G LK E+ T VAVK +K D +S+
Sbjct: 22 LQNKLEDVVIDRNLLILGKILGEGEFGSVME----GNLKQEDGTSLKVAVKTMKLDNSSQ 77
Query: 410 YLQTDFEREACLLAEFDHPNIVKLLGVC------AVGKPMCLLFEYMGRGDLNDFLRICS 463
+F EA + +F HPN+++LLGVC + KPM +L +M GDL+ +L
Sbjct: 78 REIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVIL-PFMKYGDLHTYL---- 132
Query: 464 PNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523
YS +E+ +P L T L+ + IA GM YLS+R F+HRDLA RNC++ D
Sbjct: 133 -------LYSRLETGPKHIP-LQT--LLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRD 182
Query: 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
M V +ADFGLS+K+Y DYY+ +PV+W+ +ES+ YT +SDVWAFGV +WEI
Sbjct: 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
Query: 584 FSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
+ + PY G+ + E+ Y+ G+ L+ P++ D LY++M CW P++RP+F +
Sbjct: 243 ATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVL 299
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 153
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN---DQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 154 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 209
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 210 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 269
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 270 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 322
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 163
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN---DQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 164 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 219
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 220 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 279
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 280 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 332
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 165/288 (57%), Gaps = 26/288 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE 416
L++ E R DI LG G +G V++ G+ K T VAVK LK++ E +F
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--EEFL 55
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
+EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ----------- 104
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
++S L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFGLSR
Sbjct: 105 -------EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR 157
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
M D P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G+
Sbjct: 158 LM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDP 216
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 217 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 264
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 165/294 (56%), Gaps = 26/294 (8%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE 416
+++ E R DI LG G +G V+ G+ K T VAVK LK++ E +F
Sbjct: 24 MDKWEMERTDITMKHKLGGGQYGEVYV----GVWKKYSLT-VAVKTLKEDTMEV--EEFL 76
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
+EA ++ E HPN+V+LLGVC + P ++ EYM G+L D+LR C+
Sbjct: 77 KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE----------- 125
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + VVK+ADFGLSR
Sbjct: 126 -------EVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSR 178
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
M D Y P++W ES+ YN ++++SDVWAFGV LWEI ++ + PY G+
Sbjct: 179 LM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL 237
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
+V +++G ++ P+ P +Y+LM+ CW P +RPSF +Q + D
Sbjct: 238 SQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFHD 291
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 136
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 137 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 252
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 253 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 154
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 155 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 210
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 211 IYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 270
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 271 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 323
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 137
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN---DQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 138 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 193
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 253
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 177
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 178 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 234 IYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 293
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 294 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 143
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN---DQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 144 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 199
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 200 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 259
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 260 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 312
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR-------PSQPSS-- 136
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 137 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 193 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 252
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 253 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR-------PSQPSS-- 151
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 152 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 267
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 166/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 3 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 55
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 56 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-------- 107
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 108 ----------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 157
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 158 LSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 216
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 217 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 267
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 151
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 152 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 267
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 168/298 (56%), Gaps = 8/298 (2%)
Query: 345 SYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK 404
SY D P E+ EFPRN++ + + LG GAFG+V +A A GL K + VAVKMLK
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 405 DEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS 463
A + E +++ H NIV LLG C G P+ ++ EY GDL +FLR S
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
Query: 464 PNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523
+ ++ S+ ST DL+ + Q+A GM +L+ + +HRD+A RN L+ +
Sbjct: 146 RVLETDPAFAIANSTA------STRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 199
Query: 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
V KI DFGL+R + Y N +PV+WM ESI YTV+SDVW++G+ LWEI
Sbjct: 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
Query: 584 FSFALQPYYG-LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
FS L PY G L + + K +K+G + P P +Y +M+ CW ++P +RP+F+ I
Sbjct: 260 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 166/291 (57%), Gaps = 26/291 (8%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+P ++ E R DI LG G +G V++ G+ K T VAVK LK++ E
Sbjct: 7 SPNYDKWEMERTDITMKHKLGGGQYGEVYE----GVWKKYSLT-VAVKTLKEDTMEV--E 59
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F +EA ++ E HPN+V+LLGVC P ++ E+M G+L D+LR C+
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-------- 111
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
+++ L+ +A QI+S M YL + F+HRDLA RNCL+ + +VK+ADFG
Sbjct: 112 ----------EVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR M D P++W ES+ YNK++++SDVWAFGV LWEI ++ + PY G
Sbjct: 162 LSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +V + +++ ++ P+ P+ +Y+LM+ CW P +RPSF I+Q
Sbjct: 221 IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 160/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++F+H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 137
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN---DQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG+++
Sbjct: 138 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQD 193
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 253
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 159/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++ +H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 151
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 152 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 208 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 267
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 159/293 (54%), Gaps = 16/293 (5%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR +I +R LG GAFG V++ + G+ VAVK L + SE + DF EA
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++++ +H NIV+ +GV P +L E M GDL FLR P S SS
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR-------PSQPSS-- 137
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN---DQMVVKIADFGLSRK 537
L+ DL+ +A IA G YL + F+HRD+A RNCL+ V KI DFG++R
Sbjct: 138 ----LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 193
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+Y YY+ +PV+WMP E+ + +T ++D W+FGV LWEIFS PY +++
Sbjct: 194 IYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ 253
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV++++ G + P N P +Y +M CW +P +RP+F I + + +D
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 168/303 (55%), Gaps = 9/303 (2%)
Query: 345 SYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK 404
SY D P E+ EFPRN++ + + LG GAFG+V +A A GL K + VAVKMLK
Sbjct: 11 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 70
Query: 405 DEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLR--- 460
A + E +++ H NIV LLG C G P+ ++ EY GDL +FLR
Sbjct: 71 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA 130
Query: 461 --ICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518
+ P+ ++ R +L DL+ + Q+A GM +L+ + +HRD+A RN
Sbjct: 131 EAMLGPSLAPGQDPEGLDKEDGRPLELR--DLLHFSSQVAQGMAFLASKNCIHRDVAARN 188
Query: 519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGV 578
L+ + V KI DFGL+R + Y N +PV+WM ESI YTV+SDVW++G+
Sbjct: 189 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 248
Query: 579 CLWEIFSFALQPYYG-LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
LWEIFS L PY G L + + K +K+G + P P +Y +M+ CW ++P +RP+F
Sbjct: 249 LLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF 308
Query: 638 RTI 640
+ I
Sbjct: 309 QQI 311
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 166/298 (55%), Gaps = 12/298 (4%)
Query: 345 SYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK 404
SY D P E+ EFPRN++ + + LG GAFG+V +A A GL K + VAVKMLK
Sbjct: 18 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 77
Query: 405 DEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS 463
A + E +++ H NIV LLG C G P+ ++ EY GDL +FLR
Sbjct: 78 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR--- 134
Query: 464 PNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523
+ ++ R +L DL+ + Q+A GM +L+ + +HRD+A RN L+ +
Sbjct: 135 -----RKAEADLDKEDGRPLELR--DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 187
Query: 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
V KI DFGL+R + Y N +PV+WM ESI YTV+SDVW++G+ LWEI
Sbjct: 188 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
Query: 584 FSFALQPYYG-LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
FS L PY G L + + K +K+G + P P +Y +M+ CW ++P +RP+F+ I
Sbjct: 248 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 166/298 (55%), Gaps = 12/298 (4%)
Query: 345 SYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK 404
SY D P E+ EFPRN++ + + LG GAFG+V +A A GL K + VAVKMLK
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85
Query: 405 DEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS 463
A + E +++ H NIV LLG C G P+ ++ EY GDL +FLR
Sbjct: 86 STAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR--- 142
Query: 464 PNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523
+ ++ R +L DL+ + Q+A GM +L+ + +HRD+A RN L+ +
Sbjct: 143 -----RKAEADLDKEDGRPLELR--DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 195
Query: 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
V KI DFGL+R + Y N +PV+WM ESI YTV+SDVW++G+ LWEI
Sbjct: 196 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
Query: 584 FSFALQPYYG-LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
FS L PY G L + + K +K+G + P P +Y +M+ CW ++P +RP+F+ I
Sbjct: 256 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 168/308 (54%), Gaps = 16/308 (5%)
Query: 345 SYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK 404
+Y D P + EFPRN + + + LG GAFG+V +A A GL+K + VAVKMLK
Sbjct: 26 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 405 DEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLR--- 460
A + E +L+ +H NIV LLG C +G P ++ EY GDL +FLR
Sbjct: 86 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 461 ---ICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517
ICS +S L DL++ + Q+A GM +L+ + +HRDLA R
Sbjct: 146 DSFICSK--------TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 197
Query: 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFG 577
N L+ + KI DFGL+R + Y N +PV+WM ESI YT ESDVW++G
Sbjct: 198 NILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG 257
Query: 578 VCLWEIFSFALQPYYGL-THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS 636
+ LWE+FS PY G+ + K IKEG + +P++ P +YD+MK CW+ P+ RP+
Sbjct: 258 IFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT 317
Query: 637 FRTIYQTL 644
F+ I Q +
Sbjct: 318 FKQIVQLI 325
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 165/298 (55%), Gaps = 16/298 (5%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD 414
P + EFPRN + + + LG GAFG+V +A A GL+K + VAVKMLK A +
Sbjct: 29 PYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREA 88
Query: 415 FEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLR------ICSPNNY 467
E +L+ +H NIV LLG C +G P ++ EY GDL +FLR ICS
Sbjct: 89 LMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSK--- 145
Query: 468 INGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
+S L DL++ + Q+A GM +L+ + +HRDLA RN L+ +
Sbjct: 146 -----TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT 200
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
KI DFGL+R + Y N +PV+WM ESI YT ESDVW++G+ LWE+FS
Sbjct: 201 KICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 260
Query: 588 LQPYYGL-THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
PY G+ + K IKEG + +P++ P +YD+MK CW+ P+ RP+F+ I Q +
Sbjct: 261 SSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 318
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 168/308 (54%), Gaps = 16/308 (5%)
Query: 345 SYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK 404
+Y D P + EFPRN + + + LG GAFG+V +A A GL+K + VAVKMLK
Sbjct: 3 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 62
Query: 405 DEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLR--- 460
A + E +L+ +H NIV LLG C +G P ++ EY GDL +FLR
Sbjct: 63 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 122
Query: 461 ---ICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517
ICS +S L DL++ + Q+A GM +L+ + +HRDLA R
Sbjct: 123 DSFICSK--------TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 174
Query: 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFG 577
N L+ + KI DFGL+R + Y N +PV+WM ESI YT ESDVW++G
Sbjct: 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG 234
Query: 578 VCLWEIFSFALQPYYGL-THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS 636
+ LWE+FS PY G+ + K IKEG + +P++ P +YD+MK CW+ P+ RP+
Sbjct: 235 IFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT 294
Query: 637 FRTIYQTL 644
F+ I Q +
Sbjct: 295 FKQIVQLI 302
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 168/308 (54%), Gaps = 16/308 (5%)
Query: 345 SYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK 404
+Y D P + EFPRN + + + LG GAFG+V +A A GL+K + VAVKMLK
Sbjct: 26 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 85
Query: 405 DEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLR--- 460
A + E +L+ +H NIV LLG C +G P ++ EY GDL +FLR
Sbjct: 86 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 145
Query: 461 ---ICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517
ICS +S L DL++ + Q+A GM +L+ + +HRDLA R
Sbjct: 146 DSFICSK--------TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 197
Query: 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFG 577
N L+ + KI DFGL+R + Y N +PV+WM ESI YT ESDVW++G
Sbjct: 198 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG 257
Query: 578 VCLWEIFSFALQPYYGL-THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS 636
+ LWE+FS PY G+ + K IKEG + +P++ P +YD+MK CW+ P+ RP+
Sbjct: 258 IFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT 317
Query: 637 FRTIYQTL 644
F+ I Q +
Sbjct: 318 FKQIVQLI 325
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 168/308 (54%), Gaps = 16/308 (5%)
Query: 345 SYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK 404
+Y D P + EFPRN + + + LG GAFG+V +A A GL+K + VAVKMLK
Sbjct: 21 NYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 80
Query: 405 DEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLR--- 460
A + E +L+ +H NIV LLG C +G P ++ EY GDL +FLR
Sbjct: 81 PSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 140
Query: 461 ---ICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517
ICS +S L DL++ + Q+A GM +L+ + +HRDLA R
Sbjct: 141 DSFICSK--------TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 192
Query: 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFG 577
N L+ + KI DFGL+R + Y N +PV+WM ESI YT ESDVW++G
Sbjct: 193 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG 252
Query: 578 VCLWEIFSFALQPYYGL-THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS 636
+ LWE+FS PY G+ + K IKEG + +P++ P +YD+MK CW+ P+ RP+
Sbjct: 253 IFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT 312
Query: 637 FRTIYQTL 644
F+ I Q +
Sbjct: 313 FKQIVQLI 320
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 168/299 (56%), Gaps = 11/299 (3%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 14 RLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE 73
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFV- 131
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y + L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 132 -PYKDLYKDF-----LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKI 185
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589
DFGL+R +Y Y + +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 186 XDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 245
Query: 590 PYYGLT-HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N+
Sbjct: 246 PYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 170/299 (56%), Gaps = 7/299 (2%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 16 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 75
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 76 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFV- 133
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y +++ L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 134 -PYKEAPEDLYK-DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 191
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589
DFGL+R +Y Y + +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 192 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 251
Query: 590 PYYGLT-HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N+
Sbjct: 252 PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 168/299 (56%), Gaps = 11/299 (3%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 14 RLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE 73
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFV- 131
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y + L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 132 -PYKDLYKDF-----LTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKI 185
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589
DFGL+R +Y Y + +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 186 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 245
Query: 590 PYYGL-THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N+
Sbjct: 246 PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 159/285 (55%), Gaps = 24/285 (8%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
D++ +G+G FG VF + + TLVAVK ++ L+ F +EA +L +
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRL-----RADNTLVAVKSCRETLPPDLKAKFLQEARILKQ 168
Query: 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
+ HPNIV+L+GVC +P+ ++ E + GD FLR +
Sbjct: 169 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-------------------R 209
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
L L+ + A+GM YL + +HRDLA RNCL+ ++ V+KI+DFG+SR+ Y
Sbjct: 210 LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269
Query: 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
+PV+W E++ Y +Y+ ESDVW+FG+ LWE FS PY L++++ ++++
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE 329
Query: 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
+G L P+ PDA++ LM+ CW +P RPSF TIYQ L +I++
Sbjct: 330 KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 170/299 (56%), Gaps = 7/299 (2%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFV- 122
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y +++ L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 123 -PYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589
DFGL+R +Y Y + +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
Query: 590 PYYGLT-HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N+
Sbjct: 241 PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 170/299 (56%), Gaps = 7/299 (2%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFV- 122
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y +++ L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 123 -PYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589
DFGL+R +Y Y + +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
Query: 590 PYYGLT-HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N+
Sbjct: 241 PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 170/299 (56%), Gaps = 7/299 (2%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 51 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 110
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 111 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFV- 168
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y +++ L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 169 -PYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 226
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589
DFGL+R +Y Y + +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 286
Query: 590 PYYGL-THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N+
Sbjct: 287 PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 170/299 (56%), Gaps = 7/299 (2%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 14 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 73
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFV- 131
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y +++ L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 132 -PYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589
DFGL+R +Y Y + +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 590 PYYGL-THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N+
Sbjct: 250 PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 157/293 (53%), Gaps = 26/293 (8%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E +I + +G G FG V + L ++ VA+K LK +E + DF EA
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ +FDHPNI++L GV KP+ ++ EYM G L+ FLR
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-------------------K 139
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
Q + L+ + IASGM YLSD FVHRDLA RN LIN +V K++DFGLSR L
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSR--VL 197
Query: 541 QDYYKG---DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+D + IP+RW E+I Y K+T SDVW++G+ LWE+ S+ +PY+ ++++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
+V+K + EG L P + P ALY LM CW NRP F I L + R+
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 166/319 (52%), Gaps = 30/319 (9%)
Query: 339 KLPCNASYHQTDARLNPKLEQLEFPR----NDIIYVRDLGQGAFGRVFQAKAPGLLKHEE 394
KLP +Y +P EF + +I + +G G FG V + L ++
Sbjct: 13 KLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK--LPSKK 70
Query: 395 FTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGD 454
VA+K LK +E + DF EA ++ +FDHPNI++L GV KP+ ++ EYM G
Sbjct: 71 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 130
Query: 455 LNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514
L+ FLR Q + L+ + IASGM YLSD +VHRDL
Sbjct: 131 LDSFLR-------------------KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL 171
Query: 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKG---DENDAIPVRWMPLESILYNKYTVES 571
A RN LIN +V K++DFGLSR L+D + IP+RW E+I Y K+T S
Sbjct: 172 AARNILINSNLVCKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 229
Query: 572 DVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKP 631
DVW++G+ LWE+ S+ +PY+ +++++V+K + EG L P + P ALY LM CW
Sbjct: 230 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDR 289
Query: 632 MNRPSFRTIYQTLWNIKRD 650
NRP F I L + R+
Sbjct: 290 NNRPKFEQIVSILDKLIRN 308
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 166/319 (52%), Gaps = 30/319 (9%)
Query: 339 KLPCNASYHQTDARLNPKLEQLEFPR----NDIIYVRDLGQGAFGRVFQAKAPGLLKHEE 394
KLP +Y +P EF + +I + +G G FG V + L ++
Sbjct: 15 KLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK--LPSKK 72
Query: 395 FTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGD 454
VA+K LK +E + DF EA ++ +FDHPNI++L GV KP+ ++ EYM G
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 455 LNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514
L+ FLR Q + L+ + IASGM YLSD +VHRDL
Sbjct: 133 LDSFLR-------------------KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL 173
Query: 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKG---DENDAIPVRWMPLESILYNKYTVES 571
A RN LIN +V K++DFGLSR L+D + IP+RW E+I Y K+T S
Sbjct: 174 AARNILINSNLVCKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 572 DVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKP 631
DVW++G+ LWE+ S+ +PY+ +++++V+K + EG L P + P ALY LM CW
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 632 MNRPSFRTIYQTLWNIKRD 650
NRP F I L + R+
Sbjct: 292 NNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 166/319 (52%), Gaps = 30/319 (9%)
Query: 339 KLPCNASYHQTDARLNPKLEQLEFPR----NDIIYVRDLGQGAFGRVFQAKAPGLLKHEE 394
KLP +Y +P EF + +I + +G G FG V + L ++
Sbjct: 15 KLPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK--LPSKK 72
Query: 395 FTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGD 454
VA+K LK +E + DF EA ++ +FDHPNI++L GV KP+ ++ EYM G
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 455 LNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514
L+ FLR Q + L+ + IASGM YLSD +VHRDL
Sbjct: 133 LDSFLR-------------------KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL 173
Query: 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKG---DENDAIPVRWMPLESILYNKYTVES 571
A RN LIN +V K++DFGLSR L+D + IP+RW E+I Y K+T S
Sbjct: 174 AARNILINSNLVCKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 572 DVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKP 631
DVW++G+ LWE+ S+ +PY+ +++++V+K + EG L P + P ALY LM CW
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 632 MNRPSFRTIYQTLWNIKRD 650
NRP F I L + R+
Sbjct: 292 NNRPKFEQIVSILDKLIRN 310
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 157/293 (53%), Gaps = 26/293 (8%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E +I + +G G FG V + L ++ VA+K LK +E + DF EA
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ +FDHPNI++L GV KP+ ++ EYM G L+ FLR
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-------------------K 110
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
Q + L+ + IASGM YLSD +VHRDLA RN LIN +V K++DFGLSR L
Sbjct: 111 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR--VL 168
Query: 541 QDYYKG---DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+D + IP+RW E+I Y K+T SDVW++G+ LWE+ S+ +PY+ ++++
Sbjct: 169 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 228
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
+V+K + EG L P + P ALY LM CW NRP F I L + R+
Sbjct: 229 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 157/293 (53%), Gaps = 26/293 (8%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E +I + +G G FG V + L ++ VA+K LK +E + DF EA
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 86
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ +FDHPNI++L GV KP+ ++ EYM G L+ FLR
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-------------------K 127
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
Q + L+ + IASGM YLSD +VHRDLA RN LIN +V K++DFGLSR L
Sbjct: 128 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR--VL 185
Query: 541 QDYYKG---DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+D + IP+RW E+I Y K+T SDVW++G+ LWE+ S+ +PY+ ++++
Sbjct: 186 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 245
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
+V+K + EG L P + P ALY LM CW NRP F I L + R+
Sbjct: 246 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 157/293 (53%), Gaps = 26/293 (8%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E +I + +G G FG V + L ++ VA+K LK +E + DF EA
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ +FDHPNI++L GV KP+ ++ EYM G L+ FLR
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-------------------K 139
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
Q + L+ + IASGM YLSD +VHRDLA RN LIN +V K++DFGLSR L
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR--VL 197
Query: 541 QDYYKG---DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+D + IP+RW E+I Y K+T SDVW++G+ LWE+ S+ +PY+ ++++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
+V+K + EG L P + P ALY LM CW NRP F I L + R+
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 157/293 (53%), Gaps = 26/293 (8%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E +I + +G G FG V + L ++ VA+K LK +E + DF EA
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ +FDHPNI++L GV KP+ ++ EYM G L+ FLR
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-------------------K 139
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
Q + L+ + IASGM YLSD +VHRDLA RN LIN +V K++DFGLSR L
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR--VL 197
Query: 541 QDYYKG---DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+D + IP+RW E+I Y K+T SDVW++G+ LWE+ S+ +PY+ ++++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
+V+K + EG L P + P ALY LM CW NRP F I L + R+
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 159/282 (56%), Gaps = 13/282 (4%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDFEREACLLA 423
NDI + +G+G FG+V +A+ +K + + A+K +K+ AS+ DF E +L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKAR----IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 70
Query: 424 EF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
+ HPNI+ LLG C + L EY G+L DFLR + + T + +
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR----KSRVLETDPAFAIANSTA 126
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
LS+ L+ A +A GM YLS ++F+HRDLA RN L+ + V KIADFGLSR Q+
Sbjct: 127 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG---QE 183
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
Y +PVRWM +ES+ Y+ YT SDVW++GV LWEI S PY G+T E+ +
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 243
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +G L+ P N D +YDLM+ CW KP RPSF I +L
Sbjct: 244 LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 285
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 159/282 (56%), Gaps = 13/282 (4%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDFEREACLLA 423
NDI + +G+G FG+V +A+ +K + + A+K +K+ AS+ DF E +L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKAR----IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 80
Query: 424 EF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
+ HPNI+ LLG C + L EY G+L DFLR + + T + +
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR----KSRVLETDPAFAIANSTA 136
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
LS+ L+ A +A GM YLS ++F+HRDLA RN L+ + V KIADFGLSR Q+
Sbjct: 137 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG---QE 193
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
Y +PVRWM +ES+ Y+ YT SDVW++GV LWEI S PY G+T E+ +
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 253
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +G L+ P N D +YDLM+ CW KP RPSF I +L
Sbjct: 254 LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 295
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 158/285 (55%), Gaps = 24/285 (8%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
D++ +G+G FG VF + + TLVAVK ++ L+ F +EA +L +
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRL-----RADNTLVAVKSCRETLPPDLKAKFLQEARILKQ 168
Query: 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
+ HPNIV+L+GVC +P+ ++ E + GD FLR +
Sbjct: 169 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-------------------R 209
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
L L+ + A+GM YL + +HRDLA RNCL+ ++ V+KI+DFG+SR+
Sbjct: 210 LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXA 269
Query: 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
+PV+W E++ Y +Y+ ESDVW+FG+ LWE FS PY L++++ ++++
Sbjct: 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE 329
Query: 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
+G L P+ PDA++ LM+ CW +P RPSF TIYQ L +I++
Sbjct: 330 KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 171/301 (56%), Gaps = 11/301 (3%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 14 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 73
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFV- 131
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y +++ L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 132 -PYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
Query: 530 ADFGLSRKMYL--QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
DFGL+R +Y KGD +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 190 CDFGLARDIYKDPDXVRKGDAR--LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 247
Query: 588 LQPYYGL-THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N
Sbjct: 248 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
Query: 647 I 647
+
Sbjct: 308 L 308
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 157/293 (53%), Gaps = 26/293 (8%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E +I + +G G FG V + L ++ VA+K LK +E + DF EA
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ +FDHPNI++L GV KP+ ++ EYM G L+ FLR
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-------------------K 139
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
Q + L+ + IASGM YLSD +VHRDLA RN LIN +V K++DFGL+R L
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLAR--VL 197
Query: 541 QDYYKG---DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+D + IP+RW E+I Y K+T SDVW++G+ LWE+ S+ +PY+ ++++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
+V+K + EG L P + P ALY LM CW NRP F I L + R+
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 156/293 (53%), Gaps = 26/293 (8%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E +I + +G G FG V + L ++ VA+K LK +E + DF EA
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ +FDHPNI++L GV KP+ ++ EYM G L+ FLR
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-------------------K 139
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
Q + L+ + IASGM YLSD +VHRDLA RN LIN +V K++DFGL R L
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGR--VL 197
Query: 541 QDYYKG---DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+D + IP+RW E+I Y K+T SDVW++G+ LWE+ S+ +PY+ ++++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
+V+K + EG L P + P ALY LM CW NRP F I L + R+
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 165/319 (51%), Gaps = 30/319 (9%)
Query: 339 KLPCNASYHQTDARLNPKLEQLEFPR----NDIIYVRDLGQGAFGRVFQAKAPGLLKHEE 394
KLP +Y +P EF + +I + +G G FG V + L ++
Sbjct: 15 KLPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLK--LPSKK 72
Query: 395 FTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGD 454
VA+K LK +E + DF EA ++ +FDHPNI++L GV KP+ ++ E M G
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 132
Query: 455 LNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514
L+ FLR Q + L+ + IASGM YLSD +VHRDL
Sbjct: 133 LDSFLR-------------------KHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDL 173
Query: 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKG---DENDAIPVRWMPLESILYNKYTVES 571
A RN LIN +V K++DFGLSR L+D + IP+RW E+I Y K+T S
Sbjct: 174 AARNILINSNLVCKVSDFGLSR--VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 572 DVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKP 631
DVW++G+ LWE+ S+ +PY+ +++++V+K + EG L P + P ALY LM CW
Sbjct: 232 DVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 632 MNRPSFRTIYQTLWNIKRD 650
NRP F I L + R+
Sbjct: 292 NNRPKFEQIVSILDKLIRN 310
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 159/282 (56%), Gaps = 13/282 (4%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDFEREACLLA 423
NDI + +G+G FG+V +A+ +K + + A+K +K+ AS+ DF E +L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKAR----IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 77
Query: 424 EF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
+ HPNI+ LLG C + L EY G+L DFLR + + T + +
Sbjct: 78 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR----KSRVLETDPAFAIANSTA 133
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
LS+ L+ A +A GM YLS ++F+HR+LA RN L+ + V KIADFGLSR Q+
Sbjct: 134 STLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRG---QE 190
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
Y +PVRWM +ES+ Y+ YT SDVW++GV LWEI S PY G+T E+ +
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 250
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +G L+ P N D +YDLM+ CW KP RPSF I +L
Sbjct: 251 LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 292
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 156/293 (53%), Gaps = 26/293 (8%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E +I + +G G FG V + L ++ VA+K LK +E + DF EA
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 69
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ +FDHPNI++L GV KP+ ++ E M G L+ FLR
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-------------------K 110
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
Q + L+ + IASGM YLSD +VHRDLA RN LIN +V K++DFGLSR L
Sbjct: 111 HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR--VL 168
Query: 541 QDYYKG---DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+D + IP+RW E+I Y K+T SDVW++G+ LWE+ S+ +PY+ ++++
Sbjct: 169 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 228
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
+V+K + EG L P + P ALY LM CW NRP F I L + R+
Sbjct: 229 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 167/301 (55%), Gaps = 13/301 (4%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 16 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE 75
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 76 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFVP 134
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
+ L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 135 YKPEDLYKDF-----LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKI 189
Query: 530 ADFGLSRKMYLQ--DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
DFGL+R + KGD +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 190 CDFGLARDIXKDPDXVRKGDAR--LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 247
Query: 588 LQPYYGLT-HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N
Sbjct: 248 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
Query: 647 I 647
+
Sbjct: 308 L 308
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 170/301 (56%), Gaps = 11/301 (3%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFV- 122
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y +++ L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 123 -PYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
Query: 530 ADFGLSRKMYLQ--DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
DFGL+R + KGD +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 181 CDFGLARDIXKDPDXVRKGDAR--LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 238
Query: 588 LQPYYGL-THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N
Sbjct: 239 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
Query: 647 I 647
+
Sbjct: 299 L 299
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 170/301 (56%), Gaps = 11/301 (3%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR-SKRNEFV- 122
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y +++ L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 123 -PYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
Query: 530 ADFGLSRKMYLQ--DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
DFGL+R + KGD +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 181 CDFGLARDIXKDPDXVRKGDAR--LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 238
Query: 588 LQPYYGLT-HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N
Sbjct: 239 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
Query: 647 I 647
+
Sbjct: 299 L 299
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 170/301 (56%), Gaps = 11/301 (3%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 14 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 73
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFV- 131
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y +++ L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 132 -PYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
Query: 530 ADFGLSRKMYLQ--DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
DFGL+R + KGD +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 190 CDFGLARDIXKDPDXVRKGDAR--LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 247
Query: 588 LQPYYGLT-HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N
Sbjct: 248 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
Query: 647 I 647
+
Sbjct: 308 L 308
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 169/301 (56%), Gaps = 12/301 (3%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 15 RLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 74
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYIN 469
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR N ++
Sbjct: 75 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR-SKRNEFV- 132
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
Y + E L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI
Sbjct: 133 -PYKTPEDLYKDF--LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
Query: 530 ADFGLSRKMYLQ--DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
DFGL+R + KGD +P++WM E+I YT++SDVW+FGV LWEIFS
Sbjct: 190 CDFGLARDIXKDPDXVRKGDAR--LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 247
Query: 588 LQPYYGLT-HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646
PY G+ EE + +KEG ++APD T +Y M CW+ +P RP+F + + L N
Sbjct: 248 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
Query: 647 I 647
+
Sbjct: 308 L 308
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 155/293 (52%), Gaps = 26/293 (8%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E +I + +G G FG V + L ++ VA+K LK +E + DF EA
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK--LPSKKEISVAIKTLKVGYTEKQRRDFLGEAS 98
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ +FDHPNI++L GV KP+ ++ E M G L+ FLR
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-------------------K 139
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
Q + L+ + IASGM YLSD VHRDLA RN LIN +V K++DFGLSR L
Sbjct: 140 HDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSR--VL 197
Query: 541 QDYYKG---DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+D + IP+RW E+I Y K+T SDVW++G+ LWE+ S+ +PY+ ++++
Sbjct: 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 257
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
+V+K + EG L P + P ALY LM CW NRP F I L + R+
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 175/323 (54%), Gaps = 34/323 (10%)
Query: 336 DLSKLPCNASYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGL 389
D+S + H + LNP+L Q + P + I++ + +G+G FG V+ L
Sbjct: 13 DISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---L 69
Query: 390 LKHEEFTL-VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLL 446
L ++ + AVK L + F E ++ +F HPN++ LLG+C + G P+ +L
Sbjct: 70 LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 129
Query: 447 FEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD 506
YM GDL +F+R N T++ + DLI LQ+A GM YL+
Sbjct: 130 -PYMKHGDLRNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKYLAS 169
Query: 507 RKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILY 564
+KFVHRDLA RNC+++++ VK+ADFGL+R MY ++YY +PV+WM LES+
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 565 NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMK 624
K+T +SDVW+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 289
Query: 625 LCWNMKPMNRPSFRTIYQTLWNI 647
CW+ K RPSF + + I
Sbjct: 290 KCWHPKAEMRPSFSELVSRISAI 312
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 158/289 (54%), Gaps = 30/289 (10%)
Query: 367 IIYVRDLGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
I R +G G FG V K PG K E VA+K LK +E + DF EA ++ +
Sbjct: 24 ITIERVIGAGEFGEVCSGRLKLPG--KRE--LPVAIKTLKVGYTEKQRRDFLGEASIMGQ 79
Query: 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
FDHPNI+ L GV KP+ ++ EYM G L+ FL+ Q
Sbjct: 80 FDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK-------------------KNDGQ 120
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
+ L+ + I++GM YLSD +VHRDLA RN LIN +V K++DFGLSR L+D
Sbjct: 121 FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR--VLEDDP 178
Query: 545 KG---DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601
+ IP+RW E+I + K+T SDVW++G+ +WE+ S+ +PY+ +T+++V+K
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIK 238
Query: 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
++EG L +P + P ALY LM CW + +RP F I L + R+
Sbjct: 239 AVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRN 287
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 154/285 (54%), Gaps = 32/285 (11%)
Query: 373 LGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
+G G FG V K PG K E F VA+K LK +E + DF EA ++ +FDHPN+
Sbjct: 41 IGAGEFGEVCSGHLKLPG--KREIF--VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
+ L GV P+ ++ E+M G L+ FLR Q + L
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLR-------------------QNDGQFTVIQL 137
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD-----YYK 545
+ + IA+GM YL+D +VHRDLA RN L+N +V K++DFGLSR +L+D Y
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSR--FLEDDTSDPTYT 195
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
IP+RW E+I Y K+T SDVW++G+ +WE+ S+ +PY+ +T+++V+ I++
Sbjct: 196 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ 255
Query: 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
L P + P AL+ LM CW +RP F I TL + R+
Sbjct: 256 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 300
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 172/315 (54%), Gaps = 34/315 (10%)
Query: 344 ASYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL 397
S H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ +
Sbjct: 1 GSVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKI 57
Query: 398 -VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGD 454
AVK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GD
Sbjct: 58 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGD 116
Query: 455 LNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514
L +F+R N T++ + DLI LQ+A GM YL+ +KFVHRDL
Sbjct: 117 LRNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKYLASKKFVHRDL 157
Query: 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNKYTVESD 572
A RNC+++++ VK+ADFGL+R MY ++YY +PV+WM LES+ K+T +SD
Sbjct: 158 AARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 217
Query: 573 VWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPM 632
VW+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K
Sbjct: 218 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 277
Query: 633 NRPSFRTIYQTLWNI 647
RPSF + + I
Sbjct: 278 MRPSFSELVSRISAI 292
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 164/313 (52%), Gaps = 39/313 (12%)
Query: 343 NASYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQA--KAPGLLKHEEFTLVAV 400
N + HQ L+ ++E R +G G FG V K PG + VA+
Sbjct: 30 NRAVHQFAKELDASCIKIE---------RVIGAGEFGEVCSGRLKLPG----KRDVAVAI 76
Query: 401 KMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLR 460
K LK +E + DF EA ++ +FDHPN+V L GV GKP+ ++ E+M G L+ FLR
Sbjct: 77 KTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR 136
Query: 461 ICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520
Q + L+ + IA+GM YL+D +VHRDLA RN L
Sbjct: 137 -------------------KHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNIL 177
Query: 521 INDQMVVKIADFGLSRKMYLQDYYKG---DENDAIPVRWMPLESILYNKYTVESDVWAFG 577
+N +V K++DFGLSR ++D + IPVRW E+I Y K+T SDVW++G
Sbjct: 178 VNSNLVCKVSDFGLSR--VIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYG 235
Query: 578 VCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ +WE+ S+ +PY+ +++++V+K I+EG L AP + P L+ LM CW + RP F
Sbjct: 236 IVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKF 295
Query: 638 RTIYQTLWNIKRD 650
I L + R+
Sbjct: 296 EQIVGILDKMIRN 308
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/333 (35%), Positives = 177/333 (53%), Gaps = 47/333 (14%)
Query: 326 APAPSQDVNIDLSKLPCNASYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFG 379
+P V+IDLS L NP+L Q + P + I++ + +G+G FG
Sbjct: 17 SPLLQNTVHIDLSAL-------------NPELVQAVQHVVIGPSSLIVHFNEVIGRGHFG 63
Query: 380 RVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC- 437
V+ LL ++ + AVK L + F E ++ +F HPN++ LLG+C
Sbjct: 64 CVYHGT---LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 120
Query: 438 -AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQ 496
+ G P+ +L YM GDL +F+R N T++ + DLI LQ
Sbjct: 121 RSEGSPLVVL-PYMKHGDLRNFIR--------NETHNP-----------TVKDLIGFGLQ 160
Query: 497 IASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPV 554
+A GM YL+ +KFVHRDLA RNC+++++ VK+ADFGL+R MY ++YY +PV
Sbjct: 161 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
Query: 555 RWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDN 614
+WM LES+ K+T +SDVW+FGV LWE+ + PY + ++ Y+ +G L P+
Sbjct: 221 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY 280
Query: 615 TPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
PD LY++M CW+ K RPSF + + I
Sbjct: 281 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 172/314 (54%), Gaps = 34/314 (10%)
Query: 345 SYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL- 397
+ H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ +
Sbjct: 4 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIH 60
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDL 455
AVK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GDL
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDL 119
Query: 456 NDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515
+F+R N T++ + DLI LQ+A GM YL+ +KFVHRDLA
Sbjct: 120 RNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKYLASKKFVHRDLA 160
Query: 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNKYTVESDV 573
RNC+++++ VK+ADFGL+R MY ++YY +PV+WM LES+ K+T +SDV
Sbjct: 161 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 220
Query: 574 WAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMN 633
W+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K
Sbjct: 221 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEM 280
Query: 634 RPSFRTIYQTLWNI 647
RPSF + + I
Sbjct: 281 RPSFSELVSRISAI 294
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 171/312 (54%), Gaps = 34/312 (10%)
Query: 347 HQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL-VA 399
H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ + A
Sbjct: 3 HIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIHCA 59
Query: 400 VKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLND 457
VK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GDL +
Sbjct: 60 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRN 118
Query: 458 FLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517
F+R N T++ + DLI LQ+A GM YL+ +KFVHRDLA R
Sbjct: 119 FIR--------NETHNP-----------TVKDLIGFGLQVAKGMKYLASKKFVHRDLAAR 159
Query: 518 NCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNKYTVESDVWA 575
NC+++++ VK+ADFGL+R MY ++YY +PV+WM LES+ K+T +SDVW+
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 576 FGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP 635
FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K RP
Sbjct: 220 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRP 279
Query: 636 SFRTIYQTLWNI 647
SF + + I
Sbjct: 280 SFSELVSRISAI 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 172/314 (54%), Gaps = 34/314 (10%)
Query: 345 SYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL- 397
+ H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ +
Sbjct: 3 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIH 59
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDL 455
AVK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GDL
Sbjct: 60 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDL 118
Query: 456 NDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515
+F+R N T++ + DLI LQ+A GM YL+ +KFVHRDLA
Sbjct: 119 RNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKYLASKKFVHRDLA 159
Query: 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNKYTVESDV 573
RNC+++++ VK+ADFGL+R MY ++YY +PV+WM LES+ K+T +SDV
Sbjct: 160 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 219
Query: 574 WAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMN 633
W+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K
Sbjct: 220 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEM 279
Query: 634 RPSFRTIYQTLWNI 647
RPSF + + I
Sbjct: 280 RPSFSELVSRISAI 293
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 172/314 (54%), Gaps = 34/314 (10%)
Query: 345 SYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL- 397
+ H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ +
Sbjct: 4 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIH 60
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDL 455
AVK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GDL
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDL 119
Query: 456 NDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515
+F+R N T++ + DLI LQ+A GM YL+ +KFVHRDLA
Sbjct: 120 RNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKYLASKKFVHRDLA 160
Query: 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNKYTVESDV 573
RNC+++++ VK+ADFGL+R MY ++YY +PV+WM LES+ K+T +SDV
Sbjct: 161 ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 220
Query: 574 WAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMN 633
W+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K
Sbjct: 221 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEM 280
Query: 634 RPSFRTIYQTLWNI 647
RPSF + + I
Sbjct: 281 RPSFSELVSRISAI 294
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 155/283 (54%), Gaps = 31/283 (10%)
Query: 373 LGQGAFGRVFQAKAPGLLKH---EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+G G FG V++ G+LK ++ VA+K LK +E + DF EA ++ +F H N
Sbjct: 52 IGAGEFGEVYK----GMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L GV + KPM ++ EYM G L+ FLR + + S
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLR-------------------EKDGEFSVLQ 148
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGD-- 547
L+ + IA+GM YL++ +VHRDLA RN L+N +V K++DFGLSR L+D +
Sbjct: 149 LVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR--VLEDDPEATYT 206
Query: 548 -ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
IP+RW E+I Y K+T SDVW+FG+ +WE+ ++ +PY+ L++ EV+K I +G
Sbjct: 207 TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 266
Query: 607 NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
L P + P A+Y LM CW + RP F I L + R
Sbjct: 267 FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 171/312 (54%), Gaps = 34/312 (10%)
Query: 347 HQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL-VA 399
H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ + A
Sbjct: 1 HIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIHCA 57
Query: 400 VKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLND 457
VK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GDL +
Sbjct: 58 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRN 116
Query: 458 FLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517
F+R N T++ + DLI LQ+A GM YL+ +KFVHRDLA R
Sbjct: 117 FIR--------NETHNP-----------TVKDLIGFGLQVAKGMKYLASKKFVHRDLAAR 157
Query: 518 NCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNKYTVESDVWA 575
NC+++++ VK+ADFGL+R MY ++YY +PV+WM LES+ K+T +SDVW+
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 576 FGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP 635
FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K RP
Sbjct: 218 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRP 277
Query: 636 SFRTIYQTLWNI 647
SF + + I
Sbjct: 278 SFSELVSRISAI 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 170/308 (55%), Gaps = 34/308 (11%)
Query: 351 ARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL-VAVKML 403
+ LNP+L Q + P + I++ + +G+G FG V+ LL ++ + AVK L
Sbjct: 2 SALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIHCAVKSL 58
Query: 404 KDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRI 461
+ F E ++ +F HPN++ LLG+C + G P+ +L YM GDL +F+R
Sbjct: 59 NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIR- 116
Query: 462 CSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521
N T++ + DLI LQ+A GM YL+ +KFVHRDLA RNC++
Sbjct: 117 -------NETHNP-----------TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 158
Query: 522 NDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNKYTVESDVWAFGVC 579
+++ VK+ADFGL+R MY ++YY +PV+WM LES+ K+T +SDVW+FGV
Sbjct: 159 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 218
Query: 580 LWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRT 639
LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K RPSF
Sbjct: 219 LWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 278
Query: 640 IYQTLWNI 647
+ + I
Sbjct: 279 LVSRISAI 286
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 153/285 (53%), Gaps = 32/285 (11%)
Query: 373 LGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
+G G FG V K PG K E F VA+K LK +E + DF EA ++ +FDHPN+
Sbjct: 15 IGAGEFGEVCSGHLKLPG--KREIF--VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
+ L GV P+ ++ E+M G L+ FLR Q + L
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLR-------------------QNDGQFTVIQL 111
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD-----YYK 545
+ + IA+GM YL+D +VHR LA RN L+N +V K++DFGLSR +L+D Y
Sbjct: 112 VGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSR--FLEDDTSDPTYT 169
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
IP+RW E+I Y K+T SDVW++G+ +WE+ S+ +PY+ +T+++V+ I++
Sbjct: 170 SALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ 229
Query: 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
L P + P AL+ LM CW +RP F I TL + R+
Sbjct: 230 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 274
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 159/283 (56%), Gaps = 30/283 (10%)
Query: 373 LGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
+G G FG V K PG K E VA+K LK ++ + DF EA ++ +FDHPNI
Sbjct: 16 IGVGEFGEVCSGRLKVPG--KRE--ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
+ L GV KP+ ++ EYM G L+ FLR N +G ++ ++ L
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLR----KN--DGRFTVIQ-------------L 112
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG---D 547
+ + I SGM YLSD +VHRDLA RN L+N +V K++DFG+SR L+D +
Sbjct: 113 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR--VLEDDPEAAYTT 170
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
IP+RW E+I Y K+T SDVW++G+ +WE+ S+ +PY+ +++++V+K I+EG
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 230
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
L P + P AL+ LM CW + +RP F I L + R+
Sbjct: 231 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 273
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 158/283 (55%), Gaps = 30/283 (10%)
Query: 373 LGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
+G G FG V K PG K E VA+K LK ++ + DF EA ++ +FDHPNI
Sbjct: 22 IGVGEFGEVCSGRLKVPG--KRE--ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
+ L GV KP+ ++ EYM G L+ FLR +G ++ ++ L
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLR------KNDGRFTVIQ-------------L 118
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG---D 547
+ + I SGM YLSD +VHRDLA RN L+N +V K++DFG+SR L+D +
Sbjct: 119 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSR--VLEDDPEAAYTT 176
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
IP+RW E+I Y K+T SDVW++G+ +WE+ S+ +PY+ +++++V+K I+EG
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 236
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
L P + P AL+ LM CW + +RP F I L + R+
Sbjct: 237 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 279
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 348 QTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEE--FTLVAVKMLKD 405
+ D P E R I R +G+G FG V Q G+ E VA+K K+
Sbjct: 373 EEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQ----GIYMSPENPAMAVAIKTCKN 428
Query: 406 EASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPN 465
S+ ++ F +EA + +FDHP+IVKL+GV P+ ++ E G+L FL++
Sbjct: 429 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV---- 483
Query: 466 NYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525
R L LI A Q+++ + YL ++FVHRD+A RN L++
Sbjct: 484 ---------------RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND 528
Query: 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFS 585
VK+ DFGLSR M YYK + +P++WM ESI + ++T SDVW FGVC+WEI
Sbjct: 529 CVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
Query: 586 FALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
++P+ G+ + +V+ I+ G L P N P LY LM CW P RP F + L
Sbjct: 588 HGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647
Query: 646 NI 647
I
Sbjct: 648 TI 649
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 151/285 (52%), Gaps = 11/285 (3%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
EFPR ++ + + LG GAFG+V A A G+ K VAVKMLK++A + E
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 421 LLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPN------NYINGTYS 473
++ + H NIV LLG C + P+ L+FEY GDL ++LR Y N
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
E ++ L+ DL+ A Q+A GM +L + VHRDLA RN L+ VVKI DFG
Sbjct: 161 EEEEDLN---VLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFG 217
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
L+R + Y N +PV+WM ES+ YT++SDVW++G+ LWEIFS + PY G
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
Query: 594 L-THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ K I+ G + P + +Y +M+ CW RPSF
Sbjct: 278 IPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSF 322
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 172/345 (49%), Gaps = 49/345 (14%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 16 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 75
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLR--------- 460
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR
Sbjct: 76 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 135
Query: 461 ------ICSPNNYINGTYSSM--------------------ESSIHRVPQ---------- 484
+Y+ + E S+ V +
Sbjct: 136 KTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKD 195
Query: 485 -LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI DFGL+R +Y
Sbjct: 196 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 255
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT-HEEVVKY 602
Y + +P++WM E+I YT++SDVW+FGV LWEIFS PY G+ EE +
Sbjct: 256 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 315
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+KEG ++APD T +Y M CW+ +P RP+F + + L N+
Sbjct: 316 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 172/345 (49%), Gaps = 49/345 (14%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 14 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 73
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLR--------- 460
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 461 ------ICSPNNYINGTYSSM--------------------ESSIHRVPQ---------- 484
+Y+ + E S+ V +
Sbjct: 134 KTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKD 193
Query: 485 -LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI DFGL+R +Y
Sbjct: 194 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 253
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT-HEEVVKY 602
Y + +P++WM E+I YT++SDVW+FGV LWEIFS PY G+ EE +
Sbjct: 254 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 313
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+KEG ++APD T +Y M CW+ +P RP+F + + L N+
Sbjct: 314 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 172/345 (49%), Gaps = 49/345 (14%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 7 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 66
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLR--------- 460
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR
Sbjct: 67 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 126
Query: 461 ------ICSPNNYINGTYSSM--------------------ESSIHRVPQ---------- 484
+Y+ + E S+ V +
Sbjct: 127 KTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKD 186
Query: 485 -LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI DFGL+R +Y
Sbjct: 187 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 246
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT-HEEVVKY 602
Y + +P++WM E+I YT++SDVW+FGV LWEIFS PY G+ EE +
Sbjct: 247 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 306
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+KEG ++APD T +Y M CW+ +P RP+F + + L N+
Sbjct: 307 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 172/345 (49%), Gaps = 49/345 (14%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
RL + EFPR+ + + LG+GAFG+V +A A G+ K VAVKMLK+ A+
Sbjct: 9 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 68
Query: 412 QTDFEREACLLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLR--------- 460
E +L H N+V LLG C G P+ ++ E+ G+L+ +LR
Sbjct: 69 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 128
Query: 461 ------ICSPNNYINGTYSSM--------------------ESSIHRVPQ---------- 484
+Y+ + E S+ V +
Sbjct: 129 KTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKD 188
Query: 485 -LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
L+ LI + Q+A GM +L+ RK +HRDLA RN L++++ VVKI DFGL+R +Y
Sbjct: 189 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT-HEEVVKY 602
Y + +P++WM E+I YT++SDVW+FGV LWEIFS PY G+ EE +
Sbjct: 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 308
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+KEG ++APD T +Y M CW+ +P RP+F + + L N+
Sbjct: 309 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 153/287 (53%), Gaps = 28/287 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E D+ ++++LG G FG V K G VA+KM+K+ + + +F EA
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMS--EDEFIEEAK 56
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ H +V+L GVC +P+ ++ EYM G L ++LR H
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR----------------EMRH 100
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R T L+ + + M YL ++F+HRDLA RNCL+NDQ VVK++DFGLSR + L
Sbjct: 101 R---FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-L 156
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
D Y PVRW P E ++Y+K++ +SD+WAFGV +WEI+S PY T+ E
Sbjct: 157 DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
++I +G L P + +Y +M CW+ K RP+F+ + + ++
Sbjct: 217 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 263
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 153/287 (53%), Gaps = 28/287 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E D+ ++++LG G FG V K G VA+KM+K+ + + +F EA
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMS--EDEFIEEAK 71
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ H +V+L GVC +P+ ++ EYM G L ++LR H
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----------------H 115
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R T L+ + + M YL ++F+HRDLA RNCL+NDQ VVK++DFGLSR + L
Sbjct: 116 R---FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-L 171
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
D Y PVRW P E ++Y+K++ +SD+WAFGV +WEI+S PY T+ E
Sbjct: 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
++I +G L P + +Y +M CW+ K RP+F+ + + ++
Sbjct: 232 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 278
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 157/283 (55%), Gaps = 30/283 (10%)
Query: 373 LGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
+G G FG V K PG K E VA+K LK ++ + DF EA ++ +FDHPNI
Sbjct: 37 IGVGEFGEVCSGRLKVPG--KRE--ICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
+ L GV KP+ ++ EYM G L+ FLR +G ++ ++ L
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLR------KNDGRFTVIQ-------------L 133
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG---D 547
+ + I SGM YLSD VHRDLA RN L+N +V K++DFG+SR L+D +
Sbjct: 134 VGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSR--VLEDDPEAAYTT 191
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
IP+RW E+I Y K+T SDVW++G+ +WE+ S+ +PY+ +++++V+K I+EG
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 251
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
L P + P AL+ LM CW + +RP F I L + R+
Sbjct: 252 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 294
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 150/292 (51%), Gaps = 33/292 (11%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQA-----KAPGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
E R I R +G+G FG V Q + P L VA+K K+ S+ ++ F
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALA-------VAIKTCKNCTSDSVREKF 61
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
+EA + +FDHP+IVKL+GV P+ ++ E G+L FL++
Sbjct: 62 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV-------------- 106
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
R L LI A Q+++ + YL ++FVHRD+A RN L++ VK+ DFGLS
Sbjct: 107 -----RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
R M YYK + +P++WM ESI + ++T SDVW FGVC+WEI ++P+ G+
Sbjct: 162 RYMEDSTYYKASKGK-LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 220
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ +V+ I+ G L P N P LY LM CW P RP F + L I
Sbjct: 221 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 153/302 (50%), Gaps = 27/302 (8%)
Query: 348 QTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEE--FTLVAVKMLKD 405
+ D P E R I R +G+G FG V Q G+ E VA+K K+
Sbjct: 373 EEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQ----GIYMSPENPAMAVAIKTCKN 428
Query: 406 EASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPN 465
S+ ++ F +EA + +FDHP+IVKL+GV P+ ++ E G+L FL++
Sbjct: 429 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV---- 483
Query: 466 NYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525
R L LI A Q+++ + YL ++FVHRD+A RN L++
Sbjct: 484 ---------------RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATD 528
Query: 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFS 585
VK+ DFGLSR M YYK + +P++WM ESI + ++T SDVW FGVC+WEI
Sbjct: 529 CVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587
Query: 586 FALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
++P+ G+ + +V+ I+ G L P N P LY LM CW P RP F + L
Sbjct: 588 HGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647
Query: 646 NI 647
I
Sbjct: 648 TI 649
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 153/287 (53%), Gaps = 28/287 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E D+ ++++LG G FG V K G VA+KM+K+ + + +F EA
Sbjct: 11 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMS--EDEFIEEAK 62
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ H +V+L GVC +P+ ++ EYM G L ++LR H
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----------------H 106
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R T L+ + + M YL ++F+HRDLA RNCL+NDQ VVK++DFGLSR + L
Sbjct: 107 R---FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-L 162
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
D Y PVRW P E ++Y+K++ +SD+WAFGV +WEI+S PY T+ E
Sbjct: 163 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 222
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
++I +G L P + +Y +M CW+ K RP+F+ + + ++
Sbjct: 223 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 150/292 (51%), Gaps = 33/292 (11%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQA-----KAPGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
E R I R +G+G FG V Q + P L VA+K K+ S+ ++ F
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALA-------VAIKTCKNCTSDSVREKF 60
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
+EA + +FDHP+IVKL+GV P+ ++ E G+L FL++
Sbjct: 61 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV-------------- 105
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
R L LI A Q+++ + YL ++FVHRD+A RN L++ VK+ DFGLS
Sbjct: 106 -----RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
R M YYK + +P++WM ESI + ++T SDVW FGVC+WEI ++P+ G+
Sbjct: 161 RYMEDSTYYKASKGK-LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 219
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ +V+ I+ G L P N P LY LM CW P RP F + L I
Sbjct: 220 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 153/287 (53%), Gaps = 28/287 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E D+ ++++LG G FG V K G VA+KM+K+ + + +F EA
Sbjct: 4 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMS--EDEFIEEAK 55
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ H +V+L GVC +P+ ++ EYM G L ++LR H
Sbjct: 56 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----------------H 99
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R T L+ + + M YL ++F+HRDLA RNCL+NDQ VVK++DFGLSR + L
Sbjct: 100 R---FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-L 155
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
D Y PVRW P E ++Y+K++ +SD+WAFGV +WEI+S PY T+ E
Sbjct: 156 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 215
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
++I +G L P + +Y +M CW+ K RP+F+ + + ++
Sbjct: 216 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 262
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 150/292 (51%), Gaps = 33/292 (11%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQA-----KAPGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
E R I R +G+G FG V Q + P L VA+K K+ S+ ++ F
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALA-------VAIKTCKNCTSDSVREKF 86
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
+EA + +FDHP+IVKL+GV P+ ++ E G+L FL++
Sbjct: 87 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV-------------- 131
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
R L LI A Q+++ + YL ++FVHRD+A RN L++ VK+ DFGLS
Sbjct: 132 -----RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
R M YYK + +P++WM ESI + ++T SDVW FGVC+WEI ++P+ G+
Sbjct: 187 RYMEDSTYYKASKGK-LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 245
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ +V+ I+ G L P N P LY LM CW P RP F + L I
Sbjct: 246 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 153/287 (53%), Gaps = 28/287 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E D+ ++++LG G FG V K G VA+KM+K+ + + +F EA
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMS--EDEFIEEAK 56
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ H +V+L GVC +P+ ++ EYM G L ++LR H
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR----------------EMRH 100
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R T L+ + + M YL ++F+HRDLA RNCL+NDQ VVK++DFGLSR + L
Sbjct: 101 R---FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-L 156
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
D Y PVRW P E ++Y+K++ +SD+WAFGV +WEI+S PY T+ E
Sbjct: 157 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
++I +G L P + +Y +M CW+ K RP+F+ + + ++
Sbjct: 217 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 263
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 150/292 (51%), Gaps = 33/292 (11%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQA-----KAPGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
E R I R +G+G FG V Q + P L VA+K K+ S+ ++ F
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALA-------VAIKTCKNCTSDSVREKF 63
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
+EA + +FDHP+IVKL+GV P+ ++ E G+L FL++
Sbjct: 64 LQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQV-------------- 108
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
R L LI A Q+++ + YL ++FVHRD+A RN L++ VK+ DFGLS
Sbjct: 109 -----RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
R M YYK + +P++WM ESI + ++T SDVW FGVC+WEI ++P+ G+
Sbjct: 164 RYMEDSTYYKASKGK-LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ +V+ I+ G L P N P LY LM CW P RP F + L I
Sbjct: 223 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 150/292 (51%), Gaps = 33/292 (11%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQA-----KAPGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
E R I R +G+G FG V Q + P L VA+K K+ S+ ++ F
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALA-------VAIKTCKNCTSDSVREKF 55
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
+EA + +FDHP+IVKL+GV P+ ++ E G+L FL++
Sbjct: 56 LQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV-------------- 100
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
R L LI A Q+++ + YL ++FVHRD+A RN L++ VK+ DFGLS
Sbjct: 101 -----RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
R M YYK + +P++WM ESI + ++T SDVW FGVC+WEI ++P+ G+
Sbjct: 156 RYMEDSTYYKASKGK-LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 214
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ +V+ I+ G L P N P LY LM CW P RP F + L I
Sbjct: 215 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 152/283 (53%), Gaps = 28/283 (9%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
D+ ++++LG G FG V K G VA+KM+K+ + + +F EA ++
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMS--EDEFIEEAKVMMN 55
Query: 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
H +V+L GVC +P+ ++ EYM G L ++LR HR
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR----------------EMRHR--- 96
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
T L+ + + M YL ++F+HRDLA RNCL+NDQ VVK++DFGLSR + L D Y
Sbjct: 97 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEY 155
Query: 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
PVRW P E ++Y+K++ +SD+WAFGV +WEI+S PY T+ E ++I
Sbjct: 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 215
Query: 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+G L P + +Y +M CW+ K RP+F+ + + ++
Sbjct: 216 QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 27/288 (9%)
Query: 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD 426
II D G+ +GR+ + PG + VA+K LK +E + DF EA ++ +FD
Sbjct: 56 IIGSGDSGEVCYGRL---RVPG----QRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
HPNI++L GV G+ ++ EYM G L+ FLR +G ++ M+
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH------DGQFTIMQ---------- 152
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ-DYYK 545
L+ + + +GM YLSD +VHRDLA RN L++ +V K++DFGLSR + D
Sbjct: 153 ---LVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAX 209
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
IP+RW E+I + ++ SDVW+FGV +WE+ ++ +PY+ +T+ +V+ ++E
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE 269
Query: 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
G L AP P AL+ LM CW+ RP F I L + R E+
Sbjct: 270 GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 150/292 (51%), Gaps = 33/292 (11%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQA-----KAPGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
E R I R +G+G FG V Q + P L VA+K K+ S+ ++ F
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALA-------VAIKTCKNCTSDSVREKF 58
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
+EA + +FDHP+IVKL+GV P+ ++ E G+L FL++
Sbjct: 59 LQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV-------------- 103
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
R L LI A Q+++ + YL ++FVHRD+A RN L++ VK+ DFGLS
Sbjct: 104 -----RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
R M YYK + +P++WM ESI + ++T SDVW FGVC+WEI ++P+ G+
Sbjct: 159 RYMEDSTYYKASKGK-LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ +V+ I+ G L P N P LY LM CW P RP F + L I
Sbjct: 218 NNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 171/314 (54%), Gaps = 34/314 (10%)
Query: 345 SYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL- 397
+ H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ +
Sbjct: 63 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIH 119
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDL 455
AVK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GDL
Sbjct: 120 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDL 178
Query: 456 NDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515
+F+R N T++ + DLI LQ+A GM +L+ +KFVHRDLA
Sbjct: 179 RNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKFLASKKFVHRDLA 219
Query: 516 TRNCLINDQMVVKIADFGLSRKMYLQDY--YKGDENDAIPVRWMPLESILYNKYTVESDV 573
RNC+++++ VK+ADFGL+R MY +++ +PV+WM LES+ K+T +SDV
Sbjct: 220 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 279
Query: 574 WAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMN 633
W+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K
Sbjct: 280 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEM 339
Query: 634 RPSFRTIYQTLWNI 647
RPSF + + I
Sbjct: 340 RPSFSELVSRISAI 353
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 150/289 (51%), Gaps = 27/289 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEE--FTLVAVKMLKDEASEYLQTDFERE 418
E R I R +G+G FG V Q G+ E VA+K K+ S+ ++ F +E
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQ----GIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 61
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
A + +FDHP+IVKL+GV P+ ++ E G+L FL++
Sbjct: 62 ALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV----------------- 103
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
R L LI A Q+++ + YL ++FVHRD+A RN L++ VK+ DFGLSR M
Sbjct: 104 --RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 539 YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598
YYK + +P++WM ESI + ++T SDVW FGVC+WEI ++P+ G+ + +
Sbjct: 162 EDSTYYKASKGK-LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
Query: 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
V+ I+ G L P N P LY LM CW P RP F + L I
Sbjct: 221 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 175/329 (53%), Gaps = 47/329 (14%)
Query: 330 SQDVNIDLSKLPCNASYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQ 383
S V+IDLS L NP+L Q + P + I++ + +G+G FG V+
Sbjct: 7 SNTVHIDLSAL-------------NPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYH 53
Query: 384 AKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVG 440
LL ++ + AVK L + F E ++ +F HPN++ LLG+C + G
Sbjct: 54 GT---LLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 110
Query: 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASG 500
P+ +L YM GDL +F+R N T++ + DLI LQ+A G
Sbjct: 111 SPLVVL-PYMKHGDLRNFIR--------NETHNP-----------TVKDLIGFGLQVAKG 150
Query: 501 MVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY--YKGDENDAIPVRWMP 558
M +L+ +KFVHRDLA RNC+++++ VK+ADFGL+R MY +++ +PV+WM
Sbjct: 151 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 559 LESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDA 618
LES+ K+T +SDVW+FGV LWE+ + PY + ++ Y+ +G L P+ PD
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 270
Query: 619 LYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
LY++M CW+ K RPSF + + I
Sbjct: 271 LYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 171/315 (54%), Gaps = 34/315 (10%)
Query: 344 ASYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL 397
+ H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ +
Sbjct: 3 GTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKI 59
Query: 398 -VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGD 454
AVK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GD
Sbjct: 60 HCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGD 118
Query: 455 LNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514
L +F+R N T++ + DLI LQ+A GM +L+ +KFVHRDL
Sbjct: 119 LRNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKFLASKKFVHRDL 159
Query: 515 ATRNCLINDQMVVKIADFGLSRKMYLQDY--YKGDENDAIPVRWMPLESILYNKYTVESD 572
A RNC+++++ VK+ADFGL+R MY +++ +PV+WM LES+ K+T +SD
Sbjct: 160 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 219
Query: 573 VWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPM 632
VW+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K
Sbjct: 220 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAE 279
Query: 633 NRPSFRTIYQTLWNI 647
RPSF + + I
Sbjct: 280 MRPSFSELVSRISAI 294
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 155/288 (53%), Gaps = 27/288 (9%)
Query: 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD 426
II D G+ +GR+ + PG + VA+K LK +E + DF EA ++ +FD
Sbjct: 56 IIGSGDSGEVCYGRL---RVPG----QRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
HPNI++L GV G+ ++ EYM G L+ FLR +G ++ M+
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH------DGQFTIMQ---------- 152
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ-DYYK 545
L+ + + +GM YLSD +VHRDLA RN L++ +V K++DFGLSR + D
Sbjct: 153 ---LVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
IP+RW E+I + ++ SDVW+FGV +WE+ ++ +PY+ +T+ +V+ ++E
Sbjct: 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE 269
Query: 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
G L AP P AL+ LM CW+ RP F I L + R E+
Sbjct: 270 GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 171/314 (54%), Gaps = 34/314 (10%)
Query: 345 SYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL- 397
+ H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ +
Sbjct: 5 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIH 61
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDL 455
AVK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GDL
Sbjct: 62 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDL 120
Query: 456 NDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515
+F+R N T++ + DLI LQ+A GM +L+ +KFVHRDLA
Sbjct: 121 RNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKFLASKKFVHRDLA 161
Query: 516 TRNCLINDQMVVKIADFGLSRKMYLQDY--YKGDENDAIPVRWMPLESILYNKYTVESDV 573
RNC+++++ VK+ADFGL+R MY +++ +PV+WM LES+ K+T +SDV
Sbjct: 162 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 221
Query: 574 WAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMN 633
W+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K
Sbjct: 222 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEM 281
Query: 634 RPSFRTIYQTLWNI 647
RPSF + + I
Sbjct: 282 RPSFSELVSRISAI 295
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 171/314 (54%), Gaps = 34/314 (10%)
Query: 345 SYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL- 397
+ H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ +
Sbjct: 4 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIH 60
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDL 455
AVK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GDL
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDL 119
Query: 456 NDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515
+F+R N T++ + DLI LQ+A GM +L+ +KFVHRDLA
Sbjct: 120 RNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKFLASKKFVHRDLA 160
Query: 516 TRNCLINDQMVVKIADFGLSRKMYLQDY--YKGDENDAIPVRWMPLESILYNKYTVESDV 573
RNC+++++ VK+ADFGL+R MY +++ +PV+WM LES+ K+T +SDV
Sbjct: 161 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 220
Query: 574 WAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMN 633
W+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K
Sbjct: 221 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEM 280
Query: 634 RPSFRTIYQTLWNI 647
RPSF + + I
Sbjct: 281 RPSFSELVSRISAI 294
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 164/302 (54%), Gaps = 36/302 (11%)
Query: 360 LEFPRN-DIIYVRD---LGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQT 413
+EF + D+ YV+ +G G FG V + KAPG K E + VA+K LK +E +
Sbjct: 5 MEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPG--KKE--SCVAIKTLKGGYTERQRR 60
Query: 414 DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS 473
+F EA ++ +F+HPNI++L GV P+ +L E+M G L+ FLR+
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--------- 111
Query: 474 SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
Q + L+ + IASGM YL++ +VHRDLA RN L+N +V K++DFG
Sbjct: 112 ----------QFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFG 161
Query: 534 LSRKMYLQD-----YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFAL 588
LSR +L++ Y IP+RW E+I + K+T SD W++G+ +WE+ SF
Sbjct: 162 LSR--FLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE 219
Query: 589 QPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
+PY+ +++++V+ I++ L P + P +L+ LM CW RP F + L +
Sbjct: 220 RPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279
Query: 649 RD 650
R+
Sbjct: 280 RN 281
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 150/289 (51%), Gaps = 27/289 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEE--FTLVAVKMLKDEASEYLQTDFERE 418
E R I R +G+G FG V Q G+ E VA+K K+ S+ ++ F +E
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQ----GIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 61
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
A + +FDHP+IVKL+GV P+ ++ E G+L FL++
Sbjct: 62 ALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV----------------- 103
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
R L LI A Q+++ + YL ++FVHRD+A RN L++ VK+ DFGLSR M
Sbjct: 104 --RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 161
Query: 539 YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598
YYK + +P++WM ESI + ++T SDVW FGVC+WEI ++P+ G+ + +
Sbjct: 162 EDSTYYKASKGK-LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
Query: 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
V+ I+ G L P N P LY LM CW P RP F + L I
Sbjct: 221 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 170/314 (54%), Gaps = 34/314 (10%)
Query: 345 SYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL- 397
+ H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ +
Sbjct: 3 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIH 59
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDL 455
AVK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GDL
Sbjct: 60 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDL 118
Query: 456 NDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515
+F+R N T++ + DLI LQ+A GM YL+ +KFVHRDLA
Sbjct: 119 RNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKYLASKKFVHRDLA 159
Query: 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNKYTVESDV 573
RNC+++++ VK+ADFGL+R MY ++ +PV+WM LES+ K+T +SDV
Sbjct: 160 ARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 219
Query: 574 WAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMN 633
W+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K
Sbjct: 220 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEM 279
Query: 634 RPSFRTIYQTLWNI 647
RPSF + + I
Sbjct: 280 RPSFSELVSRISAI 293
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 171/314 (54%), Gaps = 34/314 (10%)
Query: 345 SYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL- 397
+ H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ +
Sbjct: 2 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIH 58
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDL 455
AVK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GDL
Sbjct: 59 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDL 117
Query: 456 NDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515
+F+R N T++ + DLI LQ+A GM +L+ +KFVHRDLA
Sbjct: 118 RNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKFLASKKFVHRDLA 158
Query: 516 TRNCLINDQMVVKIADFGLSRKMYLQDY--YKGDENDAIPVRWMPLESILYNKYTVESDV 573
RNC+++++ VK+ADFGL+R MY +++ +PV+WM LES+ K+T +SDV
Sbjct: 159 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 218
Query: 574 WAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMN 633
W+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K
Sbjct: 219 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEM 278
Query: 634 RPSFRTIYQTLWNI 647
RPSF + + I
Sbjct: 279 RPSFSELVSRISAI 292
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 152/287 (52%), Gaps = 28/287 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E D+ ++++LG G FG V K G VA+KM+K+ + + +F EA
Sbjct: 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMS--EDEFIEEAK 71
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ H +V+L GVC +P+ ++ EYM G L ++LR H
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----------------H 115
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R T L+ + + M YL ++F+HRDLA RNCL+NDQ VVK++DFGLSR + L
Sbjct: 116 R---FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-L 171
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
D PVRW P E ++Y+K++ +SD+WAFGV +WEI+S PY T+ E
Sbjct: 172 DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
++I +G L P + +Y +M CW+ K RP+F+ + + ++
Sbjct: 232 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 278
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 170/314 (54%), Gaps = 34/314 (10%)
Query: 345 SYHQTDARLNPKLEQ-----LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTL- 397
+ H + LNP+L Q + P + I++ + +G+G FG V+ LL ++ +
Sbjct: 5 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGT---LLDNDGKKIH 61
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDL 455
AVK L + F E ++ +F HPN++ LLG+C + G P+ +L YM GDL
Sbjct: 62 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDL 120
Query: 456 NDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515
+F+R N T++ + DLI LQ+A GM +L+ +KFVHRDLA
Sbjct: 121 RNFIR--------NETHNP-----------TVKDLIGFGLQVAKGMKFLASKKFVHRDLA 161
Query: 516 TRNCLINDQMVVKIADFGLSRKMYLQDY--YKGDENDAIPVRWMPLESILYNKYTVESDV 573
RNC+++++ VK+ADFGL+R M +++ +PV+WM LES+ K+T +SDV
Sbjct: 162 ARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDV 221
Query: 574 WAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMN 633
W+FGV LWE+ + PY + ++ Y+ +G L P+ PD LY++M CW+ K
Sbjct: 222 WSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEM 281
Query: 634 RPSFRTIYQTLWNI 647
RPSF + + I
Sbjct: 282 RPSFSELVSRISAI 295
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 165/308 (53%), Gaps = 36/308 (11%)
Query: 354 NPKLEQLEFPRN-DIIYVRD---LGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEA 407
+P EF + D+ YV+ +G G FG V + KAPG K E + VA+K LK
Sbjct: 1 DPNEAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPG--KKE--SCVAIKTLKGGY 56
Query: 408 SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNY 467
+E + +F EA ++ +F+HPNI++L GV P+ +L E+M G L+ FLR+
Sbjct: 57 TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG--- 113
Query: 468 INGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
Q + L+ + IASGM YL++ +VHRDLA RN L+N +V
Sbjct: 114 ----------------QFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVC 157
Query: 528 KIADFGLSRKMYLQDYYKGDENDA-----IPVRWMPLESILYNKYTVESDVWAFGVCLWE 582
K++DFGLSR +L++ + IP+RW E+I + K+T SD W++G+ +WE
Sbjct: 158 KVSDFGLSR--FLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWE 215
Query: 583 IFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
+ SF +PY+ +++++V+ I++ L P + P +L+ LM CW RP F +
Sbjct: 216 VMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVS 275
Query: 643 TLWNIKRD 650
L + R+
Sbjct: 276 ALDKMIRN 283
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 160/296 (54%), Gaps = 31/296 (10%)
Query: 344 ASYHQTDARLNPKLE-QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKM 402
S+ QT P E + E PR + V LG G FG V+ G T VAVK
Sbjct: 1 GSHMQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKS 54
Query: 403 LKDEASEYLQTD-FEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRI 461
LK + + D F EA L+ + H +V+L V +P+ ++ EYM G L DFL+
Sbjct: 55 LKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK- 109
Query: 462 CSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521
T S ++ +I++ L+ +A QIA GM ++ +R ++HRDL N L+
Sbjct: 110 ---------TPSGIKLTINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILV 152
Query: 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLW 581
+D + KIADFGL+R + + Y E P++W E+I Y +T++SDVW+FG+ L
Sbjct: 153 SDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 211
Query: 582 EIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
EI + PY G+T+ EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 212 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 267
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 148/289 (51%), Gaps = 27/289 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEE--FTLVAVKMLKDEASEYLQTDFERE 418
E R I R +G+G FG V Q G+ E VA+K K+ S+ ++ F +E
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQ----GIYMSPENPAMAVAIKTCKNCTSDSVREKFLQE 61
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
A + +FDHP+IVKL+GV P+ ++ E G+L FL++
Sbjct: 62 ALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV----------------- 103
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
R L LI A Q+++ + YL ++FVHRD+A RN L++ VK+ DFGLSR M
Sbjct: 104 --RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 539 YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598
K + +P++WM ESI + ++T SDVW FGVC+WEI ++P+ G+ + +
Sbjct: 162 EDSTXXKASKGK-LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
Query: 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
V+ I+ G L P N P LY LM CW P RP F + L I
Sbjct: 221 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 167/337 (49%), Gaps = 50/337 (14%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
EF R + + LG+GAFG+V QA A G+ K VAVKMLK+ A+ E
Sbjct: 23 EFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELK 82
Query: 421 LLAEFDHP-NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS----- 473
+L H N+V LLG C G P+ ++ EY G+L+++L+ ++N +
Sbjct: 83 ILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEP 142
Query: 474 ---SMESSIH--RVPQLSTC-------------------------------------DLI 491
ME + + P+L + DLI
Sbjct: 143 KKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLI 202
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDA 551
+ + Q+A GM +LS RK +HRDLA RN L+++ VVKI DFGL+R +Y Y +
Sbjct: 203 SYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTR 262
Query: 552 IPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT-HEEVVKYIKEGNILQ 610
+P++WM ESI Y+ +SDVW++GV LWEIFS PY G+ E+ ++EG ++
Sbjct: 263 LPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMR 322
Query: 611 APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
AP+ + +Y +M CW+ P RP F + + L ++
Sbjct: 323 APEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 155/281 (55%), Gaps = 30/281 (10%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FE 416
++ E PR + V LG G FG V+ G T VAVK LK + + D F
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGS---MSPDAFL 61
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
EA L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++
Sbjct: 62 AEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIK 110
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+I++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 111 LTINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 162
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+ + Y E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+
Sbjct: 163 -LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 221
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 222 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 262
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 155/281 (55%), Gaps = 30/281 (10%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FE 416
++ E PR + V LG G FG V+ G T VAVK LK + + D F
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGS---MSPDAFL 62
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
EA L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++
Sbjct: 63 AEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIK 111
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+I++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 112 LTINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+ + Y E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+
Sbjct: 164 -LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 222
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 223 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 263
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 162/298 (54%), Gaps = 30/298 (10%)
Query: 350 DARLNPKLEQLEFPRNDIIYVRD--LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA 407
D+ L +++ + P ++ D +G+G FG V+ + + + + A+K L
Sbjct: 4 DSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEY--IDQAQNRIQCAIKSLS-RI 60
Query: 408 SEYLQTD-FEREACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSP 464
+E Q + F RE L+ +HPN++ L+G+ G P LL YM GDL F+R
Sbjct: 61 TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQR 119
Query: 465 NNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524
N + DLI+ LQ+A GM YL+++KFVHRDLA RNC++++
Sbjct: 120 NPTVK-------------------DLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDES 160
Query: 525 MVVKIADFGLSRKMYLQDYY--KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWE 582
VK+ADFGL+R + ++YY + + +PV+W LES+ ++T +SDVW+FGV LWE
Sbjct: 161 FTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWE 220
Query: 583 IFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
+ + PY + ++ ++ +G L P+ PD+LY +M+ CW P RP+FR +
Sbjct: 221 LLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVL 278
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 153/280 (54%), Gaps = 28/280 (10%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E PR + V LG G FG V+ G T VAVK LK + F
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMS--PDAFLA 52
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++
Sbjct: 53 EANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK----------TPSGIKL 101
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+I++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 102 TINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR- 152
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+ + Y E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+
Sbjct: 153 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 212
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 213 EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 252
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 153/280 (54%), Gaps = 28/280 (10%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E PR + V LG G FG V+ G T VAVK LK + F
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMS--PDAFLA 57
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++
Sbjct: 58 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIKL 106
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+I++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 107 TINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR- 157
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+ + Y E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+
Sbjct: 158 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 218 EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 23/289 (7%)
Query: 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFERE 418
Q R D++ R LG+G FG V++ K E+ VAVK K + + + F E
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNH-KGEKIN-VAVKTCKKDCTLDNKEKFMSE 75
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
A ++ DHP+IVKL+G+ +P ++ E G+L +L
Sbjct: 76 AVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLE------------------ 116
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
L L+ +LQI M YL VHRD+A RN L+ VK+ DFGLSR +
Sbjct: 117 -RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 175
Query: 539 YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598
+DYYK +P++WM ESI + ++T SDVW F VC+WEI SF QP++ L +++
Sbjct: 176 EDEDYYKASVT-RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 234
Query: 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
V+ +++G+ L PD P LY LM CW+ P +RP F + +L ++
Sbjct: 235 VIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 23/289 (7%)
Query: 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFERE 418
Q R D++ R LG+G FG V++ K E+ VAVK K + + + F E
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNH-KGEKIN-VAVKTCKKDCTLDNKEKFMSE 63
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
A ++ DHP+IVKL+G+ +P ++ E G+L +L
Sbjct: 64 AVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLE------------------ 104
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
L L+ +LQI M YL VHRD+A RN L+ VK+ DFGLSR +
Sbjct: 105 -RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163
Query: 539 YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598
+DYYK +P++WM ESI + ++T SDVW F VC+WEI SF QP++ L +++
Sbjct: 164 EDEDYYKASVT-RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 222
Query: 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
V+ +++G+ L PD P LY LM CW+ P +RP F + +L ++
Sbjct: 223 VIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/289 (34%), Positives = 149/289 (51%), Gaps = 23/289 (7%)
Query: 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFERE 418
Q R D++ R LG+G FG V++ K E+ VAVK K + + + F E
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNH-KGEKIN-VAVKTCKKDCTLDNKEKFMSE 59
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
A ++ DHP+IVKL+G+ +P ++ E G+L +L
Sbjct: 60 AVIMKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLE------------------ 100
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
L L+ +LQI M YL VHRD+A RN L+ VK+ DFGLSR +
Sbjct: 101 -RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 159
Query: 539 YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598
+DYYK +P++WM ESI + ++T SDVW F VC+WEI SF QP++ L +++
Sbjct: 160 EDEDYYKASVT-RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 218
Query: 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
V+ +++G+ L PD P LY LM CW+ P +RP F + +L ++
Sbjct: 219 VIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 147/286 (51%), Gaps = 28/286 (9%)
Query: 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFERE 418
+E R +I +++LG G FG V K G VAVKM+K+ + + +F +E
Sbjct: 2 HMELKREEITLLKELGSGQFGVVKLGKWKGQYD------VAVKMIKEGSMS--EDEFFQE 53
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
A + + HP +VK GVC+ P+ ++ EY+ G L ++LR
Sbjct: 54 AQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG------------- 100
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
L L+ + + GM +L +F+HRDLA RNCL++ + VK++DFG++R +
Sbjct: 101 ------LEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV 154
Query: 539 YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598
L D Y PV+W E Y KY+ +SDVWAFG+ +WE+FS PY T+ E
Sbjct: 155 -LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213
Query: 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
VV + +G+ L P D +Y +M CW+ P RP+F+ + ++
Sbjct: 214 VVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSI 259
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 151/277 (54%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + V LG G FG V+ G T VAVK LK + F EA
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMS--PDAFLAEAN 56
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++ +I+
Sbjct: 57 LMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIKLTIN 105
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
+ L+ +A QIA GM ++ +R ++HR+L N L++D + KIADFGL+R +
Sbjct: 106 K--------LLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLAR-LIE 156
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+ EV+
Sbjct: 157 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 217 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 253
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 154/281 (54%), Gaps = 30/281 (10%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FE 416
++ E PR + V LG G FG V+ G T VAVK LK + + D F
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGS---MSPDAFL 64
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
EA L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++
Sbjct: 65 AEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIK 113
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+I++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 114 LTINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 165
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+ + E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+
Sbjct: 166 -LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 224
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 225 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 154/281 (54%), Gaps = 30/281 (10%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FE 416
++ E PR + V LG G FG V+ G T VAVK LK + + D F
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGS---MSPDAFL 62
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
EA L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++
Sbjct: 63 AEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIK 111
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+I++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 112 LTINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+ + E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+
Sbjct: 164 -LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 222
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 223 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 263
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 154/281 (54%), Gaps = 30/281 (10%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FE 416
++ E PR + V LG G FG V+ G T VAVK LK + + D F
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGS---MSPDAFL 56
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
EA L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++
Sbjct: 57 AEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIK 105
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+I++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 106 LTINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+ + E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+
Sbjct: 158 -LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 217 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 151/287 (52%), Gaps = 36/287 (12%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL----VAVKMLKDEASEYLQTDFEREAC 420
+++ +V+++G G FG L H + L VA+K +++ A + DF EA
Sbjct: 7 SELTFVQEIGSGQFG----------LVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAE 54
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + HP +V+L GVC P+CL+FE+M G L+D+LR G +++
Sbjct: 55 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ------RGLFAAE----- 103
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
L+ + L + GM YL + +HRDLA RNCL+ + V+K++DFG++R L
Sbjct: 104 --------TLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTR-FVL 154
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
D Y PV+W E +++Y+ +SDVW+FGV +WE+FS PY ++ EVV
Sbjct: 155 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ I G L P +Y +M CW +P +RP+F + + L I
Sbjct: 215 EDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 156/288 (54%), Gaps = 30/288 (10%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FE 416
++ E PR + V LG G FG V+ G T VAVK LK + + D F
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGS---MSPDAFL 58
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
EA L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++
Sbjct: 59 AEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIK 107
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+I++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 108 LTINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 159
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+ + E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+
Sbjct: 160 -LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 218
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F + L
Sbjct: 219 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 156/288 (54%), Gaps = 30/288 (10%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FE 416
++ E PR + V LG G FG V+ G T VAVK LK + + D F
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGS---MSPDAFL 65
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
EA L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++
Sbjct: 66 AEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIK 114
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+I++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 115 LTINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 166
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+ + E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+
Sbjct: 167 -LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 225
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F + L
Sbjct: 226 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 273
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 154/281 (54%), Gaps = 30/281 (10%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FE 416
++ E PR + V LG G FG V+ G T VAVK LK + + D F
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGS---MSPDAFL 57
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
EA L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++
Sbjct: 58 AEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIK 106
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+I++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 107 LTINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 158
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+ + E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+
Sbjct: 159 -LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 217
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 218 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 258
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 152/280 (54%), Gaps = 28/280 (10%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
++ E PR + V LG G FG V+ G T VAVK LK + F
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMS--PDAFLA 57
Query: 418 EACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
EA L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++
Sbjct: 58 EANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIKL 106
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+I++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 107 TINK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR- 157
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+ + E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+
Sbjct: 158 LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
EV++ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 218 EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 151/287 (52%), Gaps = 36/287 (12%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL----VAVKMLKDEASEYLQTDFEREAC 420
+++ +V+++G G FG L H + L VA+K +++ A + DF EA
Sbjct: 7 SELTFVQEIGSGQFG----------LVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAE 54
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + HP +V+L GVC P+CL+FE+M G L+D+LR G +++
Sbjct: 55 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT------QRGLFAAE----- 103
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
L+ + L + GM YL + +HRDLA RNCL+ + V+K++DFG++R L
Sbjct: 104 --------TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVL 154
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
D Y PV+W E +++Y+ +SDVW+FGV +WE+FS PY ++ EVV
Sbjct: 155 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 214
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ I G L P +Y +M CW +P +RP+F + + L I
Sbjct: 215 EDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 149/283 (52%), Gaps = 28/283 (9%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
+++ +V+++G G FG V K VA+K +++ A + DF EA ++ +
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDK------VAIKTIREGAMS--EEDFIEEAEVMMK 56
Query: 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
HP +V+L GVC P+CL+FE+M G L+D+LR G +++
Sbjct: 57 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ------RGLFAAE--------- 101
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
L+ + L + GM YL + +HRDLA RNCL+ + V+K++DFG++R L D Y
Sbjct: 102 ----TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQY 156
Query: 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
PV+W E +++Y+ +SDVW+FGV +WE+FS PY ++ EVV+ I
Sbjct: 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 216
Query: 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
G L P +Y +M CW +P +RP+F + + L I
Sbjct: 217 TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 151/287 (52%), Gaps = 36/287 (12%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL----VAVKMLKDEASEYLQTDFEREAC 420
+++ +V+++G G FG L H + L VA+K +++ A + DF EA
Sbjct: 10 SELTFVQEIGSGQFG----------LVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAE 57
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + HP +V+L GVC P+CL+FE+M G L+D+LR G +++
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT------QRGLFAAE----- 106
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
L+ + L + GM YL + +HRDLA RNCL+ + V+K++DFG++R L
Sbjct: 107 --------TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVL 157
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
D Y PV+W E +++Y+ +SDVW+FGV +WE+FS PY ++ EVV
Sbjct: 158 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 217
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ I G L P +Y +M CW +P +RP+F + + L I
Sbjct: 218 EDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 151/287 (52%), Gaps = 36/287 (12%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL----VAVKMLKDEASEYLQTDFEREAC 420
+++ +V+++G G FG V H + L VA+K +K+ + + DF EA
Sbjct: 27 SELTFVQEIGSGQFGLV----------HLGYWLNKDKVAIKTIKEGSMS--EDDFIEEAE 74
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + HP +V+L GVC P+CL+FE+M G L+D+LR G +++
Sbjct: 75 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ------RGLFAAE----- 123
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
L+ + L + GM YL + +HRDLA RNCL+ + V+K++DFG++R L
Sbjct: 124 --------TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVL 174
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
D Y PV+W E +++Y+ +SDVW+FGV +WE+FS PY ++ EVV
Sbjct: 175 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 234
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ I G L P +Y +M CW +P +RP+F + + L I
Sbjct: 235 EDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 150/284 (52%), Gaps = 28/284 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + + LG G FG V+ A + + T VAVK +K + F EA
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMAT------YNKHTKVAVKTMKPGSMSV--EAFLAEAN 62
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ H +VKL V +P+ ++ E+M +G L DFL+ S E S
Sbjct: 63 VMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLK-------------SDEGSKQ 108
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
+P+L I + QIA GM ++ R ++HRDL N L++ +V KIADFGL+R +
Sbjct: 109 PLPKL-----IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR-VIE 162
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y E P++W E+I + +T++SDVW+FG+ L EI ++ PY G+++ EV+
Sbjct: 163 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ ++ G + P+N P+ LY++M CW +P RP+F I L
Sbjct: 223 RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 150/284 (52%), Gaps = 28/284 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + + LG G FG V+ A + + T VAVK +K + F EA
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMAT------YNKHTKVAVKTMKPGSMSV--EAFLAEAN 235
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ H +VKL V +P+ ++ E+M +G L DFL+ S E S
Sbjct: 236 VMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLK-------------SDEGSKQ 281
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
+P+L I + QIA GM ++ R ++HRDL N L++ +V KIADFGL+R +
Sbjct: 282 PLPKL-----IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR-VIE 335
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y E P++W E+I + +T++SDVW+FG+ L EI ++ PY G+++ EV+
Sbjct: 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ ++ G + P+N P+ LY++M CW +P RP+F I L
Sbjct: 396 RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 150/284 (52%), Gaps = 27/284 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR I V+ LG G FG V+ + T VAVK LK + +Q F EA
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGY------YNNSTKVAVKTLK-PGTMSVQA-FLEEAN 60
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
L+ H +V+L V +P+ ++ EYM +G L DFL+ S E
Sbjct: 61 LMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLK-------------SDEGGKV 107
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
+P+L I + QIA GM Y+ + ++HRDL N L+++ ++ KIADFGL+R +
Sbjct: 108 LLPKL-----IDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLAR-VIE 161
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y E P++W E+I + +T++SDVW+FG+ L+EI ++ PY G T+ +V+
Sbjct: 162 DNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM 221
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +G + +N PD LYD+MK+CW K RP+F + L
Sbjct: 222 TALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 265
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 152/279 (54%), Gaps = 32/279 (11%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FEREA 419
E PR + V LG G G V+ G T VAVK LK + + D F EA
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNG------HTKVAVKSLKQGS---MSPDAFLAEA 59
Query: 420 CLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
L+ + H +V+L V +P+ ++ EYM G L DFL+ T S ++ +I
Sbjct: 60 NLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLK----------TPSGIKLTI 108
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
++ L+ +A QIA GM ++ +R ++HRDL N L++D + KIADFGL+R
Sbjct: 109 NK--------LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR--L 158
Query: 540 LQDY-YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598
++D E P++W E+I Y +T++SDVW+FG+ L EI + PY G+T+ E
Sbjct: 159 IEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE 218
Query: 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
V++ ++ G + PDN P+ LY LM+LCW +P +RP+F
Sbjct: 219 VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 150/287 (52%), Gaps = 36/287 (12%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL----VAVKMLKDEASEYLQTDFEREAC 420
+++ +V+++G G FG L H + L VA+K +++ A + DF EA
Sbjct: 8 SELTFVQEIGSGQFG----------LVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAE 55
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + HP +V+L GVC P+CL+ E+M G L+D+LR G +++
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRT------QRGLFAAE----- 104
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
L+ + L + GM YL + +HRDLA RNCL+ + V+K++DFG++R L
Sbjct: 105 --------TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR-FVL 155
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
D Y PV+W E +++Y+ +SDVW+FGV +WE+FS PY ++ EVV
Sbjct: 156 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV 215
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ I G L P +Y +M CW +P +RP+F + + L I
Sbjct: 216 EDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 150/284 (52%), Gaps = 27/284 (9%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR I V+ LG G FG V+ + T VAVK LK + +Q F EA
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGY------YNNSTKVAVKTLKP-GTMSVQA-FLEEAN 59
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
L+ H +V+L V +P+ ++ E+M +G L DFL+ S E
Sbjct: 60 LMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLK-------------SDEGGKV 106
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
+P+L I + QIA GM Y+ + ++HRDL N L+++ ++ KIADFGL+R +
Sbjct: 107 LLPKL-----IDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIE- 160
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y E P++W E+I + +T++S+VW+FG+ L+EI ++ PY G T+ +V+
Sbjct: 161 DNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVM 220
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +G + +N PD LYD+MK+CW K RP+F + L
Sbjct: 221 SALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 264
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 13 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 65
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 66 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGXLLDYVREHKDN--IGSQY--- 119
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 120 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 166 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 226 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 280
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 157/295 (53%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 15 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 67
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 68 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 121
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 122 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 168 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M+ CW + +RP FR + + RD
Sbjct: 228 ASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 282
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 22 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 74
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + L+ + M G L D++R N I Y
Sbjct: 75 LDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQY--- 128
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 129 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 175 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 234
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M+ CW + +RP FR + + RD
Sbjct: 235 ASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 289
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 157/295 (53%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 12 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 65 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 118
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 119 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M+ CW + +RP FR + + RD
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 146/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLK--PGTMSPEAFLQEAQ 314
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 315 VMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK-GETGKYL------------ 360
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 361 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 414
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 474
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW +P RP+F
Sbjct: 475 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 511
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 12 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 65 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGXLLDYVREHKDN--IGSQY--- 118
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 119 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 155/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 16 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 68
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + L+ + M G L D++R N I Y
Sbjct: 69 LDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDN--IGSQY--- 122
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 123 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 169 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 228
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 229 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 283
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 14 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 66
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 67 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQY--- 120
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 121 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 167 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 227 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 281
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 15 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 67
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 68 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQY--- 121
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 122 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 168 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 228 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 282
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 13 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 65
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 66 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQY--- 119
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 120 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 166 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 225
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 226 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 280
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 146/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLK--PGTMSPEAFLQEAQ 231
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 232 VMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK-GETGKYL------------ 277
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 278 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 331
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW +P RP+F
Sbjct: 392 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 162/313 (51%), Gaps = 35/313 (11%)
Query: 341 PCNASYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL--- 397
P + +Q R+ L++ E R V+ LG GAFG V++ G+ E T+
Sbjct: 22 PSGTAPNQAQLRI---LKETELKR-----VKVLGSGAFGTVYK----GIWVPEGETVKIP 69
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLND 457
VA+K+L + +F EA ++A DHP++V+LLGVC + + L+ + M G L +
Sbjct: 70 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVC-LSPTIQLVTQLMPHGCLLE 128
Query: 458 FLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517
Y++ ++ S + L+ +QIA GM+YL +R+ VHRDLA R
Sbjct: 129 ---------YVHEHKDNIGSQL----------LLNWCVQIAKGMMYLEERRLVHRDLAAR 169
Query: 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFG 577
N L+ VKI DFGL+R + + + +P++WM LE I Y K+T +SDVW++G
Sbjct: 170 NVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYG 229
Query: 578 VCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
V +WE+ +F +PY G+ E+ +++G L P +Y +M CW + +RP F
Sbjct: 230 VTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKF 289
Query: 638 RTIYQTLWNIKRD 650
+ + + RD
Sbjct: 290 KELAAEFSRMARD 302
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 12 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 65 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQY--- 118
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 119 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 146/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQ 65
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 66 VMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK-GEMGKYL------------ 111
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDLA N L+ + +V K+ADFGL+R +
Sbjct: 112 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLAR-LIE 165
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW P RP+F
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 146/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQ 231
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 232 VMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK-GETGKYL------------ 277
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 278 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 331
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW +P RP+F
Sbjct: 392 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 14 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 66
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 67 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 120
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 121 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 167 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 227 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 281
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 146/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLK--PGTMSPEAFLQEAQ 231
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 232 VMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLK-GETGKYL------------ 277
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 278 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 331
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW +P RP+F
Sbjct: 392 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 428
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 146/284 (51%), Gaps = 38/284 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + + LG G FG V+ A + + T VAVK +K + F EA
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMAT------YNKHTKVAVKTMKPGSMSV--EAFLAEAN 229
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ H +VKL V +P+ ++ E+M +G L DFL+ S E S
Sbjct: 230 VMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLK-------------SDEGSKQ 275
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
+P+L I + QIA GM ++ R ++HRDL N L++ +V KIADFGL+R
Sbjct: 276 PLPKL-----IDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV--- 327
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
P++W E+I + +T++SDVW+FG+ L EI ++ PY G+++ EV+
Sbjct: 328 --------GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ ++ G + P+N P+ LY++M CW +P RP+F I L
Sbjct: 380 RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 14 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 66
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 67 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQY--- 120
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFG +
Sbjct: 121 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 167 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M+ CW + +RP FR + + RD
Sbjct: 227 ASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 281
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 18 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 70
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 71 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 124
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 125 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 171 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 230
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 231 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 285
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 19 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 71
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 72 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 125
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 126 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 172 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 232 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 286
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 15 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 67
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 68 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 121
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 122 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 168 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 228 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 282
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 15 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 67
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 68 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 121
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 122 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 168 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 227
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 228 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 282
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 9 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 61
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 62 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 115
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 116 --------------LLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 162 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 221
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 222 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 276
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 6 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 58
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 59 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 112
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 113 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 159 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 218
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 219 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 155/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 37 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 89
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + L+ + M G L D++R N I Y
Sbjct: 90 LDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDN--IGSQY--- 143
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 144 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 190 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 249
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 250 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 304
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 12 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 65 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 118
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 119 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 146/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQ 58
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 59 VMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK-GETGKYL------------ 104
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 105 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 158
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 159 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 218
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW +P RP+F
Sbjct: 219 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 255
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 151/285 (52%), Gaps = 26/285 (9%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPN 429
++LG G FG V K + VAVK+LK+EA++ L+ + EA ++ + D+P
Sbjct: 375 KELGSGNFGTV---KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 431
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+++G+C M L+ E G LN +L+ N ++ +
Sbjct: 432 IVRMIGICEAESWM-LVMEMAELGPLNKYLQ---QNRHVKDK-----------------N 470
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGDE 548
+I + Q++ GM YL + FVHRDLA RN L+ Q KI+DFGLS+ + ++YYK
Sbjct: 471 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+ PV+W E I Y K++ +SDVW+FGV +WE FS+ +PY G+ EV +++G
Sbjct: 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 590
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
+ P P +YDLM LCW NRP F + L N D+ N
Sbjct: 591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 635
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 151/285 (52%), Gaps = 26/285 (9%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPN 429
++LG G FG V K + VAVK+LK+EA++ L+ + EA ++ + D+P
Sbjct: 376 KELGSGNFGTV---KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 432
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+++G+C M L+ E G LN +L+ N ++ +
Sbjct: 433 IVRMIGICEAESWM-LVMEMAELGPLNKYLQ---QNRHVKDK-----------------N 471
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGDE 548
+I + Q++ GM YL + FVHRDLA RN L+ Q KI+DFGLS+ + ++YYK
Sbjct: 472 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 531
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+ PV+W E I Y K++ +SDVW+FGV +WE FS+ +PY G+ EV +++G
Sbjct: 532 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 591
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
+ P P +YDLM LCW NRP F + L N D+ N
Sbjct: 592 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 636
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 156/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 14 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 66
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 67 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 120
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFG +
Sbjct: 121 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 167 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M+ CW + +RP FR + + RD
Sbjct: 227 ASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 281
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 151/285 (52%), Gaps = 34/285 (11%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
++ ++ +G+G FG V G VAVK +K++A+ F EA ++ +
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDAT---AQAFLAEASVMTQ 242
Query: 425 FDHPNIVKLLGVCAVGKP-MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
H N+V+LLGV K + ++ EYM +G L D+LR S R
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----------------SRGRSV 285
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
C L+ +L + M YL FVHRDLA RN L+++ V K++DFGL++ +
Sbjct: 286 LGGDC-LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EA 339
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ +PV+W E++ K++ +SDVW+FG+ LWEI+SF PY + ++VV +
Sbjct: 340 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 399
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
++G + APD P A+YD+MK CW++ RP+F + + L +I+
Sbjct: 400 EKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 151/285 (52%), Gaps = 26/285 (9%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPN 429
++LG G FG V K + VAVK+LK+EA++ L+ + EA ++ + D+P
Sbjct: 31 KELGSGNFGTV---KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 87
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+++G+C M L+ E G LN +L+ N ++ +
Sbjct: 88 IVRMIGICEAESWM-LVMEMAELGPLNKYLQ---QNRHVKDK-----------------N 126
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGDE 548
+I + Q++ GM YL + FVHRDLA RN L+ Q KI+DFGLS+ + ++YYK
Sbjct: 127 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 186
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+ PV+W E I Y K++ +SDVW+FGV +WE FS+ +PY G+ EV +++G
Sbjct: 187 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 246
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
+ P P +YDLM LCW NRP F + L N D+ N
Sbjct: 247 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 291
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 145/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQ 65
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 66 VMKKLRHEKLVQLYAVVS-EEPIYIVIEYMSKGSLLDFLK-GEMGKYL------------ 111
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 112 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 165
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW P RP+F
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 144/277 (51%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLK--PGNMSPEAFLQEAQ 232
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 233 VMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK-GEMGKYL------------ 278
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL R +
Sbjct: 279 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGR-LIE 332
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 333 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 392
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW P RP+F
Sbjct: 393 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 429
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 151/285 (52%), Gaps = 26/285 (9%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPN 429
++LG G FG V K + VAVK+LK+EA++ L+ + EA ++ + D+P
Sbjct: 33 KELGSGNFGTV---KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 89
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+++G+C M L+ E G LN +L+ N ++ +
Sbjct: 90 IVRMIGICEAESWM-LVMEMAELGPLNKYLQ---QNRHVKDK-----------------N 128
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGDE 548
+I + Q++ GM YL + FVHRDLA RN L+ Q KI+DFGLS+ + ++YYK
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+ PV+W E I Y K++ +SDVW+FGV +WE FS+ +PY G+ EV +++G
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 248
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
+ P P +YDLM LCW NRP F + L N D+ N
Sbjct: 249 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 293
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 151/285 (52%), Gaps = 26/285 (9%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPN 429
++LG G FG V K + VAVK+LK+EA++ L+ + EA ++ + D+P
Sbjct: 33 KELGSGNFGTV---KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 89
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+++G+C M L+ E G LN +L+ N ++ +
Sbjct: 90 IVRMIGICEAESWM-LVMEMAELGPLNKYLQ---QNRHVKDK-----------------N 128
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGDE 548
+I + Q++ GM YL + FVHRDLA RN L+ Q KI+DFGLS+ + ++YYK
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+ PV+W E I Y K++ +SDVW+FGV +WE FS+ +PY G+ EV +++G
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 248
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
+ P P +YDLM LCW NRP F + L N D+ N
Sbjct: 249 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 293
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 151/285 (52%), Gaps = 26/285 (9%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPN 429
++LG G FG V K + VAVK+LK+EA++ L+ + EA ++ + D+P
Sbjct: 23 KELGSGNFGTV---KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 79
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+++G+C M L+ E G LN +L+ N ++ +
Sbjct: 80 IVRMIGICEAESWM-LVMEMAELGPLNKYLQ---QNRHVKDK-----------------N 118
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGDE 548
+I + Q++ GM YL + FVHRDLA RN L+ Q KI+DFGLS+ + ++YYK
Sbjct: 119 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 178
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+ PV+W E I Y K++ +SDVW+FGV +WE FS+ +PY G+ EV +++G
Sbjct: 179 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 238
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
+ P P +YDLM LCW NRP F + L N D+ N
Sbjct: 239 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 151/285 (52%), Gaps = 26/285 (9%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPN 429
++LG G FG V K + VAVK+LK+EA++ L+ + EA ++ + D+P
Sbjct: 13 KELGSGNFGTV---KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+++G+C M L+ E G LN +L+ N ++ +
Sbjct: 70 IVRMIGICEAESWM-LVMEMAELGPLNKYLQ---QNRHVKDK-----------------N 108
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGDE 548
+I + Q++ GM YL + FVHRDLA RN L+ Q KI+DFGLS+ + ++YYK
Sbjct: 109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+ PV+W E I Y K++ +SDVW+FGV +WE FS+ +PY G+ EV +++G
Sbjct: 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 228
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
+ P P +YDLM LCW NRP F + L N D+ N
Sbjct: 229 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 273
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 169/326 (51%), Gaps = 30/326 (9%)
Query: 325 YAPAPSQDVNIDLSK-LPCNASYHQTDARLNPKLEQLE-FPRNDIIYVRD--LGQGAFGR 380
Y P P++ + D + +P + S ++ +L+ + F + D + + D LG G FG
Sbjct: 292 YTPEPARITSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGS 351
Query: 381 VFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV 439
V Q G+ + + + VA+K+LK + + REA ++ + D+P IV+L+GVC
Sbjct: 352 VRQ----GVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA 407
Query: 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIAS 499
+ + L+ E G G L+ FL + + ++ ++ + Q++
Sbjct: 408 -EALMLVMEMAGGGPLHKFL-------------------VGKREEIPVSNVAELLHQVSM 447
Query: 500 GMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD-YYKGDENDAIPVRWMP 558
GM YL ++ FVHR+LA RN L+ ++ KI+DFGLS+ + D YY P++W
Sbjct: 448 GMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 507
Query: 559 LESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDA 618
E I + K++ SDVW++GV +WE S+ +PY + EV+ +I++G ++ P P
Sbjct: 508 PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPE 567
Query: 619 LYDLMKLCWNMKPMNRPSFRTIYQTL 644
LY LM CW K +RP F T+ Q +
Sbjct: 568 LYALMSDCWIYKWEDRPDFLTVEQRM 593
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 151/285 (52%), Gaps = 26/285 (9%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPN 429
++LG G FG V K + VAVK+LK+EA++ L+ + EA ++ + D+P
Sbjct: 11 KELGSGNFGTV---KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 67
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+++G+C M L+ E G LN +L+ N ++ +
Sbjct: 68 IVRMIGICEAESWM-LVMEMAELGPLNKYLQ---QNRHVKDK-----------------N 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGDE 548
+I + Q++ GM YL + FVHRDLA RN L+ Q KI+DFGLS+ + ++YYK
Sbjct: 107 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 166
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+ PV+W E I Y K++ +SDVW+FGV +WE FS+ +PY G+ EV +++G
Sbjct: 167 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 226
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
+ P P +YDLM LCW NRP F + L N D+ N
Sbjct: 227 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 271
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 14 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 66
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 67 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQY--- 120
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFG +
Sbjct: 121 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 166
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 167 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 226
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 227 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 281
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ L GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 19 LKETEFKK-----IKVLSSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 71
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 72 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQY--- 125
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 126 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 172 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 232 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 286
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 146/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLK--PGTMSPEAFLQEAQ 62
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 63 VMKKLRHEKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLK-GETGKYL------------ 108
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + ++ QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 109 RLPQL-----VDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 162
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 163 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 222
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW +P RP+F
Sbjct: 223 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 259
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 151/285 (52%), Gaps = 26/285 (9%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPN 429
++LG G FG V K + VAVK+LK+EA++ L+ + EA ++ + D+P
Sbjct: 17 KELGSGNFGTV---KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 73
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+++G+C M L+ E G LN +L+ N ++ +
Sbjct: 74 IVRMIGICEAESWM-LVMEMAELGPLNKYLQ---QNRHVKDK-----------------N 112
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGDE 548
+I + Q++ GM YL + FVHRDLA RN L+ Q KI+DFGLS+ + ++YYK
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 172
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+ PV+W E I Y K++ +SDVW+FGV +WE FS+ +PY G+ EV +++G
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 232
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
+ P P +YDLM LCW NRP F + L N D+ N
Sbjct: 233 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 277
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 145/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQ 65
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 66 VMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK-GEMGKYL------------ 111
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 112 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 165
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW P RP+F
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 16 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 68
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 69 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLIMQLMPFGCLLDYVREHKDN--IGSQY--- 122
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFG +
Sbjct: 123 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 168
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 169 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 228
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 229 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 283
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 145/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQ 54
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 55 VMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK-GEMGKYL------------ 100
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 101 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 154
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 155 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 214
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW P RP+F
Sbjct: 215 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 251
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 149/284 (52%), Gaps = 27/284 (9%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTL---VAVKMLKDEASEYLQTDFEREACLLAEFD 426
V+ LG GAFG V++ G+ E T+ VA+K+L + +F EA ++A D
Sbjct: 20 VKVLGSGAFGTVYK----GIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
HP++V+LLGVC + + L+ + M G L +++ N +
Sbjct: 76 HPHLVRLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHKDN-------------------IG 115
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ L+ +QIA GM+YL +R+ VHRDLA RN L+ VKI DFGL+R + +
Sbjct: 116 SQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 175
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
+ +P++WM LE I Y K+T +SDVW++GV +WE+ +F +PY G+ E+ +++G
Sbjct: 176 ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG 235
Query: 607 NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
L P +Y +M CW + +RP F+ + + RD
Sbjct: 236 ERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 279
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 153/286 (53%), Gaps = 36/286 (12%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
++ ++ +G+G FG V G VAVK +K++A+ F EA ++ +
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDAT---AQAFLAEASVMTQ 70
Query: 425 FDHPNIVKLLGVCAVGKP-MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
H N+V+LLGV K + ++ EYM +G L D+LR S R
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----------------SRGRSV 113
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY-LQD 542
C L+ +L + M YL FVHRDLA RN L+++ V K++DFGL+++ QD
Sbjct: 114 LGGDC-LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 172
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K +PV+W E++ K++ +SDVW+FG+ LWEI+SF PY + ++VV
Sbjct: 173 TGK------LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 226
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
+++G + APD P A+Y++MK CW++ RPSF + + L +IK
Sbjct: 227 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 151/287 (52%), Gaps = 28/287 (9%)
Query: 362 FPRNDIIYVRD--LGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDFERE 418
F + D + + D LG G FG V Q G+ + + + VA+K+LK + + RE
Sbjct: 5 FLKRDNLLIADIELGCGNFGSVRQ----GVYRMRKKQIDVAIKVLKQGTEKADTEEMMRE 60
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
A ++ + D+P IV+L+GVC + + L+ E G G L+ FL
Sbjct: 61 AQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFL------------------- 100
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
+ + ++ ++ + Q++ GM YL ++ FVHRDLA RN L+ ++ KI+DFGLS+ +
Sbjct: 101 VGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
Query: 539 YLQD-YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
D YY P++W E I + K++ SDVW++GV +WE S+ +PY +
Sbjct: 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP 220
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
EV+ +I++G ++ P P LY LM CW K +RP F T+ Q +
Sbjct: 221 EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 267
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 145/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQ 56
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 57 VMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK-GEMGKYL------------ 102
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 103 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 156
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 157 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 216
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW P RP+F
Sbjct: 217 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 253
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 145/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQ 65
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 66 VMKKIRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK-GEMGKYL------------ 111
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 112 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 165
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW P RP+F
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 153/286 (53%), Gaps = 36/286 (12%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
++ ++ +G+G FG V G VAVK +K++A+ F EA ++ +
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDAT---AQAFLAEASVMTQ 55
Query: 425 FDHPNIVKLLGVCAVGKP-MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
H N+V+LLGV K + ++ EYM +G L D+LR S R
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----------------SRGRSV 98
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY-LQD 542
C L+ +L + M YL FVHRDLA RN L+++ V K++DFGL+++ QD
Sbjct: 99 LGGDC-LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 157
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K +PV+W E++ K++ +SDVW+FG+ LWEI+SF PY + ++VV
Sbjct: 158 TGK------LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 211
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
+++G + APD P A+Y++MK CW++ RPSF + + L +IK
Sbjct: 212 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 19 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 71
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 72 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 125
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFG +
Sbjct: 126 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 171
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 172 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 232 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 286
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 145/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQ 65
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 66 VMKKLRHEKLVQLYAVVS-EEPIYIVCEYMSKGSLLDFLK-GEMGKYL------------ 111
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 112 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 165
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW P RP+F
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ LG GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 12 LKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 65 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 118
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFG +
Sbjct: 119 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRA 164
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ L GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 19 LKETEFKK-----IKVLSSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 71
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 72 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 125
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 126 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 172 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 231
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 232 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 286
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 28/311 (9%)
Query: 341 PCNASYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VA 399
P S + L L++ EF + ++ LG GAFG V+ K + + E+ + VA
Sbjct: 30 PLTPSGEAPNQALLRILKETEFKK-----IKVLGSGAFGTVY--KGLWIPEGEKVKIPVA 82
Query: 400 VKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFL 459
+ L++ S + EA ++A D+P++ +LLG+C + L+ + M G L D++
Sbjct: 83 IMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV 141
Query: 460 RICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519
R N I Y L+ +QIA GM YL DR+ VHRDLA RN
Sbjct: 142 REHKDN--IGSQY-----------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNV 182
Query: 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVC 579
L+ VKI DFGL++ + ++ E +P++WM LESIL+ YT +SDVW++GV
Sbjct: 183 LVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVT 242
Query: 580 LWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRT 639
+WE+ +F +PY G+ E+ +++G L P +Y +M CW + +RP FR
Sbjct: 243 VWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRE 302
Query: 640 IYQTLWNIKRD 650
+ + RD
Sbjct: 303 LIIEFSKMARD 313
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 155/295 (52%), Gaps = 28/295 (9%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDF 415
L++ EF + ++ L GAFG V+ K + + E+ + VA+K L++ S +
Sbjct: 12 LKETEFKK-----IKVLSSGAFGTVY--KGLWIPEGEKVKIPVAIKELREATSPKANKEI 64
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
EA ++A D+P++ +LLG+C + + L+ + M G L D++R N I Y
Sbjct: 65 LDEAYVMASVDNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDN--IGSQY--- 118
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ +QIA GM YL DR+ VHRDLA RN L+ VKI DFGL+
Sbjct: 119 --------------LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
+ + ++ E +P++WM LESIL+ YT +SDVW++GV +WE+ +F +PY G+
Sbjct: 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E+ +++G L P +Y +M CW + +RP FR + + RD
Sbjct: 225 ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 145/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLK--PGTMSPEAFLQEAQ 55
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 56 VMKKLRHEKLVQLYAVVS-EEPIXIVTEYMSKGSLLDFLK-GETGKYL------------ 101
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 102 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 155
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 156 DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 215
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW +P RP+F
Sbjct: 216 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 252
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 145/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQ 65
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 66 VMKKLRHEKLVQLYAVVS-EEPIYIVMEYMSKGCLLDFLK-GEMGKYL------------ 111
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 112 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 165
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW P RP+F
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 146/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLK--PGTMSPEAFLQEAQ 62
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 63 VMKKLRHEKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLK-GETGKYL------------ 108
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + ++ QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 109 RLPQL-----VDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 162
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ + + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 163 DNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 222
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW +P RP+F
Sbjct: 223 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 259
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 145/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMS--PEAFLQEAQ 65
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 66 VMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGCLLDFLK-GEMGKYL------------ 111
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 112 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 165
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ Y + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 166 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW P RP+F
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 144/277 (51%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + LGQG FG V+ G T VA+K LK F +EA
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGT------TRVAIKTLK--PGTMSPEAFLQEAQ 65
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ Y+
Sbjct: 66 VMKKLRHEKLVQLYAVVS-EEPIYIVIEYMSKGSLLDFLK-GEMGKYL------------ 111
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
R+PQL + +A QIASGM Y+ +VHRDL N L+ + +V K+ADFGL+R +
Sbjct: 112 RLPQL-----VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIE 165
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 166 DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 225
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
++ G + P P++L+DLM CW P RP+F
Sbjct: 226 DQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF 262
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 150/285 (52%), Gaps = 26/285 (9%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPN 429
++LG G FG V K + VAVK+LK+EA++ L+ + EA ++ + D+P
Sbjct: 17 KELGSGNFGTV---KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 73
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+++G+C M L+ E G LN +L+ N ++ +
Sbjct: 74 IVRMIGICEAESWM-LVMEMAELGPLNKYLQ---QNRHVKDK-----------------N 112
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGDE 548
+I + Q++ GM YL + FVHRDLA RN L+ Q KI+DFGLS+ + ++ YK
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT 172
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+ PV+W E I Y K++ +SDVW+FGV +WE FS+ +PY G+ EV +++G
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 232
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
+ P P +YDLM LCW NRP F + L N D+ N
Sbjct: 233 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 277
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 152/286 (53%), Gaps = 36/286 (12%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
++ ++ +G+G FG V G VAVK +K++A+ F EA ++ +
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYRG-------NKVAVKCIKNDAT---AQAFLAEASVMTQ 61
Query: 425 FDHPNIVKLLGVCAVGKP-MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
H N+V+LLGV K + ++ EYM +G L D+LR S R
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-----------------SRGRSV 104
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY-LQD 542
C L+ +L + M YL FVHRDLA RN L+++ V K++DFGL+++ QD
Sbjct: 105 LGGDC-LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 163
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K +PV+W E++ ++ +SDVW+FG+ LWEI+SF PY + ++VV
Sbjct: 164 TGK------LPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 217
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
+++G + APD P A+Y++MK CW++ RPSF + + L +IK
Sbjct: 218 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 145/277 (52%), Gaps = 28/277 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
E PR + ++ LG G FG V+ G K VA+K LK F EA
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTK------VAIKTLK--PGTMSPESFLEEAQ 56
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
++ + H +V+L V + +P+ ++ EYM +G L DFL+ E
Sbjct: 57 IMKKLKHDKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLK-------------DGEGRAL 102
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
++P +L+ +A Q+A+GM Y+ ++HRDL + N L+ + ++ KIADFGL+R +
Sbjct: 103 KLP-----NLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLAR-LIE 156
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600
+ + P++W E+ LY ++T++SDVW+FG+ L E+ + PY G+ + EV+
Sbjct: 157 DNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL 216
Query: 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ ++ G + P + P +L++LM CW P RP+F
Sbjct: 217 EQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTF 253
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 144/282 (51%), Gaps = 23/282 (8%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
V+ LG GAFG V+ K + E + VA+K+L++ S + EA ++A P
Sbjct: 22 VKVLGSGAFGTVY--KGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSP 79
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
+ +LLG+C + + L+ + M G L D +R +L +
Sbjct: 80 YVSRLLGIC-LTSTVQLVTQLMPYGCLLDHVR-------------------ENRGRLGSQ 119
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
DL+ +QIA GM YL D + VHRDLA RN L+ VKI DFGL+R + + + +
Sbjct: 120 DLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD 179
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+P++WM LESIL ++T +SDVW++GV +WE+ +F +PY G+ E+ +++G
Sbjct: 180 GGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGER 239
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
L P +Y +M CW + RP FR + + RD
Sbjct: 240 LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARD 281
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 144/279 (51%), Gaps = 30/279 (10%)
Query: 365 NDIIYVRDLGQGAFGRVFQAK--APGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREAC 420
D+ + LG G+FG V + + AP + VAVK LK + + DF RE
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPS----GKTVSVAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+ DH N+++L GV + PM ++ E G L D LR +++ GT S
Sbjct: 68 AMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSR------ 119
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM-Y 539
A+Q+A GM YL ++F+HRDLA RN L+ + +VKI DFGL R +
Sbjct: 120 ------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 167
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
D+Y E+ +P W ES+ ++ SD W FGV LWE+F++ +P+ GL ++
Sbjct: 168 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 227
Query: 600 VKYI-KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ I KEG L P++ P +Y++M CW KP +RP+F
Sbjct: 228 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 144/279 (51%), Gaps = 30/279 (10%)
Query: 365 NDIIYVRDLGQGAFGRVFQAK--APGLLKHEEFTLVAVKMLKDEASEYLQT--DFEREAC 420
D+ + LG G+FG V + + AP + VAVK LK + + DF RE
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPS----GKTVSVAVKCLKPDVLSQPEAMDDFIREVN 67
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+ DH N+++L GV + PM ++ E G L D LR +++ GT S
Sbjct: 68 AMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLR-KHQGHFLLGTLSR------ 119
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM-Y 539
A+Q+A GM YL ++F+HRDLA RN L+ + +VKI DFGL R +
Sbjct: 120 ------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 167
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
D+Y E+ +P W ES+ ++ SD W FGV LWE+F++ +P+ GL ++
Sbjct: 168 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 227
Query: 600 VKYI-KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ I KEG L P++ P +Y++M CW KP +RP+F
Sbjct: 228 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 144/279 (51%), Gaps = 30/279 (10%)
Query: 365 NDIIYVRDLGQGAFGRVFQAK--APGLLKHEEFTLVAVKMLKDEASEYLQT--DFEREAC 420
D+ + LG G+FG V + + AP + VAVK LK + + DF RE
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPS----GKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+ DH N+++L GV + PM ++ E G L D LR +++ GT S
Sbjct: 74 AMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSR------ 125
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM-Y 539
A+Q+A GM YL ++F+HRDLA RN L+ + +VKI DFGL R +
Sbjct: 126 ------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
D+Y E+ +P W ES+ ++ SD W FGV LWE+F++ +P+ GL ++
Sbjct: 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 233
Query: 600 VKYI-KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ I KEG L P++ P +Y++M CW KP +RP+F
Sbjct: 234 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 272
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 144/279 (51%), Gaps = 30/279 (10%)
Query: 365 NDIIYVRDLGQGAFGRVFQAK--APGLLKHEEFTLVAVKMLKDEASEYLQT--DFEREAC 420
D+ + LG G+FG V + + AP + VAVK LK + + DF RE
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPS----GKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+ DH N+++L GV + PM ++ E G L D LR +++ GT S
Sbjct: 64 AMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSR------ 115
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM-Y 539
A+Q+A GM YL ++F+HRDLA RN L+ + +VKI DFGL R +
Sbjct: 116 ------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
D+Y E+ +P W ES+ ++ SD W FGV LWE+F++ +P+ GL ++
Sbjct: 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223
Query: 600 VKYI-KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ I KEG L P++ P +Y++M CW KP +RP+F
Sbjct: 224 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 144/279 (51%), Gaps = 30/279 (10%)
Query: 365 NDIIYVRDLGQGAFGRVFQAK--APGLLKHEEFTLVAVKMLKDEASEYLQT--DFEREAC 420
D+ + LG G+FG V + + AP + VAVK LK + + DF RE
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPS----GKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+ DH N+++L GV + PM ++ E G L D LR +++ GT S
Sbjct: 64 AMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLR-KHQGHFLLGTLSR------ 115
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM-Y 539
A+Q+A GM YL ++F+HRDLA RN L+ + +VKI DFGL R +
Sbjct: 116 ------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
D+Y E+ +P W ES+ ++ SD W FGV LWE+F++ +P+ GL ++
Sbjct: 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223
Query: 600 VKYI-KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ I KEG L P++ P +Y++M CW KP +RP+F
Sbjct: 224 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 64
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 106
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HR+LATRN L+ ++ VKI DFGL++ +
Sbjct: 107 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVL 165
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++YYK E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 166 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 225
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 226 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 283
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 149/298 (50%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 63
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 105
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 106 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++++K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 224
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 225 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 143/279 (51%), Gaps = 30/279 (10%)
Query: 365 NDIIYVRDLGQGAFGRVFQAK--APGLLKHEEFTLVAVKMLKDEASEYLQT--DFEREAC 420
D+ + LG G+FG V + + AP + VAVK LK + + DF RE
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPS----GKTVSVAVKCLKPDVLSQPEAMDDFIREVN 73
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+ DH N+++L GV + PM ++ E G L D LR +++ GT S
Sbjct: 74 AMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSR------ 125
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM-Y 539
A+Q+A GM YL ++F+HRDLA RN L+ + +VKI DFGL R +
Sbjct: 126 ------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
D+ E+ +P W ES+ ++ SD W FGV LWE+F++ +P+ GL ++
Sbjct: 174 NDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 233
Query: 600 VKYI-KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ I KEG L P++ P +Y++M CW KP +RP+F
Sbjct: 234 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 272
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 143/279 (51%), Gaps = 30/279 (10%)
Query: 365 NDIIYVRDLGQGAFGRVFQAK--APGLLKHEEFTLVAVKMLKDEASEYLQT--DFEREAC 420
D+ + LG G+FG V + + AP + VAVK LK + + DF RE
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPS----GKTVSVAVKCLKPDVLSQPEAMDDFIREVN 63
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+ DH N+++L GV + PM ++ E G L D LR +++ GT S
Sbjct: 64 AMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSR------ 115
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM-Y 539
A+Q+A GM YL ++F+HRDLA RN L+ + +VKI DFGL R +
Sbjct: 116 ------------YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
D+ E+ +P W ES+ ++ SD W FGV LWE+F++ +P+ GL ++
Sbjct: 164 NDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 223
Query: 600 VKYI-KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ I KEG L P++ P +Y++M CW KP +RP+F
Sbjct: 224 LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 153/301 (50%), Gaps = 43/301 (14%)
Query: 362 FPRNDIIYVRDLGQGAFGRVFQAK--APGLLKHEEFTLVAVKMLKDEASEYLQTDFEREA 419
F + + +RDLG+G FG+V + G E+ VAVK LK E+ D ++E
Sbjct: 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQ---VAVKSLKPESGGNHIADLKKEI 74
Query: 420 CLLAEFDHPNIVKLLGVCAV--GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
+L H NIVK G+C G + L+ E++ G L ++L P N ++
Sbjct: 75 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL----PKN---------KN 121
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
I+ QL A+QI GM YL R++VHRDLA RN L+ + VKI DFGL++
Sbjct: 122 KINLKQQLK------YAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175
Query: 538 MYL--QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF--------- 586
+ + D+ D+ PV W E ++ +K+ + SDVW+FGV L E+ ++
Sbjct: 176 IETDKEXXTVKDDRDS-PVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA 234
Query: 587 ----ALQPYYG-LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIY 641
+ P +G +T +V +KEG L P N PD +Y LM+ CW +P NR SF+ +
Sbjct: 235 LFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
Query: 642 Q 642
+
Sbjct: 295 E 295
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 153/301 (50%), Gaps = 43/301 (14%)
Query: 362 FPRNDIIYVRDLGQGAFGRVFQAK--APGLLKHEEFTLVAVKMLKDEASEYLQTDFEREA 419
F + + +RDLG+G FG+V + G E+ VAVK LK E+ D ++E
Sbjct: 6 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQ---VAVKSLKPESGGNHIADLKKEI 62
Query: 420 CLLAEFDHPNIVKLLGVCAV--GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
+L H NIVK G+C G + L+ E++ G L ++L P N ++
Sbjct: 63 EILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL----PKN---------KN 109
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
I+ QL A+QI GM YL R++VHRDLA RN L+ + VKI DFGL++
Sbjct: 110 KINLKQQLK------YAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 163
Query: 538 MYL--QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF--------- 586
+ + D+ D+ PV W E ++ +K+ + SDVW+FGV L E+ ++
Sbjct: 164 IETDKEXXTVKDDRDS-PVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA 222
Query: 587 ----ALQPYYG-LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIY 641
+ P +G +T +V +KEG L P N PD +Y LM+ CW +P NR SF+ +
Sbjct: 223 LFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
Query: 642 Q 642
+
Sbjct: 283 E 283
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 66
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L ++
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----------------QAH 110
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
R+ + L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 111 AERIDHIK---LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 168 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 227
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 228 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 63
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 105
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 106 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 165 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 224
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 225 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 66
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 108
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 109 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 168 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 227
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 228 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 81
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 123
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 124 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 183 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 242
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 243 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 70
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 112
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 113 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 171
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 172 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 231
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 232 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 289
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 94
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 136
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 137 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 196 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 255
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 256 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 62
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 104
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 105 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 163
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 164 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 223
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 224 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 281
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 81
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 123
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 124 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 183 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 242
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 243 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 68
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 110
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 111 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 169
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 170 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 229
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 230 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 287
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 61
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 103
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 104 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 162
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 163 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 222
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 223 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 280
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 63
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 105
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 106 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 165 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 224
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 225 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 12 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 69
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 111
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 112 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 170
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 171 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 230
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 231 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 288
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 39/298 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + +++ LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 67
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ EY+ G L D+L+
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------------------ 109
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL++ +
Sbjct: 110 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 168
Query: 539 -YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------AL 588
++ K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 169 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF 228
Query: 589 QPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 229 MRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 286
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 147/299 (49%), Gaps = 41/299 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREAC 420
+F + ++R LG+G FG V + L + +VAVK L+ E+L+ DFERE
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPL-QDNTGEVVAVKKLQHSTEEHLR-DFEREIE 66
Query: 421 LLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L H NIVK GVC A + + L+ E++ G L ++L+
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQ------------------ 108
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
++ L+ QI GM YL ++++HRDLATRN L+ ++ VKI DFGL+ K+
Sbjct: 109 -KHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-KV 166
Query: 539 YLQD--YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF---------A 587
QD K E P+ W ES+ +K++V SDVW+FGV L+E+F++
Sbjct: 167 LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE 226
Query: 588 LQPYYGLTHE------EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G + +++ +K L PD PD +Y +M CWN RPSFR +
Sbjct: 227 FMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 143/293 (48%), Gaps = 29/293 (9%)
Query: 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDFEREAC 420
F ++ ++ LG G FG V K + + E + V +K+++D++
Sbjct: 28 FKETELRKLKVLGSGVFGTVH--KGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML 85
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+ DH +IV+LLG+C G + L+ +Y+ G L D +R H
Sbjct: 86 AIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQ------------------H 126
Query: 481 RV---PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
R PQL L+ +QIA GM YL + VHR+LA RN L+ V++ADFG++
Sbjct: 127 RGALGPQL----LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADL 182
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+ D P++WM LESI + KYT +SDVW++GV +WE+ +F +PY GL
Sbjct: 183 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 242
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV +++G L P +Y +M CW + RP+F+ + + RD
Sbjct: 243 EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 295
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 143/293 (48%), Gaps = 29/293 (9%)
Query: 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEASEYLQTDFEREAC 420
F ++ ++ LG G FG V K + + E + V +K+++D++
Sbjct: 10 FKETELRKLKVLGSGVFGTVH--KGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML 67
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+ DH +IV+LLG+C G + L+ +Y+ G L D +R H
Sbjct: 68 AIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQ------------------H 108
Query: 481 RV---PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
R PQL L+ +QIA GM YL + VHR+LA RN L+ V++ADFG++
Sbjct: 109 RGALGPQL----LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADL 164
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+ D P++WM LESI + KYT +SDVW++GV +WE+ +F +PY GL
Sbjct: 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA 224
Query: 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
EV +++G L P +Y +M CW + RP+F+ + + RD
Sbjct: 225 EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 149/312 (47%), Gaps = 41/312 (13%)
Query: 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL 421
F + Y+ LG+G FG V + L + LVAVK L+ + Q DF+RE +
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQHSGPDQ-QRDFQREIQI 64
Query: 422 LAEFDHPNIVKLLGVC-AVGK-PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
L IVK GV G+ + L+ EY+ G L DFL+
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR------------------ 106
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
HR +L L+ + QI GM YL R+ VHRDLA RN L+ + VKIADFGL++ +
Sbjct: 107 HRA-RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 165
Query: 540 L-QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF-------ALQPY 591
L +DYY E P+ W ES+ N ++ +SDVW+FGV L+E+F++ + +
Sbjct: 166 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL 225
Query: 592 YGLTHEEVVKYIKE-------GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI---Y 641
+ E V + G L AP P +++LMKLCW P +RPSF +
Sbjct: 226 RMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 285
Query: 642 QTLWNIKRDLEN 653
LW+ R E
Sbjct: 286 DMLWSGSRGCET 297
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 149/312 (47%), Gaps = 41/312 (13%)
Query: 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL 421
F + Y+ LG+G FG V + L + LVAVK L+ + Q DF+RE +
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQHSGPDQ-QRDFQREIQI 77
Query: 422 LAEFDHPNIVKLLGVC-AVGK-PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
L IVK GV G+ + L+ EY+ G L DFL+
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR------------------ 119
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
HR +L L+ + QI GM YL R+ VHRDLA RN L+ + VKIADFGL++ +
Sbjct: 120 HRA-RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178
Query: 540 L-QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF-------ALQPY 591
L +DYY E P+ W ES+ N ++ +SDVW+FGV L+E+F++ + +
Sbjct: 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL 238
Query: 592 YGLTHEEVVKYIKE-------GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI---Y 641
+ E V + G L AP P +++LMKLCW P +RPSF +
Sbjct: 239 RMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 298
Query: 642 QTLWNIKRDLEN 653
LW+ R E
Sbjct: 299 DMLWSGSRGCET 310
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 150/312 (48%), Gaps = 41/312 (13%)
Query: 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL 421
F + Y+ LG+G FG V + L LVAVK L+ + Q DF+RE +
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRY-DPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQI 65
Query: 422 LAEFDHPNIVKLLGVC-AVGK-PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
L IVK GV G+ + L+ EY+ G L DFL+
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR------------------ 107
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
HR +L L+ + QI GM YL R+ VHRDLA RN L+ + VKIADFGL++ +
Sbjct: 108 HRA-RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 166
Query: 540 L-QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF-------ALQPY 591
L +DYY E P+ W ES+ N ++ +SDVW+FGV L+E+F++ + +
Sbjct: 167 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL 226
Query: 592 YGLTHEEVVKYI-------KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI---Y 641
+ E V + +EG L AP P +++LMKLCW P +RPSF +
Sbjct: 227 RMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 286
Query: 642 QTLWNIKRDLEN 653
LW+ R E
Sbjct: 287 DMLWSGSRGCET 298
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 148/308 (48%), Gaps = 41/308 (13%)
Query: 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL 421
F + Y+ LG+G FG V + L LVAVK L+ + Q DF+RE +
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRY-DPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQI 61
Query: 422 LAEFDHPNIVKLLGVC-AVGKP-MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
L IVK GV G+P + L+ EY+ G L DFL+
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR------------------ 103
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
HR +L L+ + QI GM YL R+ VHRDLA RN L+ + VKIADFGL++ +
Sbjct: 104 HRA-RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 162
Query: 540 L-QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF-------ALQPY 591
L +D E P+ W ES+ N ++ +SDVW+FGV L+E+F++ + +
Sbjct: 163 LDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL 222
Query: 592 YGLTHEEVVKYI-------KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI---Y 641
+ E V + +EG L AP P +++LMKLCW P +RPSF +
Sbjct: 223 RMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 282
Query: 642 QTLWNIKR 649
LW+ R
Sbjct: 283 DMLWSGSR 290
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 144/301 (47%), Gaps = 49/301 (16%)
Query: 362 FPRNDIIYVRDLGQGAFGRV----FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
F + + +RDLG+G FG+V + G + +VAVK LK+ L++ ++R
Sbjct: 6 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE-----MVAVKALKEGCGPQLRSGWQR 60
Query: 418 EACLLAEFDHPNIVKLLGVCA--VGKPMCLLFEYMGRGDLNDFL-RICSPNNYINGTYSS 474
E +L H +IVK G C K + L+ EY+ G L D+L R C
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC------------ 108
Query: 475 MESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+ L+ A QI GM YL + ++HR LA RN L+++ +VKI DFGL
Sbjct: 109 ----------VGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGL 158
Query: 535 SRKM-YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA---LQP 590
++ + +YY+ E+ PV W E + K+ SDVW+FGV L+E+ ++ P
Sbjct: 159 AKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP 218
Query: 591 YYGLT----HEE-------VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRT 639
+ T H + + + ++ G L PD P +Y LMK CW + RP+F+
Sbjct: 219 HTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQN 278
Query: 640 I 640
+
Sbjct: 279 L 279
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 144/301 (47%), Gaps = 49/301 (16%)
Query: 362 FPRNDIIYVRDLGQGAFGRV----FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
F + + +RDLG+G FG+V + G + +VAVK LK+ L++ ++R
Sbjct: 5 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE-----MVAVKALKEGCGPQLRSGWQR 59
Query: 418 EACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFL-RICSPNNYINGTYSS 474
E +L H +IVK G C K + L+ EY+ G L D+L R C
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC------------ 107
Query: 475 MESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+ L+ A QI GM YL + ++HR LA RN L+++ +VKI DFGL
Sbjct: 108 ----------VGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGL 157
Query: 535 SRKM-YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA---LQP 590
++ + +YY+ E+ PV W E + K+ SDVW+FGV L+E+ ++ P
Sbjct: 158 AKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP 217
Query: 591 YYGLT----HEE-------VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRT 639
+ T H + + + ++ G L PD P +Y LMK CW + RP+F+
Sbjct: 218 HTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQN 277
Query: 640 I 640
+
Sbjct: 278 L 278
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 142/307 (46%), Gaps = 47/307 (15%)
Query: 362 FPRNDIIYVRDLGQGAFGRV----FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER 417
F + + +RDLG+G FG+V + G + +VAVK LK +A ++ +++
Sbjct: 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE-----MVAVKALKADAGPQHRSGWKQ 82
Query: 418 EACLLAEFDHPNIVKLLGVC--AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
E +L H +I+K G C A + L+ EY+ G L D+L P + I
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIG------ 132
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
L+ A QI GM YL + ++HRDLA RN L+++ +VKI DFGL+
Sbjct: 133 -----------LAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
Query: 536 RKM-YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF-------- 586
+ + + Y+ E+ PV W E + K+ SDVW+FGV L+E+ +
Sbjct: 182 KAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPP 241
Query: 587 -ALQPYYGLTHEE-----VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
G+ + + + ++ G L PD P +Y LMK CW + RP+F +
Sbjct: 242 TKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENL 301
Query: 641 YQTLWNI 647
L +
Sbjct: 302 IPILKTV 308
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 145/315 (46%), Gaps = 47/315 (14%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRV----FQAKAPGLLKHEEFTLVAVKMLKDEASE 409
+P + F + + +RDLG+G FG+V + G + +VAVK LK +
Sbjct: 3 SPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE-----MVAVKALKADCGP 57
Query: 410 YLQTDFEREACLLAEFDHPNIVKLLGVCA--VGKPMCLLFEYMGRGDLNDFLRICSPNNY 467
++ +++E +L H +I+K G C K + L+ EY+ G L D+L P +
Sbjct: 58 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHS 113
Query: 468 INGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
I L+ A QI GM YL + ++HR+LA RN L+++ +V
Sbjct: 114 IG-----------------LAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLV 156
Query: 528 KIADFGLSRKM-YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF 586
KI DFGL++ + +YY+ E+ PV W E + K+ SDVW+FGV L+E+ +
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 216
Query: 587 ---------ALQPYYGLTHEE-----VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPM 632
G+ + + + ++ G L PD P +Y LMK CW +
Sbjct: 217 CDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEAS 276
Query: 633 NRPSFRTIYQTLWNI 647
RP+F + L +
Sbjct: 277 FRPTFENLIPILKTV 291
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 145/315 (46%), Gaps = 47/315 (14%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRV----FQAKAPGLLKHEEFTLVAVKMLKDEASE 409
+P + F + + +RDLG+G FG+V + G + +VAVK LK +
Sbjct: 3 SPASDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGE-----MVAVKALKADCGP 57
Query: 410 YLQTDFEREACLLAEFDHPNIVKLLGVCA--VGKPMCLLFEYMGRGDLNDFLRICSPNNY 467
++ +++E +L H +I+K G C K + L+ EY+ G L D+L P +
Sbjct: 58 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHS 113
Query: 468 INGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
I L+ A QI GM YL + ++HR+LA RN L+++ +V
Sbjct: 114 IG-----------------LAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLV 156
Query: 528 KIADFGLSRKM-YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF 586
KI DFGL++ + +YY+ E+ PV W E + K+ SDVW+FGV L+E+ +
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 216
Query: 587 ---------ALQPYYGLTHEE-----VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPM 632
G+ + + + ++ G L PD P +Y LMK CW +
Sbjct: 217 CDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEAS 276
Query: 633 NRPSFRTIYQTLWNI 647
RP+F + L +
Sbjct: 277 FRPTFENLIPILKTV 291
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 130/287 (45%), Gaps = 42/287 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+G G FG+V++A G +E + A + DE + +EA L A HPNI+
Sbjct: 15 IGIGGFGKVYRAFWIG----DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLIT 492
L GVC +CL+ E+ G LN L S R+P L+
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVL------------------SGKRIP---PDILVN 109
Query: 493 IALQIASGMVYLSDRKFV---HRDLATRNCLINDQM--------VVKIADFGLSRKMYLQ 541
A+QIA GM YL D V HRDL + N LI ++ ++KI DFGL+R+ +
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601
A WM E I + ++ SDVW++GV LWE+ + + P+ G+ V
Sbjct: 170 TKMSA----AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV-PFRGIDGLAVAY 224
Query: 602 YIKEGNI-LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ + L P P+ LM+ CWN P +RPSF I L I
Sbjct: 225 GVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 33/292 (11%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML--KDEASEYLQTDF 415
+ ++ P D+ +G G+FG V +A+ G + VAVK+L +D +E + +F
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHG-------SDVAVKILMEQDFHAERV-NEF 81
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
RE ++ HPNIV +G + ++ EY+ RG L Y +
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL----------------YRLL 125
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRK--FVHRDLATRNCLINDQMVVKIADFG 533
S R QL +++A +A GM YL +R VHRDL + N L++ + VK+ DFG
Sbjct: 126 HKSGAR-EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFG 184
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR + + P WM E + +SDV++FGV LWE+ + QP+
Sbjct: 185 LSR-LKASXFLXSKXAAGTP-EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ-QPWGN 241
Query: 594 LTHEEVVKYIK-EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
L +VV + + L+ P N + +++ CW +P RPSF TI L
Sbjct: 242 LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 138/292 (47%), Gaps = 33/292 (11%)
Query: 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML--KDEASEYLQTDF 415
+ ++ P D+ +G G+FG V +A+ G + VAVK+L +D +E + +F
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHG-------SDVAVKILMEQDFHAERV-NEF 81
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
RE ++ HPNIV +G + ++ EY+ RG L Y +
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL----------------YRLL 125
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRK--FVHRDLATRNCLINDQMVVKIADFG 533
S R QL +++A +A GM YL +R VHR+L + N L++ + VK+ DFG
Sbjct: 126 HKSGAR-EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFG 184
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593
LSR + + P WM E + +SDV++FGV LWE+ + QP+
Sbjct: 185 LSR-LKASTFLSSKSAAGTP-EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ-QPWGN 241
Query: 594 LTHEEVVKYIK-EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
L +VV + + L+ P N + +++ CW +P RPSF TI L
Sbjct: 242 LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 137/303 (45%), Gaps = 44/303 (14%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFERE 418
E P I + +G G+FG V++ K G VAVKML A + LQ F+ E
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQA-FKNE 70
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L + H NI+ +G KP + G S ++++ + + E
Sbjct: 71 VGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEG--------SSLYHHLHASETKFEMK 120
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
LI IA Q A GM YL + +HRDL + N +++ VKI DFGL+ +
Sbjct: 121 ----------KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170
Query: 539 YLQDYYKGDENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY +
Sbjct: 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL-PYSNIN 229
Query: 596 H-EEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
+ +++++ + G++ +PD N P + LM C K RPSF I + +
Sbjct: 230 NRDQIIEMVGRGSL--SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
Query: 649 RDL 651
R+L
Sbjct: 288 REL 290
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 131/302 (43%), Gaps = 42/302 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FEREA 419
E P I + +G G+FG V++ K G VAVKML A Q F+ E
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQAFKNEV 55
Query: 420 CLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+L + H NI+ +G KP + G SS+ +
Sbjct: 56 GVLRKTRHVNILLFMGYST--KPQLAIVTQWCEG-------------------SSLYHHL 94
Query: 480 HRV-PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
H + + LI IA Q A GM YL + +HRDL + N +++ + VKI DFGL+ +
Sbjct: 95 HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK 154
Query: 539 YLQDYYKGDENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY +
Sbjct: 155 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL-PYSNIN 213
Query: 596 HEEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
+ + + ++ G +PD N P A+ LM C K RP F I ++ + R
Sbjct: 214 NRDQIIFM-VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 272
Query: 650 DL 651
L
Sbjct: 273 SL 274
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 140/306 (45%), Gaps = 50/306 (16%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFERE 418
E P I + +G G+FG V++ K G VAVKML A + LQ F+ E
Sbjct: 8 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQA-FKNE 58
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L + H NI+ +G KP + G S ++++ + + E
Sbjct: 59 VGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEG--------SSLYHHLHASETKFEMK 108
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
LI IA Q A GM YL + +HRDL + N +++ VKI DFGL+
Sbjct: 109 ----------KLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA--- 155
Query: 539 YLQDYYKGD---ENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYY 592
++ + G E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY
Sbjct: 156 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL-PYS 214
Query: 593 GLTH-EEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+ + +++++ + G++ +PD N P + LM C K RPSF I +
Sbjct: 215 NINNRDQIIEMVGRGSL--SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
Query: 646 NIKRDL 651
+ R+L
Sbjct: 273 ELAREL 278
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 133/303 (43%), Gaps = 44/303 (14%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFERE 418
E P I + +G G+FG V++ K G VAVKML A + LQ F+ E
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQA-FKNE 82
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L + H NI+ +G KP + G SS+
Sbjct: 83 VGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEG-------------------SSLYHH 121
Query: 479 IHRV-PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+H + + LI IA Q A GM YL + +HRDL + N +++ + VKI DFGL+ +
Sbjct: 122 LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATE 181
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYYGL 594
E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY +
Sbjct: 182 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL-PYSNI 240
Query: 595 THEEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
+ + + ++ G +PD N P A+ LM C K RP F I ++ +
Sbjct: 241 NNRDQIIFM-VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLA 299
Query: 649 RDL 651
R L
Sbjct: 300 RSL 302
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 131/302 (43%), Gaps = 42/302 (13%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FEREA 419
E P I + +G G+FG V++ K G VAVKML A Q F+ E
Sbjct: 24 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQAFKNEV 75
Query: 420 CLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+L + H NI+ +G KP + G SS+ +
Sbjct: 76 GVLRKTRHVNILLFMGYST--KPQLAIVTQWCEG-------------------SSLYHHL 114
Query: 480 HRV-PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
H + + LI IA Q A GM YL + +HRDL + N +++ + VKI DFGL+ +
Sbjct: 115 HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEK 174
Query: 539 YLQDYYKGDENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY +
Sbjct: 175 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL-PYSNIN 233
Query: 596 HEEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
+ + + ++ G +PD N P A+ LM C K RP F I ++ + R
Sbjct: 234 NRDQIIFM-VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR 292
Query: 650 DL 651
L
Sbjct: 293 SL 294
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 126/303 (41%), Gaps = 38/303 (12%)
Query: 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL 421
F +D+I+ LG+G FG+ + + H E V V E Q F +E +
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIK------VTHRETGEVMVMKELIRFDEETQRTFLKEVKV 60
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
+ +HPN++K +GV K + + EY+ G L G SM+S
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR-------------GIIKSMDS---- 103
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY-- 539
Q ++ A IASGM YL +HRDL + NCL+ + V +ADFGL+R M
Sbjct: 104 --QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161
Query: 540 ------LQDYYKGDENDAIPV----RWMPLESILYNKYTVESDVWAFGVCLWEIFS-FAL 588
L+ K D V WM E I Y + DV++FG+ L EI
Sbjct: 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA 221
Query: 589 QPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
P Y + ++ P N P + + + C ++ P RPSF + L ++
Sbjct: 222 DPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281
Query: 649 RDL 651
L
Sbjct: 282 MHL 284
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 134/305 (43%), Gaps = 48/305 (15%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FEREA 419
E P I + +G G+FG V++ K G VAVKML A Q F+ E
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQAFKNEV 60
Query: 420 CLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+L + H NI+ +G KP + G SS+ +
Sbjct: 61 GVLRKTRHVNILLFMGYST--KPQLAIVTQWCEG-------------------SSLYHHL 99
Query: 480 HRV-PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
H + + LI IA Q A GM YL + +HRDL + N +++ + VKI DFGL+
Sbjct: 100 HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-- 157
Query: 539 YLQDYYKGD---ENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYY 592
++ + G E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY
Sbjct: 158 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL-PYS 215
Query: 593 GLTHEEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646
+ + + + ++ G +PD N P A+ LM C K RP F I ++
Sbjct: 216 NINNRDQIIFM-VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 274
Query: 647 IKRDL 651
+ R L
Sbjct: 275 LARSL 279
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 134/305 (43%), Gaps = 48/305 (15%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FEREA 419
E P I + +G G+FG V++ K G VAVKML A Q F+ E
Sbjct: 6 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQAFKNEV 57
Query: 420 CLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+L + H NI+ +G KP + G SS+ +
Sbjct: 58 GVLRKTRHVNILLFMGYST--KPQLAIVTQWCEG-------------------SSLYHHL 96
Query: 480 HRV-PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
H + + LI IA Q A GM YL + +HRDL + N +++ + VKI DFGL+
Sbjct: 97 HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-- 154
Query: 539 YLQDYYKGD---ENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYY 592
++ + G E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY
Sbjct: 155 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL-PYS 212
Query: 593 GLTHEEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646
+ + + + ++ G +PD N P A+ LM C K RP F I ++
Sbjct: 213 NINNRDQIIFM-VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 271
Query: 647 IKRDL 651
+ R L
Sbjct: 272 LARSL 276
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 134/305 (43%), Gaps = 48/305 (15%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FEREA 419
E P I + +G G+FG V++ K G VAVKML A Q F+ E
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQAFKNEV 60
Query: 420 CLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+L + H NI+ +G KP + G SS+ +
Sbjct: 61 GVLRKTRHVNILLFMGYST--KPQLAIVTQWCEG-------------------SSLYHHL 99
Query: 480 HRV-PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
H + + LI IA Q A GM YL + +HRDL + N +++ + VKI DFGL+
Sbjct: 100 HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-- 157
Query: 539 YLQDYYKGD---ENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYY 592
++ + G E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY
Sbjct: 158 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL-PYS 215
Query: 593 GLTHEEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646
+ + + + ++ G +PD N P A+ LM C K RP F I ++
Sbjct: 216 NINNRDQIIFM-VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 274
Query: 647 IKRDL 651
+ R L
Sbjct: 275 LARSL 279
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 134/305 (43%), Gaps = 48/305 (15%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FEREA 419
E P I + +G G+FG V++ K G VAVKML A Q F+ E
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQAFKNEV 55
Query: 420 CLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+L + H NI+ +G KP + G SS+ +
Sbjct: 56 GVLRKTRHVNILLFMGYST--KPQLAIVTQWCEG-------------------SSLYHHL 94
Query: 480 HRV-PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
H + + LI IA Q A GM YL + +HRDL + N +++ + VKI DFGL+
Sbjct: 95 HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-- 152
Query: 539 YLQDYYKGD---ENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYY 592
++ + G E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY
Sbjct: 153 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL-PYS 210
Query: 593 GLTHEEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646
+ + + + ++ G +PD N P A+ LM C K RP F I ++
Sbjct: 211 NINNRDQIIFM-VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269
Query: 647 IKRDL 651
+ R L
Sbjct: 270 LARSL 274
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 136/306 (44%), Gaps = 50/306 (16%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFERE 418
E P I + +G G+FG V++ K G VAVKML A + LQ F+ E
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQA-FKNE 82
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L + H NI+ +G KP + G SS+
Sbjct: 83 VGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEG-------------------SSLYHH 121
Query: 479 IHRV-PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+H + + LI IA Q A GM YL + +HRDL + N +++ + VKI DFGL+
Sbjct: 122 LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 179
Query: 538 MYLQDYYKGD---ENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPY 591
++ + G E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY
Sbjct: 180 -TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL-PY 237
Query: 592 YGLTHEEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+ + + + ++ G +PD N P A+ LM C K RP F I ++
Sbjct: 238 SNINNRDQIIFM-VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 296
Query: 646 NIKRDL 651
+ R L
Sbjct: 297 LLARSL 302
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 136/306 (44%), Gaps = 50/306 (16%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFERE 418
E P I + +G G+FG V++ K G VAVKML A + LQ F+ E
Sbjct: 31 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQA-FKNE 81
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L + H NI+ +G KP + G SS+
Sbjct: 82 VGVLRKTRHVNILLFMGYST--KPQLAIVTQWCEG-------------------SSLYHH 120
Query: 479 IHRV-PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+H + + LI IA Q A GM YL + +HRDL + N +++ + VKI DFGL+
Sbjct: 121 LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-- 178
Query: 538 MYLQDYYKGD---ENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPY 591
++ + G E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY
Sbjct: 179 -TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL-PY 236
Query: 592 YGLTHEEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+ + + + ++ G +PD N P A+ LM C K RP F I ++
Sbjct: 237 SNINNRDQIIFM-VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 295
Query: 646 NIKRDL 651
+ R L
Sbjct: 296 LLARSL 301
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 133/305 (43%), Gaps = 48/305 (15%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FEREA 419
E P I + +G G+FG V++ K G VAVKML A Q F+ E
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQAFKNEV 55
Query: 420 CLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+L + H NI+ +G P + G SS+ +
Sbjct: 56 GVLRKTRHVNILLFMGYSTA--PQLAIVTQWCEG-------------------SSLYHHL 94
Query: 480 HRV-PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
H + + LI IA Q A GM YL + +HRDL + N +++ + VKI DFGL+
Sbjct: 95 HIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-- 152
Query: 539 YLQDYYKGD---ENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYY 592
++ + G E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY
Sbjct: 153 -VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL-PYS 210
Query: 593 GLTHEEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646
+ + + + ++ G +PD N P A+ LM C K RP F I ++
Sbjct: 211 NINNRDQIIFM-VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269
Query: 647 IKRDL 651
+ R L
Sbjct: 270 LARSL 274
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 44/302 (14%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFERE 418
E P I + +G G+FG V++ K G VAVKML A + LQ F+ E
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQA-FKNE 70
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L + H NI+ +G + + ++ ++ C ++ + ++S
Sbjct: 71 VGVLRKTRHVNILLFMGYSTAPQ-LAIVTQW------------CEGSSLYHHLHASE--- 114
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
+ LI IA Q A GM YL + +HRDL + N +++ VKI DFGL+ +
Sbjct: 115 ----TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170
Query: 539 YLQDYYKGDENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
E + + WM E I N Y+ +SDV+AFG+ L+E+ + L PY +
Sbjct: 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL-PYSNIN 229
Query: 596 H-EEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
+ +++++ + G++ +PD N P + LM C K RPSF I + +
Sbjct: 230 NRDQIIEMVGRGSL--SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
Query: 649 RD 650
R+
Sbjct: 288 RE 289
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 51/288 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-----LAEFDH 427
+G+GAFG V +AK KD A + ++++ ER+A + L+ +H
Sbjct: 17 VGRGAFGVVCKAKW---------------RAKDVAIKQIESESERKAFIVELRQLSRVNH 61
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIVKL G C P+CL+ EY G L + L P Y ++ +S
Sbjct: 62 PNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA-----------MSW 108
Query: 488 CDLITIALQIASGMVYLSD---RKFVHRDLATRNCL-INDQMVVKIADFGLSRKMYLQDY 543
C LQ + G+ YL + +HRDL N L + V+KI DFG + +Q +
Sbjct: 109 C------LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD--IQTH 160
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY--YGLTHEEVVK 601
++ A WM E + Y+ + DV+++G+ LWE+ + +P+ G ++
Sbjct: 161 MTNNKGSAA---WMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEIGGPAFRIMW 216
Query: 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
+ G N P + LM CW+ P RPS I + + ++ R
Sbjct: 217 AVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 51/288 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-----LAEFDH 427
+G+GAFG V +AK KD A + ++++ ER+A + L+ +H
Sbjct: 16 VGRGAFGVVCKAKWRA---------------KDVAIKQIESESERKAFIVELRQLSRVNH 60
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIVKL G C P+CL+ EY G L + L P Y ++ +S
Sbjct: 61 PNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA-----------MSW 107
Query: 488 CDLITIALQIASGMVYLSD---RKFVHRDLATRNCL-INDQMVVKIADFGLSRKMYLQDY 543
C LQ + G+ YL + +HRDL N L + V+KI DFG + +Q +
Sbjct: 108 C------LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD--IQTH 159
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY--YGLTHEEVVK 601
++ A WM E + Y+ + DV+++G+ LWE+ + +P+ G ++
Sbjct: 160 MTNNKGSAA---WMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEIGGPAFRIMW 215
Query: 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
+ G N P + LM CW+ P RPS I + + ++ R
Sbjct: 216 AVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 137/290 (47%), Gaps = 39/290 (13%)
Query: 366 DIIYVRDLGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLA 423
D+I+ LGQG F ++F+ + G T V +K+L Y ++ FE A +++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE-AASMMS 67
Query: 424 EFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
+ H ++V GVC G L+ E++ G L+ +L+ N IN +
Sbjct: 68 KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK--KNKNCINILWK---------- 115
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI--------NDQMVVKIADFGLS 535
+ +A Q+A+ M +L + +H ++ +N L+ + +K++D G+S
Sbjct: 116 -------LEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFSFALQPYYGL 594
+ +D + + IP W+P E I K + +D W+FG LWEI S +P L
Sbjct: 169 ITVLPKDILQ----ERIP--WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL 222
Query: 595 THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +++ ++ + L AP L +L+ C + +P +RPSFR I + L
Sbjct: 223 DSQRKLQFYEDRHQLPAPKAA--ELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|2L0S|A Chain A, Solution Structure Of Human Plasminogen Kringle 3
Length = 83
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 184 TYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEE 243
TY C++G G Y+G V TV G CQ W A+ PH H R P FP N ENYCRN G+
Sbjct: 1 TYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHNRTPENFPSKNLDENYCRNPDGKR 60
Query: 244 PSPWCYTMDPNVRWQRCEIPTC 265
+PWC+T + VRW+ C+IP+C
Sbjct: 61 -APWCHTTNSQVRWEYCKIPSC 81
>pdb|4DUR|A Chain A, The X-Ray Crystal Structure Of Full-Length Type Ii Human
Plasminogen
pdb|4DUR|B Chain B, The X-Ray Crystal Structure Of Full-Length Type Ii Human
Plasminogen
pdb|4DUU|A Chain A, The X-Ray Crystal Structure Of Full-Length Type I Human
Plasminogen
pdb|4A5T|S Chain S, Structural Basis For The Conformational Modulation
Length = 791
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 184 TYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEE 243
TY C++G G Y+G V TV G CQ W A+ PH H R P FP N ENYCRN G+
Sbjct: 253 TYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHNRTPENFPCKNLDENYCRNPDGKR 312
Query: 244 PSPWCYTMDPNVRWQRCEIPTCADS 268
+PWC+T + VRW+ C+IP+C S
Sbjct: 313 -APWCHTTNSQVRWEYCKIPSCDSS 336
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 182 EITYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGG 241
E +C+ G Y G ++ T+ GL CQ WD++ PHAH P FP N +NYCRN
Sbjct: 161 ECEEECMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNP-D 219
Query: 242 EEPSPWCYTMDPNVRWQRCEIPTCA 266
E PWC+T DPN RW+ C+IP C
Sbjct: 220 RELRPWCFTTDPNKRWELCDIPRCT 244
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHE-RPPPVFPELNNSENYCRNAGGEEP 244
DC+ G G+ Y+G TTV G CQ W A+EPH H P P +NYCRN G+
Sbjct: 461 DCMFGNGKGYRGKRATTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVG 520
Query: 245 SPWCYTMDPNVRWQRCEIPTCA 266
PWCYT +P + C++P CA
Sbjct: 521 GPWCYTTNPRKLYDYCDVPQCA 542
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+C G G+ Y+GT++ T G+ CQ+W + PH P P ENYCRN +
Sbjct: 83 ECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQG 142
Query: 246 PWCYTMDPNVRWQRCEIPTCADS-MQDDVKSWGNKIKALLEQFLSQPY 292
PWCYT DP R+ C+I C + M +++ KI + Q +
Sbjct: 143 PWCYTTDPEKRYDYCDILECEEECMHCSGENYDGKISKTMSGLECQAW 190
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 151 ELPNCDTLPKYEVVNGKPTCSHAQLTEMKTDEIT---YDCIRGRGRFYQGTVNTTVGGLA 207
++P+CD+ P S QL E+T DC G G+ Y+GT +TT G
Sbjct: 329 KIPSCDSSP----------VSTEQLAPTAPPELTPVVQDCYHGDGQSYRGTSSTTTTGKK 378
Query: 208 CQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPTCAD 267
CQ W + PH H++ P +P + NYCRN ++ PWC+T DP+VRW+ C + C+
Sbjct: 379 CQSWSSMTPHRHQKTPENYPNAGLTMNYCRNPDADK-GPWCFTTDPSVRWEYCNLKKCSG 437
Query: 268 S 268
+
Sbjct: 438 T 438
>pdb|1KI0|A Chain A, The X-Ray Structure Of Human Angiostatin
Length = 253
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 184 TYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEE 243
TY C++G G Y+G V TV G CQ W A+ PH HER P FP N ENYCRN G+
Sbjct: 173 TYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHERTPENFPCKNLDENYCRNPDGKR 232
Query: 244 PSPWCYTMDPNVRWQRCEIPTC 265
+PWC+T + VRW+ C+IP+C
Sbjct: 233 -APWCHTTNSQVRWEYCKIPSC 253
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 182 EITYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGG 241
E +C+ G Y G ++ T+ GL CQ WD++ PHAH P FP N +NYCRN
Sbjct: 81 ECEEECMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNP-D 139
Query: 242 EEPSPWCYTMDPNVRWQRCEIPTCA 266
E PWC+T DPN RW+ C+IP C
Sbjct: 140 RELRPWCFTTDPNKRWELCDIPRCT 164
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+C G G+ Y+GT++ T G+ CQ+W + PH P P ENYCRN +
Sbjct: 3 ECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQG 62
Query: 246 PWCYTMDPNVRWQRCEIPTCADS-MQDDVKSWGNKIKALLEQFLSQ 290
PWCYT DP R+ C+I C + M +++ KI + Q
Sbjct: 63 PWCYTTDPEKRYDYCDILECEEECMHCSGENYDGKISKTMSGLECQ 108
>pdb|2QJ4|A Chain A, A Mechanistic Basis For Converting A Receptor Tyrosine
Kinase Agonist To An Antagonist
pdb|2QJ4|B Chain B, A Mechanistic Basis For Converting A Receptor Tyrosine
Kinase Agonist To An Antagonist
Length = 184
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+CI G+G Y+GTV+ T G+ CQ W++ PH H P + + ENYCRN GEE
Sbjct: 102 NCIIGKGGSYKGTVSITKSGIKCQPWNSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGG 161
Query: 246 PWCYTMDPNVRWQRCEIPTCAD 267
PWC+T +P VR++ C+IP C++
Sbjct: 162 PWCFTSNPEVRYEVCDIPQCSE 183
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 39/290 (13%)
Query: 366 DIIYVRDLGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLA 423
D+I+ LGQG F ++F+ + G T V +K+L Y ++ FE A +++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE-AASMMS 67
Query: 424 EFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
+ H ++V GVC G L+ E++ G L+ +L+ N IN +
Sbjct: 68 KLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLK--KNKNCINILWK---------- 115
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI--------NDQMVVKIADFGLS 535
+ +A Q+A M +L + +H ++ +N L+ + +K++D G+S
Sbjct: 116 -------LEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
Query: 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFSFALQPYYGL 594
+ +D + + IP W+P E I K + +D W+FG LWEI S +P L
Sbjct: 169 ITVLPKDILQ----ERIP--WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL 222
Query: 595 THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +++ ++ + L AP L +L+ C + +P +RPSFR I + L
Sbjct: 223 DSQRKLQFYEDRHQLPAPKAA--ELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|2KJ4|A Chain A, Solution Structure Of The Complex Of Vek-30 And
Plasminogen Kringle 2
Length = 87
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 182 EITYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGG 241
E + +C+ G G Y G ++ T+ GL CQ WD++ PHAH P FP N +NYCRN
Sbjct: 3 EFSEECMHGSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNP-D 61
Query: 242 EEPSPWCYTMDPNVRWQRCEIPTCA 266
+ PWC+T DPN RW+ C+IP CA
Sbjct: 62 RDLRPWCFTTDPNKRWEYCDIPRCA 86
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 50/306 (16%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK--DEASEYLQTDFERE 418
E ++++ +G G+FG V++ K G VAVK+LK D E Q F E
Sbjct: 32 EIEASEVMLSTRIGSGSFGTVYKGKWHGD--------VAVKILKVVDPTPEQFQA-FRNE 82
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L + H NI+ +G YM + +L + C SS+
Sbjct: 83 VAVLRKTRHVNILLFMG-------------YMTKDNLAIVTQWCEG--------SSLYKH 121
Query: 479 IH-RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
+H + + LI IA Q A GM YL + +HRD+ + N +++ + VKI DFGL+
Sbjct: 122 LHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT- 180
Query: 538 MYLQDYYKGDENDAIP---VRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPY 591
++ + G + P V WM E I N ++ +SDV+++G+ L+E+ + L PY
Sbjct: 181 --VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL-PY 237
Query: 592 YGLTHEEVVKYIKEGNILQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+ + + + ++ G +PD N P A+ L+ C RP F I ++
Sbjct: 238 SHINNRDQIIFM-VGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296
Query: 646 NIKRDL 651
++ L
Sbjct: 297 LLQHSL 302
>pdb|1GP9|A Chain A, A New Crystal Form Of The Nk1 Splice Variant Of HgfSF
Demonstrates Extensive Hinge Movement And Suggests That
The Nk1 Dimer Originates By Domain Swapping
pdb|1GP9|B Chain B, A New Crystal Form Of The Nk1 Splice Variant Of HgfSF
Demonstrates Extensive Hinge Movement And Suggests That
The Nk1 Dimer Originates By Domain Swapping
pdb|1GP9|C Chain C, A New Crystal Form Of The Nk1 Splice Variant Of HgfSF
Demonstrates Extensive Hinge Movement And Suggests That
The Nk1 Dimer Originates By Domain Swapping
pdb|1GP9|D Chain D, A New Crystal Form Of The Nk1 Splice Variant Of HgfSF
Demonstrates Extensive Hinge Movement And Suggests That
The Nk1 Dimer Originates By Domain Swapping
Length = 177
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+CI G+GR Y+GTV+ T G+ CQ W + PH H P + + ENYCRN GEE
Sbjct: 94 NCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGG 153
Query: 246 PWCYTMDPNVRWQRCEIPTCAD 267
PWC+T +P VR++ C+IP C++
Sbjct: 154 PWCFTSNPEVRYEVCDIPQCSE 175
>pdb|1GMN|A Chain A, Crystal Structures Of Nk1-Heparin Complexes Reveal The
Basis For Nk1 Activity And Enable Engineering Of Potent
Agonists Of The Met Receptor
pdb|1GMN|B Chain B, Crystal Structures Of Nk1-Heparin Complexes Reveal The
Basis For Nk1 Activity And Enable Engineering Of Potent
Agonists Of The Met Receptor
pdb|1GMO|A Chain A, Crystal Structures Of Nk1-Heparin Complexes Reveal The
Basis For Nk1 Activity And Enable Engineering Of Potent
Agonists Of The Met Receptor
pdb|1GMO|B Chain B, Crystal Structures Of Nk1-Heparin Complexes Reveal The
Basis For Nk1 Activity And Enable Engineering Of Potent
Agonists Of The Met Receptor
pdb|1GMO|C Chain C, Crystal Structures Of Nk1-Heparin Complexes Reveal The
Basis For Nk1 Activity And Enable Engineering Of Potent
Agonists Of The Met Receptor
pdb|1GMO|D Chain D, Crystal Structures Of Nk1-Heparin Complexes Reveal The
Basis For Nk1 Activity And Enable Engineering Of Potent
Agonists Of The Met Receptor
pdb|1GMO|E Chain E, Crystal Structures Of Nk1-Heparin Complexes Reveal The
Basis For Nk1 Activity And Enable Engineering Of Potent
Agonists Of The Met Receptor
pdb|1GMO|F Chain F, Crystal Structures Of Nk1-Heparin Complexes Reveal The
Basis For Nk1 Activity And Enable Engineering Of Potent
Agonists Of The Met Receptor
pdb|1GMO|G Chain G, Crystal Structures Of Nk1-Heparin Complexes Reveal The
Basis For Nk1 Activity And Enable Engineering Of Potent
Agonists Of The Met Receptor
pdb|1GMO|H Chain H, Crystal Structures Of Nk1-Heparin Complexes Reveal The
Basis For Nk1 Activity And Enable Engineering Of Potent
Agonists Of The Met Receptor
Length = 183
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+CI G+GR Y+GTV+ T G+ CQ W + PH H P + + ENYCRN GEE
Sbjct: 100 NCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGG 159
Query: 246 PWCYTMDPNVRWQRCEIPTCAD 267
PWC+T +P VR++ C+IP C++
Sbjct: 160 PWCFTSNPEVRYEVCDIPQCSE 181
>pdb|1BHT|A Chain A, Nk1 Fragment Of Human Hepatocyte Growth Factor
pdb|1BHT|B Chain B, Nk1 Fragment Of Human Hepatocyte Growth Factor
Length = 176
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+CI G+GR Y+GTV+ T G+ CQ W + PH H P + + ENYCRN GEE
Sbjct: 93 NCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGG 152
Query: 246 PWCYTMDPNVRWQRCEIPTCAD 267
PWC+T +P VR++ C+IP C++
Sbjct: 153 PWCFTSNPEVRYEVCDIPQCSE 174
>pdb|1NK1|A Chain A, Nk1 Fragment Of Human Hepatocyte Growth FactorSCATTER
Factor (HgfSF) AT 2.5 ANGSTROM RESOLUTION
pdb|1NK1|B Chain B, Nk1 Fragment Of Human Hepatocyte Growth FactorSCATTER
Factor (HgfSF) AT 2.5 ANGSTROM RESOLUTION
Length = 183
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+CI G+GR Y+GTV+ T G+ CQ W + PH H P + + ENYCRN GEE
Sbjct: 100 NCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGG 159
Query: 246 PWCYTMDPNVRWQRCEIPTCAD 267
PWC+T +P VR++ C+IP C++
Sbjct: 160 PWCFTSNPEVRYEVCDIPQCSE 181
>pdb|2QJ2|A Chain A, A Mechanistic Basis For Converting A Receptor Tyrosine
Kinase Agonist To An Antagonist
pdb|2QJ2|B Chain B, A Mechanistic Basis For Converting A Receptor Tyrosine
Kinase Agonist To An Antagonist
Length = 184
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+CI G+GR Y+GTV+ T G+ CQ W + PH H P + + ENYCRN GEE
Sbjct: 102 NCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGG 161
Query: 246 PWCYTMDPNVRWQRCEIPTCAD 267
PWC+T +P VR++ C+IP C++
Sbjct: 162 PWCFTSNPEVRYEVCDIPQCSE 183
>pdb|1I5K|A Chain A, Structure And Binding Determinants Of The Recombinant
Kringle-2 Domain Of Human Plasminogen To An Internal
Peptide From A Group A Streptococcal Surface Protein
pdb|1I5K|B Chain B, Structure And Binding Determinants Of The Recombinant
Kringle-2 Domain Of Human Plasminogen To An Internal
Peptide From A Group A Streptococcal Surface Protein
Length = 84
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 183 ITYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGE 242
+ +C+ G G Y G ++ T+ GL CQ WD++ PHAH P FP N +NYCRN
Sbjct: 1 FSEECMHGSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNP-DR 59
Query: 243 EPSPWCYTMDPNVRWQRCEIPTCA 266
+ PWC+T DPN RW+ C+IP CA
Sbjct: 60 DLRPWCFTTDPNKRWEYCDIPRCA 83
>pdb|1B2I|A Chain A, Kringle 2 Domain Of Human Plasminogen: Nmr Solution
Structure Of Trans-4-Aminomethylcyclohexane-1-Carboxylic
Acid (Amcha) Complex
Length = 83
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 183 ITYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGE 242
+ +C+ G G Y G ++ T+ GL CQ WD++ PHAH P FP N +NYCRN
Sbjct: 1 TSEECMHGSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNP-DR 59
Query: 243 EPSPWCYTMDPNVRWQRCEIPTCA 266
E PWC+T DPN RW+ C+IP C
Sbjct: 60 ELRPWCFTTDPNKRWELCDIPRCT 83
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +LG GAFG+V++AK E L A K+++ ++ E L+ D+ E +LA DHP
Sbjct: 16 VGELGDGAFGKVYKAK-----NKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPY 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLLG Y G L + C P ++ ++ + PQ+
Sbjct: 70 IVKLLGA------------YYHDGKLWIMIEFC-PGGAVDAIMLELDRGLTE-PQIQV-- 113
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ Q+ + +L ++ +HRDL N L+ + +++ADFG+S K L+ K D
Sbjct: 114 ---VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDSF 169
Query: 550 DAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
P WM E ++ Y ++D+W+ G+ L E+ P++ L V+ I
Sbjct: 170 IGTPY-WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE-PPHHELNPMRVLLKIA 227
Query: 605 EGN--ILQAPDNTPDALYDLMKLCWNMKPMNRPS 636
+ + L P D +K+ + P RPS
Sbjct: 228 KSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPS 261
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 43/292 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK---DEASEYLQTDFEREACLLAEFDHPN 429
+G+G FG V++ T VAVK L D +E L+ F++E ++A+ H N
Sbjct: 39 MGEGGFGVVYKGYVNN-------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+V+LLG + G +CL++ YM G L D L C ++GT P LS
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLS-C-----LDGT-----------PPLSWHM 134
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IA A+G+ +L + +HRD+ + N L+++ KI+DFGL+R
Sbjct: 135 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR 194
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFS--------------FALQPYYGLT 595
+M E+ L + T +SD+++FGV L EI + ++
Sbjct: 195 IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ + YI + + A + +A+Y + C + K RP + + Q L +
Sbjct: 254 EKTIEDYI-DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +LG GAFG+V++AK E L A K+++ ++ E L+ D+ E +LA DHP
Sbjct: 24 VGELGDGAFGKVYKAK-----NKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPY 77
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLLG Y G L + C P ++ ++ + PQ+
Sbjct: 78 IVKLLGA------------YYHDGKLWIMIEFC-PGGAVDAIMLELDRGLTE-PQIQV-- 121
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ Q+ + +L ++ +HRDL N L+ + +++ADFG+S K L+ K D
Sbjct: 122 ---VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK-NLKTLQKRDSF 177
Query: 550 DAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
P WM E ++ Y ++D+W+ G+ L E+ P++ L V+ I
Sbjct: 178 IGTPY-WMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE-PPHHELNPMRVLLKIA 235
Query: 605 EGN--ILQAPDNTPDALYDLMKLCWNMKPMNRPS 636
+ + L P D +K+ + P RPS
Sbjct: 236 KSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPS 269
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 43/292 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK---DEASEYLQTDFEREACLLAEFDHPN 429
+G+G FG V++ T VAVK L D +E L+ F++E ++A+ H N
Sbjct: 39 MGEGGFGVVYKGYVNN-------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+V+LLG + G +CL++ YM G L D L C ++GT P LS
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLS-C-----LDGT-----------PPLSWHM 134
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IA A+G+ +L + +HRD+ + N L+++ KI+DFGL+R
Sbjct: 135 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXR 194
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFS--------------FALQPYYGLT 595
+M E+ L + T +SD+++FGV L EI + ++
Sbjct: 195 IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 253
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ + YI + + A + +A+Y + C + K RP + + Q L +
Sbjct: 254 EKTIEDYI-DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 43/292 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK---DEASEYLQTDFEREACLLAEFDHPN 429
+G+G FG V++ T VAVK L D +E L+ F++E ++A+ H N
Sbjct: 33 MGEGGFGVVYKGYVNN-------TTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 85
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+V+LLG + G +CL++ YM G L D L C ++GT P LS
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLS-C-----LDGT-----------PPLSWHM 128
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IA A+G+ +L + +HRD+ + N L+++ KI+DFGL+R
Sbjct: 129 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXR 188
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFS--------------FALQPYYGLT 595
+M E+ L + T +SD+++FGV L EI + ++
Sbjct: 189 IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE 247
Query: 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
+ + YI + + A + +A+Y + C + K RP + + Q L +
Sbjct: 248 EKTIEDYI-DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2FEB|A Chain A, Nmr Solution Structure, Dynamics And Binding Properties Of
The Kringle Iv Type 8 Module Of Apolipoprotein(A)
Length = 102
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
DC RG G+ Y+GT++TT+ G CQ W + PH H R P +P + NYCRN E
Sbjct: 17 DCYRGDGQSYRGTLSTTITGRTCQSWSSMTPHWHRRIPLYYPNAGLTRNYCRNPDAEI-R 75
Query: 246 PWCYTMDPNVRWQRCEIPTC 265
PWCYTMDP+VRW+ C + C
Sbjct: 76 PWCYTMDPSVRWEYCNLTRC 95
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 146/310 (47%), Gaps = 58/310 (18%)
Query: 361 EFPR--------NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
EFP+ N+I Y + +G+G FG V + + L+K + + +L D E
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGR---LVKDKSVVAIKSLILGDSEGETEM 63
Query: 413 T----DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYI 468
+F+RE +++ +HPNIVKL G+ + P ++ E++ GDL
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL--MHNPPRMVMEFVPCGDL------------- 108
Query: 469 NGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRK--FVHRDLATRNCLI----- 521
Y + H + L+ L IA G+ Y+ ++ VHRDL + N +
Sbjct: 109 ---YHRLLDKAHPIKWSVKLRLM---LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 522 NDQMVVKIADFGLSRK-MYLQDYYKGDENDAIPVRWMPLESILYNK--YTVESDVWAFGV 578
N + K+ADFGLS++ ++ G+ +WM E+I + YT ++D ++F +
Sbjct: 163 NAPVCAKVADFGLSQQSVHSVSGLLGN------FQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 579 CLWEIFSFALQPYYGLTHEEVVKYI----KEGNILQAPDNTPDALYDLMKLCWNMKPMNR 634
L+ I + P+ ++ + +K+I +EG P++ P L ++++LCW+ P R
Sbjct: 217 ILYTILT-GEGPFDEYSYGK-IKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
Query: 635 PSFRTIYQTL 644
P F I + L
Sbjct: 275 PHFSYIVKEL 284
>pdb|3HN4|A Chain A, Crystal Structure Of The Nk2 Fragment (28-289) Of Human
Hepatocyte Growth FactorSCATTER FACTOR
Length = 264
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+C+ G Y+G ++ T G CQRWD + PH H+ P +P+ +NYCRN G +P
Sbjct: 185 ECMTANGESYRGLMDHTESGKICQRWDHQTPHRHKFLPERYPDKGFDDNYCRNPDG-QPR 243
Query: 246 PWCYTMDPNVRWQRCEIPTCA 266
PWCYT+DP+ RW+ C I TCA
Sbjct: 244 PWCYTLDPHTRWEYCAIKTCA 264
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+CI G G Y+GTV+ T G+ CQ W + PH H P + + ENYCRN GEE
Sbjct: 102 NCIIGEGESYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGG 161
Query: 246 PWCYTMDPNVRWQRCEIPTCAD 267
PWC+T +P VR++ C+IP C++
Sbjct: 162 PWCFTSNPEVRYEVCDIPQCSE 183
>pdb|1JFN|A Chain A, Solution Structure Of Human Apolipoprotein(A) Kringle Iv
Type 6
Length = 119
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
DC G G+ Y+G+ +TTV G CQ W + PH H+R +P + NYCRN E S
Sbjct: 24 DCYHGDGQSYRGSFSTTVTGRTCQSWSSMTPHWHQRTTEYYPNGGLTRNYCRNPDAEI-S 82
Query: 246 PWCYTMDPNVRWQRCEIPTC 265
PWCYTMDPNVRW+ C + C
Sbjct: 83 PWCYTMDPNVRWEYCNLTQC 102
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 112/271 (41%), Gaps = 42/271 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY---------LQTDFEREAC 420
VR LG GA+G V K H E + +K + + Y + E
Sbjct: 41 VRKLGSGAYGEVLLCKEKN--GHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS 98
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
LL DHPNI+KL V K L+ E+ G+L E I+
Sbjct: 99 LLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL-------------------FEQIIN 139
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRK 537
R + CD I QI SG+ YL VHRD+ N L+ N + +KI DFGLS
Sbjct: 140 R-HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS- 197
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
+ +DY D + + +L KY + DVW+ GV ++ I P+ G +
Sbjct: 198 FFSKDY---KLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMY-ILLCGYPPFGGQNDQ 253
Query: 598 EVVKYIKEGNI---LQAPDNTPDALYDLMKL 625
+++K +++G N D +L+KL
Sbjct: 254 DIIKKVEKGKYYFDFNDWKNISDEAKELIKL 284
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 48/229 (20%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+ +G+G +G V++A+ E F L +++ K++ E + + RE +L E H N
Sbjct: 7 LEKIGEGTYGVVYKAQNN---YGETFALKKIRLEKED--EGIPSTTIREISILKELKHSN 61
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKL V K + L+FE++ + DL L +C +ES +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCE---------GGLESVTAK-------- 103
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ LQ+ +G+ Y DR+ +HRDL +N LIN + +KIADFGL+R
Sbjct: 104 --SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF----------- 150
Query: 550 DAIPVR---------WMPLESILYN--KYTVESDVWAFGVCLWEIFSFA 587
IPVR W +L KY+ D+W+ G E+ + A
Sbjct: 151 -GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGA 198
>pdb|3MKP|A Chain A, Crystal Structure Of 1k1 Mutant Of Hepatocyte Growth
FactorSCATTER Factor Fragment Nk1 In Complex With
Heparin
pdb|3MKP|B Chain B, Crystal Structure Of 1k1 Mutant Of Hepatocyte Growth
FactorSCATTER Factor Fragment Nk1 In Complex With
Heparin
pdb|3MKP|C Chain C, Crystal Structure Of 1k1 Mutant Of Hepatocyte Growth
FactorSCATTER Factor Fragment Nk1 In Complex With
Heparin
pdb|3MKP|D Chain D, Crystal Structure Of 1k1 Mutant Of Hepatocyte Growth
FactorSCATTER Factor Fragment Nk1 In Complex With
Heparin
Length = 183
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+CI G G Y+GTV+ T G+ CQ W + PH H P + + ENYCRN GEE
Sbjct: 100 NCIIGEGESYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGG 159
Query: 246 PWCYTMDPNVRWQRCEIPTCAD 267
PWC+T +P VR++ C+IP C++
Sbjct: 160 PWCFTSNPEVRYEVCDIPQCSE 181
>pdb|3SP8|A Chain A, Crystal Structure Of Nk2 In Complex With Fractionated
Heparin Dp10
pdb|3SP8|B Chain B, Crystal Structure Of Nk2 In Complex With Fractionated
Heparin Dp10
Length = 264
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+C+ G Y+G ++ T G CQRWD + PH H+ P +P+ +NYCRN G +P
Sbjct: 185 ECMTSNGESYRGLMDHTESGKICQRWDHQTPHRHKFLPERYPDKGFDDNYCRNPDG-QPR 243
Query: 246 PWCYTMDPNVRWQRCEIPTC 265
PWCYT+DP+ RW+ C+I TC
Sbjct: 244 PWCYTLDPHTRWEYCKIKTC 263
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+CI G+GR Y+GTV+ T + CQ W + PH H P + + ENYCRN GEE
Sbjct: 102 NCIIGKGRSYKGTVSITKSDIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGG 161
Query: 246 PWCYTMDPNVRWQRCEIPTCAD 267
PWC+T +P VR++ C+IP C++
Sbjct: 162 PWCFTSNPEVRYEVCDIPQCSE 183
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+ +G+G +G V++A+ E F L +++ K++ E + + RE +L E H N
Sbjct: 7 LEKIGEGTYGVVYKAQNN---YGETFALKKIRLEKED--EGIPSTTIREISILKELKHSN 61
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKL V K + L+FE++ + DL L +C +ES +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCE---------GGLESVTAK-------- 103
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ LQ+ +G+ Y DR+ +HRDL +N LIN + +KIADFGL+R
Sbjct: 104 --SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF----------- 150
Query: 550 DAIPVR---------WMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
IPVR W +L KY+ D+W+ G E+ +
Sbjct: 151 -GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|3HKL|A Chain A, Crystal Structure Of The Frizzled-Like Cysteine-Rich
Domain Of Musk
pdb|3HKL|B Chain B, Crystal Structure Of The Frizzled-Like Cysteine-Rich
Domain Of Musk
Length = 197
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 32 QGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMALWKEMIAILANPCKQAAE 91
+GYC+QY G++C L + V+FN+S + E ++ W E+ A+ + C+ AAE
Sbjct: 17 KGYCAQYRGEVCDAVLVKDSLVFFNTSYPDPE-EAQELLIHTAWNELKAV-SPLCRPAAE 74
Query: 92 KLLCTYAFPQCVTSNGIPMSLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHF- 150
LLC + F +C + +P +P+C E C+AV+ FC +W +E RG+ ++S HF
Sbjct: 75 ALLCNHLFQEC-SPGVLPTPMPICREYCLAVKELFCAKEWLAMEGKTHRGL-YRSGMHFL 132
Query: 151 ELPNCDTLPKYEVVNGKPT-CSHAQLTEMKTDEIT 184
+P C LP ++ PT C+ + K + IT
Sbjct: 133 PVPECSKLPS---MHQDPTACTRLPYLDYKKENIT 164
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+ +G+G +G V++A+ E F L +++ K++ E + + RE +L E H N
Sbjct: 7 LEKIGEGTYGVVYKAQNN---YGETFALKKIRLEKED--EGIPSTTIREISILKELKHSN 61
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKL V K + L+FE++ + DL L +C +ES +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCE---------GGLESVTAK-------- 103
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ LQ+ +G+ Y DR+ +HRDL +N LIN + +KIADFGL+R
Sbjct: 104 --SFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF----------- 150
Query: 550 DAIPVR---------WMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
IPVR W +L KY+ D+W+ G E+ +
Sbjct: 151 -GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 145/310 (46%), Gaps = 58/310 (18%)
Query: 361 EFPR--------NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
EFP+ N+I Y + +G+G FG V + + L+K + + +L D E
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGR---LVKDKSVVAIKSLILGDSEGETEM 63
Query: 413 T----DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYI 468
+F+RE +++ +HPNIVKL G+ + P ++ E++ GDL
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL--MHNPPRMVMEFVPCGDL------------- 108
Query: 469 NGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRK--FVHRDLATRNCLI----- 521
Y + H + L+ L IA G+ Y+ ++ VHRDL + N +
Sbjct: 109 ---YHRLLDKAHPIKWSVKLRLM---LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 522 NDQMVVKIADFGLSRK-MYLQDYYKGDENDAIPVRWMPLESILYNK--YTVESDVWAFGV 578
N + K+ADFG S++ ++ G+ +WM E+I + YT ++D ++F +
Sbjct: 163 NAPVCAKVADFGTSQQSVHSVSGLLGN------FQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 579 CLWEIFSFALQPYYGLTHEEVVKYI----KEGNILQAPDNTPDALYDLMKLCWNMKPMNR 634
L+ I + P+ ++ + +K+I +EG P++ P L ++++LCW+ P R
Sbjct: 217 ILYTILT-GEGPFDEYSYGK-IKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
Query: 635 PSFRTIYQTL 644
P F I + L
Sbjct: 275 PHFSYIVKEL 284
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT--DFEREACLLAEFDHPNI 430
LG G FG+V K L H+ VAVK+L + L RE L F HP+I
Sbjct: 24 LGVGTFGKVKVGKHE-LTGHK----VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
+KL V + + ++ EY+ G+L D+ IC NG ES R+ Q
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDY--ICK-----NGRLDEKESR--RLFQ------ 123
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK---GD 547
QI SG+ Y VHRDL N L++ M KIADFGLS M ++ + G
Sbjct: 124 -----QILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGS 178
Query: 548 ENDAIPVRWMPLESILYNKYT-VESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
N A P E I Y E D+W+ GV L+ + L P+ + K I +G
Sbjct: 179 PNYAAP------EVISGRLYAGPEVDIWSSGVILYALLCGTL-PFDDDHVPTLFKKICDG 231
Query: 607 NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL 651
I P ++ L+K + PM R + + I + W K+DL
Sbjct: 232 -IFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEW-FKQDL 274
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 145/310 (46%), Gaps = 58/310 (18%)
Query: 361 EFPR--------NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
EFP+ N+I Y + +G+G FG V + + L+K + + +L D E
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGR---LVKDKSVVAIKSLILGDSEGETEM 63
Query: 413 T----DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYI 468
+F+RE +++ +HPNIVKL G+ + P ++ E++ GDL
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGL--MHNPPRMVMEFVPCGDL------------- 108
Query: 469 NGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRK--FVHRDLATRNCLI----- 521
Y + H + L+ L IA G+ Y+ ++ VHRDL + N +
Sbjct: 109 ---YHRLLDKAHPIKWSVKLRLM---LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE 162
Query: 522 NDQMVVKIADFGLSRK-MYLQDYYKGDENDAIPVRWMPLESILYNK--YTVESDVWAFGV 578
N + K+ADF LS++ ++ G+ +WM E+I + YT ++D ++F +
Sbjct: 163 NAPVCAKVADFSLSQQSVHSVSGLLGN------FQWMAPETIGAEEESYTEKADTYSFAM 216
Query: 579 CLWEIFSFALQPYYGLTHEEVVKYI----KEGNILQAPDNTPDALYDLMKLCWNMKPMNR 634
L+ I + P+ ++ + +K+I +EG P++ P L ++++LCW+ P R
Sbjct: 217 ILYTILT-GEGPFDEYSYGK-IKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
Query: 635 PSFRTIYQTL 644
P F I + L
Sbjct: 275 PHFSYIVKEL 284
>pdb|4IUA|A Chain A, Crystal Structure Of The Nk2 Fragment (31-290) Of The
Mouse Hepatocyte Growth Factor/scatter Factor
pdb|4IUA|B Chain B, Crystal Structure Of The Nk2 Fragment (31-290) Of The
Mouse Hepatocyte Growth Factor/scatter Factor
pdb|4IUA|C Chain C, Crystal Structure Of The Nk2 Fragment (31-290) Of The
Mouse Hepatocyte Growth Factor/scatter Factor
pdb|4IUA|D Chain D, Crystal Structure Of The Nk2 Fragment (31-290) Of The
Mouse Hepatocyte Growth Factor/scatter Factor
pdb|4IUA|E Chain E, Crystal Structure Of The Nk2 Fragment (31-290) Of The
Mouse Hepatocyte Growth Factor/scatter Factor
pdb|4IUA|F Chain F, Crystal Structure Of The Nk2 Fragment (31-290) Of The
Mouse Hepatocyte Growth Factor/scatter Factor
pdb|4IUA|G Chain G, Crystal Structure Of The Nk2 Fragment (31-290) Of The
Mouse Hepatocyte Growth Factor/scatter Factor
pdb|4IUA|H Chain H, Crystal Structure Of The Nk2 Fragment (31-290) Of The
Mouse Hepatocyte Growth Factor/scatter Factor
Length = 262
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+C+ G Y+G ++ T G CQRWD + PH H+ P +P+ +NYCRN G +P
Sbjct: 183 ECMTANGESYRGPMDHTESGKTCQRWDQQTPHRHKFLPERYPDKGFDDNYCRNPDG-KPR 241
Query: 246 PWCYTMDPNVRWQRCEIPTCA 266
PWCYT+DP+ W+ C I TCA
Sbjct: 242 PWCYTLDPDTPWEYCAIKTCA 262
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+CI G+G Y+GTV+ T G+ CQ W++ PH H P + + ENYCRN GEE
Sbjct: 100 NCIIGKGGSYKGTVSITKSGIKCQPWNSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGG 159
Query: 246 PWCYTMDPNVRWQRCEIPTCAD 267
PWC+T +P VR++ C+IP C++
Sbjct: 160 PWCFTSNPEVRYEVCDIPQCSE 181
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 35/240 (14%)
Query: 368 IYVRDLGQGAFGRVFQAKAPGLLKHEEFT--LVAVKMLKDEASEYLQTDFEREACLLAEF 425
I + LG+G + V++ K+ + T LVA+K ++ E E RE LL +
Sbjct: 5 IKLDKLGEGTYATVYKGKS-------KLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL 57
Query: 426 DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQL 485
H NIV L + K + L+FEY+ + DL +L C N IN +H V
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCG--NIIN---------MHNVK-- 103
Query: 486 STCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK 545
Q+ G+ Y +K +HRDL +N LIN++ +K+ADFGL+R + K
Sbjct: 104 ------LFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 155
Query: 546 GDENDAIPVRWMPLESIL-YNKYTVESDVWAFGVCLWEIFSFALQPYY-GLTHEEVVKYI 603
+N+ + + + P + +L Y+ + D+W G +E+ + +P + G T EE + +I
Sbjct: 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG--RPLFPGSTVEEQLHFI 213
>pdb|2DOH|X Chain X, The X-Ray Crystallographic Structure Of The Angiogenesis
Inhibitor, Angiostatin, Bound A To A Peptide From The
Group A Streptococcal Surface Protein Pam
pdb|2DOI|X Chain X, The X-Ray Crystallographic Structure Of The Angiogenesis
Inhibitor, Angiostatin, Bound To A Peptide From The
Group A Streptococcus Protein Pam
pdb|2DOI|A Chain A, The X-Ray Crystallographic Structure Of The Angiogenesis
Inhibitor, Angiostatin, Bound To A Peptide From The
Group A Streptococcus Protein Pam
Length = 234
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 182 EITYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGG 241
E +C+ G Y G ++ T+ GL CQ WD++ PHAH P FP N +NYCRN
Sbjct: 81 ECEEECMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNP-D 139
Query: 242 EEPSPWCYTMDPNVRWQRCEIPTCA 266
E PWC+T DPN RW+ C+IP C
Sbjct: 140 RELRPWCFTTDPNKRWELCDIPRCT 164
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+C G G+ Y+GT++ T G+ CQ+W + PH P P ENYCRN +
Sbjct: 3 ECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQG 62
Query: 246 PWCYTMDPNVRWQRCEIPTCADS-MQDDVKSWGNKIKALLEQFLSQ 290
PWCYT DP R+ C+I C + M +++ KI + Q
Sbjct: 63 PWCYTTDPEKRYDYCDILECEEECMHCSGENYDGKISKTMSGLECQ 108
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 36/59 (61%)
Query: 184 TYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGE 242
TY C++G G Y+G V TV G CQ W A+ PH HER P FP N ENYCRN G+
Sbjct: 173 TYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHERTPENFPCKNLDENYCRNPDGK 231
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 45/293 (15%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG+G FG+V++ + + TLVAVK LK+E + + F+ E +++ H N+++
Sbjct: 46 LGRGGFGKVYKGRLA------DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLR 99
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLIT 492
L G C L++ YM G + LR ES P L
Sbjct: 100 LRGFCMTPTERLLVYPYMANGSVASCLR------------ERPESQ----PPLDWPKRQR 143
Query: 493 IALQIASGMVYLSDR---KFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IAL A G+ YL D K +HRD+ N L++++ + DFGL++ M +D +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI------FSFA----------LQPYYG 593
P E + K + ++DV+ +GV L E+ F A L G
Sbjct: 204 RGTIGHIAP-EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 594 LTHEEVVKYIKEGNILQA--PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
L E+ ++ + + + LQ D + L + LC PM RP + + L
Sbjct: 263 LLKEKKLEALVDVD-LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 374 GQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK---DEASEYLQTDFEREACLLAEFDHPNI 430
G+G FG V++ T VAVK L D +E L+ F++E + A+ H N+
Sbjct: 31 GEGGFGVVYKGYVNN-------TTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENL 83
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
V+LLG + G +CL++ Y G L D L C ++GT P LS
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLDRLS-C-----LDGT-----------PPLSWHXR 126
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR--KMYLQDYYKGDE 548
IA A+G+ +L + +HRD+ + N L+++ KI+DFGL+R + + Q
Sbjct: 127 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXX--- 183
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFS--------------FALQPYYGL 594
+ + L + T +SD+++FGV L EI + ++
Sbjct: 184 SRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 243
Query: 595 THEEVVKYI-KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ + YI K+ N A + +A Y + C + K RP + + Q L
Sbjct: 244 EEKTIEDYIDKKXN--DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 41/285 (14%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLV--AVKML-KDEASEYLQTDFEREACLLAEFD 426
V+ LG GA+G V LL ++ T V A+K++ K S + E +L D
Sbjct: 42 VKKLGSGAYGEV-------LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD 94
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
HPNI+KL + L+ E G+L D + IHR+ + +
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI-------------------IHRM-KFN 134
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MVVKIADFGLSRKMYLQDY 543
D I Q+ SG+ YL VHRDL N L+ + ++KI DFGLS Q
Sbjct: 135 EVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
K + + + +L KY + DVW+ GV L+ I P+ G T +E+++ +
Sbjct: 195 MK----ERLGTAYYIAPEVLRKKYDEKCDVWSIGVILF-ILLAGYPPFGGQTDQEILRKV 249
Query: 604 KEGN-ILQAPD--NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
++G +P+ N + DL+K R S + + W
Sbjct: 250 EKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294
>pdb|1I71|A Chain A, High Resolution Crystal Structure Of Apolipoprotein(A)
Kringle Iv Type 7: Insights Into Ligand Binding
Length = 83
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
DC G G+ Y+G+ +TTV G CQ W + PH H+R +P + NYCRN E
Sbjct: 1 DCYHGDGQSYRGSFSTTVTGRTCQSWSSMTPHWHQRTTEYYPNGGLTRNYCRNPDAEI-R 59
Query: 246 PWCYTMDPNVRWQRCEIPTC 265
PWCYTMDP+VRW+ C + C
Sbjct: 60 PWCYTMDPSVRWEYCNLTQC 79
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 29/280 (10%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
P + +G+G+FG VF+ + + +VA+K++ E +E D ++E +L
Sbjct: 20 PEELFTKLEKIGKGSFGEVFKG-----IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 74
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
++ D P + K G + ++ EY+G G D L
Sbjct: 75 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------------------- 115
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
L + TI +I G+ YL K +HRD+ N L+++ VK+ADFG++ ++
Sbjct: 116 --LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDT 172
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K + P WM E I + Y ++D+W+ G+ E+ + P+ L +V+
Sbjct: 173 QIKRNXFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFL 230
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
I + N N L + ++ C N +P RP+ + + +
Sbjct: 231 IPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 29/280 (10%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
P + +G+G+FG VF+ + + +VA+K++ E +E D ++E +L
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKG-----IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 59
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
++ D P + K G + ++ EY+G G D L
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------------------- 100
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
L + TI +I G+ YL K +HRD+ N L+++ VK+ADFG++ ++
Sbjct: 101 --LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDT 157
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K + P WM E I + Y ++D+W+ G+ E+ + P+ L +V+
Sbjct: 158 QIKRNXFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFL 215
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
I + N N L + ++ C N +P RP+ + + +
Sbjct: 216 IPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 29/280 (10%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
P + +G+G+FG VF+ + + +VA+K++ E +E D ++E +L
Sbjct: 5 PEELFTKLEKIGKGSFGEVFKG-----IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 59
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
++ D P + K G + ++ EY+G G D L
Sbjct: 60 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------------------- 100
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
L + TI +I G+ YL K +HRD+ N L+++ VK+ADFG++ ++
Sbjct: 101 --LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDT 157
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K + P WM E I + Y ++D+W+ G+ E+ + P+ L +V+
Sbjct: 158 QIKRNTFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFL 215
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
I + N N L + ++ C N +P RP+ + + +
Sbjct: 216 IPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 45/309 (14%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE 416
L +L+ ++ LG+G FG+V++ + + LVAVK LK+E ++ + F+
Sbjct: 22 LRELQVASDNFXNKNILGRGGFGKVYKGRLA------DGXLVAVKRLKEERTQGGELQFQ 75
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
E +++ H N+++L G C L++ YM G + LR E
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR------------ERPE 123
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDR---KFVHRDLATRNCLINDQMVVKIADFG 533
S P L IAL A G+ YL D K +HRD+ N L++++ + DFG
Sbjct: 124 SQ----PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI------FSFA 587
L++ M +D + P E + K + ++DV+ +GV L E+ F A
Sbjct: 180 LAKLMDYKDXHVXXAVRGXIGHIAP-EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 238
Query: 588 ----------LQPYYGLTHEEVVKYIKEGNILQA--PDNTPDALYDLMKLCWNMKPMNRP 635
L GL E+ ++ + + + LQ D + L + LC PM RP
Sbjct: 239 RLANDDDVMLLDWVKGLLKEKKLEALVDVD-LQGNYKDEEVEQLIQVALLCTQSSPMERP 297
Query: 636 SFRTIYQTL 644
+ + L
Sbjct: 298 KMSEVVRML 306
>pdb|1KIV|A Chain A, Recombinant Kringle Iv-10M66 VARIANT OF HUMAN
Apolipoprotein(A)
Length = 78
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSP 246
C G G+ Y+GT +TTV G CQ W + PH H+R P +P + NYCRN + P
Sbjct: 1 CYHGNGQSYRGTFSTTVTGRTCQSWSSMTPHRHQRTPENYPNDGLTMNYCRNPDADT-GP 59
Query: 247 WCYTMDPNVRWQRCEIPTC 265
WC+TMDP++RW+ C + C
Sbjct: 60 WCFTMDPSIRWEYCNLTRC 78
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 59/297 (19%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK-DEASEYLQTDFEREACLLAEFDHP 428
+ +G+G +G VF+AK E +VA+K ++ D+ E + + RE CLL E H
Sbjct: 7 LEKIGEGTYGTVFKAK-----NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
NIV+L V K + L+FE+ + DL + C NG P++
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSC------NGDLD---------PEI--- 102
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
+ + Q+ G+ + R +HRDL +N LIN +K+ADFGL+R
Sbjct: 103 -VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAF---------- 151
Query: 549 NDAIPVR---------WMPLESILYNK--YTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597
IPVR W +L+ Y+ D+W+ G E+ + A + G +
Sbjct: 152 --GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVD 209
Query: 598 EVVKYI----------KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ +K I + ++ + PD P +Y N+ P + R + Q L
Sbjct: 210 DQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNL 266
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 29/280 (10%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
P + +G+G+FG VF+ + + +VA+K++ E +E D ++E +L
Sbjct: 25 PEELFTKLEKIGKGSFGEVFKG-----IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 79
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
++ D P + K G + ++ EY+G G D L
Sbjct: 80 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP------------------- 120
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
L + TI +I G+ YL K +HRD+ N L+++ VK+ADFG++ ++
Sbjct: 121 --LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDT 177
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K + P WM E I + Y ++D+W+ G+ E+ + P+ L +V+
Sbjct: 178 QIKRNTFVGTPF-WMAPEVIKQSAYDSKADIWSLGITAIEL-ARGEPPHSELHPMKVLFL 235
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
I + N N L + ++ C N +P RP+ + + +
Sbjct: 236 IPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 114/287 (39%), Gaps = 38/287 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD--FEREACLLAEFDH 427
V+ LG GA+G V K L E A+K++K + E +L + DH
Sbjct: 26 VKKLGSGAYGEVLLCKDK-LTGAER----AIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNI+KL + L+ E G+L D I + S
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFD--------------------EIILRQKFSE 120
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MVVKIADFGLSRKMYLQDYY 544
D I Q+ SG YL VHRDL N L+ + ++KI DFGLS +
Sbjct: 121 VDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG--- 177
Query: 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
G + + + +L KY + DVW+ GV L+ I P+ G T +E++K ++
Sbjct: 178 -GKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKRVE 235
Query: 605 EGNI-LQAPD--NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
+G PD D L+KL +P R S W +K
Sbjct: 236 KGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVK 282
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 11 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ DL DF+ S++ +P
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSM-DLKDFMD---------------ASALTGIP----LP 106
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 156
Query: 549 NDAIPVR---------WMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 157 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+G+FG+V A + ++ K+L A +Q ERE L HP+
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL---AKSDMQGRIEREISYLRLLRHPH 74
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I+KL V + ++ EY G N+ +YI E R Q
Sbjct: 75 IIKLYDVIKSKDEIIMVIEYAG----NELF------DYIVQRDKMSEQEARRFFQ----- 119
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK---G 546
QI S + Y K VHRDL N L+++ + VKIADFGLS M ++ K G
Sbjct: 120 ------QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 173
Query: 547 DENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N A P E I Y E DVW+ GV L+ + L P+ + + K I
Sbjct: 174 SPNYAAP------EVISGKLYAGPEVDVWSCGVILYVMLCRRL-PFDDESIPVLFKNISN 226
Query: 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P L+K + P+NR S I Q W
Sbjct: 227 G-VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+G+FG+V A + ++ K+L A +Q ERE L HP+
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL---AKSDMQGRIEREISYLRLLRHPH 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I+KL V + ++ EY G N+ +YI E R Q
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYAG----NELF------DYIVQRDKMSEQEARRFFQ----- 110
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK---G 546
QI S + Y K VHRDL N L+++ + VKIADFGLS M ++ K G
Sbjct: 111 ------QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 164
Query: 547 DENDAIPVRWMPLESILYNKYT-VESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N A P E I Y E DVW+ GV L+ + L P+ + + K I
Sbjct: 165 SPNYAAP------EVISGKLYAGPEVDVWSCGVILYVMLCRRL-PFDDESIPVLFKNISN 217
Query: 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P L+K + P+NR S I Q W
Sbjct: 218 G-VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 256
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 10 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ DL DF+ S++ +P
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSM-DLKDFMD---------------ASALTGIP----LP 105
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 155
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 156 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+G+FG+V A + ++ K+L A +Q ERE L HP+
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL---AKSDMQGRIEREISYLRLLRHPH 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I+KL V + ++ EY G N+ +YI E R Q
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYAG----NELF------DYIVQRDKMSEQEARRFFQ----- 114
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK---G 546
QI S + Y K VHRDL N L+++ + VKIADFGLS M ++ K G
Sbjct: 115 ------QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 168
Query: 547 DENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N A P E I Y E DVW+ GV L+ + L P+ + + K I
Sbjct: 169 SPNYAAP------EVISGKLYAGPEVDVWSCGVILYVMLCRRL-PFDDESIPVLFKNISN 221
Query: 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P L+K + P+NR S I Q W
Sbjct: 222 G-VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 260
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 116/280 (41%), Gaps = 36/280 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+G+FG+V A + ++ K+L A +Q ERE L HP+
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL---AKSDMQGRIEREISYLRLLRHPH 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I+KL V + ++ EY G N+ +YI E R Q
Sbjct: 76 IIKLYDVIKSKDEIIMVIEYAG----NELF------DYIVQRDKMSEQEARRFFQ----- 120
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK---G 546
QI S + Y K VHRDL N L+++ + VKIADFGLS M ++ K G
Sbjct: 121 ------QIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 174
Query: 547 DENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N A P E I Y E DVW+ GV L+ + L P+ + + K I
Sbjct: 175 SPNYAAP------EVISGKLYAGPEVDVWSCGVILYVMLCRRL-PFDDESIPVLFKNISN 227
Query: 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P L+K + P+NR S I Q W
Sbjct: 228 G-VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 266
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 115/282 (40%), Gaps = 43/282 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 19 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY RG++ L+ S + + T
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS-----------------KFDEQRTAT 117
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG------LSRKMYLQDY 543
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG SR+ L
Sbjct: 118 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXG- 173
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 174 ---------TLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 223
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 224 SRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 8 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 63
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL DF+ S++ +P
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKDFMD---------------ASALTGIP----LP 103
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL N LIN + +K+ADFGL+R
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---------- 153
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 154 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 122/289 (42%), Gaps = 43/289 (14%)
Query: 368 IYVRDLGQGAFGRV--FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF 425
I+ R LG GAFG V + ++ GL + +K + + S+ E E +L
Sbjct: 25 IFKRKLGSGAFGDVHLVEERSSGLER-------VIKTINKDRSQVPMEQIEAEIEVLKSL 77
Query: 426 DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQL 485
DHPNI+K+ V M ++ E G+L + RI S R L
Sbjct: 78 DHPNIIKIFEVFEDYHNMYIVMETCEGGELLE--RIVSAQA--------------RGKAL 121
Query: 486 STCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND---QMVVKIADFGLSRKMYLQD 542
S + + Q+ + + Y + VH+DL N L D +KI DFGL+ +
Sbjct: 122 SEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA------E 175
Query: 543 YYKGDE---NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
+K DE N A +M E + T + D+W+ GV ++ + + L P+ G + EEV
Sbjct: 176 LFKSDEHSTNAAGTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCL-PFTGTSLEEV 233
Query: 600 ---VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
Y + ++ TP A+ DL+K P RPS + W
Sbjct: 234 QQKATYKEPNYAVECRPLTPQAV-DLLKQMLTKDPERRPSAAQVLHHEW 281
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 31/265 (11%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD---EASEYLQTDFEREACLLAEFDHPN 429
LGQG+FG+VF K + + L A+K+LK + + ++T ER+ +L E +HP
Sbjct: 32 LGQGSFGKVFLVKK--ISGSDARQLYAMKVLKKATLKVRDRVRTKMERD--ILVEVNHPF 87
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKL + L+ +++ GDL F R+ + + D
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMF------------------TEED 127
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ ++A + +L ++RDL N L++++ +K+ DFGLS++ D+ K +
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYS 185
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
V +M E + +T +D W+FGV ++E+ + L P+ G +E + I + +
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL-PFQGKDRKETMTMILKAKLG 244
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNR 634
+P+A L+++ + P NR
Sbjct: 245 MPQFLSPEA-QSLLRMLFKRNPANR 268
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 45/269 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+ +LG GAFG+V++A+ E L A K++ ++ E L+ D+ E +LA DHPN
Sbjct: 42 IGELGDGAFGKVYKAQ-----NKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPN 95
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLND-FLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
IVKLL + +L E+ G ++ L + P L+
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--------------------LTES 135
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS----RKMYLQDYY 544
+ + Q + YL D K +HRDL N L +K+ADFG+S R + +D +
Sbjct: 136 QIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 195
Query: 545 KGDENDAIPVRWMPLESILYNK-----YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
G WM E ++ Y ++DVW+ G+ L E+ P++ L V
Sbjct: 196 IG------TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE-PPHHELNPMRV 248
Query: 600 VKYIKEGN--ILQAPDNTPDALYDLMKLC 626
+ I + L P D +K C
Sbjct: 249 LLKIAKSEPPTLAQPSRWSSNFKDFLKKC 277
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 45/269 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+ +LG GAFG+V++A+ E L A K++ ++ E L+ D+ E +LA DHPN
Sbjct: 42 IGELGDGAFGKVYKAQ-----NKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPN 95
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLND-FLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
IVKLL + +L E+ G ++ L + P L+
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--------------------LTES 135
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS----RKMYLQDYY 544
+ + Q + YL D K +HRDL N L +K+ADFG+S R + +D +
Sbjct: 136 QIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF 195
Query: 545 KGDENDAIPVRWMPLESILYNK-----YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
G WM E ++ Y ++DVW+ G+ L E+ P++ L V
Sbjct: 196 IG------TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE-PPHHELNPMRV 248
Query: 600 VKYIKEGN--ILQAPDNTPDALYDLMKLC 626
+ I + L P D +K C
Sbjct: 249 LLKIAKSEPPTLAQPSRWSSNFKDFLKKC 277
>pdb|3KIV|A Chain A, Recombinant Kringle Iv-10/m66 Variant Of Human
Apolipoprotein(a)
Length = 79
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSP 246
C G G+ Y+GT +TTV G CQ W + PH H+R P +P + NYCRN + P
Sbjct: 2 CYHGNGQSYRGTFSTTVTGRTCQSWSSMTPHRHQRTPENYPNDGLTMNYCRNPDADT-GP 60
Query: 247 WCYTMDPNVRWQRCEIPTC 265
WC+T DP++RW+ C + C
Sbjct: 61 WCFTTDPSIRWEYCNLTRC 79
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 45/269 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+ +LG GAFG+V++A+ E L A K++ ++ E L+ D+ E +LA DHPN
Sbjct: 42 IGELGDGAFGKVYKAQ-----NKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPN 95
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLND-FLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
IVKLL + +L E+ G ++ L + P L+
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP--------------------LTES 135
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS----RKMYLQDYY 544
+ + Q + YL D K +HRDL N L +K+ADFG+S R + +D +
Sbjct: 136 QIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXF 195
Query: 545 KGDENDAIPVRWMPLESILYNK-----YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
G WM E ++ Y ++DVW+ G+ L E+ P++ L V
Sbjct: 196 IG------TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE-PPHHELNPMRV 248
Query: 600 VKYIKEGN--ILQAPDNTPDALYDLMKLC 626
+ I + L P D +K C
Sbjct: 249 LLKIAKSEPPTLAQPSRWSSNFKDFLKKC 277
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 31/265 (11%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD---EASEYLQTDFEREACLLAEFDHPN 429
LGQG+FG+VF K + + L A+K+LK + + ++T ER+ +L E +HP
Sbjct: 32 LGQGSFGKVFLVKK--ISGSDARQLYAMKVLKKATLKVRDRVRTKMERD--ILVEVNHPF 87
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKL + L+ +++ GDL F R+ + + D
Sbjct: 88 IVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMF------------------TEED 127
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ ++A + +L ++RDL N L++++ +K+ DFGLS++ D+ K +
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYS 185
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
V +M E + +T +D W+FGV ++E+ + L P+ G +E + I + +
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL-PFQGKDRKETMTMILKAKLG 244
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNR 634
+P+A L+++ + P NR
Sbjct: 245 MPQFLSPEA-QSLLRMLFKRNPANR 268
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 115/289 (39%), Gaps = 42/289 (14%)
Query: 370 VRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD--FEREACLLAEF 425
V+ LG GA+G V + K G + A+K++K + E +L +
Sbjct: 9 VKKLGSGAYGEVLLCKDKLTGAER-------AIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 426 DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQL 485
DHPNI+KL + L+ E G+L D I +
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFD--------------------EIILRQKF 101
Query: 486 STCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MVVKIADFGLSRKMYLQD 542
S D I Q+ SG YL VHRDL N L+ + ++KI DFGLS +
Sbjct: 102 SEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-- 159
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
G + + + +L KY + DVW+ GV L+ I P+ G T +E++K
Sbjct: 160 --GGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILY-ILLCGYPPFGGQTDQEILKR 216
Query: 603 IKEGNI-LQAPD--NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
+++G PD D L+KL +P R S W +K
Sbjct: 217 VEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVK 265
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 31/265 (11%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD---EASEYLQTDFEREACLLAEFDHPN 429
LGQG+FG+VF K + + L A+K+LK + + ++T ER+ +L E +HP
Sbjct: 33 LGQGSFGKVFLVKK--ISGSDARQLYAMKVLKKATLKVRDRVRTKMERD--ILVEVNHPF 88
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKL + L+ +++ GDL F R+ + + D
Sbjct: 89 IVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMF------------------TEED 128
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ ++A + +L ++RDL N L++++ +K+ DFGLS++ D+ K +
Sbjct: 129 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYS 186
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
V +M E + +T +D W+FGV ++E+ + L P+ G +E + I + +
Sbjct: 187 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL-PFQGKDRKETMTMILKAKLG 245
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNR 634
+P+A L+++ + P NR
Sbjct: 246 MPQFLSPEA-QSLLRMLFKRNPANR 269
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 115/282 (40%), Gaps = 43/282 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 19 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY RG++ L+ S + + T
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS-----------------KFDEQRTAT 117
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG------LSRKMYLQDY 543
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG SR+ L
Sbjct: 118 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--- 171
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 172 -------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 223
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 224 SRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 15 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 70
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 110
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 160
Query: 549 NDAIPVR---------WMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 161 --GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 8 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 63
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 103
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 153
Query: 549 NDAIPVR---------WMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 154 --GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 8 VEKIGEGTYGVVYKAR--NKLTGEVVALXKIRL--DTETEGVPSTAIREISLLKELNHPN 63
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 103
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 153
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 154 --GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 7 VEKIGEGTYGVVYKAR--NKLTGEVVALXKIRL--DTETEGVPSTAIREISLLKELNHPN 62
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 102
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 152
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 153 --GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 38/281 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML-KDEASEYLQTDFEREACLLAEFDHP 428
++ +G+G F +V A+ +L E VA+K++ K + + RE ++ +HP
Sbjct: 20 LKTIGKGNFAKVKLARH--ILTGRE---VAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
NIVKL V K + L+ EY G++ D+L +G E+
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL-------VAHGRMKEKEAR---------- 117
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
+ QI S + Y ++ VHRDL N L++ M +KIADFG S ++ G +
Sbjct: 118 ---SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS-----NEFTVGGK 169
Query: 549 NDAI---PVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
DA P P E KY E DVW+ GV L+ + S +L P+ G +E+ + +
Sbjct: 170 LDAFCGAPPYAAP-ELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGQNLKELRERVL 227
Query: 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P +L+K + P+ R + I + W
Sbjct: 228 RGK-YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 267
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 61/298 (20%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK-DEASEYLQTDFEREACLLAEFDHP 428
+ +G+G +G VF+AK E +VA+K ++ D+ E + + RE CLL E H
Sbjct: 7 LEKIGEGTYGTVFKAK-----NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
NIV+L V K + L+FE+ + DL + C NG P++
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSC------NGDLD---------PEI--- 102
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
+ + Q+ G+ + R +HRDL +N LIN +K+A+FGL+R
Sbjct: 103 -VKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF---------- 151
Query: 549 NDAIPVR---------WMPLESILYNK--YTVESDVWAFGVCLWEIFSFALQPYY-GLTH 596
IPVR W +L+ Y+ D+W+ G C++ + A +P + G
Sbjct: 152 --GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG-CIFAELANAGRPLFPGNDV 208
Query: 597 EEVVKYI----------KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
++ +K I + ++ + PD P +Y N+ P + R + Q L
Sbjct: 209 DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNL 266
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 10 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 105
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 155
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 156 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 15 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 70
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 110
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 160
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 161 --GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 11 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 106
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 156
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 157 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 10 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 105
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 155
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 156 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 8 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 63
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 103
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 153
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 154 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT--DFEREACLLAEFDHPNI 430
LG G FG+V + L H+ VAVK+L + L +RE L F HP+I
Sbjct: 19 LGVGTFGKV-KIGEHQLTGHK----VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
+KL V + ++ EY+ G+L D+ IC +G ME+ R+ Q
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDY--ICK-----HGRVEEMEAR--RLFQ------ 118
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK---GD 547
QI S + Y VHRDL N L++ M KIADFGLS M ++ + G
Sbjct: 119 -----QILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGS 173
Query: 548 ENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
N A P E I Y E D+W+ GV L+ + L P+ + K I+ G
Sbjct: 174 PNYAAP------EVISGRLYAGPEVDIWSCGVILYALLCGTL-PFDDEHVPTLFKKIR-G 225
Query: 607 NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL 651
+ P+ ++ L+ + P+ R + + I + W K+DL
Sbjct: 226 GVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEW-FKQDL 269
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 7 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 62
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 102
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 152
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 153 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 125/282 (44%), Gaps = 40/282 (14%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDH 427
++ +G+G F +V A+ +L +E VAVK++ S LQ F RE ++ +H
Sbjct: 19 LKTIGKGNFAKVKLARH--ILTGKE---VAVKIIDKTQLNSSSLQKLF-REVRIMKVLNH 72
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIVKL V K + L+ EY G++ D+L + M+ R
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV----------AHGRMKEKEARAK---- 118
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGD 547
QI S + Y + VHRDL N L++ M +KIADFG S ++ G+
Sbjct: 119 ------FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-----NEFTFGN 167
Query: 548 ENDAI---PVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ DA P P E KY E DVW+ GV L+ + S +L P+ G +E+ + +
Sbjct: 168 KLDAFCGAPPYAAP-ELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGQNLKELRERV 225
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P +L+K + P R + I + W
Sbjct: 226 LRGK-YRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 266
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 7 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 62
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 102
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 152
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 153 --GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 8 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 63
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 103
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 153
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 154 --GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 8 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 63
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 103
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 153
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 154 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 8 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 63
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 103
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 153
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 154 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 7 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 62
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 102
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 152
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 153 --GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT--DFEREACLLAEFDHPNI 430
LG G FG+V + L H+ VAVK+L + L +RE L F HP+I
Sbjct: 19 LGVGTFGKV-KIGEHQLTGHK----VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
+KL V + ++ EY+ G+L D+ IC +G ME+ R+ Q
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDY--ICK-----HGRVEEMEAR--RLFQ------ 118
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK---GD 547
QI S + Y VHRDL N L++ M KIADFGLS M ++ + G
Sbjct: 119 -----QILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGS 173
Query: 548 ENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
N A P E I Y E D+W+ GV L+ + L P+ + K I+ G
Sbjct: 174 PNYAAP------EVISGRLYAGPEVDIWSCGVILYALLCGTL-PFDDEHVPTLFKKIR-G 225
Query: 607 NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL 651
+ P+ ++ L+ + P+ R + + I + W K+DL
Sbjct: 226 GVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEW-FKQDL 269
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 7 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 62
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 102
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 152
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 153 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 8 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 63
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 103
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 153
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 154 --GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 9 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 64
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 104
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 154
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 155 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 11 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKTFMD---------------ASALTGIP----LP 106
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 156
Query: 549 NDAIPVR---------WMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 157 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 12 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 67
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 107
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 157
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 158 --GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 11 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 106
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 156
Query: 549 NDAIPVR---------WMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 157 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 9 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 64
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 104
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 154
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 155 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 9 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 64
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 104
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 154
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 155 --GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 123/279 (44%), Gaps = 34/279 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDH 427
++ +G+G F +V A+ +L +E VAV+++ S LQ F RE ++ +H
Sbjct: 19 LKTIGKGNFAKVKLARH--ILTGKE---VAVRIIDKTQLNSSSLQKLF-REVRIMKVLNH 72
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIVKL V K + L+ EY G++ D+L + M+ R
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV----------AHGRMKEKEARAK---- 118
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGD 547
QI S + Y + VHRDL N L++ M +KIADFG S + + K D
Sbjct: 119 ------FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN--KLD 170
Query: 548 ENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
E P P E KY E DVW+ GV L+ + S +L P+ G +E+ + + G
Sbjct: 171 EFCGSPPYAAP-ELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGQNLKELRERVLRG 228
Query: 607 NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+ P +L+K + P R + I + W
Sbjct: 229 K-YRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 266
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 12 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 67
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 107
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 108 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 157
Query: 549 NDAIPVR---------WMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 158 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 8 VEKIGEGTYGVVYKARNK--LTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 63
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 103
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 104 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 153
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 154 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 10 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 105
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL N LIN + +K+ADFGL+R
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---------- 155
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 156 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 36/224 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK-DEASEYLQTDFEREACLLAE---F 425
V ++G GA+G V++A+ P VA+K ++ E L RE LL F
Sbjct: 9 VAEIGVGAYGTVYKARDP-----HSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 426 DHPNIVKLLGVCAVGK-----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+HPN+V+L+ VCA + + L+FE++ + DL +L P
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP---------------- 106
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
P L + + Q G+ +L VHRDL N L+ VK+ADFGL+R +
Sbjct: 107 --PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR---I 161
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
Y + + + + E +L + Y D+W+ G E+F
Sbjct: 162 YSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 103/239 (43%), Gaps = 34/239 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FEREACLLAEFDHPNIV 431
LG+G+FG V + K + +E+ AVK++ +++ T RE LL + DHPNI+
Sbjct: 30 LGKGSFGEVLKCKDR--ITQQEY---AVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
KL + ++ E G+L D I + + S D
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFD--------------------EIIKRKRFSEHDAA 124
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV---VKIADFGLSRKMYLQDYYKGDE 548
I Q+ SG+ Y+ VHRDL N L+ + +KI DFGLS K
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--- 181
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
D I + +L Y + DVW+ GV L+ + S P+YG +++K ++ G
Sbjct: 182 -DRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVETGK 238
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 103/239 (43%), Gaps = 34/239 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FEREACLLAEFDHPNIV 431
LG+G+FG V + K + +E+ AVK++ +++ T RE LL + DHPNI+
Sbjct: 30 LGKGSFGEVLKCKDR--ITQQEY---AVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
KL + ++ E G+L D I + + S D
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFD--------------------EIIKRKRFSEHDAA 124
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV---VKIADFGLSRKMYLQDYYKGDE 548
I Q+ SG+ Y+ VHRDL N L+ + +KI DFGLS K
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--- 181
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
D I + +L Y + DVW+ GV L+ + S P+YG +++K ++ G
Sbjct: 182 -DRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVETGK 238
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 9 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 64
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 104
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL N LIN + +K+ADFGL+R
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---------- 154
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 155 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAE---F 425
V ++G+GA+G+VF+A+ LK+ VA+K ++ + E + RE +L F
Sbjct: 16 VAEIGEGAYGKVFKARD---LKNGG-RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 426 DHPNIVKLLGVCAVGK-----PMCLLFEYMGRGDLNDFL-RICSPNNYINGTYSSMESSI 479
+HPN+V+L VC V + + L+FE++ + DL +L ++ P
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG-------------- 116
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
VP + D++ Q+ G+ +L + VHRDL +N L+ +K+ADFGL+R
Sbjct: 117 --VPTETIKDMM---FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR--- 168
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
+ + + + + + E +L + Y D+W+ G E+F
Sbjct: 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 8 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 63
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMD---------------ASALTGIP----LP 103
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 104 LIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 153
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 154 --GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 124/281 (44%), Gaps = 38/281 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML-KDEASEYLQTDFEREACLLAEFDHP 428
++ +G+G F +V A+ +L E VA+K++ K + + RE ++ +HP
Sbjct: 17 LKTIGKGNFAKVKLARH--ILTGRE---VAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
NIVKL V K + L+ EY G++ D+L +G E+
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL-------VAHGRMKEKEAR---------- 114
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ---DYYK 545
+ QI S + Y ++ VHRDL N L++ M +KIADFG S + + D +
Sbjct: 115 ---SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC 171
Query: 546 GDENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
G A P E KY E DVW+ GV L+ + S +L P+ G +E+ + +
Sbjct: 172 GSPPYAAP------ELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGQNLKELRERVL 224
Query: 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P +L+K + P+ R + I + W
Sbjct: 225 RGK-YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 264
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 11 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ DL F+ S++ +P
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSM-DLKKFMD---------------ASALTGIP----LP 106
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL N LIN + +K+ADFGL+R
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---------- 156
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 157 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 11 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQ-DLKKFMD---------------ASALTGIP----LP 106
Query: 490 LITIAL-QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI L Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 156
Query: 549 NDAIPVR---------WMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 157 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+G+G+FG VF+ + + +VA+K++ E +E D ++E +L++ D + K
Sbjct: 31 IGKGSFGEVFKG-----IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTK 85
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLIT 492
G G + ++ EY+G G D LR + + + T
Sbjct: 86 YYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEF---------------------QIAT 124
Query: 493 IALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAI 552
+ +I G+ YL K +HRD+ N L+++Q VK+ADFG++ ++ K +
Sbjct: 125 MLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNTFVGT 183
Query: 553 PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAP 612
P WM E I + Y ++D+W+ G+ E+ + P + V+ I + N
Sbjct: 184 PF-WMAPEVIQQSAYDSKADIWSLGITAIEL-AKGEPPNSDMHPMRVLFLIPKNNPPTLV 241
Query: 613 DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648
+ + + + C N P RP+ + + + + +K
Sbjct: 242 GDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVK 277
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 25/274 (9%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
+ +G+G F V++A LL L V++ D + D +E LL + +HPN+
Sbjct: 38 KKIGRGQFSEVYRAAC--LLDGVPVALKKVQIF-DLMDAKARADCIKEIDLLKQLNHPNV 94
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
+K + ++ E GDL+ ++ + +P+ +
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDLSRMIK-------------HFKKQKRLIPERTVWKY 141
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEND 550
+Q+ S + ++ R+ +HRD+ N I VVK+ D GL R + +
Sbjct: 142 F---VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR--FFSSKTTAAHSL 196
Query: 551 AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG--LTHEEVVKYIKEGNI 608
+M E I N Y +SD+W+ G L+E+ + P+YG + + K I++ +
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ-SPFYGDKMNLYSLCKKIEQCDY 255
Query: 609 LQAP-DNTPDALYDLMKLCWNMKPMNRPSFRTIY 641
P D+ + L L+ +C N P RP +Y
Sbjct: 256 PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVY 289
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 39/236 (16%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE 416
L LE N+ + +G G FG+V++ G+L+ + VA+K E+S+ ++ E
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYK----GVLR--DGAKVALKRRTPESSQGIEEF-E 83
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
E L+ HP++V L+G C M L+++YM G+L L Y S
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL------------YGS-- 129
Query: 477 SSIHRVPQLSTC--DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+P +S + I + A G+ YL R +HRD+ + N L+++ V KI DFG+
Sbjct: 130 ----DLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGI 185
Query: 535 SRK------MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
S+K +L KG + ++ E + + T +SDV++FGV L+E+
Sbjct: 186 SKKGTELGQTHLXXVVKG------TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 34/238 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD-FEREACLLAEFDHPNIV 431
LG+G+FG V + K + +E+ AVK++ +++ T RE LL + DHPNI+
Sbjct: 30 LGKGSFGEVLKCKDR--ITQQEY---AVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
KL + ++ E G+L D I + + S D
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFD--------------------EIIKRKRFSEHDAA 124
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV---VKIADFGLSRKMYLQDYYKGDE 548
I Q+ SG+ Y+ VHRDL N L+ + +KI DFGLS K
Sbjct: 125 RIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK--- 181
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
D I + +L Y + DVW+ GV L+ + S P+YG +++K ++ G
Sbjct: 182 -DRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVETG 237
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAE---F 425
V ++G+GA+G+VF+A+ LK+ VA+K ++ + E + RE +L F
Sbjct: 16 VAEIGEGAYGKVFKARD---LKNGG-RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 426 DHPNIVKLLGVCAVGK-----PMCLLFEYMGRGDLNDFL-RICSPNNYINGTYSSMESSI 479
+HPN+V+L VC V + + L+FE++ + DL +L ++ P
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG-------------- 116
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
VP + D++ Q+ G+ +L + VHRDL +N L+ +K+ADFGL+R
Sbjct: 117 --VPTETIKDMM---FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR--- 168
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
+ + + + + + E +L + Y D+W+ G E+F
Sbjct: 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 9 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 64
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ DL F+ S++ +P
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSM-DLKKFMD---------------ASALTGIP----LP 104
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL N LIN + +K+ADFGL+R
Sbjct: 105 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF---------- 154
Query: 549 NDAIPVR---------WMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 155 --GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 115/236 (48%), Gaps = 39/236 (16%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE 416
L LE N+ + +G G FG+V++ G+L+ + VA+K E+S+ ++ FE
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYK----GVLR--DGAKVALKRRTPESSQGIEE-FE 83
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
E L+ HP++V L+G C M L+++YM G+L L Y S
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL------------YGS-- 129
Query: 477 SSIHRVPQLSTC--DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+P +S + I + A G+ YL R +HRD+ + N L+++ V KI DFG+
Sbjct: 130 ----DLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGI 185
Query: 535 SRK------MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
S+K +L KG + ++ E + + T +SDV++FGV L+E+
Sbjct: 186 SKKGTELDQTHLXXVVKG------TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V +G+G +G V++A+ L E L +++ D +E + + RE LL E +HPN
Sbjct: 7 VEKIGEGTYGVVYKAR--NKLTGEVVALKKIRL--DTETEGVPSTAIREISLLKELNHPN 62
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKLL V + L+FE++ + DL F+ S++ +P
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQ-DLKTFMD---------------ASALTGIP----LP 102
Query: 490 LI-TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
LI + Q+ G+ + + +HRDL +N LIN + +K+ADFGL+R
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------- 152
Query: 549 NDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+PVR W IL Y+ D+W+ G E+ +
Sbjct: 153 --GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 36/224 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK-DEASEYLQTDFEREACLLAE---F 425
V ++G GA+G V++A+ P VA+K ++ E L RE LL F
Sbjct: 9 VAEIGVGAYGTVYKARDP-----HSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 426 DHPNIVKLLGVCAVGK-----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+HPN+V+L+ VCA + + L+FE++ + DL +L P
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP---------------- 106
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
P L + + Q G+ +L VHRDL N L+ VK+ADFGL+R +
Sbjct: 107 --PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR---I 161
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
Y + + + E +L + Y D+W+ G E+F
Sbjct: 162 YSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 122/282 (43%), Gaps = 40/282 (14%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDH 427
++ +G+G F +V A+ +L +E VAVK++ S LQ F RE ++ +H
Sbjct: 19 LKTIGKGNFAKVKLARH--ILTGKE---VAVKIIDKTQLNSSSLQKLF-REVRIMKVLNH 72
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIVKL V K + L+ EY G++ D+L + M+ R
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV----------AHGRMKEKEARAK---- 118
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ---DYY 544
QI S + Y + VHRDL N L++ M +KIADFG S + D +
Sbjct: 119 ------FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
Query: 545 KGDENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
G A P E KY E DVW+ GV L+ + S +L P+ G +E+ + +
Sbjct: 173 CGSPPYAAP------ELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGQNLKELRERV 225
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P +L+K + P R + I + W
Sbjct: 226 LRGK-YRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 266
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 37/225 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAE---F 425
V ++G+GA+G+VF+A+ LK+ VA+K ++ + E + RE +L F
Sbjct: 16 VAEIGEGAYGKVFKARD---LKNGG-RFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 426 DHPNIVKLLGVCAVGK-----PMCLLFEYMGRGDLNDFL-RICSPNNYINGTYSSMESSI 479
+HPN+V+L VC V + + L+FE++ + DL +L ++ P
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG-------------- 116
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
VP + D++ Q+ G+ +L + VHRDL +N L+ +K+ADFGL+R
Sbjct: 117 --VPTETIKDMM---FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR--- 168
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
+ + + + + + E +L + Y D+W+ G E+F
Sbjct: 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 126/265 (47%), Gaps = 31/265 (11%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD---EASEYLQTDFEREACLLAEFDHPN 429
LGQG+FG+VF + + + + L A+K+LK + + ++T ER+ +LA+ +HP
Sbjct: 36 LGQGSFGKVFLVRK--VTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD--ILADVNHPF 91
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VKL + L+ +++ GDL F R+ + + D
Sbjct: 92 VVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMF------------------TEED 131
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ ++A G+ +L ++RDL N L++++ +K+ DFGLS++ D+ K +
Sbjct: 132 VKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--DHEKKAYS 189
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
V +M E + ++ +D W++GV ++E+ + +L P+ G +E + I + L
Sbjct: 190 FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSL-PFQGKDRKETMTLILKAK-L 247
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNR 634
P L++ + P NR
Sbjct: 248 GMPQFLSTEAQSLLRALFKRNPANR 272
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 122/282 (43%), Gaps = 40/282 (14%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDH 427
++ +G+G F +V A+ +L +E VAVK++ S LQ F RE ++ +H
Sbjct: 19 LKTIGKGNFAKVKLARH--ILTGKE---VAVKIIDKTQLNSSSLQKLF-REVRIMKVLNH 72
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIVKL V K + L+ EY G++ D+L + M+ R
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV----------AHGRMKEKEARAK---- 118
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ---DYY 544
QI S + Y + VHRDL N L++ M +KIADFG S + D +
Sbjct: 119 ------FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
Query: 545 KGDENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
G A P E KY E DVW+ GV L+ + S +L P+ G +E+ + +
Sbjct: 173 CGSPPYAAP------ELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGQNLKELRERV 225
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P +L+K + P R + I + W
Sbjct: 226 LRGK-YRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 266
>pdb|4KIV|A Chain A, Recombinant Kringle Iv-10W72R MUTANT OF HUMAN
Apolipoprotein(A)
Length = 79
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSP 246
C G G+ Y+GT +TTV G CQ W + PH H+R P +P + NYCRN + P
Sbjct: 2 CYHGNGQSYRGTFSTTVTGRTCQSWSSMTPHRHQRTPENYPNDGLTMNYCRNPDADT-GP 60
Query: 247 WCYTMDPNVRWQRCEIPTC 265
WC+TMDP++R + C + C
Sbjct: 61 WCFTMDPSIRREYCNLTRC 79
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 31/276 (11%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 40 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 138
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S ++ + D
Sbjct: 139 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLC 193
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 194 GTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE-F 249
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 113/278 (40%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 15 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 113
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S +
Sbjct: 114 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 164
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
D + + ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 165 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 223
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 224 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 52/226 (23%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK-DEASEYLQTDFEREACLLAEFDHPNIV 431
+G+G +G V++AK + +VA+K ++ D E + + RE LL E HPNIV
Sbjct: 29 VGEGTYGVVYKAK------DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
L+ V + + L+FE+M + D ++ N G S I
Sbjct: 83 SLIDVIHSERCLTLVFEFMEK----DLKKVLDENK--TGLQDSQ---------------I 121
Query: 492 TIAL-QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEND 550
I L Q+ G+ + + +HRDL +N LIN +K+ADFGL+R
Sbjct: 122 KIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF------------ 169
Query: 551 AIPVR---------WMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
IPVR W +L KY+ D+W+ G E+ +
Sbjct: 170 GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 31/276 (11%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 19 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 117
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S ++ + D
Sbjct: 118 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLC 172
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 173 GTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE-F 228
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 52/229 (22%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK-DEASEYLQTDFEREACLLAEFDHP 428
+ +G+G +G V++AK + +VA+K ++ D E + + RE LL E HP
Sbjct: 26 LEKVGEGTYGVVYKAK------DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
NIV L+ V + + L+FE+M + D ++ N G S
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEK----DLKKVLDENK--TGLQDSQ------------- 120
Query: 489 DLITIAL-QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGD 547
I I L Q+ G+ + + +HRDL +N LIN +K+ADFGL+R
Sbjct: 121 --IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF--------- 169
Query: 548 ENDAIPVR---------WMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
IPVR W +L KY+ D+W+ G E+ +
Sbjct: 170 ---GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 31/276 (11%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 14 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 112
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S ++ + D
Sbjct: 113 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLC 167
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 168 GTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE-F 223
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 31/276 (11%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 15 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 113
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S ++ + D
Sbjct: 114 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLC 168
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 169 GTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE-F 224
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 31/276 (11%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 14 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 112
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S ++ + D
Sbjct: 113 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLC 167
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 168 GTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE-F 223
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 40/282 (14%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDH 427
++ +G+G F +V A+ +L +E VAV+++ S LQ F RE ++ +H
Sbjct: 19 LKTIGKGNFAKVKLARH--ILTGKE---VAVRIIDKTQLNSSSLQKLF-REVRIMKVLNH 72
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIVKL V K + L+ EY G++ D+L + M+ R
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV----------AHGRMKEKEARAK---- 118
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ---DYY 544
QI S + Y + VHRDL N L++ M +KIADFG S + D +
Sbjct: 119 ------FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
Query: 545 KGDENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
G A P E KY E DVW+ GV L+ + S +L P+ G +E+ + +
Sbjct: 173 CGSPPYAAP------ELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGQNLKELRERV 225
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P +L+K + P R + I + W
Sbjct: 226 LRGK-YRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 266
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 36/224 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK-DEASEYLQTDFEREACLLAE---F 425
V ++G GA+G V++A+ P VA+K ++ E L RE LL F
Sbjct: 9 VAEIGVGAYGTVYKARDP-----HSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 426 DHPNIVKLLGVCAVGK-----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+HPN+V+L+ VCA + + L+FE++ + DL +L P
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP---------------- 106
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
P L + + Q G+ +L VHRDL N L+ VK+ADFGL+R +
Sbjct: 107 --PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR---I 161
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
Y + + + E +L + Y D+W+ G E+F
Sbjct: 162 YSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 43/282 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 19 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 117
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG------LSRKMYLQDY 543
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG SR+ L
Sbjct: 118 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--- 171
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 172 -------CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 223
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 224 SRVE-FTFPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 43/282 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 15 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 113
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG------LSRKMYLQDY 543
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG SR+ L
Sbjct: 114 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSG- 169
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 170 ---------TLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 219
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 220 SRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 114/276 (41%), Gaps = 31/276 (11%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 17 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S ++ + D
Sbjct: 116 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLC 170
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 171 GTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE-F 226
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 113/281 (40%), Gaps = 34/281 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
R LG+G+FG V K + +++ + +K + + RE LL + DHPNI
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTD---KESLLREVQLLKQLDHPNI 94
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
+KL L+ E G+L D I S + S D
Sbjct: 95 MKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRF------------------SEVDA 134
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV---VKIADFGLSRKMYLQDYYKGD 547
I Q+ SG+ Y+ K VHRDL N L+ + ++I DFGLS K
Sbjct: 135 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK-- 192
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
D I + +L+ Y + DVW+ GV L+ + S P+ G +++K +++G
Sbjct: 193 --DKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVEKGK 249
Query: 608 -ILQAPD--NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+ P ++ DL++ P R S R W
Sbjct: 250 YTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 290
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 113/278 (40%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 17 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S +
Sbjct: 116 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 166
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
A+ + ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 167 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 225
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 226 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 107/259 (41%), Gaps = 36/259 (13%)
Query: 376 GAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLG 435
G FG+V++A+ E L A K++ ++ E L+ D+ E +LA DHPNIVKLL
Sbjct: 21 GDFGKVYKAQ-----NKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLD 74
Query: 436 VCAVGKPMCLLFEYMGRGDLND-FLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIA 494
+ +L E+ G ++ L + P L+ + +
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERP--------------------LTESQIQVVC 114
Query: 495 LQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPV 554
Q + YL D K +HRDL N L +K+ADFG+S K + D P
Sbjct: 115 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY 174
Query: 555 RWMPLESILYNK-----YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI--KEGN 607
WM E ++ Y ++DVW+ G+ L E+ P++ L V+ I E
Sbjct: 175 -WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE-PPHHELNPMRVLLKIAKSEPP 232
Query: 608 ILQAPDNTPDALYDLMKLC 626
L P D +K C
Sbjct: 233 TLAQPSRWSSNFKDFLKKC 251
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 125/278 (44%), Gaps = 45/278 (16%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+G+G+FG V++ G+ H + +VA+K++ E +E D ++E +L++ D P I +
Sbjct: 27 IGKGSFGEVYK----GIDNHTK-EVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITR 81
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLIT 492
G + ++ EY+G G D L+ + TY + T
Sbjct: 82 YFGSYLKSTKLWIIMEYLGGGSALDLLKPGP----LEETY-----------------IAT 120
Query: 493 IALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAI 552
I +I G+ YL + +HRD+ N L+++Q VK+ADFG++ ++ K +
Sbjct: 121 ILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNXFVGT 179
Query: 553 PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAP 612
P WM E I + Y ++D+W+ G+ E+ +P H V ++ P
Sbjct: 180 PF-WMAPEVIKQSAYDFKADIWSLGITAIELAKG--EPPNSDLHPMRVLFL-------IP 229
Query: 613 DNTPDAL--------YDLMKLCWNMKPMNRPSFRTIYQ 642
N+P L + ++ C N P RP+ + + +
Sbjct: 230 KNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 43/282 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 40 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 138
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG------LSRKMYLQDY 543
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG SR+ L
Sbjct: 139 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--- 192
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 193 -------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 244
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 245 SRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 122/282 (43%), Gaps = 40/282 (14%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDH 427
++ +G+G F +V A+ +L +E VAVK++ S LQ F RE ++ +H
Sbjct: 12 LKTIGKGNFAKVKLARH--ILTGKE---VAVKIIDKTQLNSSSLQKLF-REVRIMKVLNH 65
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIVKL V K + L+ EY G++ D+L +G E+
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-------VAHGWMKEKEARAK------- 111
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ---DYY 544
QI S + Y + VHRDL N L++ M +KIADFG S + D +
Sbjct: 112 ------FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 165
Query: 545 KGDENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
G A P E KY E DVW+ GV L+ + S +L P+ G +E+ + +
Sbjct: 166 CGSPPYAAP------ELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGQNLKELRERV 218
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P +L+K + P R + I + W
Sbjct: 219 LRGK-YRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRW 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 113/278 (40%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 14 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 112
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S +
Sbjct: 113 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 163
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
A+ + ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 222
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 223 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 115/284 (40%), Gaps = 40/284 (14%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE---REACLLAEFDH 427
R LG+G+FG V K + +++ + +K +TD E RE LL + DH
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ------KTDKESLLREVQLLKQLDH 109
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNI+KL L+ E G+L F I S + S
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRF------------------SE 149
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV---VKIADFGLSRKMYLQDYY 544
D I Q+ SG+ Y+ K VHRDL N L+ + ++I DFGLS
Sbjct: 150 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 209
Query: 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
K D I + +L+ Y + DVW+ GV L+ + S P+ G +++K ++
Sbjct: 210 K----DKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVE 264
Query: 605 EGN-ILQAPD--NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+G + P ++ DL++ P R S R W
Sbjct: 265 KGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 308
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 115/284 (40%), Gaps = 40/284 (14%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE---REACLLAEFDH 427
R LG+G+FG V K + +++ + +K +TD E RE LL + DH
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ------KTDKESLLREVQLLKQLDH 108
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNI+KL L+ E G+L F I S + S
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRF------------------SE 148
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV---VKIADFGLSRKMYLQDYY 544
D I Q+ SG+ Y+ K VHRDL N L+ + ++I DFGLS
Sbjct: 149 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 208
Query: 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
K D I + +L+ Y + DVW+ GV L+ + S P+ G +++K ++
Sbjct: 209 K----DKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVE 263
Query: 605 EGN-ILQAPD--NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+G + P ++ DL++ P R S R W
Sbjct: 264 KGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 307
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 34/273 (12%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG+G++G V++A + E +VA+K + E+ LQ + +E ++ + D P++VK
Sbjct: 37 LGEGSYGSVYKA-----IHKETGQIVAIKQVPVESD--LQ-EIIKEISIMQQCDSPHVVK 88
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLIT 492
G + ++ EY G G ++D +R+ R L+ ++ T
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRL-------------------RNKTLTEDEIAT 129
Query: 493 IALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAI 552
I G+ YL + +HRD+ N L+N + K+ADFG++ ++ K +
Sbjct: 130 ILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGT 188
Query: 553 PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN---IL 609
P WM E I Y +D+W+ G+ E+ +P Y H ++ N
Sbjct: 189 PF-WMAPEVIQEIGYNCVADIWSLGITAIEMAEG--KPPYADIHPMRAIFMIPTNPPPTF 245
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
+ P+ D D +K C P R + + Q
Sbjct: 246 RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 33/253 (13%)
Query: 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-- 416
Q++ D I + LG+G+FG+VF A+ K +F A+K LK + + D E
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAE---FKKTNQF--FAIKALKKDVV-LMDDDVECT 64
Query: 417 --REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSS 474
+ L ++HP + + + + + EY+ GDL ++ C + T+
Sbjct: 65 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-- 122
Query: 475 MESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
A +I G+ +L + V+RDL N L++ +KIADFG+
Sbjct: 123 ------------------YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM 164
Query: 535 SRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594
++ L D K + P P E +L KY D W+FGV L+E+ P++G
Sbjct: 165 CKENMLGD-AKTNXFCGTPDYIAP-EILLGQKYNHSVDWWSFGVLLYEML-IGQSPFHGQ 221
Query: 595 THEEVVKYIKEGN 607
EE+ I+ N
Sbjct: 222 DEEELFHSIRMDN 234
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 43/282 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 31 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 87 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 129
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG------LSRKMYLQDY 543
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG SR+ L
Sbjct: 130 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--- 183
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 184 -------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 235
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 236 SRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 114/276 (41%), Gaps = 31/276 (11%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 14 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 112
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S ++ + +
Sbjct: 113 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELC 167
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 168 GTLD--YLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE-F 223
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 117/280 (41%), Gaps = 34/280 (12%)
Query: 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+LG G F V + + G K + + L + + ERE +L E HPNI+
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
L + + L+ E + G+L DFL + ES L+ +
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFDFL-------------AEKES-------LTEDEAT 111
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYKGD 547
QI G+ YL ++ H DL N ++ D+ V +K+ DFG++ K+ + +K
Sbjct: 112 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK-- 169
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + I N
Sbjct: 170 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGETKQETLTNISAVN 227
Query: 608 I---LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
+ NT + D ++ P R TI Q+L
Sbjct: 228 YDFDEEYFSNTSELAKDFIRRLLVKDPKRR---MTIAQSL 264
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 111/276 (40%), Gaps = 31/276 (11%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 14 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 112
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S +
Sbjct: 113 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTT 165
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE-F 223
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2KNF|A Chain A, Solution Structure And Functional Characterization Of
Human Plasminogen Kringle 5
Length = 86
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHE-RPPPVFPELNNSENYCRNAGGEEP 244
DC+ G G+ Y+G TTV G CQ W A+EPH H P P +NYCRN G+
Sbjct: 4 DCMFGNGKGYRGKRVTTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVG 63
Query: 245 SPWCYTMDPNVRWQRCEIPTCA 266
PWCYT +P + C++P CA
Sbjct: 64 GPWCYTTNPRKLYDYCDVPQCA 85
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 31/286 (10%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREA 419
+F +D VR LG+G FG V+ A+ K +F + + K + E ++ RE
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLARE----KQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 420 CLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+ + HPNI+++ K + L+ E+ RG+L L+ +G + S+
Sbjct: 66 EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-------HGRFDEQRSA- 117
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
T ++A + Y +RK +HRD+ N L+ + +KIADFG S ++
Sbjct: 118 ------------TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS--VH 163
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
+ + ++P E I + + D+W GV +E F + P+ +H E
Sbjct: 164 APSLRRRXMCGTLD--YLPPEMIEGKTHDEKVDLWCAGVLCYE-FLVGMPPFDSPSHTET 220
Query: 600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+ I + L+ P D DL+ P R + + + W
Sbjct: 221 HRRIVNVD-LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 43/282 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 16 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 114
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG------LSRKMYLQDY 543
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG SR+ L
Sbjct: 115 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--- 168
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 169 -------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 220
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 221 SRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 115/284 (40%), Gaps = 40/284 (14%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE---REACLLAEFDH 427
R LG+G+FG V K + +++ + +K +TD E RE LL + DH
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ------KTDKESLLREVQLLKQLDH 85
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNI+KL L+ E G+L F I S + S
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRF------------------SE 125
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV---VKIADFGLSRKMYLQDYY 544
D I Q+ SG+ Y+ K VHRDL N L+ + ++I DFGLS
Sbjct: 126 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185
Query: 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
K D I + +L+ Y + DVW+ GV L+ + S P+ G +++K ++
Sbjct: 186 K----DKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVE 240
Query: 605 EGN-ILQAPD--NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+G + P ++ DL++ P R S R W
Sbjct: 241 KGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 114/278 (41%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K+ +F L + K + + ++ RE + + HPN
Sbjct: 14 RPLGKGKFGNVYLARE----KNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 112
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y +K +HRD+ N L+ +KIADFG S +
Sbjct: 113 YIT---ELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 163
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
A+ + ++P E I + + D+W+ GV +E F P+ T+++ K I
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQDTYKRISRVE 222
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 223 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 122/282 (43%), Gaps = 40/282 (14%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDH 427
++ +G+G F +V A+ +L +E VAVK++ S LQ F RE + +H
Sbjct: 19 LKTIGKGNFAKVKLARH--ILTGKE---VAVKIIDKTQLNSSSLQKLF-REVRIXKVLNH 72
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIVKL V K + L+ EY G++ D+L +G E+
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYL-------VAHGRXKEKEARAK------- 118
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGD 547
QI S + Y + VHRDL N L++ +KIADFG S + G+
Sbjct: 119 ------FRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTF-----GN 167
Query: 548 ENDAI---PVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ DA P P E KY E DVW+ GV L+ + S +L P+ G +E+ + +
Sbjct: 168 KLDAFCGAPPYAAP-ELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGQNLKELRERV 225
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
G + P +L+K + P R + I + W
Sbjct: 226 LRGK-YRIPFYXSTDCENLLKKFLILNPSKRGTLEQIXKDRW 266
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 17 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S +
Sbjct: 116 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 166
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
+ + ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 225
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 226 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 43/282 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 19 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 117
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG------LSRKMYLQDY 543
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG SR+ L
Sbjct: 118 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL--- 171
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 172 -------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 223
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 224 SRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 33/253 (13%)
Query: 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-- 416
Q++ D + LG+G+FG+VF A+ K +F A+K LK + + D E
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAE---FKKTNQF--FAIKALKKDVV-LMDDDVECT 65
Query: 417 --REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSS 474
+ L ++HP + + + + + EY+ GDL ++ C + T+
Sbjct: 66 MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF-- 123
Query: 475 MESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
A +I G+ +L + V+RDL N L++ +KIADFG+
Sbjct: 124 ------------------YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM 165
Query: 535 SRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594
++ L D K +E P P E +L KY D W+FGV L+E+ P++G
Sbjct: 166 CKENMLGD-AKTNEFCGTPDYIAP-EILLGQKYNHSVDWWSFGVLLYEML-IGQSPFHGQ 222
Query: 595 THEEVVKYIKEGN 607
EE+ I+ N
Sbjct: 223 DEEELFHSIRMDN 235
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 113/284 (39%), Gaps = 40/284 (14%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE---REACLLAEFDH 427
R LG+G+FG V K + +++ + +K +TD E RE LL + DH
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ------KTDKESLLREVQLLKQLDH 85
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNI KL L+ E G+L F I S + S
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRF------------------SE 125
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV---VKIADFGLSRKMYLQDYY 544
D I Q+ SG+ Y K VHRDL N L+ + ++I DFGLS
Sbjct: 126 VDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX 185
Query: 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
K D I + +L+ Y + DVW+ GV L+ + S P+ G +++K ++
Sbjct: 186 K----DKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVE 240
Query: 605 EGN-ILQAPD--NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+G + P ++ DL++ P R S R W
Sbjct: 241 KGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEW 284
>pdb|5HPG|A Chain A, Structure And Ligand Determinants Of The Recombinant
Kringle 5 Domain Of Human Plasminogen
pdb|5HPG|B Chain B, Structure And Ligand Determinants Of The Recombinant
Kringle 5 Domain Of Human Plasminogen
Length = 84
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHE-RPPPVFPELNNSENYCRNAGGEEP 244
DC+ G G+ Y+G TTV G CQ W A+EPH H P P +NYCRN G+
Sbjct: 1 DCMFGNGKGYRGKRVTTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVG 60
Query: 245 SPWCYTMDPNVRWQRCEIPTCA 266
PWCYT +P + C++P CA
Sbjct: 61 GPWCYTTNPRKLYDYCDVPQCA 82
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 43/282 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 14 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 112
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL------SRKMYLQDY 543
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG SR+ L
Sbjct: 113 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL--- 166
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 167 -------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 218
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 219 SRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 13 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 111
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S +
Sbjct: 112 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 162
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
+ + ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 163 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 221
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 222 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 43/282 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 14 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 112
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL------SRKMYLQDY 543
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG SR+ L
Sbjct: 113 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--- 166
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 167 -------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 218
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 219 SRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 48/302 (15%)
Query: 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLV-AVKMLKDEASEYLQTDFEREA 419
E +D + +LG G G VF+ + H+ LV A K++ E ++ RE
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIREL 58
Query: 420 CLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+L E + P IV G + + E+M G L+ L+
Sbjct: 59 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG---------------- 102
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
R+P+ L +++ + G+ YL ++ K +HRD+ N L+N + +K+ DFG+S ++
Sbjct: 103 -RIPEQI---LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 158
Query: 539 YLQDYYKGDE--NDAIPVR-WMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
DE N+ + R +M E + Y+V+SD+W+ G+ L E+ + P +
Sbjct: 159 I-------DEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM-AVGRYPRPPMA 210
Query: 596 HEEVVKYIKEGNILQAPDNTPDALY-----DLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
E++ YI + + P P A++ D + C P R + + + + D
Sbjct: 211 IFELLDYI----VNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 266
Query: 651 LE 652
E
Sbjct: 267 AE 268
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 18 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 116
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S +
Sbjct: 117 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 167
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
+ + ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 226
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 227 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 39/227 (17%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK----DEASEYLQTDFEREACLLAE- 424
V ++G GA+G V++A+ P VA+K ++ L RE LL
Sbjct: 14 VAEIGVGAYGTVYKARDP-----HSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 425 --FDHPNIVKLLGVCAVGKP-----MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMES 477
F+HPN+V+L+ VCA + + L+FE++ + DL +L P
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPP------------- 114
Query: 478 SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537
P L + + Q G+ +L VHRDL N L+ VK+ADFGL+R
Sbjct: 115 -----PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLAR- 168
Query: 538 MYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
+ Y + + + E +L + Y D+W+ G E+F
Sbjct: 169 --IYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 11 RPLGKGKFGNVYLARE----KQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 109
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S +
Sbjct: 110 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 160
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
+ + ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 161 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 219
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 220 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 43/282 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 17 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL------SRKMYLQDY 543
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG SR+ L
Sbjct: 116 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--- 169
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 170 -------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRI 221
Query: 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 222 SRVE-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1CEA|A Chain A, The Structure Of The Non-Covalent Complex Of Recombinant
Kringle 1 Domain Of Human Plasminogen With Eaca
(Epsilon- Aminocaproic Acid)
pdb|1CEA|B Chain B, The Structure Of The Non-Covalent Complex Of Recombinant
Kringle 1 Domain Of Human Plasminogen With Eaca
(Epsilon- Aminocaproic Acid)
pdb|1CEB|A Chain A, The Structure Of The Non-Covalent Complex Of Recombinant
Kringle 1 Domain Of Human Plasminogen With Amcha
(Trans-4- Aminomethylcyclohexane-1-Carboxylic Acid)
pdb|1CEB|B Chain B, The Structure Of The Non-Covalent Complex Of Recombinant
Kringle 1 Domain Of Human Plasminogen With Amcha
(Trans-4- Aminomethylcyclohexane-1-Carboxylic Acid)
Length = 88
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+C G G+ Y+GT++ T G+ CQ+W + PH P P ENYCRN +
Sbjct: 3 ECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQG 62
Query: 246 PWCYTMDPNVRWQRCEIPTCAD 267
PWCYT DP R+ C+I C +
Sbjct: 63 PWCYTTDPEKRYDYCDILECEE 84
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
N + NT D ++ P R + + Q W +D +
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGVFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
N + NT D ++ P R + + Q W +D +
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
N + NT D ++ P R + + Q W +D +
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 17 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S +
Sbjct: 116 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRR 166
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
+ + ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 225
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 226 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 28/240 (11%)
Query: 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+LG G F V + + G K + + L + + ERE +L E HPNI+
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
L + + L+ E + G+L DFL + ES L+ +
Sbjct: 93 TLHDIFENKTDVVLILELVSGGELFDFL-------------AEKES-------LTEDEAT 132
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYKGD 547
QI G+ YL ++ H DL N ++ D+ V +K+ DFG++ K+ + +K
Sbjct: 133 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK-- 190
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + I N
Sbjct: 191 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGETKQETLTNISAVN 248
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 28/240 (11%)
Query: 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+LG G F V + + G K + + L + + ERE +L E HPNI+
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
L + + L+ E + G+L DFL + ES L+ +
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFL-------------AEKES-------LTEDEAT 118
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYKGD 547
QI G+ YL ++ H DL N ++ D+ V +K+ DFG++ K+ + +K
Sbjct: 119 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK-- 176
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + I N
Sbjct: 177 -NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGETKQETLTNISAVN 234
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 114
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 115 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 175 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 230
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
N + NT D ++ P R + + Q W +D +
Sbjct: 231 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 280
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 35/291 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN 653
N + NT D ++ P R + + Q W +D +
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 75 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 114
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 115 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 175 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 230
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
N + NT D ++ P R + + Q W +D +
Sbjct: 231 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 280
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
N + NT D ++ P R + + Q W +D +
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 42/222 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK----DEASEYLQTDFEREACLLAEFDHP 428
LG+G F V++A+ +VA+K +K EA + + RE LL E HP
Sbjct: 18 LGEGQFATVYKAR-----DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 72
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
NI+ LL + L+F++M D I N+ + L+
Sbjct: 73 NIIGLLDAFGHKSNISLVFDFME----TDLEVIIKDNSLV----------------LTPS 112
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
+ L G+ YL +HRDL N L+++ V+K+ADFGL++ G
Sbjct: 113 HIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF-------GSP 165
Query: 549 NDA----IPVRWMPLESILYNK--YTVESDVWAFGVCLWEIF 584
N A + RW +L+ Y V D+WA G L E+
Sbjct: 166 NRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 35/283 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
N + NT D ++ P R + + Q W
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 35/283 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
N + NT D ++ P R + + Q W
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1PKR|A Chain A, The Structure Of Recombinant Plasminogen Kringle 1 And The
Fibrin Binding Site
Length = 82
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
+C G G+ Y+GT++ T G+ CQ+W + PH P P ENYCRN +
Sbjct: 2 ECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQG 61
Query: 246 PWCYTMDPNVRWQRCEIPTC 265
PWCYT DP R+ C+I C
Sbjct: 62 PWCYTTDPEKRYDYCDILEC 81
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
N + NT D ++ P R + + Q W +D +
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 35/283 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
N + NT D ++ P R + + Q W
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 117/283 (41%), Gaps = 35/283 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
P P E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 N--IFGTPAFVAP-EIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
N + NT D ++ P R + + Q W
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 118/283 (41%), Gaps = 35/283 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILILELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
N + NT D ++ P R + + Q W
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 112/278 (40%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 16 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 114
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIA+FG S +
Sbjct: 115 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS------VHAPSSRR 165
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
+ + ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 166 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 224
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 225 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 113/279 (40%), Gaps = 40/279 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG+G+FG+V A + ++ ++LK + ERE L HP+I+K
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSD---MHMRVEREISYLKLLRHPHIIK 73
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLIT 492
L V + ++ EY G G+L D YI E R Q
Sbjct: 74 LYDVITTPTDIVMVIEYAG-GELFD---------YIVEKKRMTEDEGRRFFQ-------- 115
Query: 493 IALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK---GDEN 549
QI + Y K VHRDL N L++D + VKIADFGLS M ++ K G N
Sbjct: 116 ---QIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN 172
Query: 550 DAIPVRWMPLESILYNKYT-VESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN- 607
A P E I Y E DVW+ G+ L+ + L P+ E + K+ N
Sbjct: 173 YAAP------EVINGKLYAGPEVDVWSCGIVLYVMLVGRL-PF---DDEFIPNLFKKVNS 222
Query: 608 -ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+ PD L++ PM R + + I + W
Sbjct: 223 CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261
>pdb|2PF1|A Chain A, Structure Of Bovine Prothrombin Fragment 1 Refined At 2.25
Angstroms Resolution
pdb|2PF2|A Chain A, The Ca+2 Ion And Membrane Binding Structure Of The Gla
Domain Of Ca- Prothrombin Fragment 1
Length = 156
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 170 CSHAQLTEMKTDE-ITYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPE 228
C A+ K +E + +C G G Y+G V+ T G+ CQ W ++ PH E P
Sbjct: 48 CESARNPREKLNECLEGNCAEGVGMNYRGNVSVTRSGIECQLWRSRYPHKPEINSTTHPG 107
Query: 229 LNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPTCADSMQDDV 273
+ EN+CRN G PWCYT P +R + C +P C QD V
Sbjct: 108 ADLRENFCRNPDGSITGPWCYTTSPTLRREECSVPVCG---QDRV 149
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 112/278 (40%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ K +F L + K + + ++ RE + + HPN
Sbjct: 17 RPLGKGKFGNVYLARE----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S + + T
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------KFDEQRTAT 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIA+FG S +
Sbjct: 116 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS------VHAPSSRR 166
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
+ + ++P E I + + D+W+ GV +E F P+ T++E K I
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVE 225
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ P RP R + + W
Sbjct: 226 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 24/274 (8%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+G G++GR + + K + LV ++ +E + E LL E HPNIV+
Sbjct: 14 IGTGSYGRCQKIRR----KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 433 LLG--VCAVGKPMCLLFEYMGRGDLNDFL-RICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+ + ++ EY GDL + + Y++ E + RV T
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD------EEFVLRVMTQLTLA 123
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM-YLQDYYKGDE 548
L + G L HRDL N ++ + VK+ DFGL+R + + +D+ K E
Sbjct: 124 LKECHRRSDGGHTVL------HRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK--E 175
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P +M E + Y +SD+W+ G L+E+ + + P+ + +E+ I+EG
Sbjct: 176 FVGTPY-YMSPEQMNRMSYNEKSDIWSLGCLLYELCAL-MPPFTAFSQKELAGKIREGKF 233
Query: 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
+ P D L +++ N+K +RPS I +
Sbjct: 234 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|1HPJ|A Chain A, Solution Nmr Structure Of The Human Plasminogen Kringle 1
Domain Complexed With 6-Aminohexanoic Acid At Ph 5.3,
310k, Derived From Randomly Generated Structures Using
Simulated Annealing, 12 Structures
pdb|1HPK|A Chain A, Solution Nmr Structure Of The Human Plasminogen Kringle 1
Domain Complexed With 6-Aminohexanoic Acid At Ph 5.3,
310k, Derived From Randomly Generated Structures Using
Simulated Annealing, Minimized Average Structure
Length = 79
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSP 246
C G G+ Y+GT++ T G+ CQ+W + PH P P ENYCRN + P
Sbjct: 1 CKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQGP 60
Query: 247 WCYTMDPNVRWQRCEIPTC 265
WCYT DP R+ C+I C
Sbjct: 61 WCYTTDPEKRYDYCDILEC 79
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG G F V + K+ GL +F + + K + D ERE +L E HPN
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKF--IKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
++ L V + L+ E + G+L DFL + ES L+ +
Sbjct: 76 VITLHEVYENKTDVILIGELVAGGELFDFL-------------AEKES-------LTEEE 115
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDYYK 545
QI +G+ YL + H DL N ++ D+ V +KI DFGL+ K+ + +K
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
N ++ E + Y +E+D+W+ GV + + S A P+ G T +E + +
Sbjct: 176 ---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANVSA 231
Query: 606 GNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
N + NT D ++ P R + + Q W +D +
Sbjct: 232 VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQ 281
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 31/291 (10%)
Query: 356 KLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTD 414
++ + +F +D R LG+G FG V+ A+ K +F + + K + E ++
Sbjct: 6 EMPKRKFTIDDFDIGRPLGKGKFGNVYLARE----KQNKFIMALKVLFKSQLEKEGVEHQ 61
Query: 415 FEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSS 474
RE + + HPNI+++ K + L+ E+ RG+L L+ +G +
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-------HGRFDE 114
Query: 475 MESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
S+ T ++A + Y +RK +HRD+ N L+ + +KIADFG
Sbjct: 115 QRSA-------------TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW 161
Query: 535 SRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594
S ++ + + ++P E I + + D+W GV +E F + P+
Sbjct: 162 S--VHAPSLRRRXMCGTLD--YLPPEMIEGKTHDEKVDLWCAGVLCYE-FLVGMPPFDSP 216
Query: 595 THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+H E + I + L+ P D DL+ P R + + + W
Sbjct: 217 SHTETHRRIVNVD-LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 266
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 110/249 (44%), Gaps = 35/249 (14%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER----EAC 420
D ++ LG+G+FG+V A G EE L A+K+LK + +Q D E
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGT---EE--LYAIKILKKDV--VIQDDDVECTMVEKR 71
Query: 421 LLAEFDHPNIVKLLGVC-AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+LA D P + L C + + EY+ GDL I
Sbjct: 72 VLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLM--------------------YHI 111
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
+V + + A +I+ G+ +L R ++RDL N +++ + +KIADFG+ ++ +
Sbjct: 112 QQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-H 170
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
+ D E P P E I Y Y D WA+GV L+E+ + P+ G +E+
Sbjct: 171 MMDGVTTREFCGTPDYIAP-EIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDEL 228
Query: 600 VKYIKEGNI 608
+ I E N+
Sbjct: 229 FQSIMEHNV 237
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 31/291 (10%)
Query: 356 KLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTD 414
++ + +F +D R LG+G FG V+ A+ K +F + + K + E ++
Sbjct: 5 EMPKRKFTIDDFDIGRPLGKGKFGNVYLARE----KQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 415 FEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSS 474
RE + + HPNI+++ K + L+ E+ RG+L L+ +G +
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-------HGRFDE 113
Query: 475 MESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
S+ T ++A + Y +RK +HRD+ N L+ + +KIADFG
Sbjct: 114 QRSA-------------TFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGW 160
Query: 535 SRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594
S ++ + + ++P E I + + D+W GV +E F + P+
Sbjct: 161 S--VHAPSLRRRXMCGTLD--YLPPEMIEGKTHDEKVDLWCAGVLCYE-FLVGMPPFDSP 215
Query: 595 THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+H E + I + L+ P D DL+ P R + + + W
Sbjct: 216 SHTETHRRIVNVD-LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 107/241 (44%), Gaps = 37/241 (15%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML-KDEASEYLQTDFEREACLLAEFDHPN 429
+ +G+G F +V A+ +L E VAVK++ K + + RE ++ +HPN
Sbjct: 21 KTIGKGNFAKVKLARH--VLTGRE---VAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IVKL V K + L+ EY G++ D+L + M+ R
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLV----------AHGRMKEKEARAK------ 119
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ---DYYKG 546
QI S + Y + VHRDL N L++ M +KIADFG S + + D + G
Sbjct: 120 ----FRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCG 175
Query: 547 DENDAIPVRWMPLESILYNKYTV-ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
A P E KY E DVW+ GV L+ + S +L P+ G +E+ + +
Sbjct: 176 SPPYAAP------ELFQGKKYDGPEVDVWSLGVILYTLVSGSL-PFDGQNLKELRERVLR 228
Query: 606 G 606
G
Sbjct: 229 G 229
>pdb|1NL1|A Chain A, Bovine Prothrombin Fragment 1 In Complex With Calcium Ion
Length = 147
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 170 CSHAQLTEMKTDE-ITYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPE 228
C A+ K +E + +C G G Y+G V+ T G+ CQ W ++ PH E P
Sbjct: 48 CESARNPREKLNECLEGNCAEGVGMNYRGNVSVTRSGIECQLWRSRYPHKPEINSTTHPG 107
Query: 229 LNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPTCA 266
+ EN+CRN G PWCYT P +R + C +P C
Sbjct: 108 ADLRENFCRNPDGSITGPWCYTTSPTLRREECSVPVCG 145
>pdb|2SPT|A Chain A, Differences In The Metal Ion Structure Between Sr-And
Ca-Prothrombin Fragment 1
Length = 145
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 170 CSHAQLTEMKTDE-ITYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPE 228
C A+ K +E + +C G G Y+G V+ T G+ CQ W ++ PH E P
Sbjct: 48 CESARNPREKLNECLEGNCAEGVGMNYRGNVSVTRSGIECQLWRSRYPHKPEINSTTHPG 107
Query: 229 LNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPTCA 266
+ EN+CRN G PWCYT P +R + C +P C
Sbjct: 108 ADLRENFCRNPDGSITGPWCYTTSPTLRREECSVPVCG 145
>pdb|1NL2|A Chain A, Bovine Prothrombin Fragment 1 In Complex With Calcium And
Lysophosphotidylserine
Length = 146
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 170 CSHAQLTEMKTDE-ITYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPE 228
C A+ K +E + +C G G Y+G V+ T G+ CQ W ++ PH E P
Sbjct: 48 CESARNPREKLNECLEGNCAEGVGMNYRGNVSVTRSGIECQLWRSRYPHKPEINSTTHPG 107
Query: 229 LNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPTCA 266
+ EN+CRN G PWCYT P +R + C +P C
Sbjct: 108 ADLRENFCRNPDGSITGPWCYTTSPTLRREECSVPVCG 145
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 36/238 (15%)
Query: 350 DARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLV-AVKMLKDEAS 408
+A L K + E +D + +LG G G VF+ + H+ LV A K++ E
Sbjct: 53 EAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIK 106
Query: 409 EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYI 468
++ RE +L E + P IV G + + E+M G L+ L+
Sbjct: 107 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----- 161
Query: 469 NGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVV 527
R+P+ L +++ + G+ YL ++ K +HRD+ N L+N + +
Sbjct: 162 ------------RIPEQI---LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI 206
Query: 528 KIADFGLSRKMY--LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
K+ DFG+S ++ + + + G + +M E + Y+V+SD+W+ G+ L E+
Sbjct: 207 KLCDFGVSGQLIDSMANSFVGTRS------YMSPERLQGTHYSVQSDIWSMGLSLVEM 258
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 30/238 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+ LG G + V++ L VA+K +K ++ E + RE L+ E H N
Sbjct: 10 LEKLGNGTYATVYKG-----LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN 64
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+L V + L+FE+M DL ++ ++ P+ +
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMD-NDLKKYMD---------------SRTVGNTPRGLELN 108
Query: 490 LIT-IALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
L+ Q+ G+ + + K +HRDL +N LIN + +K+ DFGL+R + E
Sbjct: 109 LVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE 168
Query: 549 NDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFSFALQPYY-GLTHEEVVKYI 603
+ W +L Y+ D+W+ G L E+ + +P + G EE +K I
Sbjct: 169 ---VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG--KPLFPGTNDEEQLKLI 221
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLV-AVKMLKDEASEYLQTDFERE 418
+E +D + +LG G G VF+ + H+ LV A K++ E ++ RE
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L E + P IV G + + E+M G L+ L+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------------- 99
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVVKIADFGLSRK 537
R+P+ L +++ + G+ YL ++ K +HRD+ N L+N + +K+ DFG+S +
Sbjct: 100 --RIPEQI---LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 538 MY--LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
+ + + + G + +M E + Y+V+SD+W+ G+ L E+
Sbjct: 155 LIDSMANSFVGTRS------YMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 33/217 (15%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVK-MLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G+G++G VF+ + + +VA+K L+ E ++ RE +L + HPN+V
Sbjct: 11 IGEGSYGVVFKCR-----NRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLV 65
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
LL V + + L+FEY L++ R Y G + SI
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDHTVLHELDR------YQRGVPEHLVKSI------------ 107
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY-LQDYYKGDEND 550
Q + + +HRD+ N LI V+K+ DFG +R + DYY +D
Sbjct: 108 --TWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY----DD 161
Query: 551 AIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
+ RW +L +Y DVWA G E+ S
Sbjct: 162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLV-AVKMLKDEASEYLQTDFERE 418
+E +D + +LG G G VF+ + H+ LV A K++ E ++ RE
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L E + P IV G + + E+M G L+ L+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------------- 99
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVVKIADFGLSRK 537
R+P+ L +++ + G+ YL ++ K +HRD+ N L+N + +K+ DFG+S +
Sbjct: 100 --RIPEQI---LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 538 MY--LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
+ + + + G + +M E + Y+V+SD+W+ G+ L E+
Sbjct: 155 LIDSMANSFVGTRS------YMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 109/268 (40%), Gaps = 51/268 (19%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVK-MLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G+G++G V + + + +VA+K L+ + + ++ RE LL + H N+V
Sbjct: 33 VGEGSYGMVMKCR-----NKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLV 87
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
LL VC K L+FE++ L+D PN Y ++ +
Sbjct: 88 NLLEVCKKKKRWYLVFEFVDHTILDDLELF--PNGL---DYQVVQKYL------------ 130
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDA 551
QI +G+ + +HRD+ N L++ VVK+ DFG +R + DE
Sbjct: 131 ---FQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--- 184
Query: 552 IPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
+ RW +L KY DVWA G + E+F G L
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM--------------------GEPL 224
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSF 637
D+ D LY +M N+ P ++ F
Sbjct: 225 FPGDSDIDQLYHIMMCLGNLIPRHQELF 252
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLV-AVKMLKDEASEYLQTDFERE 418
+E +D + +LG G G VF+ + H+ LV A K++ E ++ RE
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L E + P IV G + + E+M G L+ L+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------------- 99
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVVKIADFGLSRK 537
R+P+ L +++ + G+ YL ++ K +HRD+ N L+N + +K+ DFG+S +
Sbjct: 100 --RIPEQI---LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 538 MY--LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
+ + + + G + +M E + Y+V+SD+W+ G+ L E+
Sbjct: 155 LIDSMANSFVGTRS------YMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 36/238 (15%)
Query: 350 DARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLV-AVKMLKDEAS 408
+A L K + E +D + +LG G G VF+ + H+ LV A K++ E
Sbjct: 18 EAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIK 71
Query: 409 EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYI 468
++ RE +L E + P IV G + + E+M G L+ L+
Sbjct: 72 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----- 126
Query: 469 NGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVV 527
R+P+ L +++ + G+ YL ++ K +HRD+ N L+N + +
Sbjct: 127 ------------RIPEQI---LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI 171
Query: 528 KIADFGLSRKMY--LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
K+ DFG+S ++ + + + G + +M E + Y+V+SD+W+ G+ L E+
Sbjct: 172 KLCDFGVSGQLIDSMANSFVGTRS------YMSPERLQGTHYSVQSDIWSMGLSLVEM 223
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 112/278 (40%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ + +F L + K + + ++ RE + + HPN
Sbjct: 18 RPLGKGKFGNVYLARE----RQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S R + T
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------RFDEQRTAT 116
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S +
Sbjct: 117 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS------VHAPSSRR 167
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
D + + ++P E I + + D+W+ GV +E F + P+ T++E + I
Sbjct: 168 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRRISRVE 226
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ R + + + W
Sbjct: 227 -FTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 121/294 (41%), Gaps = 33/294 (11%)
Query: 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML--KDEASEYL 411
P + F +D R LG+G FG V+ A+ K F +VA+K+L E +
Sbjct: 12 TPDILTRHFTIDDFEIGRPLGKGKFGNVYLARE----KKSHF-IVALKVLFKSQIEKEGV 66
Query: 412 QTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
+ RE + A HPNI++L + + L+ EY RG+L
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL---------------- 110
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
Y ++ S Q + TI ++A ++Y +K +HRD+ N L+ + +KIAD
Sbjct: 111 YKELQKSCTFDEQRTA----TIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIAD 166
Query: 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
FG S + + + ++P E I + + D+W GV +E+ P+
Sbjct: 167 FGWS----VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELL-VGNPPF 221
Query: 592 YGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+H E + I + + L+ P + P DL+ P R + W
Sbjct: 222 ESASHNETYRRIVKVD-LKFPASVPTGAQDLISKLLRHNPSERLPLAQVSAHPW 274
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 123/299 (41%), Gaps = 37/299 (12%)
Query: 354 NPKLEQLEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
P+ +Q E R DI RD LG GAF V A+ K LVA+K + EA E +
Sbjct: 7 GPRWKQAEDIR-DIYDFRDVLGTGAFSEVILAEDKRTQK-----LVAIKCIAKEALEGKE 60
Query: 413 TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
E E +L + HPNIV L + G + L+ + + G+L F RI G Y
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVE-----KGFY 113
Query: 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL---INDQMVVKI 529
+ ++S + Q+ + YL D VHRDL N L +++ + I
Sbjct: 114 TERDAS-------------RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589
+DFGLS+ ++D ++ E + Y+ D W+ GV + I
Sbjct: 161 SDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYP 216
Query: 590 PYYGLTHEEVVKYIKEGNI-LQAP--DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
P+Y ++ + I + +P D+ D+ D ++ P R + Q W
Sbjct: 217 PFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 129/308 (41%), Gaps = 51/308 (16%)
Query: 347 HQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE 406
H D R +++E +G G FG+VF+AK + + + + VK ++
Sbjct: 3 HTVDKRFGMDFKEIEL----------IGSGGFGQVFKAKHR--IDGKTYVIKRVKYNNEK 50
Query: 407 ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNN 466
A ERE LA+ DH NIV G C G F+Y + R +
Sbjct: 51 A--------EREVKALAKLDHVNIVHYNG-CWDG------FDYDPETSSKNSSRSKTKCL 95
Query: 467 YINGTY---SSMESSI--HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521
+I + ++E I R +L + + QI G+ Y+ +K ++RDL N +
Sbjct: 96 FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL 155
Query: 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLW 581
D VKI DFGL L++ K + +R+M E I Y E D++A G+ L
Sbjct: 156 VDTKQVKIGDFGLV--TSLKNDGKRXRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILA 212
Query: 582 EIF-----SFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS 636
E+ +F ++ + ++ +I + T L++ + KP +RP+
Sbjct: 213 ELLHVCDTAFETSKFFTDLRDGII-----SDIFDKKEKT------LLQKLLSKKPEDRPN 261
Query: 637 FRTIYQTL 644
I +TL
Sbjct: 262 TSEILRTL 269
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 36/238 (15%)
Query: 350 DARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLV-AVKMLKDEAS 408
+A L K + E +D + +LG G G VF+ + H+ LV A K++ E
Sbjct: 10 EAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIK 63
Query: 409 EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYI 468
++ RE +L E + P IV G + + E+M G L+ L+
Sbjct: 64 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----- 118
Query: 469 NGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVV 527
R+P+ L +++ + G+ YL ++ K +HRD+ N L+N + +
Sbjct: 119 ------------RIPEQI---LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI 163
Query: 528 KIADFGLSRKMY--LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
K+ DFG+S ++ + + + G + +M E + Y+V+SD+W+ G+ L E+
Sbjct: 164 KLCDFGVSGQLIDSMANSFVGTRS------YMSPERLQGTHYSVQSDIWSMGLSLVEM 215
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLV-AVKMLKDEASEYLQTDFERE 418
+E +D + +LG G G VF+ + H+ LV A K++ E ++ RE
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L E + P IV G + + E+M G L+ L+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------------- 99
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVVKIADFGLSRK 537
R+P+ L +++ + G+ YL ++ K +HRD+ N L+N + +K+ DFG+S +
Sbjct: 100 --RIPEQI---LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 538 MY--LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
+ + + + G + +M E + Y+V+SD+W+ G+ L E+
Sbjct: 155 LIDSMANSFVGTRS------YMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 36/228 (15%)
Query: 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLV-AVKMLKDEASEYLQTDFERE 418
+E +D + +LG G G VF+ + H+ LV A K++ E ++ RE
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRE 54
Query: 419 ACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
+L E + P IV G + + E+M G L+ L+
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--------------- 99
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVVKIADFGLSRK 537
R+P+ L +++ + G+ YL ++ K +HRD+ N L+N + +K+ DFG+S +
Sbjct: 100 --RIPEQI---LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 154
Query: 538 MY--LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
+ + + + G + +M E + Y+V+SD+W+ G+ L E+
Sbjct: 155 LIDSMANSFVGTRS------YMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 123/299 (41%), Gaps = 37/299 (12%)
Query: 354 NPKLEQLEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
P+ +Q E R DI RD LG GAF V A+ K LVA+K + EA E +
Sbjct: 7 GPRWKQAEDIR-DIYDFRDVLGTGAFSEVILAEDKRTQK-----LVAIKCIAKEALEGKE 60
Query: 413 TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
E E +L + HPNIV L + G + L+ + + G+L F RI G Y
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVE-----KGFY 113
Query: 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL---INDQMVVKI 529
+ ++S + Q+ + YL D VHRDL N L +++ + I
Sbjct: 114 TERDAS-------------RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589
+DFGLS+ ++D ++ E + Y+ D W+ GV + I
Sbjct: 161 SDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYP 216
Query: 590 PYYGLTHEEVVKYIKEGNI-LQAP--DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
P+Y ++ + I + +P D+ D+ D ++ P R + Q W
Sbjct: 217 PFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 22/273 (8%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+G G++GR + + K + LV ++ +E + E LL E HPNIV+
Sbjct: 14 IGTGSYGRCQKIRR----KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 433 LLG--VCAVGKPMCLLFEYMGRGDLNDFL-RICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+ + ++ EY GDL + + Y++ E + RV T
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD------EEFVLRVMTQLTLA 123
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
L + G L HRDL N ++ + VK+ DFGL+R + D
Sbjct: 124 LKECHRRSDGGHTVL------HRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKAF 176
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
P +M E + Y +SD+W+ G L+E+ + + P+ + +E+ I+EG
Sbjct: 177 VGTPY-YMSPEQMNRMSYNEKSDIWSLGCLLYELCAL-MPPFTAFSQKELAGKIREGKFR 234
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
+ P D L +++ N+K +RPS I +
Sbjct: 235 RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 22/273 (8%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+G G++GR + + K + LV ++ +E + E LL E HPNIV+
Sbjct: 14 IGTGSYGRCQKIRR----KSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 433 LLG--VCAVGKPMCLLFEYMGRGDLNDFL-RICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+ + ++ EY GDL + + Y++ E + RV T
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD------EEFVLRVMTQLTLA 123
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
L + G L HRDL N ++ + VK+ DFGL+R + D
Sbjct: 124 LKECHRRSDGGHTVL------HRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKTF 176
Query: 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609
P +M E + Y +SD+W+ G L+E+ + + P+ + +E+ I+EG
Sbjct: 177 VGTPY-YMSPEQMNRMSYNEKSDIWSLGCLLYELCAL-MPPFTAFSQKELAGKIREGKFR 234
Query: 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
+ P D L +++ N+K +RPS I +
Sbjct: 235 RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 123/299 (41%), Gaps = 37/299 (12%)
Query: 354 NPKLEQLEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
P+ +Q E R DI RD LG GAF V A+ K LVA+K + EA E +
Sbjct: 7 GPRWKQAEDIR-DIYDFRDVLGTGAFSEVILAEDKRTQK-----LVAIKCIAKEALEGKE 60
Query: 413 TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
E E +L + HPNIV L + G + L+ + + G+L F RI G Y
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVE-----KGFY 113
Query: 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL---INDQMVVKI 529
+ ++S + Q+ + YL D VHRDL N L +++ + I
Sbjct: 114 TERDAS-------------RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589
+DFGLS+ ++D ++ E + Y+ D W+ GV + I
Sbjct: 161 SDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYP 216
Query: 590 PYYGLTHEEVVKYIKEGNI-LQAP--DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
P+Y ++ + I + +P D+ D+ D ++ P R + Q W
Sbjct: 217 PFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|1PMK|A Chain A, Kringle-Kringle Interactions In Multimer Kringle
Structures
pdb|1PMK|B Chain B, Kringle-Kringle Interactions In Multimer Kringle
Structures
pdb|1KRN|A Chain A, Structure Of Kringle 4 At 4c Temperature And 1.67
Angstroms Resolution
Length = 88
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
DC G G+ Y+GT +TT G CQ W + PH H++ P +P + NYCRN ++
Sbjct: 3 DCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRHQKTPENYPNAGLTMNYCRNPDADK-G 61
Query: 246 PWCYTMDPNVRWQRCEIPTCADS 268
PWC+T DP+VRW+ C + C+ +
Sbjct: 62 PWCFTTDPSVRWEYCNLKKCSGT 84
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 33/260 (12%)
Query: 370 VRDLGQGAFGRVFQA-KAPGLLKHEEFTLVAVK--MLKDEASEYLQTDFEREACLLAEFD 426
+R LG+G +G+VFQ K G + F + +K M+ A + T ER +L E
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN--ILEEVK 79
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
HP IV L+ G + L+ EY+ G+L F+++ ++ T
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDT--------------- 122
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
C + +I+ + +L + ++RDL N ++N Q VK+ DFGL + + + G
Sbjct: 123 ACFYLA---EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDG 175
Query: 547 DENDAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
+ +M E ++ + + D W+ G ++++ + A P+ G ++ + I
Sbjct: 176 TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA-PPFTGENRKKTIDKIL 234
Query: 605 EGNILQAPDNTPDALYDLMK 624
+ + P T +A DL+K
Sbjct: 235 KCKLNLPPYLTQEA-RDLLK 253
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 124/296 (41%), Gaps = 56/296 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+G G FG+VF+AK + + + + VK ++A ERE LA+ DH NIV
Sbjct: 20 IGSGGFGQVFKAKHR--IDGKTYVIRRVKYNNEKA--------EREVKALAKLDHVNIVH 69
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICS--PNNYINGTYS---------------SM 475
G C G F+Y +D L P N N + S ++
Sbjct: 70 YNG-CWDG------FDYDPETS-DDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 476 ESSIH--RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG 533
E I R +L + + QI G+ Y+ +K +HRDL N + D VKI DFG
Sbjct: 122 EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 534 LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF-----SFAL 588
L L++ K + +R+M E I Y E D++A G+ L E+ +F
Sbjct: 182 LV--TSLKNDGKRTRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET 238
Query: 589 QPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
++ + ++ +I + T L++ + KP +RP+ I +TL
Sbjct: 239 SKFFTDLRDGII-----SDIFDKKEKT------LLQKLLSKKPEDRPNTSEILRTL 283
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 33/260 (12%)
Query: 370 VRDLGQGAFGRVFQA-KAPGLLKHEEFTLVAVK--MLKDEASEYLQTDFEREACLLAEFD 426
+R LG+G +G+VFQ K G + F + +K M+ A + T ER +L E
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN--ILEEVK 79
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
HP IV L+ G + L+ EY+ G+L F+++ ++ T
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDT--------------- 122
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
C + +I+ + +L + ++RDL N ++N Q VK+ DFGL + + + G
Sbjct: 123 ACFYLA---EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDG 175
Query: 547 DENDAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
+ +M E ++ + + D W+ G ++++ + A P+ G ++ + I
Sbjct: 176 TVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA-PPFTGENRKKTIDKIL 234
Query: 605 EGNILQAPDNTPDALYDLMK 624
+ + P T +A DL+K
Sbjct: 235 KCKLNLPPYLTQEA-RDLLK 253
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 123/299 (41%), Gaps = 37/299 (12%)
Query: 354 NPKLEQLEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ 412
P+ +Q E R DI RD LG GAF V A+ K LVA+K + +A E +
Sbjct: 7 GPRWKQAEDIR-DIYDFRDVLGTGAFSEVILAEDKRTQK-----LVAIKCIAKKALEGKE 60
Query: 413 TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
E E +L + HPNIV L + G + L+ + + G+L F RI G Y
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVE-----KGFY 113
Query: 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL---INDQMVVKI 529
+ ++S + Q+ + YL D VHRDL N L +++ + I
Sbjct: 114 TERDAS-------------RLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589
+DFGLS+ ++D ++ E + Y+ D W+ GV + I
Sbjct: 161 SDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY-ILLCGYP 216
Query: 590 PYYGLTHEEVVKYIKEGNI-LQAP--DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
P+Y ++ + I + +P D+ D+ D ++ P R + Q W
Sbjct: 217 PFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 102/228 (44%), Gaps = 43/228 (18%)
Query: 373 LGQGAFGRVFQAKA--PGLLKHEEFTLVAVKMLKDEASEYLQTDFER---EACLLAEFDH 427
LG+G+F V++A++ GL VA+KM+ D+ + Y +R E + + H
Sbjct: 19 LGKGSFAGVYRAESIHTGLE-------VAIKMI-DKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
P+I++L + L+ E G++N +L+ +RV S
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLK-------------------NRVKPFSE 111
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR--KMYLQDYYK 545
+ QI +GM+YL +HRDL N L+ M +KIADFGL+ KM + +Y
Sbjct: 112 NEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT 171
Query: 546 --GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
G N P E + + +ESDVW+ G C++ P+
Sbjct: 172 LCGTPNYISP------EIATRSAHGLESDVWSLG-CMFYTLLIGRPPF 212
>pdb|2PK4|A Chain A, The Refined Structure Of The Epsilon-Aminocaproic Acid
Complex Of Human Plasminogen Kringle
Length = 80
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
DC G G+ Y+GT +TT G CQ W + PH H++ P +P + NYCRN ++
Sbjct: 2 DCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRHQKTPENYPNAGLTMNYCRNPDADK-G 60
Query: 246 PWCYTMDPNVRWQRCEIPTC 265
PWC+T DP+VRW+ C + C
Sbjct: 61 PWCFTTDPSVRWEYCNLKKC 80
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 36/240 (15%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASE--YLQTDFEREACLLAEFDH 427
+LG G F V + K+ GL E+ +K + AS + + ERE +L + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGL----EYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH 74
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNI+ L V + L+ E + G+L DFL + ES LS
Sbjct: 75 PNIITLHDVYENRTDVVLILELVSGGELFDFL-------------AQKES-------LSE 114
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDY 543
+ + QI G+ YL +K H DL N ++ D+ + +K+ DFGL+ + ++D
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDG 172
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ P P E + Y +E+D+W+ GV + + S A P+ G T +E + I
Sbjct: 173 VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANI 230
>pdb|1PK4|A Chain A, Crystal And Molecular Structure Of Human Plasminogen
Kringle 4 Refined At 1.9-angstroms Resolution
Length = 79
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPS 245
DC G G+ Y+GT +TT G CQ W + PH H++ P +P + NYCRN ++
Sbjct: 1 DCYHGDGQSYRGTSSTTTTGKKCQSWSSMTPHRHQKTPENYPNAGLTMNYCRNPDADK-G 59
Query: 246 PWCYTMDPNVRWQRCEIPTC 265
PWC+T DP+VRW+ C + C
Sbjct: 60 PWCFTTDPSVRWEYCNLKKC 79
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 25/244 (10%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
D ++ LG+G+FG+V ++ G + L AVK+LK + +Q D C + E
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDE-----LYAVKILKKDV--VIQDD--DVECTMVE 391
Query: 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
++ L G + F+ M R + Y+NG + I +V +
Sbjct: 392 ---KRVLALPGKPPFLTQLHSCFQTMDR--------LYFVMEYVNG--GDLMYHIQQVGR 438
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
+ A +IA G+ +L + ++RDL N +++ + +KIADFG+ ++ + D
Sbjct: 439 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGV 497
Query: 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
P P E I Y Y D WAFGV L+E+ + P+ G +E+ + I
Sbjct: 498 TTKXFCGTPDYIAP-EIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSIM 555
Query: 605 EGNI 608
E N+
Sbjct: 556 EHNV 559
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 111/278 (39%), Gaps = 35/278 (12%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFDHPN 429
R LG+G FG V+ A+ + +F L + K + + ++ RE + + HPN
Sbjct: 18 RPLGKGKFGNVYLARE----RQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L G + L+ EY G + L+ S R + T
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----------------RFDEQRTAT 116
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
IT ++A+ + Y ++ +HRD+ N L+ +KIADFG S +
Sbjct: 117 YIT---ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS------VHAPSSRR 167
Query: 550 DAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
+ + ++P E I + + D+W+ GV +E F + P+ T++E + I
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRRISRVE 226
Query: 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
PD + DL+ R + + + W
Sbjct: 227 -FTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYL 411
+ P+ QL++ +G+GA+G V A H T VA+K + E Y
Sbjct: 41 VGPRYTQLQY----------IGEGAYGMVSSA-----YDHVRKTRVAIKKISPFEHQTYC 85
Query: 412 QTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT 471
Q RE +L F H N++ + + + Y+ + D +
Sbjct: 86 QRTL-REIQILLRFRHENVIGIRDILRASTLEAMRDVYI----VQDLME--------TDL 132
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
Y ++S QLS + QI G+ Y+ +HRDL N LIN +KI D
Sbjct: 133 YKLLKSQ-----QLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICD 187
Query: 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
FGL+R + + G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 188 FGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 25/244 (10%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
D ++ LG+G+FG+V ++ G + L AVK+LK + +Q D C + E
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDE-----LYAVKILKKDV--VIQDD--DVECTMVE 70
Query: 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
++ L G + F+ M R + Y+NG + I +V +
Sbjct: 71 ---KRVLALPGKPPFLTQLHSCFQTMDR--------LYFVMEYVNG--GDLMYHIQQVGR 117
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
+ A +IA G+ +L + ++RDL N +++ + +KIADFG+ ++ + D
Sbjct: 118 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGV 176
Query: 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
P P E I Y Y D WAFGV L+E+ + P+ G +E+ + I
Sbjct: 177 TTKXFCGTPDYIAP-EIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSIM 234
Query: 605 EGNI 608
E N+
Sbjct: 235 EHNV 238
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 38/239 (15%)
Query: 350 DARLNPKLEQLEFPRNDIIYVRDLGQGAFGRV--FQAKAPGLLKHEEFTLVAVKMLKDEA 407
+A L K + E +D + +LG G G V Q + GL+ +A K++ E
Sbjct: 1 EAFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLI-------MARKLIHLEI 53
Query: 408 SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNY 467
++ RE +L E + P IV G + + E+M G L+ L+
Sbjct: 54 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK------- 106
Query: 468 INGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMV 526
R+P+ L +++ + G+ YL ++ + +HRD+ N L+N +
Sbjct: 107 ----------EAKRIPEEI---LGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE 153
Query: 527 VKIADFGLSRKMY--LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
+K+ DFG+S ++ + + + G + +M E + Y+V+SD+W+ G+ L E+
Sbjct: 154 IKLCDFGVSGQLIDSMANSFVGTRS------YMAPERLQGTHYSVQSDIWSMGLSLVEL 206
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 36/252 (14%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+ LG+G +G V+ KA + +E + +++ +E E + RE LL E H N
Sbjct: 39 ITKLGEGTYGEVY--KAIDTVTNETVAIKRIRLEHEE--EGVPGTAIREVSLLKELQHRN 94
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L V + L+FEY ND + N P +S
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAE----NDLKKYMDKN-----------------PDVSMRV 133
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLI-----NDQMVVKIADFGLSRKMYLQDYY 544
+ + Q+ +G+ + R+ +HRDL +N L+ ++ V+KI DFGL+R +
Sbjct: 134 IKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP--I 191
Query: 545 KGDENDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ ++ I + + P E +L ++ Y+ D+W+ C+W + G E+ +
Sbjct: 192 RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIA-CIWAEMLMKTPLFPG--DSEIDQLF 248
Query: 604 KEGNILQAPDNT 615
K +L PD+T
Sbjct: 249 KIFEVLGLPDDT 260
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 35/287 (12%)
Query: 369 YVR--DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD 426
YVR +G+G+FG+ K+ ++ + + + + + E + + RE +LA
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTE--DGRQYVIKEINISRMSSKE--REESRREVAVLANMK 81
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
HPNIV+ + ++ +Y GDL F RI + +
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDL--FKRINAQKGVL----------------FQ 123
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
++ +QI + ++ DRK +HRD+ ++N + V++ DFG++R + +
Sbjct: 124 EDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTVE 180
Query: 547 DENDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605
I + I NK Y +SD+WA G L+E+ + G V+K I
Sbjct: 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII-S 239
Query: 606 GNILQAPDNTPDALYDLMKLC---WNMKPMNRPSFRTIYQTLWNIKR 649
G+ P + YDL L + P +RPS +I + + KR
Sbjct: 240 GSF---PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 370 VRDLGQGAFG--RVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH 427
V+D+G G FG R+ + K LVAVK + E E + + +RE H
Sbjct: 24 VKDIGAGNFGVARLMRDKQAN-------ELVAVKYI--ERGEKIDENVKREIINHRSLRH 74
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIV+ V + ++ EY G+L F RIC+ G +S E+
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNA-----GRFSEDEARF-------- 119
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV--VKIADFGLSRKMYLQDYYK 545
Q+ SG+ Y + HRDL N L++ +KIADFG S+ L K
Sbjct: 120 -----FFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPK 174
Query: 546 GDENDAIPVRWMPLESILYNKYTVE-SDVWAFGVCLW 581
P P E +L +Y + +DVW+ GV L+
Sbjct: 175 SAV--GTPAYIAP-EVLLKKEYDGKVADVWSCGVTLY 208
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 31/233 (13%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG G FG+V + + ++ + +KD + + + E ++ + DH N+++
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD------KEEVKNEISVMNQLDHANLIQ 150
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLIT 492
L + L+ EY+ G+L F RI I+ +Y+ L+ D I
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGEL--FDRI------IDESYN-----------LTELDTIL 191
Query: 493 IALQIASGMVYLSDRKFVHRDLATRN--CLINDQMVVKIADFGLSRKMYLQDYYKGDEND 550
QI G+ ++ +H DL N C+ D +KI DFGL+R+ ++ K N
Sbjct: 192 FMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK--VNF 249
Query: 551 AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
P P E + Y+ + +D+W+ GV + + S L P+ G E + I
Sbjct: 250 GTPEFLAP-EVVNYDFVSFPTDMWSVGVIAYMLLS-GLSPFLGDNDAETLNNI 300
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 103/240 (42%), Gaps = 53/240 (22%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD--EASEYLQTDFEREACLLAEFD- 426
V+ LG+GA+G V+++ + +VAVK + D + S Q F RE +L E
Sbjct: 14 VKKLGKGAYGIVWKS-----IDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSG 67
Query: 427 HPNIVKLLGVCAVG--KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
H NIV LL V + + L+F+YM DL+ +R +++ +H+
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVIR------------ANILEPVHKQ-- 112
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY----- 539
+ Q+ + YL +HRD+ N L+N + VK+ADFGLSR
Sbjct: 113 -------YVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV 165
Query: 540 ----------LQDYYKGDE---NDAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
+ + D+ D + RW IL KYT D+W+ G L EI
Sbjct: 166 TNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 39/290 (13%)
Query: 373 LGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQT-DFEREACLLAEFDHPN 429
+G+GAF V + + G ++F + V + K +S L T D +REA + HP+
Sbjct: 32 IGKGAFSVVRRCINRETG----QQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+LL + + ++FE+M DL + + ++ YS +S +
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV---YSEAVASHY--------- 135
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRKMYLQDYYKG 546
QI + Y D +HRD+ N L+ + VK+ DFG++ ++ G
Sbjct: 136 ----MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAG 191
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P +M E + Y DVW GV L+ + S L P+YG T E + + I +G
Sbjct: 192 GRV-GTP-HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCL-PFYG-TKERLFEGIIKG 247
Query: 607 NILQAP---DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL---WNIKRD 650
P + ++ DL++ + P R T+Y+ L W +RD
Sbjct: 248 KYKMNPRQWSHISESAKDLVRRMLMLDPAERI---TVYEALNHPWLKERD 294
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 36/240 (15%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASE--YLQTDFEREACLLAEFDH 427
+LG G F V + K+ GL E+ +K + AS + + ERE +L + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGL----EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
N++ L V + L+ E + G+L DFL + ES LS
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFL-------------AQKES-------LSE 114
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDY 543
+ + QI G+ YL +K H DL N ++ D+ + +K+ DFGL+ + ++D
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDG 172
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ P P E + Y +E+D+W+ GV + + S A P+ G T +E + I
Sbjct: 173 VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANI 230
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 44/251 (17%)
Query: 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLA 423
R I++ LG GAF VF K K L A+K +K ++ + + E E +L
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGK-----LFALKCIK-KSPAFRDSSLENEIAVLK 61
Query: 424 EFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
+ H NIV L + L+ + + G+L D RI G Y+ ++S+
Sbjct: 62 KIKHENIVTLEDIYESTTHYYLVMQLVSGGELFD--RILE-----RGVYTEKDASL---- 110
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRKMYL 540
+ Q+ S + YL + VHRDL N L + + I DFGLS
Sbjct: 111 ---------VIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS----- 156
Query: 541 QDYYKGDENDAIPVR-----WMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
K ++N + ++ E + Y+ D W+ GV + I P+Y T
Sbjct: 157 ----KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITY-ILLCGYPPFYEET 211
Query: 596 HEEVVKYIKEG 606
++ + IKEG
Sbjct: 212 ESKLFEKIKEG 222
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 36/240 (15%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASE--YLQTDFEREACLLAEFDH 427
+LG G F V + K+ GL E+ +K + AS + + ERE +L + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGL----EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
N++ L V + L+ E + G+L DFL + ES LS
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFL-------------AQKES-------LSE 114
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDY 543
+ + QI G+ YL +K H DL N ++ D+ + +K+ DFGL+ + ++D
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDG 172
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ P P E + Y +E+D+W+ GV + + S A P+ G T +E + I
Sbjct: 173 VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANI 230
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 36/240 (15%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASE--YLQTDFEREACLLAEFDH 427
+LG G F V + K+ GL E+ +K + AS + + ERE +L + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGL----EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
N++ L V + L+ E + G+L DFL + ES LS
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFL-------------AQKES-------LSE 114
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDY 543
+ + QI G+ YL +K H DL N ++ D+ + +K+ DFGL+ + ++D
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDG 172
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ P P E + Y +E+D+W+ GV + + S A P+ G T +E + I
Sbjct: 173 VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANI 230
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 36/240 (15%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASE--YLQTDFEREACLLAEFDH 427
+LG G F V + K+ GL E+ +K + AS + + ERE +L + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGL----EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
N++ L V + L+ E + G+L DFL + ES LS
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFL-------------AQKES-------LSE 114
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDY 543
+ + QI G+ YL +K H DL N ++ D+ + +K+ DFGL+ + ++D
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDG 172
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ P P E + Y +E+D+W+ GV + + S A P+ G T +E + I
Sbjct: 173 VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANI 230
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 370 VRDLGQGAFG--RVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH 427
V+D+G G FG R+ + K + LVAVK + E E + + +RE H
Sbjct: 24 VKDIGSGNFGVARLMRDK-------QSNELVAVKYI--ERGEKIAANVKREIINHRSLRH 74
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIV+ V + ++ EY G+L F RIC+ G +S E+
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNA-----GRFSEDEARF-------- 119
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV--VKIADFGLSRKMYLQDYYK 545
Q+ SG+ Y + HRDL N L++ +KI DFG S+ L K
Sbjct: 120 -----FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 174
Query: 546 GDENDAIPVRWMPLESILYNKYTVE-SDVWAFGVCLW 581
P P E +L +Y + +DVW+ GV L+
Sbjct: 175 S--TVGTPAYIAP-EVLLKKEYDGKVADVWSCGVTLY 208
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 354 NPKLEQLEF---PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY 410
+P + +L F P +R++G G+FG V+ A+ +++ E + + S
Sbjct: 40 DPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARD---VRNSEVVAIKKMSYSGKQSNE 96
Query: 411 LQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYING 470
D +E L + HPN ++ G L+ EY G +D L
Sbjct: 97 KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL----------- 144
Query: 471 TYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530
+H+ P L ++ + G+ YL +HRD+ N L+++ +VK+
Sbjct: 145 -------EVHKKP-LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG 196
Query: 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEI 583
DFG + M + + G WM E IL +Y + DVW+ G+ E+
Sbjct: 197 DFGSASIMAPANXFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 36/240 (15%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASE--YLQTDFEREACLLAEFDH 427
+LG G F V + K+ GL E+ +K + AS + + ERE +L + H
Sbjct: 19 ELGSGQFAIVKKCREKSTGL----EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
N++ L V + L+ E + G+L DFL + ES LS
Sbjct: 75 HNVITLHDVYENRTDVVLILELVSGGELFDFL-------------AQKES-------LSE 114
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV----VKIADFGLSRKMYLQDY 543
+ + QI G+ YL +K H DL N ++ D+ + +K+ DFGL+ + ++D
Sbjct: 115 EEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDG 172
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ P P E + Y +E+D+W+ GV + + S A P+ G T +E + I
Sbjct: 173 VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYILLSGA-SPFLGDTKQETLANI 230
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 370 VRDLGQGAFG--RVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH 427
V+D+G G FG R+ + K + LVAVK + E E + + +RE H
Sbjct: 23 VKDIGSGNFGVARLMRDK-------QSNELVAVKYI--ERGEKIDENVKREIINHRSLRH 73
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIV+ V + ++ EY G+L F RIC+ G +S E+
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNA-----GRFSEDEARF-------- 118
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV--VKIADFGLSRKMYLQDYYK 545
Q+ SG+ Y + HRDL N L++ +KI DFG S+ L K
Sbjct: 119 -----FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 173
Query: 546 GDENDAIPVRWMPLESILYNKYTVE-SDVWAFGVCLW 581
P P E +L +Y + +DVW+ GV L+
Sbjct: 174 S--TVGTPAYIAP-EVLLKKEYDGKVADVWSCGVTLY 207
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKML-KDEASEYLQTDFE-REACLLAEFD 426
++ +G G+FGRV L+KH E A+K+L K + + Q + E +L +
Sbjct: 46 IKTIGTGSFGRVM------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
P +VKL + ++ EYM GD M S + R+ + S
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGD--------------------MFSHLRRIGRFS 139
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
A QI YL ++RDL N LI+ Q +K+ADFG ++++ + +
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC 199
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 200 ----GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKML-KDEASEYLQTDFE-REACLLAEFD 426
++ +G G+FGRV L+KH E A+K+L K + + Q + E +L +
Sbjct: 46 IKTIGTGSFGRVM------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
P +VKL + ++ EYM GD M S + R+ + S
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGD--------------------MFSHLRRIGRFS 139
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
A QI YL ++RDL N LI+ Q +K+ADFG ++++ + +
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC 199
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 200 ----GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 104/259 (40%), Gaps = 41/259 (15%)
Query: 398 VAVKMLK-DEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV--GKPMCLLFEYMGRGD 454
+ VK+LK + S DF E L F HPN++ +LG C L+ +M G
Sbjct: 36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS 95
Query: 455 LNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRK--FVHR 512
L + L GT ++ S + AL +A GM +L +
Sbjct: 96 LYNVLH--------EGTNFVVDQS----------QAVKFALDMARGMAFLHTLEPLIPRH 137
Query: 513 DLATRNCLINDQMVVKIA------DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK 566
L +R+ +I++ M +I+ F +MY + + L+ +
Sbjct: 138 ALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEA----------LQKKPEDT 187
Query: 567 YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV-VKYIKEGNILQAPDNTPDALYDLMKL 625
+D+W+F V LWE+ + + P+ L++ E+ +K EG P + LMK+
Sbjct: 188 NRRSADMWSFAVLLWELVTREV-PFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKI 246
Query: 626 CWNMKPMNRPSFRTIYQTL 644
C N P RP F I L
Sbjct: 247 CMNEDPAKRPKFDMIVPIL 265
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 354 NPKLEQLEF---PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY 410
+P + +L F P +R++G G+FG V+ A+ +++ E + + S
Sbjct: 1 DPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARD---VRNSEVVAIKKMSYSGKQSNE 57
Query: 411 LQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYING 470
D +E L + HPN ++ G L+ EY G +D L
Sbjct: 58 KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL----------- 105
Query: 471 TYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530
+H+ P L ++ + G+ YL +HRD+ N L+++ +VK+
Sbjct: 106 -------EVHKKP-LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG 157
Query: 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEI 583
DFG + M + + G WM E IL +Y + DVW+ G+ E+
Sbjct: 158 DFGSASIMAPANXFVGTP------YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 33/216 (15%)
Query: 369 YVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
+V+D+G G FG V + L K LVAVK ++ A+ + + +RE HP
Sbjct: 24 FVKDIGSGNFG-VARLMRDKLTKE----LVAVKYIERGAA--IDENVQREIINHRSLRHP 76
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
NIV+ V + ++ EY G+L + RIC+ G +S E+
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGEL--YERICN-----AGRFSEDEARF--------- 120
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV--VKIADFGLSRKMYLQDYYKG 546
Q+ SG+ Y + HRDL N L++ +KI DFG S+ L K
Sbjct: 121 ----FFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 176
Query: 547 DENDAIPVRWMPLESILYNKYTVE-SDVWAFGVCLW 581
P P E +L +Y + +DVW+ GV L+
Sbjct: 177 --TVGTPAYIAP-EVLLRQEYDGKIADVWSCGVTLY 209
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 128/324 (39%), Gaps = 74/324 (22%)
Query: 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF 425
DI + +G+G +G V++ G E V + +DE S + +T+ L
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQG-----ENVAVKIFSSRDEKSWFRETELYNTVML---- 59
Query: 426 DHPNIVKLLGVCAVGK----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
H NI+ + + + L+ Y G L D+L++ +
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT------------------ 101
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKF--------VHRDLATRNCLINDQMVVKIADFG 533
L T + I L IASG+ +L F HRDL ++N L+ IAD G
Sbjct: 102 ---LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 158
Query: 534 LSRKMYLQDYYKGDENDAIPV---RWMPLESI-------LYNKYTVESDVWAFGVCLWEI 583
L+ M+ Q + D + V R+M E + ++ Y D+WAFG+ LWE+
Sbjct: 159 LA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYK-RVDIWAFGLVLWEV 216
Query: 584 FSFALQ---------PYYGL-----THEEVVKYI----KEGNILQA--PDNTPDALYDLM 623
+ P+Y + + E++ K + + NI D T +L LM
Sbjct: 217 ARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLM 276
Query: 624 KLCWNMKPMNRPSFRTIYQTLWNI 647
K CW P R + I +TL I
Sbjct: 277 KECWYQNPSARLTALRIKKTLTKI 300
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+GQG FG VF+A+ + + K+L + E RE +L H N+V
Sbjct: 26 IGQGTFGEVFKARH----RKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT-YSSMESSIHRVPQLSTCDLI 491
L+ +C SP N G+ Y + H + L + L+
Sbjct: 82 LIEICRTK---------------------ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 120
Query: 492 TIALQ--------IASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
L + +G+ Y+ K +HRD+ N LI V+K+ADFGL+R L
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 544 YKGDE--NDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFS 585
+ + N + + + P E +L + Y D+W G + E+++
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+GQG FG VF+A+ + + K+L + E RE +L H N+V
Sbjct: 26 IGQGTFGEVFKARH----RKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT-YSSMESSIHRVPQLSTCDLI 491
L+ +C SP N G+ Y + H + L + L+
Sbjct: 82 LIEICRTK---------------------ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 120
Query: 492 TIALQ--------IASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
L + +G+ Y+ K +HRD+ N LI V+K+ADFGL+R L
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 544 YKGDE--NDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFS 585
+ + N + + + P E +L + Y D+W G + E+++
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 109/274 (39%), Gaps = 31/274 (11%)
Query: 371 RDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
R LG+G FG VF Q KA G L K + Y E++ +LA+
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYA---CKKLNKKRLKKRKGYQGAMVEKK--ILAKVHSR 245
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
IV L +CL+ M GD+ + +N P
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN----------------PGFQEP 289
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGD 547
I QI SG+ +L R ++RDL N L++D V+I+D GL+ ++ Q KG
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG- 348
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
A +M E +L +Y D +A GV L+E+ + A P+ + K +K+
Sbjct: 349 --YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA-ARGPFRARGEKVENKELKQRV 405
Query: 608 ILQA---PDNTPDALYDLMKLCWNMKPMNRPSFR 638
+ QA PD A D + P R FR
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+GQG FG VF+A+ + + K+L + E RE +L H N+V
Sbjct: 25 IGQGTFGEVFKARH----RKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 80
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGT-YSSMESSIHRVPQLSTCDLI 491
L+ +C SP N G+ Y + H + L + L+
Sbjct: 81 LIEICRTK---------------------ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 119
Query: 492 TIALQ--------IASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
L + +G+ Y+ K +HRD+ N LI V+K+ADFGL+R L
Sbjct: 120 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 179
Query: 544 YKGDE--NDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFS 585
+ + N + + + P E +L + Y D+W G + E+++
Sbjct: 180 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 109/274 (39%), Gaps = 31/274 (11%)
Query: 371 RDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
R LG+G FG VF Q KA G L K + Y E++ +LA+
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYA---CKKLNKKRLKKRKGYQGAMVEKK--ILAKVHSR 245
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
IV L +CL+ M GD+ + +N P
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN----------------PGFQEP 289
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGD 547
I QI SG+ +L R ++RDL N L++D V+I+D GL+ ++ Q KG
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG- 348
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
A +M E +L +Y D +A GV L+E+ + A P+ + K +K+
Sbjct: 349 --YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA-ARGPFRARGEKVENKELKQRV 405
Query: 608 ILQA---PDNTPDALYDLMKLCWNMKPMNRPSFR 638
+ QA PD A D + P R FR
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 108/273 (39%), Gaps = 29/273 (10%)
Query: 371 RDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
R LG+G FG VF Q KA G L K + Y E++ +LA+
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYA---CKKLNKKRLKKRKGYQGAMVEKK--ILAKVHSR 245
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
IV L +CL+ M GD+ + +N P
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN----------------PGFQEP 289
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
I QI SG+ +L R ++RDL N L++D V+I+D GL+ + L+ +
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTK 347
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
A +M E +L +Y D +A GV L+E+ + A P+ + K +K+ +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA-ARGPFRARGEKVENKELKQRVL 406
Query: 609 LQA---PDNTPDALYDLMKLCWNMKPMNRPSFR 638
QA PD A D + P R FR
Sbjct: 407 EQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 109/274 (39%), Gaps = 31/274 (11%)
Query: 371 RDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
R LG+G FG VF Q KA G L K + Y E++ +LA+
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYA---CKKLNKKRLKKRKGYQGAMVEKK--ILAKVHSR 245
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
IV L +CL+ M GD+ + +N P
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN----------------PGFQEP 289
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL-QDYYKGD 547
I QI SG+ +L R ++RDL N L++D V+I+D GL+ ++ Q KG
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG- 348
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607
A +M E +L +Y D +A GV L+E+ + A P+ + K +K+
Sbjct: 349 --YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA-ARGPFRARGEKVENKELKQRV 405
Query: 608 ILQA---PDNTPDALYDLMKLCWNMKPMNRPSFR 638
+ QA PD A D + P R FR
Sbjct: 406 LEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439
>pdb|1A0H|A Chain A, The X-Ray Crystal Structure Of Ppack-Meizothrombin Desf1:
KringleTHROMBIN AND CARBOHYDRATEKRINGLETHROMBIN
INTERACTIONS AND Location Of The Linker Chain
pdb|1A0H|D Chain D, The X-Ray Crystal Structure Of Ppack-Meizothrombin Desf1:
KringleTHROMBIN AND CARBOHYDRATEKRINGLETHROMBIN
INTERACTIONS AND Location Of The Linker Chain
Length = 159
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSP 246
C+ RGR Y+G + T G C W +++ A + P + +EN+CRN G+E
Sbjct: 7 CVPDRGREYRGRLAVTTHGSRCLAWSSEQAKALSKDQDFNPAVPLAENFCRNPDGDEEGA 66
Query: 247 WCYTMDPNVRWQRCEIPTCADSMQDDV 273
WCY D ++ C++ C + + D+
Sbjct: 67 WCYVADQPGDFEYCDLNYCEEPVDGDL 93
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+GQG FG VF+A+ + + K+L + E RE +L H N+V
Sbjct: 26 IGQGTFGEVFKARH----RKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 81
Query: 433 LLGVCAVGKP--------MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
L+ +C + L+F++ DL L N + T S I RV Q
Sbjct: 82 LIEICRTKASPYNRCKASIYLVFDFC-EHDLAGLL----SNVLVKFTLSE----IKRVMQ 132
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
+ + +G+ Y+ K +HRD+ N LI V+K+ADFGL+R L
Sbjct: 133 M-----------LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 181
Query: 545 KGDE--NDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFS 585
+ + N + + + P E +L + Y D+W G + E+++
Sbjct: 182 QPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 35/249 (14%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG+G FG VF+AK K ++ A+K ++ E + RE LA+ +HP IV+
Sbjct: 13 LGRGGFGVVFEAKN----KVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHPGIVR 67
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNN---YINGTYSSMESSIHRVPQLSTCD 489
L + L +++C N ++NG + E + S C
Sbjct: 68 YFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER------ERSVC- 120
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ I LQIA + +L + +HRDL N VVK+ DFGL M D + ++
Sbjct: 121 -LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM---DQDEEEQT 176
Query: 550 DAIPV-------------RWMPLESILYNKYTVESDVWAFGVCLWEI---FSFALQPYYG 593
P+ +M E I N Y+ + D+++ G+ L+E+ FS ++
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRT 236
Query: 594 LTHEEVVKY 602
LT +K+
Sbjct: 237 LTDVRNLKF 245
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 40/263 (15%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKML-KDEASEYLQTDFER---EACLLAEFDHP 428
+GQG++G V A ++++ + A+K++ K++ + D ER E L+ + HP
Sbjct: 34 IGQGSYGVVRVA-----IENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHP 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRI--------CSPN--------------N 466
NI +L V + +CL+ E G L D L + C+ +
Sbjct: 89 NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 467 YINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI--NDQ 524
ING+ S+ V + + I QI S + YL ++ HRD+ N L N
Sbjct: 149 AINGSIHGFRESLDFVQREKL--ISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206
Query: 525 MVVKIADFGLSRKMYL---QDYYKGDENDAIPVRWMP-LESILYNKYTVESDVWAFGVCL 580
+K+ DFGLS++ Y +YY P P + + Y + D W+ GV L
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 581 WEIFSFALQPYYGLTHEEVVKYI 603
+ A+ P+ G+ + + +
Sbjct: 267 HLLLMGAV-PFPGVNDADTISQV 288
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
ND Y++ LG+G FG+V + KA G + V + KDE + + E+ +L
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVL 62
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + ++ + +
Sbjct: 63 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFTEERARFY-- 113
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+I S + YL R V+RD+ N +++ +KI DFGL ++ + D
Sbjct: 114 -----------GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISD 161
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
P P E + N Y D W GV ++E+ L P+Y HE + +
Sbjct: 162 GATMKTFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHERLFEL 219
Query: 603 I 603
I
Sbjct: 220 I 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
ND Y++ LG+G FG+V + KA G + V + KDE + + E+ +L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVL 59
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + ++ + +
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFTEERARFY-- 110
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+I S + YL R V+RD+ N +++ +KI DFGL ++ + D
Sbjct: 111 -----------GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISD 158
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
P P E + N Y D W GV ++E+ L P+Y HE + +
Sbjct: 159 GATMKTFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHERLFEL 216
Query: 603 I 603
I
Sbjct: 217 I 217
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 370 VRDLGQGAFG--RVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH 427
V+D+G G FG R+ + K + LVAVK + E E + + +RE H
Sbjct: 24 VKDIGSGNFGVARLMRDK-------QSNELVAVKYI--ERGEKIDENVKREIINHRSLRH 74
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIV+ V + ++ EY G+L F RIC+ G +S E+
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNA-----GRFSEDEARF-------- 119
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV--VKIADFGLSRKMYLQDYYK 545
Q+ SG+ Y + HRDL N L++ +KI FG S+ L K
Sbjct: 120 -----FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK 174
Query: 546 GDENDAIPVRWMPLESILYNKYTVE-SDVWAFGVCLW 581
+ P P E +L +Y + +DVW+ GV L+
Sbjct: 175 --DTVGTPAYIAP-EVLLKKEYDGKVADVWSCGVTLY 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
ND Y++ LG+G FG+V + KA G + V + KDE + + E+ +L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVL 59
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + ++ + +
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFTEERARFY-- 110
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+I S + YL R V+RD+ N +++ +KI DFGL ++ + D
Sbjct: 111 -----------GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISD 158
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
P P E + N Y D W GV ++E+ L P+Y HE + +
Sbjct: 159 GATMKTFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHERLFEL 216
Query: 603 I 603
I
Sbjct: 217 I 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
ND Y++ LG+G FG+V + KA G + V + KDE + + E+ +L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVL 59
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + ++ + +
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFTEERARFY-- 110
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+I S + YL R V+RD+ N +++ +KI DFGL ++ + D
Sbjct: 111 -----------GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISD 158
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
P P E + N Y D W GV ++E+ L P+Y HE + +
Sbjct: 159 GATMKXFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHERLFEL 216
Query: 603 I 603
I
Sbjct: 217 I 217
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLA-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
+R LG G+FGRV L+KH+E A+K+L +++ L + +H
Sbjct: 47 IRTLGTGSFGRVM------LVKHKETGNHYAMKILD-----------KQKVVKLKQIEHT 89
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + AV P + E+ + + N ++ + Y G M S + R+ + S
Sbjct: 90 LNEKRIQ-QAVNFPFLVKLEFSFKDNSNLYMVL----EYAPG--GEMFSHLRRIGRFSEP 142
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +K+ADFG ++++ KG
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV------KGRT 196
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 197 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 254
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 255 KV-RFPSHFSSDLKDLLR 271
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
ND Y++ LG+G FG+V + KA G + V + KDE + + E+ +L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVL 59
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + ++ + +
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFTEERARFY-- 110
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+I S + YL R V+RD+ N +++ +KI DFGL ++ + D
Sbjct: 111 -----------GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISD 158
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
P P E + N Y D W GV ++E+ L P+Y HE + +
Sbjct: 159 GATMKXFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHERLFEL 216
Query: 603 I 603
I
Sbjct: 217 I 217
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
ND Y++ LG+G FG+V + KA G + V + KDE + + E+ +L
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVL 64
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + ++ + +
Sbjct: 65 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFTEERARFY-- 115
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+I S + YL R V+RD+ N +++ +KI DFGL ++ + D
Sbjct: 116 -----------GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISD 163
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
P P E + N Y D W GV ++E+ L P+Y HE + +
Sbjct: 164 GATMKXFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHERLFEL 221
Query: 603 I 603
I
Sbjct: 222 I 222
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 125/317 (39%), Gaps = 74/317 (23%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+G+G +G V++ G E V + +DE S + +T+ L H NI+
Sbjct: 16 VGKGRYGEVWRGSWQG-----ENVAVKIFSSRDEKSWFRETELYNTVML----RHENILG 66
Query: 433 LLGVCAVGK----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
+ + + L+ Y G L D+L++ + L T
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---------------------LDTV 105
Query: 489 DLITIALQIASGMVYLSDRKF--------VHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
+ I L IASG+ +L F HRDL ++N L+ IAD GL+ M+
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHS 164
Query: 541 QDYYKGDENDAIPV---RWMPLESI-------LYNKYTVESDVWAFGVCLWEIFSFALQ- 589
Q + D + V R+M E + ++ Y D+WAFG+ LWE+ +
Sbjct: 165 QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYK-RVDIWAFGLVLWEVARRMVSN 223
Query: 590 --------PYYGL-----THEEVVKYI----KEGNILQA--PDNTPDALYDLMKLCWNMK 630
P+Y + + E++ K + + NI D T +L LMK CW
Sbjct: 224 GIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQN 283
Query: 631 PMNRPSFRTIYQTLWNI 647
P R + I +TL I
Sbjct: 284 PSARLTALRIKKTLTKI 300
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH+E A+K+L +++ L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKHKETGNHFAMKILD-----------KQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + EY + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEYSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 195
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 196 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 106/282 (37%), Gaps = 32/282 (11%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
P+ +GQGA G V+ A + +E + + + + E + E ++
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIIN----EILVM 71
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
E +PNIV L VG + ++ EY+ G L D + T + M+
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----------TETCMDEG---- 116
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+ + + + +L + +HRD+ + N L+ VK+ DFG ++ +
Sbjct: 117 ------QIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PE 169
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K E P WM E + Y + D+W+ G+ E+ PY +
Sbjct: 170 QSKRSEMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYL 227
Query: 603 IKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
I LQ P+ D + C +M R S + + Q
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 97/241 (40%), Gaps = 30/241 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
ND Y++ LG+G FG+V + KA G + V + KDE + + E+ +L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVT-----ESRVL 59
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + ++ + +
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFTEERARFY-- 110
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+I S + YL R V+RD+ N +++ +KI DFGL ++ + D
Sbjct: 111 -----------GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISD 158
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
P P E + N Y D W GV ++E+ L P+Y HE + +
Sbjct: 159 GATMKXFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHERLFEL 216
Query: 603 I 603
I
Sbjct: 217 I 217
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH+E A+K+L +++ L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKHKETGNHFAMKILD-----------KQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + EY + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEYSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 195
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 196 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 131/335 (39%), Gaps = 75/335 (22%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD 414
P L Q R I + +G+G +G V++ G E V + +DE S + +T+
Sbjct: 28 PFLVQRTVARQ-ITLLECVGKGRYGEVWRGSWQG-----ENVAVKIFSSRDEKSWFRETE 81
Query: 415 FEREACLLAEFDHPNIVKLLGVCAVGK----PMCLLFEYMGRGDLNDFLRICSPNNYING 470
L H NI+ + + + L+ Y G L D+L++ +
Sbjct: 82 LYNTVML----RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT------- 130
Query: 471 TYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKF--------VHRDLATRNCLIN 522
L T + I L IASG+ +L F HRDL ++N L+
Sbjct: 131 --------------LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK 176
Query: 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPV---RWMPLESI-------LYNKYTVESD 572
IAD GL+ M+ Q + D + V R+M E + ++ Y D
Sbjct: 177 KNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYK-RVD 234
Query: 573 VWAFGVCLWEIFSFALQ---------PYYGL-----THEEVVKYI----KEGNILQA--P 612
+WAFG+ LWE+ + P+Y + + E++ K + + NI
Sbjct: 235 IWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFS 294
Query: 613 DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647
D T +L LMK CW P R + I +TL I
Sbjct: 295 DPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 329
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 92/217 (42%), Gaps = 37/217 (17%)
Query: 370 VRDLGQGAFG--RVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH 427
V+D+G G FG R+ + K + LVAVK + E E + + +RE H
Sbjct: 24 VKDIGSGNFGVARLMRDK-------QSNELVAVKYI--ERGEKIDENVKREIINHRSLRH 74
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
PNIV+ V + ++ EY G+L F RIC+ G +S E+
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNA-----GRFSEDEARF-------- 119
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV--VKIADFGLSRKMYLQDYYK 545
Q+ SG+ Y + HRDL N L++ +KI FG S+ L K
Sbjct: 120 -----FFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK 174
Query: 546 GDENDAIPVRWMPLESILYNKYTVE-SDVWAFGVCLW 581
P P E +L +Y + +DVW+ GV L+
Sbjct: 175 S--TVGTPAYIAP-EVLLKKEYDGKVADVWSCGVTLY 208
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH+E A+K+L +++ L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKHKETGNHFAMKILD-----------KQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + EY + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEYSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 34/244 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 85
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 131
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 132 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY----GLTHE 597
+++ E + SD+WA G ++++ + L P+ GL
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVA-GLPPFRAGNEGLIFA 244
Query: 598 EVVK 601
+++K
Sbjct: 245 KIIK 248
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL--- 198
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 199 -XGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 86
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 132
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 133 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 186
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+ +++ E + SD+WA G ++++ + L P+
Sbjct: 187 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 235
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 31/238 (13%)
Query: 369 YVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
YV+ +G+G+ G V A+ KH VAVKM+ + + F E ++ ++ H
Sbjct: 50 YVK-IGEGSTGIVCLARE----KHSGRQ-VAVKMMDLRKQQRRELLFN-EVVIMRDYQHF 102
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
N+V++ VG+ + +L E++ G L D + +L+
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV---------------------RLNEE 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
+ T+ + + YL + +HRD+ + + L+ VK++DFG ++ +D K
Sbjct: 142 QIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKX 200
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P WM E I + Y E D+W+ G+ + E+ PY+ + + +K +++
Sbjct: 201 LVGTPY-WMAPEVISRSLYATEVDIWSLGIMVIEMVD-GEPPYFSDSPVQAMKRLRDS 256
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
+A+ E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 202 PEALAP-----EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ +G G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 46 IKTIGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +K+ADFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 33 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 75
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 76 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFSEP 128
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI++Q +++ DFG ++++ KG
Sbjct: 129 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV------KGRT 182
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 183 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 240
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 241 KV-RFPSHFSSDLKDLLR 257
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 10 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 63
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 109
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 110 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 163
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 164 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 212
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 123/291 (42%), Gaps = 45/291 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V LG G V+ A+ L + + + A+ + E E L+ FERE ++ H N
Sbjct: 16 VDKLGGGGMSTVYLAEDTIL--NIKVAIKAIFIPPREKEETLKR-FEREVHNSSQLSHQN 72
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV ++ V L+ EY+ L++++ P LS
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP--------------------LSVDT 112
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
I QI G+ + D + VHRD+ +N LI+ +KI DFG+++ + + +
Sbjct: 113 AINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHV 172
Query: 550 DAIPVRWMPLESILYNKYTVE-SDVWAFGVCLWEIFSFALQPYYGLTHEEV-VKYIKEGN 607
+ P ++ + T E +D+++ G+ L+E+ P+ G T + +K+I++
Sbjct: 173 LGTVQYFSPEQA--KGEATDECTDIYSIGIVLYEML-VGEPPFNGETAVSIAIKHIQDS- 228
Query: 608 ILQAPDNTPDALYDLMKLCWNM-------KPMNRPSFRTIYQTLWNIKRDL 651
P+ T D D+ + N+ NR Y+T+ +K DL
Sbjct: 229 ---VPNVTTDVRKDIPQSLSNVILRATEKDKANR------YKTIQEMKDDL 270
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 9 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 62
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 108
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 109 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 162
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 163 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 211
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 34/244 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 85
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 131
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 132 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY----GLTHE 597
+++ E + SD+WA G ++++ + L P+ GL
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPFRAGNEGLIFA 244
Query: 598 EVVK 601
+++K
Sbjct: 245 KIIK 248
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 41/244 (16%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE 416
L L P V +G G +G+V++ + + L A+K++ E + + +
Sbjct: 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHV-----KTGQLAAIKVMDVTGDE--EEEIK 68
Query: 417 REACLLAEFDHP-NIVKLLGVCAVGKP------MCLLFEYMGRGDLNDFLRICSPNNYIN 469
+E +L ++ H NI G P + L+ E+ G G + D ++ N
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT--- 125
Query: 470 GTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
L + I +I G+ +L K +HRD+ +N L+ + VK+
Sbjct: 126 ---------------LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKL 170
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPV-RWMPLESILYNK-----YTVESDVWAFGVCLWEI 583
DFG+S ++ D G N I WM E I ++ Y +SD+W+ G+ E+
Sbjct: 171 VDFGVSAQL---DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
Query: 584 FSFA 587
A
Sbjct: 228 AEGA 231
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L E +H
Sbjct: 46 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKEIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYAPG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N +I+ Q +K+ DFGL++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 86/221 (38%), Gaps = 36/221 (16%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 51 IGEGAYGMVCSA-----YDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 104
Query: 432 KLLGVCAVG-----KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
+ + K + L+ MG DL L+ LS
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMG-ADLYKLLK---------------------TQHLS 142
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ QI G+ Y+ +HRDL N L+N +KI DFGL+R + G
Sbjct: 143 NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 202
Query: 547 DENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
+ + RW I+ N YT D+W+ G L E+ S
Sbjct: 203 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 85
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 131
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 132 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 7 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 60
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 106
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 107 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 160
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 161 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 209
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 86
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 132
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 133 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 186
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 187 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 235
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 117/288 (40%), Gaps = 44/288 (15%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
PR + +G+G+ G V A K VAVK + + + F E ++
Sbjct: 43 PREYLANFIKIGEGSTGIVCIATEKHTGKQ-----VAVKKMDLRKQQRRELLFN-EVVIM 96
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
++ H N+V + VG + ++ E++ G L D + T++ M
Sbjct: 97 RDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV-----------THTRMNEE---- 141
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+ T+ L + + YL ++ +HRD+ + + L+ +K++DFG ++ ++
Sbjct: 142 ------QIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS-KE 194
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K P WM E I Y E D+W+ G+ + E+ PY+ + ++
Sbjct: 195 VPKRKXLVGTPY-WMAPEVISRLPYGTEVDIWSLGIMVIEMID-GEPPYFNEPPLQAMRR 252
Query: 603 IKEGNILQAPDNTPDALYDLMKLC------WNMKPMNRPSFRTIYQTL 644
I+ D+ P + DL K+ ++ + PS R Q L
Sbjct: 253 IR--------DSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQEL 292
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 118/303 (38%), Gaps = 60/303 (19%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LGQGAFG+V KA L + + ++ +++ S L E LLA +H +V+
Sbjct: 14 LGQGAFGQV--VKARNALDSRYYAIKKIRHTEEKLSTILS-----EVMLLASLNHQYVVR 66
Query: 433 LLG-----------VCAVGKPMCLLF--EYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+ AV K L EY G L D + + N + +
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR--- 123
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
QI + Y+ + +HRDL N I++ VKI DFGL++ ++
Sbjct: 124 ----------------QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 540 LQ-DYYKGDEND----------AIPVRWMPLESIL--YNKYTVESDVWAFGVCLWE-IFS 585
D K D + AI +L Y + D+++ G+ +E I+
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227
Query: 586 FALQPYYGLTHEEVVKYIKEGNILQAP---DNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
F+ G+ ++K ++ +I P DN +++L + P RP RT+
Sbjct: 228 FST----GMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
Query: 643 TLW 645
+ W
Sbjct: 284 SGW 286
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 8 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 61
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 107
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 108 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 161
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 162 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 210
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 47 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 89
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 90 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFSEP 142
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 196
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 197 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 254
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 255 KV-RFPSHFSSDLKDLLR 271
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 36/248 (14%)
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLN 456
V + L E E ++ RE +L + HP+I+ L+ M L+F+ M +G+L
Sbjct: 129 VTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELF 188
Query: 457 DFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516
D+L +V LS + +I + + +L VHRDL
Sbjct: 189 DYL-------------------TEKVA-LSEKETRSIMRSLLEAVSFLHANNIVHRDLKP 228
Query: 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-------YNKYTV 569
N L++D M ++++DFG S +L+ K E P P IL + Y
Sbjct: 229 ENILLDDNMQIRLSDFGFS--CHLEPGEKLRELCGTPGYLAP--EILKCSMDETHPGYGK 284
Query: 570 ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI-LQAP--DNTPDALYDLMKLC 626
E D+WA GV L+ + + + P++ +++ I EG +P D+ + DL+
Sbjct: 285 EVDLWACGVILFTLLAGS-PPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRL 343
Query: 627 WNMKPMNR 634
+ P R
Sbjct: 344 LQVDPEAR 351
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 195
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 196 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 67 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 109
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 110 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFSEP 162
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGAT 216
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 217 WTLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 274
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 275 KV-RFPSHFSSDLKDLLR 291
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 83
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 129
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 130 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 40/260 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKML-KDEASEYLQTDFE-REACLLAEFD 426
++ LG G+FGRV L+KH+E A+K+L K + + Q + E +L +
Sbjct: 46 IKTLGTGSFGRVM------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
P +VKL + ++ EY+ G+ M S + R+ + S
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE--------------------MFSHLRRIGRFS 139
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KG 193
Query: 547 DEND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
P P E IL Y D WA GV ++E+ + P++ ++ + I
Sbjct: 194 RTWXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIV 251
Query: 605 EGNILQAPDNTPDALYDLMK 624
G + + P + L DL++
Sbjct: 252 SGKV-RFPSHFSSDLKDLLR 270
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH+E A+K+L +++ L + +H
Sbjct: 47 IKTLGTGSFGRVM------LVKHKETGNHYAMKILD-----------KQKVVKLKQIEHT 89
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 90 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 142
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 196
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 197 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 254
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 255 KV-RFPSHFSSDLKDLLR 271
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 35 IGEGAYGMVCSA-----YDNLNKVRVAIKKISPFEHQTYXQRTL-REIKILLRFRHENII 88
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 89 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 124
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 46/272 (16%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
PR+ + +G+G+ G V A LVAVK + + + F E ++
Sbjct: 149 PRSYLDNFIKIGEGSTGIVCIATV-----RSSGKLVAVKKMDLRKQQRRELLFN-EVVIM 202
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
++ H N+V++ VG + ++ E++ G L D + T++ M
Sbjct: 203 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----------THTRMNEE---- 247
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG----LSRKM 538
+ + L + + L + +HRD+ + + L+ VK++DFG +S+++
Sbjct: 248 ------QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301
Query: 539 YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598
+ G WM E I Y E D+W+ G+ + E+ PY+ +
Sbjct: 302 PRRKXLVGTPY------WMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPYFNEPPLK 354
Query: 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMK 630
+K I+ DN P L +L K+ ++K
Sbjct: 355 AMKMIR--------DNLPPRLKNLHKVSPSLK 378
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADEPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 88
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 134
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 135 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 188
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 189 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 237
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 96/228 (42%), Gaps = 26/228 (11%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK-MLKDEASEYLQTDFEREACLLA 423
D + + LG+G+F V A+ + ++ + ++K+ Y+ RE +++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT----RERDVMS 84
Query: 424 EFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
DHP VKL + + Y G+L ++R G++
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE--------- 128
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 129 ---TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 184
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+ +++ E + SD+WA G ++++ + L P+
Sbjct: 185 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 231
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 37/229 (16%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG+G +G V+ + L ++ +A+K + + S Y Q E L H NIV+
Sbjct: 30 LGKGTYGIVYAGRD---LSNQ--VRIAIKEIPERDSRYSQP-LHEEIALHKHLKHKNIVQ 83
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRI----CSPNNYINGTYSSMESSIHRVPQLSTC 488
LG + + + E + G L+ LR N G Y+
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-------------- 129
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLIND-QMVVKIADFGLSRKMYLQDYYKGD 547
QI G+ YL D + VHRD+ N LIN V+KI+DFG S++ L
Sbjct: 130 -------QILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCT 180
Query: 548 ENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFSFALQPYYGL 594
E +++M E I Y +D+W+ G + E+ + P+Y L
Sbjct: 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT-GKPPFYEL 228
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 195
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 196 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 85
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 131
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 132 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH+E A+K+L +++ L + +H
Sbjct: 47 IKTLGTGSFGRVM------LVKHKETGNHYAMKILD-----------KQKVVKLKQIEHT 89
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 90 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 142
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 196
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 197 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 254
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 255 KV-RFPSHFSSDLKDLLR 271
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 85
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G L ++R G++
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKI-------GSFDE------- 131
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 132 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+ +++ E + + SD+WA G ++++ + L P+
Sbjct: 186 SKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 83
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 129
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 130 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 85
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 131
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 132 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 186 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH+E A+K+L +++ L + +H
Sbjct: 67 IKTLGTGSFGRVM------LVKHKETGNHYAMKILD-----------KQKVVKLKQIEHT 109
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 110 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 162
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-- 220
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 221 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 276
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 277 -RFPSHFSSDLKDLLR 291
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 23/178 (12%)
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMG--RGDLNDFLRICSPNNYINGTYSS 474
RE ++ DH NIVK+ FE +G L D + + N +
Sbjct: 57 REIKIIRRLDHDNIVKV-------------FEILGPSGSQLTDDVGSLTELNSVYIVQEY 103
Query: 475 MESSIHRV----PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKI 529
ME+ + V P L + + Q+ G+ Y+ +HRDL N IN + +V+KI
Sbjct: 104 METDLANVLEQGPLLEEHARLFM-YQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKI 162
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIFS 585
DFGL+R M +KG ++ + +W +L N YT D+WA G E+ +
Sbjct: 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 37/237 (15%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG+G +G V+ + L ++ +A+K + + S Y Q E L H NIV+
Sbjct: 16 LGKGTYGIVYAGRD---LSNQ--VRIAIKEIPERDSRYSQP-LHEEIALHKHLKHKNIVQ 69
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRI----CSPNNYINGTYSSMESSIHRVPQLSTC 488
LG + + + E + G L+ LR N G Y+
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-------------- 115
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLIND-QMVVKIADFGLSRKMYLQDYYKGD 547
QI G+ YL D + VHRD+ N LIN V+KI+DFG S++ L
Sbjct: 116 -------QILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCT 166
Query: 548 ENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
E +++M E I Y +D+W+ G + E+ + P+Y L + +
Sbjct: 167 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT-GKPPFYELGEPQAAMF 222
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH+E A+K+L +++ L + +H
Sbjct: 39 IKTLGTGSFGRVM------LVKHKETGNHYAMKILD-----------KQKVVKLKQIEHT 81
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 82 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 134
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 135 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 188
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 189 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 246
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 247 KV-RFPSHFSSDLKDLLR 263
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 83
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 129
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 130 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 184 SKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 125/302 (41%), Gaps = 54/302 (17%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPN 429
R L +G F V++A+ G E+ L ++L +E E +E C + + HPN
Sbjct: 34 RVLAEGGFAFVYEAQDVG--SGREYALK--RLLSNE--EEKNRAIIQEVCFMKKLSGHPN 87
Query: 430 IVKLLGVCAVGKPMC-------LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
IV+ ++GK LL + +G L +FL+ MES R
Sbjct: 88 IVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK-------------KMES---RG 131
Query: 483 PQLSTCDLITIALQIASGMVYLSDRK--FVHRDLATRNCLINDQMVVKIADFGLSRKM-Y 539
P LS ++ I Q + ++ +K +HRDL N L+++Q +K+ DFG + + +
Sbjct: 132 P-LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISH 190
Query: 540 LQDYYKGDENDAI----------PVRWMPLESILYNKYTV--ESDVWAFGVCLWEIFSFA 587
DY + A+ P+ P LY+ + + + D+WA G C+ + F
Sbjct: 191 YPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG-CILYLLCFR 249
Query: 588 LQPYYGLTHEEVVKY-IKEGNILQAPDNTP-DALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
P+ E+ K I G P +T + L++ + P R S + L
Sbjct: 250 QHPF-----EDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304
Query: 646 NI 647
I
Sbjct: 305 EI 306
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH+E A+K+L +++ L + +H
Sbjct: 47 IKTLGTGSFGRVM------LVKHKETGNHYAMKILD-----------KQKVVKLKQIEHT 89
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 90 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 142
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 196
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 197 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 254
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 255 KV-RFPSHFSSDLKDLLR 271
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 31 IGEGAYGMVCSA-----YDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 84
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 85 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 120
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 31 IGEGAYGMVCSA-----YDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 84
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 85 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 120
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH 180
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 35 IGEGAYGMVCSA-----YDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 88
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 89 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 124
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLND 457
VA+K + E + + +E +++ HPNIV V + L+ + + G + D
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 458 FLR-ICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516
++ I + + +G L + TI ++ G+ YL +HRD+
Sbjct: 98 IIKHIVAKGEHKSGV-------------LDESTIATILREVLEGLEYLHKNGQIHRDVKA 144
Query: 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVR--------WMPLESI-LYNKY 567
N L+ + V+IADFG+S + G + VR WM E + Y
Sbjct: 145 GNILLGEDGSVQIADFGVSAFL-----ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY 199
Query: 568 TVESDVWAFGVCLWEIFSFALQPYY 592
++D+W+FG+ E+ + A PY+
Sbjct: 200 DFKADIWSFGITAIELATGA-APYH 223
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 121/294 (41%), Gaps = 47/294 (15%)
Query: 341 PCNASYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAV 400
P S+ Q A L ++ + PR+ + +G+G+ G V A LVAV
Sbjct: 51 PQRVSHEQFRAALQLVVDPGD-PRSYLDNFIKIGEGSTGIVCIATV-----RSSGKLVAV 104
Query: 401 KMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLR 460
K + + + F E ++ ++ H N+V++ VG + ++ E++ G L D +
Sbjct: 105 KKMDLRKQQRRELLFN-EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV- 162
Query: 461 ICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520
T++ M + + L + + L + +HRD+ + + L
Sbjct: 163 ----------THTRMNEE----------QIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 202
Query: 521 INDQMVVKIADFG----LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAF 576
+ VK++DFG +S+++ + G WM E I Y E D+W+
Sbjct: 203 LTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY------WMAPELISRLPYGPEVDIWSL 256
Query: 577 GVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMK 630
G+ + E+ PY+ + +K I+ DN P L +L K+ ++K
Sbjct: 257 GIMVIEMVD-GEPPYFNEPPLKAMKMIR--------DNLPPRLKNLHKVSPSLK 301
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 29/205 (14%)
Query: 398 VAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLND 457
VA+K + E + + +E +++ HPNIV V + L+ + + G + D
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 458 FLR-ICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516
++ I + + +G L + TI ++ G+ YL +HRD+
Sbjct: 103 IIKHIVAKGEHKSGV-------------LDESTIATILREVLEGLEYLHKNGQIHRDVKA 149
Query: 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVR--------WMPLESI-LYNKY 567
N L+ + V+IADFG+S + G + VR WM E + Y
Sbjct: 150 GNILLGEDGSVQIADFGVSAFL-----ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY 204
Query: 568 TVESDVWAFGVCLWEIFSFALQPYY 592
++D+W+FG+ E+ + A PY+
Sbjct: 205 DFKADIWSFGITAIELATGA-APYH 228
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 51 IGEGAYGMVCSA-----YDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 104
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 105 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 140
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 31 IGEGAYGMVCSA-----YDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 84
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 85 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 120
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 67
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 113
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 114 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 167
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 168 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 216
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 33 IGEGAYGMVCSA-----YDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLAFRHENII 86
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 87 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 122
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 90
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 91 MSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 136
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 137 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 190
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 191 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 239
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F V A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 82
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 128
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 129 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 182
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 183 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 231
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 35 IGEGAYGMVCSA-----YDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 88
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 89 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKCQH 124
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 105/282 (37%), Gaps = 32/282 (11%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
P+ +GQGA G V+ A + +E + + + + E + E ++
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIIN----EILVM 71
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
E +PNIV L VG + ++ EY+ G L D + T + M+
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----------TETCMDEG---- 116
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+ + + + +L + +HRD+ + N L+ VK+ DFG ++ +
Sbjct: 117 ------QIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PE 169
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K P WM E + Y + D+W+ G+ E+ PY +
Sbjct: 170 QSKRSTMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYL 227
Query: 603 IKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
I LQ P+ D + C +M R S + + Q
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 33 IGEGAYGMVCSA-----YDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 86
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 87 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 122
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 31 IGEGAYGMVCSA-----YDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 84
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 85 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 120
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 31/242 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
N+ Y++ LG+G FG+V + KA G + V + KDE + L E +L
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-----ENRVL 202
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + +S + +
Sbjct: 203 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFSEDRARFY-- 253
Query: 483 PQLSTCDLITIALQIASGMVYL-SDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
+I S + YL S++ V+RDL N +++ +KI DFGL ++ ++
Sbjct: 254 -----------GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IK 301
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601
D P P E + N Y D W GV ++E+ L P+Y HE++ +
Sbjct: 302 DGATMKTFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHEKLFE 359
Query: 602 YI 603
I
Sbjct: 360 LI 361
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 39 IGEGAYGMVCSA-----YDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 92
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ ND +R + + YI ME+ ++++
Sbjct: 93 GI----------------------NDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 128
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 129 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 189 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 31 IGEGAYGMVCSA-----YDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 84
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ ND +R + + YI ME+ ++++
Sbjct: 85 GI----------------------NDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 120
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 121 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 29 IGEGAYGMVCSA-----YDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 82
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 83 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 118
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 119 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 47 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 89
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 90 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 142
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 196
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 197 WTLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 254
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 255 KV-RFPSHFSSDLKDLLR 271
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L E +H
Sbjct: 46 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKEIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYAPG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N +I+ Q +++ DFGL++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 36 IGEGAYGMVCSA-----YDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 89
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 90 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 125
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 126 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 186 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 29 IGEGAYGMVCSA-----YDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 82
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 83 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 118
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 119 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 37 IGEGAYGMVCSA-----YDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 90
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 91 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 126
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 127 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 187 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 28 IGEGAYGMVCSA-----YDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 81
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 82 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 117
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 118 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 178 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 40/260 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKML-KDEASEYLQTDFE-REACLLAEFD 426
++ LG G+FGRV L+KH E A+K+L K + + Q + E +L +
Sbjct: 46 IKTLGTGSFGRVM------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
P +VKL + ++ EY+ G+ M S + R+ + S
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE--------------------MFSHLRRIGRFS 139
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KG 193
Query: 547 DEND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
P P E IL Y D WA GV ++E+ + P++ ++ + I
Sbjct: 194 RTWXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIV 251
Query: 605 EGNILQAPDNTPDALYDLMK 624
G + + P + L DL++
Sbjct: 252 SGKV-RFPSHFSSDLKDLLR 270
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 35 IGEGAYGMVCSA-----YDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 88
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 89 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 124
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 44/225 (19%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD---EASEYLQTDFEREACLLAEFDHPN 429
+G+GA+G V A ++ V V + K E Y Q RE +L F H N
Sbjct: 35 IGEGAYGMVCSA-------YDNLNKVRVAIRKISPFEHQTYCQRTL-REIKILLRFRHEN 86
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV--- 482
I+ +ND +R + + YI ME+ ++++
Sbjct: 87 II----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKT 122
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R
Sbjct: 123 QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182
Query: 543 YYKGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
+ G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 40/260 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKML-KDEASEYLQTDFE-REACLLAEFD 426
++ LG G+FGRV L+KH+E A+K+L K + + Q + E +L +
Sbjct: 47 IKTLGTGSFGRVM------LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
P +VKL + ++ EY G++ LR R+ + S
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR--------------------RIGRFS 140
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
A QI YL ++RDL N +I+ Q +K+ DFG ++++ KG
Sbjct: 141 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV------KG 194
Query: 547 DEND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
P P E IL Y D WA GV ++E+ + P++ ++ + I
Sbjct: 195 RTWXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIV 252
Query: 605 EGNILQAPDNTPDALYDLMK 624
G + + P + L DL++
Sbjct: 253 SGKV-RFPSHFSSDLKDLLR 271
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + +
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFAEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 195
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 196 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 35 IGEGAYGMVCSA-----YDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 88
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 89 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 124
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 185 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 36 IGEGAYGMVCSA-----YDNLNKVRVAIKKISPFEHQTYCQRTL-REIKILLRFRHENII 89
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 90 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 125
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 126 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 186 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIV 431
+G+GA+G V A + VA+K + E Y Q RE +L F H NI+
Sbjct: 33 IGEGAYGMVCSA-----YDNVNKVRVAIKKISPFEHQTYCQRTL-REIKILLAFRHENII 86
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS----PNNYINGTYSSMESSIHRV---PQ 484
+ND +R + + YI ME+ ++++
Sbjct: 87 ----------------------GINDIIRAPTIEQMKDVYI--VQDLMETDLYKLLKTQH 122
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
LS + QI G+ Y+ +HRDL N L+N +KI DFGL+R +
Sbjct: 123 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 545 KGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFS 585
G + + RW I+ N YT D+W+ G L E+ S
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 31/242 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
N+ Y++ LG+G FG+V + KA G + V + KDE + L E +L
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-----ENRVL 205
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + +S + +
Sbjct: 206 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFSEDRARFY-- 256
Query: 483 PQLSTCDLITIALQIASGMVYL-SDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
+I S + YL S++ V+RDL N +++ +KI DFGL ++ ++
Sbjct: 257 -----------GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IK 304
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601
D P P E + N Y D W GV ++E+ L P+Y HE++ +
Sbjct: 305 DGATMKTFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHEKLFE 362
Query: 602 YI 603
I
Sbjct: 363 LI 364
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 195
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++++ + P++ ++ + I G
Sbjct: 196 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYQM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ A +H N
Sbjct: 12 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 47 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 89
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 90 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 142
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 196
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 197 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 254
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 255 KV-RFPSHFSSDLKDLLR 271
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 121/294 (41%), Gaps = 47/294 (15%)
Query: 341 PCNASYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAV 400
P S+ Q A L ++ + PR+ + +G+G+ G V A LVAV
Sbjct: 6 PQRVSHEQFRAALQLVVDPGD-PRSYLDNFIKIGEGSTGIVCIATV-----RSSGKLVAV 59
Query: 401 KMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLR 460
K + + + F E ++ ++ H N+V++ VG + ++ E++ G L D +
Sbjct: 60 KKMDLRKQQRRELLFN-EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV- 117
Query: 461 ICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520
T++ M + + L + + L + +HRD+ + + L
Sbjct: 118 ----------THTRMNEE----------QIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 157
Query: 521 INDQMVVKIADFG----LSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAF 576
+ VK++DFG +S+++ + G WM E I Y E D+W+
Sbjct: 158 LTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPY------WMAPELISRLPYGPEVDIWSL 211
Query: 577 GVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMK 630
G+ + E+ PY+ + +K I+ DN P L +L K+ ++K
Sbjct: 212 GIMVIEMVD-GEPPYFNEPPLKAMKMIR--------DNLPPRLKNLHKVSPSLK 256
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 32 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 74
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 75 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 127
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 128 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 181
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 182 WTLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 239
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 240 KV-RFPSHFSSDLKDLLR 256
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 104/282 (36%), Gaps = 32/282 (11%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
P+ +GQGA G V+ A + +E + + + + E + E ++
Sbjct: 18 PKKKYTRFEKIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIIN----EILVM 71
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
E +PNIV L VG + ++ EY+ G L D + T + M+
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----------TETCMDEG---- 116
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+ + + + +L + +HRD+ + N L+ VK+ DFG ++ +
Sbjct: 117 ------QIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PE 169
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K P WM E + Y + D+W+ G+ E+ PY +
Sbjct: 170 QSKRSXMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYL 227
Query: 603 IKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
I LQ P+ D + C M R S + + Q
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 120/298 (40%), Gaps = 55/298 (18%)
Query: 341 PCNASYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAV 400
P S+ Q A L ++ + PR+ + +G+G+ G V A LVAV
Sbjct: 8 PQRVSHEQFRAALQLVVDPGD-PRSYLDNFIKIGEGSTGIVCIATV-----RSSGKLVAV 61
Query: 401 KMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLR 460
K + + + F E ++ ++ H N+V++ VG + ++ E++ G L D +
Sbjct: 62 KKMDLRKQQRRELLFN-EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV- 119
Query: 461 ICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520
T++ M + + L + + L + +HRD+ + + L
Sbjct: 120 ----------THTRMNEE----------QIAAVCLAVLQALSVLHAQGVIHRDIKSDSIL 159
Query: 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVR--------WMPLESILYNKYTVESD 572
+ VK++DFG ++ + +P R WM E I Y E D
Sbjct: 160 LTHDGRVKLSDFGFCAQV----------SKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 573 VWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMK 630
+W+ G+ + E+ PY+ + +K I+ DN P L +L K+ ++K
Sbjct: 210 IWSLGIMVIEMVD-GEPPYFNEPPLKAMKMIR--------DNLPPRLKNLHKVSPSLK 258
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ + S
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFSEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 30/230 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK---MLKDEASEYLQTDFEREACL 421
D + + LG+G+F A+ L E+ + ++ ++K+ Y+ RE +
Sbjct: 30 EDFKFGKILGEGSFSTTVLARE--LATSREYAIKILEKRHIIKENKVPYVT----RERDV 83
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
++ DHP VKL + + Y G+L ++R G++
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-------GSFDE------- 129
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
TC A +I S + YL + +HRDL N L+N+ M ++I DFG ++ + +
Sbjct: 130 -----TCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+++ E + SD+WA G ++++ + L P+
Sbjct: 184 SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPF 232
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 37/231 (16%)
Query: 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ----TDFEREACL 421
D +R LG G+FGRV ++ +H A+K+LK E L+ T+ ER +
Sbjct: 7 DFQILRTLGTGSFGRVHLIRS----RHNG-RYYAMKVLKKEIVVRLKQVEHTNDER--LM 59
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
L+ HP I+++ G + + ++ +Y+ G+L LR R
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS-----------------QR 102
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
P A ++ + YL + ++RDL N L++ +KI DFG ++ +
Sbjct: 103 FPNPVAK---FYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY 592
Y D I E + Y D W+FG+ ++E+ + P+Y
Sbjct: 160 TYXLCGTPDYIAP-----EVVSTKPYNKSIDWWSFGILIYEMLA-GYTPFY 204
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 31/242 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
N+ Y++ LG+G FG+V + KA G + V + KDE + L E +L
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-----ENRVL 64
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + +S + +
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFSEDRARFY-- 115
Query: 483 PQLSTCDLITIALQIASGMVYL-SDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
+I S + YL S++ V+RDL N +++ +KI DFGL ++ ++
Sbjct: 116 -----------GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IK 163
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601
D P P E + N Y D W GV ++E+ L P+Y HE++ +
Sbjct: 164 DGATMKXFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHEKLFE 221
Query: 602 YI 603
I
Sbjct: 222 LI 223
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 33/268 (12%)
Query: 393 EEFTLVAVKMLKDEASEYLQT-DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMG 451
++F + V + K +S L T D +REA + HP+IV+LL + + ++FE+M
Sbjct: 52 QQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD 111
Query: 452 RGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVH 511
DL + + ++ YS +S + QI + Y D +H
Sbjct: 112 GADLCFEIVKRADAGFV---YSEAVASHY-------------MRQILEALRYCHDNNIIH 155
Query: 512 RDLATRNCLI---NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568
RD+ L+ + VK+ FG++ ++ G +M E + Y
Sbjct: 156 RDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGT--PHFMAPEVVKREPYG 213
Query: 569 VESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAP---DNTPDALYDLMKL 625
DVW GV L+ + S L P+YG T E + + I +G P + ++ DL++
Sbjct: 214 KPVDVWGCGVILFILLSGCL-PFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 271
Query: 626 CWNMKPMNRPSFRTIYQTL---WNIKRD 650
+ P R T+Y+ L W +RD
Sbjct: 272 MLMLDPAERI---TVYEALNHPWLKERD 296
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 104/282 (36%), Gaps = 32/282 (11%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
P+ +GQGA G V+ A + +E + + + + E + E ++
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIIN----EILVM 72
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
E +PNIV L VG + ++ EY+ G L D + T + M+
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----------TETCMDEG---- 117
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+ + + + +L + +HRD+ + N L+ VK+ DFG ++ +
Sbjct: 118 ------QIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT-PE 170
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K P WM E + Y + D+W+ G+ E+ PY +
Sbjct: 171 QSKRSXMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYL 228
Query: 603 IKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
I LQ P+ D + C M R S + + Q
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ +
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFXEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 195
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 196 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ +
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFXEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 31/242 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
N+ Y++ LG+G FG+V + KA G + V + KDE + L E +L
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-----ENRVL 63
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + +S + +
Sbjct: 64 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFSEDRARFY-- 114
Query: 483 PQLSTCDLITIALQIASGMVYL-SDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
+I S + YL S++ V+RDL N +++ +KI DFGL ++ ++
Sbjct: 115 -----------GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IK 162
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601
D P P E + N Y D W GV ++E+ L P+Y HE++ +
Sbjct: 163 DGATMKXFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHEKLFE 220
Query: 602 YI 603
I
Sbjct: 221 LI 222
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 31/242 (12%)
Query: 365 NDIIYVRDLGQGAFGRVF--QAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
N+ Y++ LG+G FG+V + KA G + V + KDE + L E +L
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT-----ENRVL 62
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HP + L +C + EY G+L F + +S + +
Sbjct: 63 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRER-----VFSEDRARFY-- 113
Query: 483 PQLSTCDLITIALQIASGMVYL-SDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
+I S + YL S++ V+RDL N +++ +KI DFGL ++ ++
Sbjct: 114 -----------GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG-IK 161
Query: 542 DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601
D P P E + N Y D W GV ++E+ L P+Y HE++ +
Sbjct: 162 DGATMKXFCGTPEYLAP-EVLEDNDYGRAVDWWGLGVVMYEMMCGRL-PFYNQDHEKLFE 219
Query: 602 YI 603
I
Sbjct: 220 LI 221
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ +
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFXEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 195
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 196 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 67 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 109
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ +
Sbjct: 110 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFXEP 162
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 163 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-- 220
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 221 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 276
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 277 -RFPSHFSSDLKDLLR 291
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKML-KDEASEYLQTDFE-REACLLAEFD 426
++ LG G+FGRV L+KH E A+K+L K + + Q + E +L +
Sbjct: 46 IKTLGTGSFGRVM------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
P +VKL + ++ EY G+ M S + R+ + S
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE--------------------MFSHLRRIGRFS 139
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
A QI YL ++RDL N +I+ Q +K+ DFG ++++ + +
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC 199
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 200 ----GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 40/260 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKML-KDEASEYLQTDFE-REACLLAEFD 426
++ LG G+FGRV L+KH+E A+K+L K + + Q + E +L +
Sbjct: 46 IKTLGTGSFGRVM------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
P +VKL + ++ EY+ G+ M S + R+ + S
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE--------------------MFSHLRRIGRFS 139
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
A QI YL ++RDL N +I+ Q +++ DFG ++++ KG
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV------KG 193
Query: 547 DEND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
P P E I+ Y D WA GV ++E+ + P++ ++ + I
Sbjct: 194 RTWXLCGTPEYLAP-EIIISKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIV 251
Query: 605 EGNILQAPDNTPDALYDLMK 624
G + + P + L DL++
Sbjct: 252 SGKV-RFPSHFSSDLKDLLR 270
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 33/268 (12%)
Query: 393 EEFTLVAVKMLKDEASEYLQT-DFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMG 451
++F + V + K +S L T D +REA + HP+IV+LL + + ++FE+M
Sbjct: 50 QQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD 109
Query: 452 RGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVH 511
DL + + ++ YS +S + QI + Y D +H
Sbjct: 110 GADLCFEIVKRADAGFV---YSEAVASHY-------------MRQILEALRYCHDNNIIH 153
Query: 512 RDLATRNCLI---NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568
RD+ L+ + VK+ FG++ ++ G +M E + Y
Sbjct: 154 RDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGT--PHFMAPEVVKREPYG 211
Query: 569 VESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAP---DNTPDALYDLMKL 625
DVW GV L+ + S L P+YG T E + + I +G P + ++ DL++
Sbjct: 212 KPVDVWGCGVILFILLSGCL-PFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 269
Query: 626 CWNMKPMNRPSFRTIYQTL---WNIKRD 650
+ P R T+Y+ L W +RD
Sbjct: 270 MLMLDPAERI---TVYEALNHPWLKERD 294
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHP 428
++ LG G+FGRV L+KH K+ + Y +++ + L + +H
Sbjct: 41 IKTLGTGSFGRVM------LVKH-----------KESGNHYAMKILDKQKVVKLKQIEHT 83
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ +
Sbjct: 84 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVAG--GEMFSHLRRIGRFXEP 136
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 137 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 190
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 191 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 248
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 249 KV-RFPSHFSSDLKDLLR 265
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH+E A+K+L +++ L + +H
Sbjct: 39 IKTLGTGSFGRVM------LVKHKETGNHYAMKILD-----------KQKVVKLKQIEHT 81
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ +
Sbjct: 82 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFXEP 134
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 135 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 188
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 189 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 246
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 247 KV-RFPSHFSSDLKDLLR 263
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 111/276 (40%), Gaps = 54/276 (19%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
PR+ + +G+G+ G V A LVAVK + + + F E ++
Sbjct: 18 PRSYLDNFIKIGEGSTGIVCIATV-----RSSGKLVAVKKMDLRKQQRRELLFN-EVVIM 71
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
++ H N+V++ VG + ++ E++ G L D + T++ M
Sbjct: 72 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----------THTRMNEE---- 116
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+ + L + + L + +HRD+ + + L+ VK++DFG ++
Sbjct: 117 ------QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---- 166
Query: 543 YYKGDENDAIPVR--------WMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594
+ +P R WM E I Y E D+W+ G+ + E+ PY+
Sbjct: 167 ------SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPYFNE 219
Query: 595 THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMK 630
+ +K I+ DN P L +L K+ ++K
Sbjct: 220 PPLKAMKMIR--------DNLPPRLKNLHKVSPSLK 247
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 42/229 (18%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+ +G GA+G V A+ L ++ + + D + +T RE +L F H N
Sbjct: 60 IETIGNGAYGVVSSARR--RLTGQQVAIKKIPNAFDVVTNAKRT--LRELKILKHFKHDN 115
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY---SSMESSIHRVPQLS 486
I+ + D LR P Y MES +H++ S
Sbjct: 116 IIAI----------------------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS 153
Query: 487 ---TCDLITIAL-QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM---- 538
T + + L Q+ G+ Y+ + +HRDL N L+N+ +KI DFG++R +
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 213
Query: 539 YLQDYYKGDENDAIPVRW--MPLESILYNKYTVESDVWAFGVCLWEIFS 585
Y+ + + RW P + ++YT D+W+ G E+ +
Sbjct: 214 AEHQYFM---TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 40/260 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEF-TLVAVKML-KDEASEYLQTDFE-REACLLAEFD 426
++ LG G+FGRV L+KH+E A+K+L K + + Q + E +L +
Sbjct: 46 IKTLGTGSFGRVM------LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
P +VKL + ++ EY+ G+ M S + R+ + S
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGE--------------------MFSHLRRIGRFS 139
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KG 193
Query: 547 DEND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
P P IL Y D WA GV ++E+ + P++ ++ + I
Sbjct: 194 RTWXLCGTPEYLAP-AIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIV 251
Query: 605 EGNILQAPDNTPDALYDLMK 624
G + + P + L DL++
Sbjct: 252 SGKV-RFPSHFSSDLKDLLR 270
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 11 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 12 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 111/276 (40%), Gaps = 54/276 (19%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
PR+ + +G+G+ G V A LVAVK + + + F E ++
Sbjct: 22 PRSYLDNFIKIGEGSTGIVCIATV-----RSSGKLVAVKKMDLRKQQRRELLFN-EVVIM 75
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
++ H N+V++ VG + ++ E++ G L D + T++ M
Sbjct: 76 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----------THTRMNEE---- 120
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+ + L + + L + +HRD+ + + L+ VK++DFG ++
Sbjct: 121 ------QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV---- 170
Query: 543 YYKGDENDAIPVR--------WMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594
+ +P R WM E I Y E D+W+ G+ + E+ PY+
Sbjct: 171 ------SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPYFNE 223
Query: 595 THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMK 630
+ +K I+ DN P L +L K+ ++K
Sbjct: 224 PPLKAMKMIR--------DNLPPRLKNLHKVSPSLK 251
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 35 IGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 125
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE 183
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 184 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 12 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+ + +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 550 DAIPVRWMPLESILYNKYTVES-DVWAFGVCLWEIFSFAL 588
+ ++ E + ++ E DVW+ G+ L + + L
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 12 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+ + +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 550 DAIPVRWMPLESILYNKYTVES-DVWAFGVCLWEIFSFAL 588
+ ++ E + ++ E DVW+ G+ L + + L
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 12 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+ + +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 550 DAIPVRWMPLESILYNKYTVES-DVWAFGVCLWEIFSFAL 588
+ ++ E + ++ E DVW+ G+ L + + L
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 12 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+ + +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 550 DAIPVRWMPLESILYNKYTVES-DVWAFGVCLWEIFSFAL 588
+ ++ E + ++ E DVW+ G+ L + + L
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 10 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 104
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+ + +
Sbjct: 105 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164
Query: 550 DAIPVRWMPLESILYNKYTVES-DVWAFGVCLWEIFSFAL 588
+ ++ E + ++ E DVW+ G+ L + + L
Sbjct: 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 204
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 35 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 125
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE 183
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 184 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---------------------XQ 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 11 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+ + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 550 DAIPVRWMPLESILYNKYTVES-DVWAFGVCLWEIFSFAL 588
+ ++ E + ++ E DVW+ G+ L + + L
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 11 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+ + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 550 DAIPVRWMPLESILYNKYTVES-DVWAFGVCLWEIFSFAL 588
+ ++ E + ++ E DVW+ G+ L + + L
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 41 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 131
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDE 189
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 190 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 11 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 11 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 11 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 42/229 (18%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+ +G GA+G V A+ L ++ + + D + +T RE +L F H N
Sbjct: 59 IETIGNGAYGVVSSARR--RLTGQQVAIKKIPNAFDVVTNAKRT--LRELKILKHFKHDN 114
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY---SSMESSIHRVPQLS 486
I+ + D LR P Y MES +H++ S
Sbjct: 115 IIAI----------------------KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS 152
Query: 487 ---TCDLITIAL-QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM---- 538
T + + L Q+ G+ Y+ + +HRDL N L+N+ +KI DFG++R +
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212
Query: 539 YLQDYYKGDENDAIPVRW--MPLESILYNKYTVESDVWAFGVCLWEIFS 585
Y+ + + RW P + ++YT D+W+ G E+ +
Sbjct: 213 AEHQYFM---TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 11 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 11 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG+GAF V + K GL EF + K A ++ + EREA + + HPN
Sbjct: 36 ELGKGAFSVVRRCVHKTTGL----EFAAKIINTKKLSARDFQK--LEREARICRKLQHPN 89
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+L L+F+ + G+L F I + Y S D
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFY------------------SEAD 129
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MVVKIADFGLSRKMYLQDYYKG 546
QI + Y VHR+L N L+ + VK+ADFGL+ ++ + + G
Sbjct: 130 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 189
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
A ++ E + + Y+ D+WA GV L+ I P++ + IK G
Sbjct: 190 ---FAGTPGYLSPEVLKKDPYSKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 245
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 11 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 12 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 47 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 89
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P E+ + + N ++ + Y G M S + R+ + S
Sbjct: 90 LNEKRI-LQAVNFPFLTKLEFSFKDNSNLYMVM----EYAPG--GEMFSHLRRIGRFSEP 142
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N +I+ Q +K+ DFG ++++ + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-- 200
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 201 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 256
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 257 -RFPSHFSSDLKDLLR 271
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 47 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 89
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P E+ + + N ++ + Y G M S + R+ + S
Sbjct: 90 LNEKRI-LQAVNFPFLTKLEFSFKDNSNLYMVM----EYAPG--GEMFSHLRRIGRFSEP 142
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N +I+ Q +K+ DFG ++++ + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-- 200
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 201 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 256
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 257 -RFPSHFSSDLKDLLR 271
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 118/303 (38%), Gaps = 60/303 (19%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LGQGAFG+V KA L + + ++ +++ S L E LLA +H +V+
Sbjct: 14 LGQGAFGQV--VKARNALDSRYYAIKKIRHTEEKLSTILS-----EVMLLASLNHQYVVR 66
Query: 433 LLG-----------VCAVGKPMCLLF--EYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+ AV K L EY L D + + N + +
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR------ 120
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
+ QI + Y+ + +HRDL N I++ VKI DFGL++ ++
Sbjct: 121 -------------LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 540 LQ-DYYKGDEND----------AIPVRWMPLESIL--YNKYTVESDVWAFGVCLWE-IFS 585
D K D + AI +L Y + D+++ G+ +E I+
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227
Query: 586 FALQPYYGLTHEEVVKYIKEGNILQAP---DNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
F+ G+ ++K ++ +I P DN +++L + P RP RT+
Sbjct: 228 FST----GMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
Query: 643 TLW 645
+ W
Sbjct: 284 SGW 286
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 32 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 122
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDE 180
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 181 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 36 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 126
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDE 184
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 185 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ +
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFXEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ KG
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV------KGRT 195
Query: 549 ND--AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 196 WXLCGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 88/225 (39%), Gaps = 48/225 (21%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 37 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 127
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------- 180
Query: 544 YKGDENDA-IPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ DE + RW I+ N Y D+W+ G + E+ +
Sbjct: 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 36 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 126
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 184
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 185 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 47 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 89
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ +
Sbjct: 90 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFXEP 142
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-- 200
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 201 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 256
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 257 -RFPSHFSSDLKDLLR 271
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 88/225 (39%), Gaps = 48/225 (21%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 37 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 127
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------- 180
Query: 544 YKGDENDA-IPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ DE + RW I+ N Y D+W+ G + E+ +
Sbjct: 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 46 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 88
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P + E+ + + N ++ + Y+ G M S + R+ +
Sbjct: 89 LNEKRI-LQAVNFPFLVKLEFSFKDNSNLYMVM----EYVPG--GEMFSHLRRIGRFXEP 141
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N LI+ Q +++ DFG ++++ + +
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-- 199
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 200 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 255
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 256 -RFPSHFSSDLKDLLR 270
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 42 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 132
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 190
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 191 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 88/225 (39%), Gaps = 48/225 (21%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 37 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 127
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------- 180
Query: 544 YKGDENDA-IPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ DE + RW I+ N Y D+W+ G + E+ +
Sbjct: 181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 496 QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVR 555
Q G+ YL + + +HRDL N +ND M VKI DFGL+ K+ K D
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGT--PN 207
Query: 556 WMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNT 615
++ E + ++ E D+W+ G L+ + P+ +E IK+ N P +
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKETYIRIKK-NEYSVPRHI 265
Query: 616 PDALYDLMKLCWNMKPMNRPS 636
L++ + P RPS
Sbjct: 266 NPVASALIRRMLHADPTLRPS 286
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG+GAF V + K GL EF + K A ++ + EREA + + HPN
Sbjct: 13 ELGKGAFSVVRRCVHKTTGL----EFAAKIINTKKLSARDFQK--LEREARICRKLQHPN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+L L+F+ + G+L F I + Y S D
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFY------------------SEAD 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MVVKIADFGLSRKMYLQDYYKG 546
QI + Y VHR+L N L+ + VK+ADFGL+ ++ + + G
Sbjct: 107 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 166
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
A ++ E + + Y+ D+WA GV L+ I P++ + IK G
Sbjct: 167 ---FAGTPGYLSPEVLKKDPYSKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 222
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKML-KDEASEYLQTDFE-REACLLAEFD 426
++ LG G+FGRV L+KH E A+K+L K + + Q + E +L +
Sbjct: 46 IKTLGTGSFGRVM------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
P +VKL + ++ EY G+ M S + R+ + S
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE--------------------MFSHLRRIGRFS 139
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
A QI YL ++RDL N +I+ Q +++ DFG ++++ + +
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC 199
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 200 ----GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG+GAF V + K GL EF + K A ++ + EREA + + HPN
Sbjct: 12 ELGKGAFSVVRRCVHKTTGL----EFAAKIINTKKLSARDFQK--LEREARICRKLQHPN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+L L+F+ + G+L F I + Y S D
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFY------------------SEAD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MVVKIADFGLSRKMYLQDYYKG 546
QI + Y VHR+L N L+ + VK+ADFGL+ ++ + + G
Sbjct: 106 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 165
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
A ++ E + + Y+ D+WA GV L+ I P++ + IK G
Sbjct: 166 ---FAGTPGYLSPEVLKKDPYSKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 89/227 (39%), Gaps = 41/227 (18%)
Query: 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+LG+GA V++ K G K A+K+LK + + E +L HPNI+
Sbjct: 60 ELGRGATSIVYRCKQKGTQKP-----YALKVLKKTVDKKI---VRTEIGVLLRLSHPNII 111
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
KL + + L+ E + G+L D RI Y S D
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFD--RIVEKGYY------------------SERDAA 151
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLIND---QMVVKIADFGLSRKMYLQDYYK--- 545
QI + YL + VHRDL N L +KIADFGLS+ + Q K
Sbjct: 152 DAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC 211
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY 592
G P E + Y E D+W+ G+ + I +P+Y
Sbjct: 212 GTPGYCAP------EILRGCAYGPEVDMWSVGIITY-ILLCGFEPFY 251
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 372 DLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG+GAF V + K GL EF + K A ++ + EREA + + HPN
Sbjct: 13 ELGKGAFSVVRRCVHKTTGL----EFAAKIINTKKLSARDFQK--LEREARICRKLQHPN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
IV+L L+F+ + G+L F I + Y S D
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFY------------------SEAD 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MVVKIADFGLSRKMYLQDYYKG 546
QI + Y VHR+L N L+ + VK+ADFGL+ ++ + + G
Sbjct: 107 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 166
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
A ++ E + + Y+ D+WA GV L+ I P++ + IK G
Sbjct: 167 ---FAGTPGYLSPEVLKKDPYSKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 32 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 122
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 180
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 181 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 496 QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVR 555
Q G+ YL + + +HRDL N +ND M VKI DFGL+ K+ K D
Sbjct: 134 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGT--PN 191
Query: 556 WMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNT 615
++ E + ++ E D+W+ G L+ + P+ +E IK+ N P +
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKETYIRIKK-NEYSVPRHI 249
Query: 616 PDALYDLMKLCWNMKPMNRPS 636
L++ + P RPS
Sbjct: 250 NPVASALIRRMLHADPTLRPS 270
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 32 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 122
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 180
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 181 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 126/327 (38%), Gaps = 72/327 (22%)
Query: 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD 426
+ V +G+G +G V++ L H E V + +DE S + +T+ L
Sbjct: 10 VALVECVGKGRYGEVWRG-----LWHGESVAVKIFSSRDEQSWFRETEIYNTVLL----R 60
Query: 427 HPNIVKLLGVCAVGK----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
H NI+ + + + L+ Y G L DFL+ ++E
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQ-----------RQTLE------ 103
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKF--------VHRDLATRNCLINDQMVVKIADFGL 534
P L+ + +A+ A G+ +L F HRD +RN L+ + IAD GL
Sbjct: 104 PHLA----LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGL 159
Query: 535 SRKMYLQ--DYYKGDENDAIPVRWMPLESILYNKYTVE-------SDVWAFGVCLWEIFS 585
+ M+ Q DY N + + +L + + +D+WAFG+ LWEI
Sbjct: 160 A-VMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIAR 218
Query: 586 FAL---------QPYYGL-----THEEVVKYI----KEGNILQ--APDNTPDALYDLMKL 625
+ P+Y + + E++ K + + I A D L +M+
Sbjct: 219 RTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRE 278
Query: 626 CWNMKPMNRPSFRTIYQTLWNIKRDLE 652
CW P R + I +TL I E
Sbjct: 279 CWYPNPSARLTALRIKKTLQKISNSPE 305
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 104/282 (36%), Gaps = 32/282 (11%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
P+ +GQGA G V+ A + +E + + + + E + E ++
Sbjct: 19 PKKKYTRFEKIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIIN----EILVM 72
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
E +PNIV L VG + ++ EY+ G L D + T + M+
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-----------TETCMDEG---- 117
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
+ + + + +L + +HR++ + N L+ VK+ DFG ++ +
Sbjct: 118 ------QIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQIT-PE 170
Query: 543 YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602
K P WM E + Y + D+W+ G+ E+ PY +
Sbjct: 171 QSKRSTMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYL 228
Query: 603 IKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
I LQ P+ D + C M R S + + Q
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 50 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C +L+
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ--------------------KLT 143
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D G
Sbjct: 144 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXG 201
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 202 ----XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 32 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 122
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 123 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 180
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 181 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 41 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 131
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 132 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 189
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 190 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 76
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 77 R------------LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 122
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 177
Query: 548 EN-DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N I R+ +++ YT DVW+ G L E+
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 42 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 132
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 190
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 191 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 42 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 132
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 133 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 190
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 191 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 53 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 143
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 201
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 202 MXG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 37 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 127
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 128 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 185
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 186 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 28 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 118
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 119 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 176
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 177 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3E6P|L Chain L, Crystal Structure Of Human Meizothrombin Desf1
Length = 158
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSP 246
C+ RG+ YQG + T GL C W + + A + + EN+CRN G+E
Sbjct: 8 CVPDRGQQYQGRLAVTTHGLPCLAWASAQAKALSKHQDFNSAVQLVENFCRNPDGDEEGV 67
Query: 247 WCYTMDPNVRWQRCEIPTCADSMQDD 272
WCY + C++ C ++++++
Sbjct: 68 WCYVAGKPGDFGYCDLNYCEEAVEEE 93
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 36 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 126
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 127 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 184
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 185 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 49 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 139
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 140 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 197
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 198 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 26 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 116
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 174
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 175 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 35 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 125
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 183
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 184 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 29 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 119
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 120 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 177
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 178 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 26 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C+ +L+
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CA--------------------KLT 119
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D G
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTG 177
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 178 ----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 27 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 117
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 175
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 176 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 35 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 125
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 126 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 183
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 184 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 107/258 (41%), Gaps = 36/258 (13%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKML-KDEASEYLQTDFE-REACLLAEFD 426
++ LG G+FGRV L+KH E A+K+L K + + Q + E +L +
Sbjct: 46 IKTLGTGSFGRVM------LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
P +VKL + ++ EY G+ M S + R+ +
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGE--------------------MFSHLRRIGRFX 139
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
A QI YL ++RDL N +I+ Q +K+ DFG ++++ + +
Sbjct: 140 EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC 199
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E IL Y D WA GV ++E+ + P++ ++ + I G
Sbjct: 200 ----GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSG 253
Query: 607 NILQAPDNTPDALYDLMK 624
+ + P + L DL++
Sbjct: 254 KV-RFPSHFSSDLKDLLR 270
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 50 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 140
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 198
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 199 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 27 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 117
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 118 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 175
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 176 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---------------------XQ 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 53 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 143
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 144 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 201
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 202 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|3K65|A Chain A, Crystal Structure Of Prethombin-2FRAGMENT-2 Complex
Length = 116
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSP 246
C+ RG+ YQG + T GL C W + + A + + EN+CRN G+E
Sbjct: 15 CVPDRGQQYQGRLAVTTHGLPCLAWASAQAKALSKHQDFNSAVQLVENFCRNPDGDEEGV 74
Query: 247 WCYTMDPNVRWQRCEIPTCADSMQDD 272
WCY + C++ C ++++++
Sbjct: 75 WCYVAGKPGDFGYCDLNYCEEAVEEE 100
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 36 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C +L+
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ--------------------KLT 129
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D G
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTG 187
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 188 ----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 496 QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK----GDENDA 551
Q G+ YL + + +HRDL N +ND M VKI DFGL+ K+ K G N
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYI 209
Query: 552 IPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQA 611
P E + ++ E D+W+ G L+ + P+ +E IK+ N
Sbjct: 210 AP------EVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKETYIRIKK-NEYSV 261
Query: 612 PDNTPDALYDLMKLCWNMKPMNRPS 636
P + L++ + P RPS
Sbjct: 262 PRHINPVASALIRRMLHADPTLRPS 286
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 496 QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK----GDENDA 551
Q G+ YL + + +HRDL N +ND M VKI DFGL+ K+ K G N
Sbjct: 150 QTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYI 209
Query: 552 IPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQA 611
P E + ++ E D+W+ G L+ + P+ +E IK+ N
Sbjct: 210 AP------EVLCKKGHSFEVDIWSLGCILYTLL-VGKPPFETSCLKETYIRIKK-NEYSV 261
Query: 612 PDNTPDALYDLMKLCWNMKPMNRPS 636
P + L++ + P RPS
Sbjct: 262 PRHINPVASALIRRMLHADPTLRPS 286
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 89/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V + K+ GL +AVK L + RE LL H
Sbjct: 59 VGSGAYGSVCSSYDVKS-GLK-------IAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + L ++ DLN+ ++ C
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 149
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D
Sbjct: 150 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 207
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y + D+W+ G + E+ +
Sbjct: 208 MTG----YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+ +A + RE ++ + DH NIV
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQGKAFK------NRELQIMRKLDHCNIV 76
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 77 R------------LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQ--TLPVI 122
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 177
Query: 548 EN-DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N I R+ +++ YT DVW+ G L E+
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 49 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 103
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C +L+
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ--------------------KLT 142
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D G
Sbjct: 143 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTG 200
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 201 ----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 47/301 (15%)
Query: 367 IIYVRDLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLA 423
I+ ++LG+G F V Q +K+ G +E+ A K LK + + + E +L
Sbjct: 31 ILTSKELGRGKFAVVRQCISKSTG----QEY---AAKFLKKRRRGQDCRAEILHEIAVLE 83
Query: 424 EFDH-PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
P ++ L V + L+ EY G++ +C P
Sbjct: 84 LAKSCPRVINLHEVYENTSEIILILEYAAGGEI---FSLCLP---------------ELA 125
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV---VKIADFGLSRKM- 538
+S D+I + QI G+ YL VH DL +N L++ +KI DFG+SRK+
Sbjct: 126 EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG 185
Query: 539 ---YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595
L++ E ++ E + Y+ T +D+W G+ + + + P+ G
Sbjct: 186 HACELREIMGTPE-------YLAPEILNYDPITTATDMWNIGIIAYMLLTHT-SPFVGED 237
Query: 596 HEEVVKYIKEGNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652
++E I + N+ + + + D ++ P RP+ W + D E
Sbjct: 238 NQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFE 297
Query: 653 N 653
N
Sbjct: 298 N 298
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 50 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C +L+
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ--------------------KLT 143
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D G
Sbjct: 144 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTG 201
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 202 ----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 30 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C +L+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ--------------------KLT 123
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D G
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTG 181
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 182 ----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 40 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 94
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C +L+
Sbjct: 95 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ--------------------KLT 133
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D G
Sbjct: 134 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTG 191
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 192 ----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 26 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C +L+
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ--------------------KLT 119
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D G
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTG 177
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 178 ----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 26 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C +L+
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ--------------------KLT 119
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D G
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAG 177
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 178 ----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 98/252 (38%), Gaps = 27/252 (10%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE 416
LE+ +N R LG+G FG V + K + K +K E + +
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN-- 233
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
E +L + + +V L +CL+ M GDL + Y G E
Sbjct: 234 -EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI-------YHMGQAGFPE 285
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+ + A +I G+ L + V+RDL N L++D ++I+D GL+
Sbjct: 286 ARA-----------VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF---SFALQPYYG 593
+ KG V +M E + +YT D WA G L+E+ S Q
Sbjct: 335 HVPEGQTIKGRVGT---VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
Query: 594 LTHEEVVKYIKE 605
+ EEV + +KE
Sbjct: 392 IKREEVERLVKE 403
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 30 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C +L+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ--------------------KLT 123
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D G
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAG 181
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 182 ----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 86/221 (38%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 30 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C +L+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ--------------------KLT 123
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DFGL+R + D G
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAG 181
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 182 ----FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 36/221 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+R +G GA+G V A L + VAVK L + RE LL H
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQK-----VAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 79
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME-SSIHRVPQLST 487
N++ LL V + + DF + Y+ T + ++I + LS
Sbjct: 80 NVIGLLDV------------FTPATSIEDFSEV-----YLVTTLMGADLNNIVKCQALSD 122
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGD 547
+ + Q+ G+ Y+ +HRDL N +N+ ++I DFGL+R + D
Sbjct: 123 EHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR--------QAD 174
Query: 548 E--NDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIF 584
E + RW I+ N Y D+W+ G + E+
Sbjct: 175 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 36/221 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+R +G GA+G V A L + VAVK L + RE LL H
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQK-----VAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME-SSIHRVPQLST 487
N++ LL V + + DF + Y+ T + ++I + LS
Sbjct: 88 NVIGLLDV------------FTPATSIEDFSEV-----YLVTTLMGADLNNIVKCQALSD 130
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGD 547
+ + Q+ G+ Y+ +HRDL N +N+ ++I DFGL+R + D
Sbjct: 131 EHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR--------QAD 182
Query: 548 E--NDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIF 584
E + RW I+ N Y D+W+ G + E+
Sbjct: 183 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 76
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 77 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 122
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 177
Query: 548 EN-DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N I R+ +++ YT DVW+ G L E+
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 98/237 (41%), Gaps = 35/237 (14%)
Query: 372 DLGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG GAFG V + +A G +F + + K+ + +QT ++ HP
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT--------MSVLRHPT 215
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+V L M +++E+M G+L F ++ +N ++S +
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGEL--FEKVADEHN-----------------KMSEDE 256
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV--VKIADFGLSRKMYLQDYYKGD 547
+ Q+ G+ ++ + +VH DL N + + +K+ DFGL+ + + K
Sbjct: 257 AVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT 316
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
A E YT D+W+ GV + + S L P+ G +E ++ +K
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYT---DMWSVGVLSYILLS-GLSPFGGENDDETLRNVK 369
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 29 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 77
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 78 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 123
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 124 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 178
Query: 548 EN-DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N I R+ +++ YT DVW+ G L E+
Sbjct: 179 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 36/221 (16%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+R +G GA+G V A L + VAVK L + RE LL H
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQK-----VAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME-SSIHRVPQLST 487
N++ LL V + + DF + Y+ T + ++I + LS
Sbjct: 88 NVIGLLDV------------FTPATSIEDFSEV-----YLVTTLMGADLNNIVKSQALSD 130
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGD 547
+ + Q+ G+ Y+ +HRDL N +N+ ++I DFGL+R + D
Sbjct: 131 EHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR--------QAD 182
Query: 548 E--NDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIF 584
E + RW I+ N Y D+W+ G + E+
Sbjct: 183 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 108/271 (39%), Gaps = 41/271 (15%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG GAF V A+ K L AVK + +A + ++ E E +L + H NIV
Sbjct: 30 LGTGAFSEVVLAEEKATGK-----LFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLIT 492
L + + L+ + + G+L F RI G Y+ ++S T
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGEL--FDRIVE-----KGFYTEKDAS-------------T 124
Query: 493 IALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ Q+ + YL VHRDL N L +++ + I+DFGLS+ KGD
Sbjct: 125 LIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKME-----GKGDVM 179
Query: 550 D---AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
P P E + Y+ D W+ GV + I P+Y ++ + I +
Sbjct: 180 STACGTPGYVAP-EVLAQKPYSKAVDCWSIGVIAY-ILLCGYPPFYDENDSKLFEQILKA 237
Query: 607 NI-LQAP--DNTPDALYDLMKLCWNMKPMNR 634
+P D+ D+ D ++ P R
Sbjct: 238 EYEFDSPYWDDISDSAKDFIRNLMEKDPNKR 268
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 86/225 (38%), Gaps = 48/225 (21%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK----------------------S 119
Query: 484 QLSTCDLITIAL-QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQD 542
Q T D + + QI G+ Y+ +HRDL N +N+ +KI DFGL R + D
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDD 177
Query: 543 YYKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 178 EMTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 76
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 77 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 122
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 177
Query: 548 EN-DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N I R+ +++ YT DVW+ G L E+
Sbjct: 178 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 47 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 95
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 96 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 141
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 142 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 196
Query: 548 EN-DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N I R+ +++ YT DVW+ G L E+
Sbjct: 197 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 62 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 110
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 111 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 156
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 211
Query: 548 EN-DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N I R+ +++ YT DVW+ G L E+
Sbjct: 212 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 98/238 (41%), Gaps = 50/238 (21%)
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKP----MCLLFEYMGRGDLNDFLRICSPNNYINGTY 472
+E +L + DHPN+VKL+ V + P + ++FE + +G
Sbjct: 85 QEIAILKKLDHPNVVKLVEV--LDDPNEDHLYMVFELVNQG------------------- 123
Query: 473 SSMESSIHRVPQLS--TCDLITIALQ-IASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
+ VP L + D Q + G+ YL +K +HRD+ N L+ + +KI
Sbjct: 124 -----PVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKI 178
Query: 530 ADFGLSRKMYLQDYYKGDE----NDAIPVRWMPLESILYNKYTVES---DVWAFGVCLWE 582
ADFG+S + +KG + N +M ES+ + DVWA GV L+
Sbjct: 179 ADFGVSNE------FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY- 231
Query: 583 IFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640
F F P+ + IK L+ PD PD DL L M N P R +
Sbjct: 232 CFVFGQCPFMDERIMCLHSKIK-SQALEFPDQ-PDIAEDLKDLITRMLDKN-PESRIV 286
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 98/237 (41%), Gaps = 35/237 (14%)
Query: 372 DLGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
+LG GAFG V + +A G +F + + K+ + +QT ++ HP
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT--------MSVLRHPT 109
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+V L M +++E+M G+L F ++ +N ++S +
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGEL--FEKVADEHN-----------------KMSEDE 150
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV--VKIADFGLSRKMYLQDYYKGD 547
+ Q+ G+ ++ + +VH DL N + + +K+ DFGL+ + + K
Sbjct: 151 AVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT 210
Query: 548 ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
A E YT D+W+ GV + + S L P+ G +E ++ +K
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYT---DMWSVGVLSYILLS-GLSPFGGENDDETLRNVK 263
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 40 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 88
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 89 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 134
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 189
Query: 548 EN-DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N I R+ +++ YT DVW+ G L E+
Sbjct: 190 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 32 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 80
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 81 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 126
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 127 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 181
Query: 548 EN-DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N I R+ +++ YT DVW+ G L E+
Sbjct: 182 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 98/252 (38%), Gaps = 27/252 (10%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE 416
LE+ +N R LG+G FG V + K + K +K E + +
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN-- 233
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
E +L + + +V L +CL+ M GDL + Y G E
Sbjct: 234 -EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI-------YHMGQAGFPE 285
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+ + A +I G+ L + V+RDL N L++D ++I+D GL+
Sbjct: 286 ARA-----------VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF---SFALQPYYG 593
+ KG V +M E + +YT D WA G L+E+ S Q
Sbjct: 335 HVPEGQTIKGRVGT---VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
Query: 594 LTHEEVVKYIKE 605
+ EEV + +KE
Sbjct: 392 IKREEVERLVKE 403
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 36 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 84
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 85 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 130
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 131 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 185
Query: 548 EN-DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N I R+ +++ YT DVW+ G L E+
Sbjct: 186 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 32/256 (12%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKH-EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428
++ LG G+FGRV L+KH E A+K+L +++ L + +H
Sbjct: 47 IKTLGTGSFGRVM------LVKHMETGNHYAMKILD-----------KQKVVKLKQIEHT 89
Query: 429 NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488
K + + AV P E+ + + N ++ + Y G M S + R+ +
Sbjct: 90 LNEKRI-LQAVNFPFLTKLEFSFKDNSNLYMVM----EYAPG--GEMFSHLRRIGRFXEP 142
Query: 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
A QI YL ++RDL N +I+ Q +K+ DFG ++++ + +
Sbjct: 143 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-- 200
Query: 549 NDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608
P P E IL Y D WA GV ++E+ + P++ ++ + I G +
Sbjct: 201 --GTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM-AAGYPPFFADQPIQIYEKIVSGKV 256
Query: 609 LQAPDNTPDALYDLMK 624
+ P + L DL++
Sbjct: 257 -RFPSHFSSDLKDLLR 271
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 56 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 104
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 105 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 150
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 151 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 205
Query: 548 ENDA-IPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N + I R+ +++ YT DVW+ G L E+
Sbjct: 206 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 26/220 (11%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA G V A + VAVK++ + + + ++E C+ +H N
Sbjct: 11 VQTLGEGAAGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+ + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 550 DAIPVRWMPLESILYNKYTVES-DVWAFGVCLWEIFSFAL 588
+ ++ E + ++ E DVW+ G+ L + + L
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 33 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 81
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 82 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 127
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 128 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 182
Query: 548 ENDA-IPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N + I R+ +++ YT DVW+ G L E+
Sbjct: 183 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 40 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 88
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 89 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 134
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 135 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 189
Query: 548 EN-DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N I R+ +++ YT DVW+ G L E+
Sbjct: 190 PNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 64 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 112
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 113 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 158
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 159 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 213
Query: 548 ENDA-IPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N + I R+ +++ YT DVW+ G L E+
Sbjct: 214 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 76
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 77 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 122
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 177
Query: 548 ENDA-IPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N + I R+ +++ YT DVW+ G L E+
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 62 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 110
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 111 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 156
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 157 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 211
Query: 548 ENDA-IPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N + I R+ +++ YT DVW+ G L E+
Sbjct: 212 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 100/238 (42%), Gaps = 52/238 (21%)
Query: 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD 426
I V+ +G+G +G V+ K G E V V +EAS + +T+ + +
Sbjct: 39 IQMVKQIGKGRYGEVWMGKWRG-----EKVAVKVFFTTEEASWFRETEIYQTVLM----R 89
Query: 427 HPNIVKLLGVCAVGK----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
H NI+ + G + L+ +Y G L D+L+ +
Sbjct: 90 HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT------------------- 130
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKF--------VHRDLATRNCLINDQMVVKIADFGL 534
L ++ +A SG+ +L F HRDL ++N L+ IAD GL
Sbjct: 131 --LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188
Query: 535 SRKMYLQDYYKGD--ENDAIPV-RWMPL----ESILYNKYT--VESDVWAFGVCLWEI 583
+ K ++ D + D N + R+MP ES+ N + + +D+++FG+ LWE+
Sbjct: 189 AVK-FISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 107 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 155
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 156 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 201
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 202 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 256
Query: 548 ENDA-IPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N + I R+ +++ YT DVW+ G L E+
Sbjct: 257 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 66 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 114
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 115 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 160
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 161 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 215
Query: 548 ENDA-IPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N + I R+ +++ YT DVW+ G L E+
Sbjct: 216 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|2HPP|P Chain P, Structures Of The Noncovalent Complexes Of Human And
Bovine Prothrombin Fragment 2 With Human Ppack-Thrombin
Length = 79
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%)
Query: 187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSP 246
C+ RGR Y+G + T G C W +++ A + P + +EN+CRN G+E
Sbjct: 1 CVPDRGREYRGRLAVTTSGSRCLAWSSEQAKALSKDQDFNPAVPLAENFCRNPDGDEEGA 60
Query: 247 WCYTMDPNVRWQRCEIPTC 265
WCY D ++ C + C
Sbjct: 61 WCYVADQPGDFEYCNLNYC 79
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+D+ + RE ++ + DH NIV
Sbjct: 41 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQDKRFK------NRELQIMRKLDHCNIV 89
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 90 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 135
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 136 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 190
Query: 548 ENDA-IPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N + I R+ +++ YT DVW+ G L E+
Sbjct: 191 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 88/224 (39%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI D+GL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+ +A + RE ++ + DH NIV
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQGKAFK------NRELQIMRKLDHCNIV 76
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 77 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 122
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 177
Query: 548 ENDA-IPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N + I R+ +++ YT DVW+ G L E+
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 50/239 (20%)
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
HPNIVKL V L+ E + G+L F RI ++ S E+S
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGEL--FERIKKKKHF-----SETEASY------- 110
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRKMYLQDY 543
I ++ S + ++ D VHRDL N L ND + +KI DFG +R
Sbjct: 111 ------IMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR------- 157
Query: 544 YKGDENDAIP-----VRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE- 597
K +N + + + E + N Y D+W+ GV L+ + S + P+ +H+
Sbjct: 158 LKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQV-PFQ--SHDR 214
Query: 598 --------EVVKYIKEGNIL---QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
E++K IK+G+ +A N DL++ + P R + W
Sbjct: 215 SLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEW 273
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAV-KMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+G G+FG V+QAK L E LVA+ K+L+ +A + RE ++ + DH NIV
Sbjct: 28 IGNGSFGVVYQAK---LCDSGE--LVAIKKVLQGKAFK------NRELQIMRKLDHCNIV 76
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+ L + + G+ D + + +Y+ T + R Q T +I
Sbjct: 77 R------------LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVI 122
Query: 492 TIAL---QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGD 547
+ L Q+ + Y+ HRD+ +N L++ D V+K+ DFG ++++ +G+
Sbjct: 123 YVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-----VRGE 177
Query: 548 ENDA-IPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
N + I R+ +++ YT DVW+ G L E+
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 116/307 (37%), Gaps = 53/307 (17%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE 416
L++ + P + +G+G FG+V+ + H E + + + +D + F+
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRW-----HGEVAIRLIDIERDNEDQL--KAFK 77
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
RE + H N+V +G C + ++ L +R +N T
Sbjct: 78 REVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQ--- 134
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL-- 534
IA +I GM YL + +H+DL ++N ++ VV I DFGL
Sbjct: 135 ----------------IAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVV-ITDFGLFS 177
Query: 535 ----------SRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
K+ +Q+ + I + P ++ SDV+A G +E+
Sbjct: 178 ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH 237
Query: 585 S----FALQPYYGLTHEEVVKYIKEG---NILQAPDNTPDALYDLMKLCWNMKPMNRPSF 637
+ F QP E ++ + G N+ Q + D++ CW + RP+F
Sbjct: 238 AREWPFKTQPA-----EAIIWQMGTGMKPNLSQI--GMGKEISDILLFCWAFEQEERPTF 290
Query: 638 RTIYQTL 644
+ L
Sbjct: 291 TKLMDML 297
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 86/221 (38%), Gaps = 33/221 (14%)
Query: 371 RDL---GQGAFGRVFQAKAPGLLKHEEFTLVAVKML-KDEASEYLQTDFEREACLLAEFD 426
RDL G GA+G V A + VA+K L + SE RE LL
Sbjct: 28 RDLQPVGSGAYGAVCSA-----VDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR 82
Query: 427 HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
H N++ LL V + + D DF + G E +L
Sbjct: 83 HENVIGLLDVFTPDETL---------DDFTDFYLVMPFMGTDLGKLMKHE-------KLG 126
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + Q+ G+ Y+ +HRDL N +N+ +KI DFGL+R+
Sbjct: 127 EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA------DS 180
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ + RW ++ N +YT D+W+ G + E+ +
Sbjct: 181 EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG G FG V + + + VA+K + E S + + E ++ + +HPN+V
Sbjct: 23 LGTGGFGYVLR-----WIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 433 L------LGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
L A L EY GDL +L N E I
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL------NQFENCCGLKEGPIR------ 125
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN---DQMVVKIADFGLSRKMYLQDY 543
T+ I+S + YL + + +HRDL N ++ +++ KI D G ++++ D
Sbjct: 126 -----TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQ 177
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+ ++++ E + KYTV D W+FG +E + +P+
Sbjct: 178 GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT-GFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG G FG V + + + VA+K + E S + + E ++ + +HPN+V
Sbjct: 22 LGTGGFGYVLR-----WIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 433 L------LGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
L A L EY GDL +L N E I
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL------NQFENCCGLKEGPIR------ 124
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN---DQMVVKIADFGLSRKMYLQDY 543
T+ I+S + YL + + +HRDL N ++ +++ KI D G ++++ D
Sbjct: 125 -----TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQ 176
Query: 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591
+ ++++ E + KYTV D W+FG +E + +P+
Sbjct: 177 GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT-GFRPF 223
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 114/303 (37%), Gaps = 60/303 (19%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LGQGAFG+V KA L + + ++ +++ S L E LLA +H +V+
Sbjct: 14 LGQGAFGQV--VKARNALDSRYYAIKKIRHTEEKLSTILS-----EVXLLASLNHQYVVR 66
Query: 433 LLGV-----------CAVGKPMCLLF--EYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
AV K L EY L D + + N + +
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR--- 123
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
QI + Y+ + +HR+L N I++ VKI DFGL++ ++
Sbjct: 124 ----------------QILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVH 167
Query: 540 LQ-DYYKGDEND----------AIPVRWMPLESIL--YNKYTVESDVWAFGVCLWE-IFS 585
D K D + AI +L Y + D ++ G+ +E I+
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYP 227
Query: 586 FALQPYYGLTHEEVVKYIKEGNILQAP---DNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
F+ G ++K ++ +I P DN +++L + P RP RT+
Sbjct: 228 FST----GXERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLN 283
Query: 643 TLW 645
+ W
Sbjct: 284 SGW 286
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 94/226 (41%), Gaps = 44/226 (19%)
Query: 369 YVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD------FEREACLL 422
++R LG+G+FG+V A+ E L AVK+LK + LQ D E+ L
Sbjct: 27 FIRVLGKGSFGKVMLARV-----KETGDLYAVKVLKKDV--ILQDDDVECTMTEKRILSL 79
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLF--EYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
A +HP + +L C P L F E++ GDL I
Sbjct: 80 AR-NHPFLTQLF--CCFQTPDRLFFVMEFVNGGDLM--------------------FHIQ 116
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYL 540
+ + A +I S +++L D+ ++RDL N L++ + K+ADFG+ ++
Sbjct: 117 KSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176
Query: 541 QDYYKGDENDAIPVRWMP--LESILYNKYTVESDVWAFGVCLWEIF 584
P P L+ +LY D WA GV L+E+
Sbjct: 177 NGVTTATFC-GTPDYIAPEILQEMLYGPAV---DWWAMGVLLYEML 218
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 35/239 (14%)
Query: 370 VRDLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH 427
+ +LG GAFG V + KA G + +F + K + E ++ + H
Sbjct: 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK--------YTVKNEISIMNQLHH 107
Query: 428 PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487
P ++ L M L+ E++ G+L F RI + + ++S
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGEL--FDRIAAEDY-----------------KMSE 148
Query: 488 CDLITIALQIASGMVYLSDRKFVHRDLATRN--CLINDQMVVKIADFGLSRKMYLQDYYK 545
++I Q G+ ++ + VH D+ N C VKI DFGL+ K+ + K
Sbjct: 149 AEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK 208
Query: 546 GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
A + E + +D+WA GV + + S L P+ G E ++ +K
Sbjct: 209 VTTATA---EFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGEDDLETLQNVK 263
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E + +H N
Sbjct: 11 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E + +H N
Sbjct: 12 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 66
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429
V+ LG+GA+G V A + VAVK++ + + + ++E + +H N
Sbjct: 11 VQTLGEGAYGEVQLA-----VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN 65
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+VK G G L EY G+L + +E I + D
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----------------FDRIEPDI----GMPEPD 105
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
Q+ +G+VYL HRD+ N L++++ +KI+DFGL+
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 91/229 (39%), Gaps = 47/229 (20%)
Query: 373 LGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
LG+GA+G V A K G +VA+K ++ RE +L F H NI
Sbjct: 19 LGEGAYGVVCSATHKPTG-------EIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV--PQLSTC 488
+ + + +P +F N + M++ +HRV Q+ +
Sbjct: 72 ITIFNI---QRP----------DSFENF-------NEVYIIQELMQTDLHRVISTQMLSD 111
Query: 489 DLITIAL-QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGD 547
D I + Q + L +HRDL N LIN +K+ DFGL+R + D D
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR---IIDESAAD 168
Query: 548 EN----------DAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIF 584
+ + + RW ++ KY+ DVW+ G L E+F
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI FGL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 97/258 (37%), Gaps = 39/258 (15%)
Query: 398 VAVKMLK-DEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV--GKPMCLLFEYMGRGD 454
+ VK+LK + S DF E L F HPN++ +LG C L+ + G
Sbjct: 36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGS 95
Query: 455 LNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRK--FVHR 512
L + L GT ++ S + AL A G +L +
Sbjct: 96 LYNVLH--------EGTNFVVDQS----------QAVKFALDXARGXAFLHTLEPLIPRH 137
Query: 513 DLATRNCLINDQMVVKI--ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTV- 569
L +R+ I++ +I AD S + + Y W+ E++
Sbjct: 138 ALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPA---------WVAPEALQKKPEDTN 188
Query: 570 --ESDVWAFGVCLWEIFSFALQPYYGLTHEEV-VKYIKEGNILQAPDNTPDALYDLMKLC 626
+D W+F V LWE+ + + P+ L++ E+ K EG P + L K+C
Sbjct: 189 RRSADXWSFAVLLWELVTREV-PFADLSNXEIGXKVALEGLRPTIPPGISPHVSKLXKIC 247
Query: 627 WNMKPMNRPSFRTIYQTL 644
N P RP F I L
Sbjct: 248 XNEDPAKRPKFDXIVPIL 265
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 91/229 (39%), Gaps = 47/229 (20%)
Query: 373 LGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
LG+GA+G V A K G +VA+K ++ RE +L F H NI
Sbjct: 19 LGEGAYGVVCSATHKPTG-------EIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV--PQLSTC 488
+ + + +P +F N + M++ +HRV Q+ +
Sbjct: 72 ITIFNI---QRP----------DSFENF-------NEVYIIQELMQTDLHRVISTQMLSD 111
Query: 489 DLITIAL-QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGD 547
D I + Q + L +HRDL N LIN +K+ DFGL+R + D D
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR---IIDESAAD 168
Query: 548 ENDA----------IPVRWMPLESILYN--KYTVESDVWAFGVCLWEIF 584
++ + RW ++ KY+ DVW+ G L E+F
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 108/274 (39%), Gaps = 54/274 (19%)
Query: 394 EFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRG 453
E+ + + K + SE ++ LL HPNI+ L V GK + L+ E M G
Sbjct: 54 EYAVKVIDKSKRDPSEEIE-------ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGG 106
Query: 454 DLND-FLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHR 512
+L D LR +S E+S + I + YL + VHR
Sbjct: 107 ELLDKILR--------QKFFSEREASF-------------VLHTIGKTVEYLHSQGVVHR 145
Query: 513 DLATRNCLINDQM----VVKIADFGLSRKMYLQDYYKGDENDAI-----PVRWMPLESIL 563
DL N L D+ ++I DFG ++++ EN + ++ E +
Sbjct: 146 DLKPSNILYVDESGNPECLRICDFGFAKQLRA-------ENGLLMTPCYTANFVAPEVLK 198
Query: 564 YNKYTVESDVWAFGVCLWEIFS----FALQPYYGLTHEEVVKYIKEGNILQAPDN---TP 616
Y D+W+ G+ L+ + + FA P T EE++ I G + N
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGP--SDTPEEILTRIGSGKFTLSGGNWNTVS 256
Query: 617 DALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
+ DL+ ++ P R + + + Q W ++D
Sbjct: 257 ETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKD 290
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 45/296 (15%)
Query: 368 IYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH 427
++++ LG+G F V GL H+ ++L E + + + +REA + F+H
Sbjct: 32 LFIQKLGEGGFSYV--DLVEGL--HDGHFYALKRILCHEQQD--REEAQREADMHRLFNH 85
Query: 428 PNIVKLLGVC----AVGKPMCLLFEYMGRGDL-NDFLRICSPNNYINGTYSSMESSIHRV 482
PNI++L+ C LL + RG L N+ R+ N+
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF--------------- 130
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL-------- 534
L+ ++ + L I G+ + + + HRDL N L+ D+ + D G
Sbjct: 131 --LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188
Query: 535 --SRK-MYLQDYYKGDENDAIPVRWMPLESILYNKYTVE-SDVWAFGVCLWEIFSFALQP 590
SR+ + LQD+ + I R L S+ + E +DVW+ G L+ + F P
Sbjct: 189 EGSRQALTLQDW--AAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM-FGEGP 245
Query: 591 YYGLTHEEVVKYIKEGNILQAPDN--TPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644
Y + + + N L P + AL+ L+ + P RP + L
Sbjct: 246 YDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301
>pdb|3NXP|A Chain A, Crystal Structure Of Human Prethrombin-1
Length = 424
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%)
Query: 187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSP 246
C+ RG+ YQG + T GL C W + + A + + EN+CRN G+E
Sbjct: 15 CVPDRGQQYQGRLAVTTHGLPCLAWASAQAKALSKHQDFNSAVQLVENFCRNPDGDEEGV 74
Query: 247 WCYTMDPNVRWQRCEIPTCADSMQDDV 273
WCY + C++ C ++++++
Sbjct: 75 WCYVAGKPGDFGYCDLNYCEEAVEEET 101
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 91/229 (39%), Gaps = 47/229 (20%)
Query: 373 LGQGAFGRVFQA--KAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
LG+GA+G V A K G +VA+K ++ RE +L F H NI
Sbjct: 19 LGEGAYGVVCSATHKPTG-------EIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV--PQLSTC 488
+ + + +P +F N + M++ +HRV Q+ +
Sbjct: 72 ITIFNI---QRP----------DSFENF-------NEVYIIQELMQTDLHRVISTQMLSD 111
Query: 489 DLITIAL-QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGD 547
D I + Q + L +HRDL N LIN +K+ DFGL+R + D D
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR---IIDESAAD 168
Query: 548 ENDA----------IPVRWMPLESILYN--KYTVESDVWAFGVCLWEIF 584
++ + RW ++ KY+ DVW+ G L E+F
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 118/289 (40%), Gaps = 43/289 (14%)
Query: 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+LG+GAF V + +L +E+ + K A ++ + EREA + HPNIV
Sbjct: 29 ELGKGAFSVV--RRCVKVLAGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHPNIV 84
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+L + L+F+ + G+L F I + Y S D
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYY------------------SEADAS 124
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQM---VVKIADFGLSRKMYLQDYYKGDE 548
QI +++ VHRDL N L+ ++ VK+ADFGL+ ++ +G++
Sbjct: 125 HCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV------EGEQ 178
Query: 549 ND----AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
A ++ E + + Y D+WA GV L+ I P++ + + IK
Sbjct: 179 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILY-ILLVGYPPFWDEDQHRLYQQIK 237
Query: 605 EGNI-LQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
G +P+ TP+A DL+ + P R + + W R
Sbjct: 238 AGAYDFPSPEWDTVTPEA-KDLINKMLTINPSKRITAAEALKHPWISHR 285
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 99/252 (39%), Gaps = 47/252 (18%)
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLND-FLRICSPNNYINGTYSS 474
E LL HPNI+ L V GK + L+ E M G+L D LR +S
Sbjct: 69 EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR--------QKFFSE 120
Query: 475 MESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM----VVKIA 530
E+S + I + YL + VHRDL N L D+ ++I
Sbjct: 121 REASF-------------VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRIC 167
Query: 531 DFGLSRKMYLQDYYKGDENDAI-----PVRWMPLESILYNKYTVESDVWAFGVCLWEIFS 585
DFG ++++ EN + ++ E + Y D+W+ G+ L+ + +
Sbjct: 168 DFGFAKQLRA-------ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
Query: 586 ----FALQPYYGLTHEEVVKYIKEGNILQAPDN---TPDALYDLMKLCWNMKPMNRPSFR 638
FA P T EE++ I G + N + DL+ ++ P R + +
Sbjct: 221 GYTPFANGP--SDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAK 278
Query: 639 TIYQTLWNIKRD 650
+ Q W ++D
Sbjct: 279 QVLQHPWVTQKD 290
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 100/256 (39%), Gaps = 46/256 (17%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA----SEYLQTDFEREAC 420
+D +++ +G+G+FG+V A+ K EE AVK+L+ +A E ER
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARH----KAEE-VFYAVKVLQKKAILKKKEEKHIMSERN-V 91
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
LL HP +V L + + +Y+ G+L L
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL--------------------- 130
Query: 481 RVPQLSTCDLIT----IALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
Q C L A +IAS + YL V+RDL N L++ Q + + DFGL +
Sbjct: 131 ---QRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK 187
Query: 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+ ++ ++ E + Y D W G L+E+ + L P+Y
Sbjct: 188 ENI--EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML-YGLPPFYSRNT 244
Query: 597 EEVVKYIKEGNILQAP 612
E+ NIL P
Sbjct: 245 AEMYD-----NILNKP 255
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI D GL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 97/232 (41%), Gaps = 51/232 (21%)
Query: 374 GQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKL 433
+G FG V++A+ LL VAVK+ + + Q ++E + L H NI++
Sbjct: 33 ARGRFGCVWKAQ---LLNE----YVAVKIFPIQDKQSWQNEYEVYS--LPGMKHENILQF 83
Query: 434 LGV----CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
+G +V + L+ + +G L+DFL+ +S +
Sbjct: 84 IGAEKRGTSVDVDLWLITAFHEKGSLSDFLK---------------------ANVVSWNE 122
Query: 490 LITIALQIASGMVYLSDR----------KFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
L IA +A G+ YL + HRD+ ++N L+ + + IADFGL+ K +
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK-F 181
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVES------DVWAFGVCLWEIFS 585
GD + + R +L + D++A G+ LWE+ S
Sbjct: 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI D GL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 46/224 (20%)
Query: 373 LGQGAFGRV---FQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHP 428
+G GA+G V F K GL VAVK L + RE LL H
Sbjct: 30 VGSGAYGSVCAAFDTKT-GLR-------VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 429 NIVKLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP 483
N++ LL V + + L ++ DLN+ ++ C
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ-------------------- 120
Query: 484 QLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543
+L+ + + QI G+ Y+ +HRDL N +N+ +KI D GL+R + D
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDE 178
Query: 544 YKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
G + RW I+ N Y D+W+ G + E+ +
Sbjct: 179 MTG----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Query: 496 QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAI--P 553
QI G YL + +HRDL N +N+ + VKI DFGL+ K+ Y G+ +
Sbjct: 129 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKTLCGT 184
Query: 554 VRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPD 613
++ E + ++ E DVW+ G C+ P+ +E IK+ N P
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKK-NEYSIPK 242
Query: 614 NTPDALYDLMKLCWNMKPMNRPSF 637
+ L++ P RP+
Sbjct: 243 HINPVAASLIQKMLQTDPTARPTI 266
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Query: 496 QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAI--P 553
QI G YL + +HRDL N +N+ + VKI DFGL+ K+ Y G+ +
Sbjct: 149 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKVLCGT 204
Query: 554 VRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPD 613
++ E + ++ E DVW+ G C+ P+ +E IK+ N P
Sbjct: 205 PNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKK-NEYSIPK 262
Query: 614 NTPDALYDLMKLCWNMKPMNRPSF 637
+ L++ P RP+
Sbjct: 263 HINPVAASLIQKMLQTDPTARPTI 286
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 496 QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAI--P 553
QI G YL + +HRDL N +N+ + VKI DFGL+ K+ Y G+ +
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKTLCGT 180
Query: 554 VRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPD 613
++ E + ++ E DVW+ G C+ P+ +E IK+ N P
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKK-NEYSIPK 238
Query: 614 NTPDALYDLMKLCWNMKPMNRPS 636
+ L++ P RP+
Sbjct: 239 HINPVAASLIQKMLQTDPTARPT 261
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 496 QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAI--P 553
QI G YL + +HRDL N +N+ + VKI DFGL+ K+ Y G+ +
Sbjct: 125 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKTLCGT 180
Query: 554 VRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPD 613
++ E + ++ E DVW+ G C+ P+ +E IK+ N P
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKK-NEYSIPK 238
Query: 614 NTPDALYDLMKLCWNMKPMNRPS 636
+ L++ P RP+
Sbjct: 239 HINPVAASLIQKMLQTDPTARPT 261
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 35/267 (13%)
Query: 356 KLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVA-VKMLKDEASEYLQTD 414
K+ L D V+ +G+GAFG V + K L++ +M+K S +
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF---- 115
Query: 415 FEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSS 474
F E ++A + P +V+L + + ++ EYM GDL + + +NY
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-----SNY------- 163
Query: 475 MESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+ + T +++ +AL M F+HRD+ N L++ +K+ADFG
Sbjct: 164 --DVPEKWARFYTAEVV-LALDAIHSM------GFIHRDVKPDNMLLDKSGHLKLADFGT 214
Query: 535 SRKMYLQDYYKGDENDAIPVRWMPLESILYNK-----YTVESDVWAFGVCLWEIFSFALQ 589
KM + + D P P +L ++ Y E D W+ GV L+E+
Sbjct: 215 CMKMNKEGMVRCDTAVGTPDYISP--EVLKSQGGDGYYGRECDWWSVGVFLYEML-VGDT 271
Query: 590 PYYGLTHEEVV-KYIKEGNILQAPDNT 615
P+Y + K + N L PD+
Sbjct: 272 PFYADSLVGTYSKIMNHKNSLTFPDDN 298
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 43/274 (15%)
Query: 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
+LG+GAF V + +L +E+ + + K A ++ + EREA + HPNIV
Sbjct: 18 ELGKGAFSVV--RRCVKVLAGQEYAAMIINTKKLSARDHQK--LEREARICRLLKHPNIV 73
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+L + L+F+ + G+L F I + Y S D
Sbjct: 74 RLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYY------------------SEADAS 113
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQM---VVKIADFGLSRKMYLQDYYKGDE 548
QI +++ VHR+L N L+ ++ VK+ADFGL+ ++ +G++
Sbjct: 114 HCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV------EGEQ 167
Query: 549 ND----AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
A ++ E + + Y D+WA GV L+ I P++ + + IK
Sbjct: 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILY-ILLVGYPPFWDEDQHRLYQQIK 226
Query: 605 EGNI-LQAPD---NTPDALYDLMKLCWNMKPMNR 634
G +P+ TP+A DL+ + P R
Sbjct: 227 AGAYDFPSPEWDTVTPEA-KDLINKMLTINPSKR 259
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Query: 496 QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAI--P 553
QI G YL + +HRDL N +N+ + VKI DFGL+ K+ Y G+ +
Sbjct: 147 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKVLCGT 202
Query: 554 VRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPD 613
++ E + ++ E DVW+ G C+ P+ +E IK+ N P
Sbjct: 203 PNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKK-NEYSIPK 260
Query: 614 NTPDALYDLMKLCWNMKPMNRPSF 637
+ L++ P RP+
Sbjct: 261 HINPVAASLIQKMLQTDPTARPTI 284
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 101/247 (40%), Gaps = 34/247 (13%)
Query: 365 NDIIYVRDLGQGAFGRVFQ--AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
+D +LG+GAF V + K P +E+ + K A ++ + EREA +
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPT----QEYAAKIINTKKLSARDHQK--LEREARIC 84
Query: 423 AEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRV 482
HPNIV+L + L+F+ + G+L F I + Y
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYY--------------- 127
Query: 483 PQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MVVKIADFGLSRKMY 539
S D QI + ++ VHRDL N L+ + VK+ADFGL+ +
Sbjct: 128 ---SEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IE 182
Query: 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599
+Q + A ++ E + + Y D+WA GV L+ I P++ ++
Sbjct: 183 VQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHKL 241
Query: 600 VKYIKEG 606
+ IK G
Sbjct: 242 YQQIKAG 248
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 33/266 (12%)
Query: 356 KLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVA-VKMLKDEASEYLQTD 414
K+ L D V+ +G+GAFG V + K L++ +M+K S +
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF---- 120
Query: 415 FEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSS 474
F E ++A + P +V+L + + ++ EYM GDL + + +NY
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-----SNY------- 168
Query: 475 MESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+ + T +++ +AL M F+HRD+ N L++ +K+ADFG
Sbjct: 169 --DVPEKWARFYTAEVV-LALDAIHSM------GFIHRDVKPDNMLLDKSGHLKLADFGT 219
Query: 535 SRKMYLQDYYKGDENDAIPVRWMPLESILYNK-----YTVESDVWAFGVCLWEIFSFALQ 589
KM + + D P P +L ++ Y E D W+ GV L+E+
Sbjct: 220 CMKMNKEGMVRCDTAVGTPDYISP--EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
Query: 590 PYYGLTHEEVVKYIKEGNILQAPDNT 615
Y K + N L PD+
Sbjct: 278 FYADSLVGTYSKIMNHKNSLTFPDDN 303
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 8/143 (5%)
Query: 496 QIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAI--P 553
QI G YL + +HRDL N +N+ + VKI DFGL+ K+ Y G+ +
Sbjct: 123 QIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV----EYDGERKKVLCGT 178
Query: 554 VRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPD 613
++ E + ++ E DVW+ G C+ P+ +E IK+ N P
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIG-CIMYTLLVGKPPFETSCLKETYLRIKK-NEYSIPK 236
Query: 614 NTPDALYDLMKLCWNMKPMNRPS 636
+ L++ P RP+
Sbjct: 237 HINPVAASLIQKMLQTDPTARPT 259
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 33/265 (12%)
Query: 356 KLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVA-VKMLKDEASEYLQTD 414
K+ L D V+ +G+GAFG V + K L++ +M+K S +
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF---- 120
Query: 415 FEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSS 474
F E ++A + P +V+L + + ++ EYM GDL + + +NY
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-----SNY------- 168
Query: 475 MESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+ + T +++ +AL M F+HRD+ N L++ +K+ADFG
Sbjct: 169 --DVPEKWARFYTAEVV-LALDAIHSM------GFIHRDVKPDNMLLDKSGHLKLADFGT 219
Query: 535 SRKMYLQDYYKGDENDAIPVRWMPLESILYNK-----YTVESDVWAFGVCLWEIFSFALQ 589
KM + + D P P +L ++ Y E D W+ GV L+E+
Sbjct: 220 CMKMNKEGMVRCDTAVGTPDYISP--EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
Query: 590 PYYGLTHEEVVKYIKEGNILQAPDN 614
Y K + N L PD+
Sbjct: 278 FYADSLVGTYSKIMNHKNSLTFPDD 302
>pdb|2HPQ|P Chain P, Structures Of The Noncovalent Complexes Of Human And
Bovine Prothrombin Fragment 2 With Human Ppack-thrombin
Length = 79
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSP 246
C+ RG+ YQG + T GL C W + + A + + EN+CRN G+E
Sbjct: 1 CVPDRGQQYQGRLAVTTHGLPCLAWASAQAKALSKHQDFNSAVQLVENFCRNPDGDEEGV 60
Query: 247 WCYTMDPNVRWQRCEIPTC 265
WCY + C++ C
Sbjct: 61 WCYVAGKPGDFGYCDLNYC 79
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 40/221 (18%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
+G GA+G V A + VAVK L + RE LL H N++
Sbjct: 30 VGSGAYGSVCAA-----FDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 432 KLLGVCAVGKPM-----CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486
LL V + + L ++ DLN+ ++ C +L+
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQ--------------------KLT 123
Query: 487 TCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG 546
+ + QI G+ Y+ +HRDL N +N+ +KI DF L+R + D G
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTG 181
Query: 547 DENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW I+ N Y D+W+ G + E+ +
Sbjct: 182 ----YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 109/287 (37%), Gaps = 61/287 (21%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-------SEYLQTDFEREACLLAEF 425
LG GAFG V+ A + E+ V VK +K E + E +L+
Sbjct: 32 LGSGAFGFVWTA-----VDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV 86
Query: 426 DHPNIVKLLGVCAVGKPMCLLFEYMGRG-DLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
+H NI+K+L + L+ E G G DL F I R P+
Sbjct: 87 EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAF--------------------IDRHPR 126
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFG----LSRKMYL 540
L I Q+ S + YL + +HRD+ N +I + +K+ DFG L R
Sbjct: 127 LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF 186
Query: 541 QDYYKGDENDAIPVRWMPLESILYNKYT-VESDVWAFGVCLW-------------EIFSF 586
+ + + E ++ N Y E ++W+ GV L+ E
Sbjct: 187 YTFCG-------TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEA 239
Query: 587 ALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMN 633
A+ P Y L +E++ + +LQ L L+ W +P+N
Sbjct: 240 AIHPPY-LVSKELMSLV--SGLLQPVPERRTTLEKLVTDPWVTQPVN 283
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 31/238 (13%)
Query: 405 DEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSP 464
+E E + + L HPNI++L L+F+ M +G+L D+L
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----- 115
Query: 465 NNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524
+ + + T ++ L++ + L+ VHRDL N L++D
Sbjct: 116 ------------TEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDD 160
Query: 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMP--LESILYNK---YTVESDVWAFGVC 579
M +K+ DFG S + L K E P P +E + + Y E D+W+ GV
Sbjct: 161 MNIKLTDFGFSCQ--LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 218
Query: 580 LWEIFSFALQPYYGLTHEEVVKYIKEGNI-LQAP--DNTPDALYDLMKLCWNMKPMNR 634
++ + + + P++ +++ I GN +P D+ D + DL+ ++P R
Sbjct: 219 MYTLLAGS-PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKR 275
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 31/238 (13%)
Query: 405 DEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSP 464
+E E + + L HPNI++L L+F+ M +G+L D+L
Sbjct: 48 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----- 102
Query: 465 NNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524
+ + + T ++ L++ + L+ VHRDL N L++D
Sbjct: 103 ------------TEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDD 147
Query: 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMP--LESILYNK---YTVESDVWAFGVC 579
M +K+ DFG S + L K E P P +E + + Y E D+W+ GV
Sbjct: 148 MNIKLTDFGFSCQ--LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 205
Query: 580 LWEIFSFALQPYYGLTHEEVVKYIKEGNI-LQAP--DNTPDALYDLMKLCWNMKPMNR 634
++ + + + P++ +++ I GN +P D+ D + DL+ ++P R
Sbjct: 206 MYTLLAGS-PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKR 262
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 11/157 (7%)
Query: 493 IALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDA 551
IA+ I + +L + +HRD+ N LIN VK+ DFG+S YL D D DA
Sbjct: 114 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG--YLVDDVAKD-IDA 170
Query: 552 IPVRWMPLESI---LYNK-YTVESDVWAFGVCLWEIFSFALQPY--YGLTHEEVVKYIKE 605
+M E I L K Y+V+SD+W+ G+ + E+ PY +G +++ + ++E
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF-PYDSWGTPFQQLKQVVEE 229
Query: 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
+ D D C RP++ + Q
Sbjct: 230 PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 490 LITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
L IA+ I + +L + +HRD+ N LIN VK+ DFG+S YL D
Sbjct: 155 LGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG--YLVDSV-AKT 211
Query: 549 NDAIPVRWMPLESI---LYNK-YTVESDVWAFGVCLWEIFSFALQPY--YGLTHEEVVKY 602
DA +M E I L K Y+V+SD+W+ G+ + E+ PY +G +++ +
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF-PYDSWGTPFQQLKQV 270
Query: 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
++E + D D C RP++ + Q
Sbjct: 271 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 35/218 (16%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKML-KDEASEYLQTDFEREACLLAEFDHPNIV 431
+G GA+G V A + VA+K L + SE RE LL H N++
Sbjct: 50 VGSGAYGSVCSA-----IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI 104
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP--QLSTCD 489
LL V + +++ Y+ + M++ + ++ + S
Sbjct: 105 GLLDVFTPASSLRNFYDF-----------------YLVMPF--MQTDLQKIMGMEFSEEK 145
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ + Q+ G+ Y+ VHRDL N +N+ +KI DFGL+R + +
Sbjct: 146 IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR------HADAEMT 199
Query: 550 DAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW ++ + Y D+W+ G + E+ +
Sbjct: 200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT 237
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 35/218 (16%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKML-KDEASEYLQTDFEREACLLAEFDHPNIV 431
+G GA+G V A + VA+K L + SE RE LL H N++
Sbjct: 32 VGSGAYGSVCSA-----IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI 86
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQL--STCD 489
LL V + +++ Y+ + M++ + ++ L S
Sbjct: 87 GLLDVFTPASSLRNFYDF-----------------YLVMPF--MQTDLQKIMGLKFSEEK 127
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ + Q+ G+ Y+ VHRDL N +N+ +KI DFGL+R + +
Sbjct: 128 IQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR------HADAEMT 181
Query: 550 DAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
+ RW ++ + Y D+W+ G + E+ +
Sbjct: 182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT 219
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 20/177 (11%)
Query: 417 REACLLAEFDHPNIVKLLGV--CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSS 474
RE LL E HPN++ L V + + LLF+Y DL ++ +
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHIIK-----------FHR 114
Query: 475 MESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI----NDQMVVKIA 530
+ + QL + ++ QI G+ YL +HRDL N L+ ++ VKIA
Sbjct: 115 ASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA 174
Query: 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFS 585
D G +R D + + W +L YT D+WA G E+ +
Sbjct: 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 490 LITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE 548
L IA+ I + +L + +HRD+ N LIN VK DFG+S YL D D
Sbjct: 138 LGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISG--YLVDDVAKDI 195
Query: 549 NDA-----IPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY--YGLTHEEVVK 601
+ P R P + Y+V+SD+W+ G+ E+ PY +G +++ +
Sbjct: 196 DAGCKPYXAPERINP--ELNQKGYSVKSDIWSLGITXIELAILRF-PYDSWGTPFQQLKQ 252
Query: 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642
++E + D D C RP++ + Q
Sbjct: 253 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 116/306 (37%), Gaps = 76/306 (24%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE----YLQTDFEREACLLAEFDHP 428
LG G V A+ L H + VAVK+L+ + + YL+ F REA A +HP
Sbjct: 20 LGFGGMSEVHLAR--DLRDHRD---VAVKVLRADLARDPSFYLR--FRREAQNAAALNHP 72
Query: 429 NIVKLLGVCAVGKPMC----LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
IV + P ++ EY+ L D + P
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-------------------- 112
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
++ I + + + +HRD+ N +I+ VK+ DFG++R +
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI------ 166
Query: 545 KGDENDAI--------PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
D +++ +++ E + SDV++ G L+E+ + P+ G +
Sbjct: 167 -ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSP 224
Query: 597 EEVV-KYIKEGNILQAPDNTPDALYD----------LMKLCWNMKPMNRPSFRTIYQTLW 645
+ V ++++E I P A ++ L L N P NR YQT
Sbjct: 225 DSVAYQHVREDPI------PPSARHEGLSADLDAVVLKALAKN--PENR------YQTAA 270
Query: 646 NIKRDL 651
++ DL
Sbjct: 271 EMRADL 276
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 99/238 (41%), Gaps = 31/238 (13%)
Query: 405 DEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSP 464
+E E + + L HPNI++L L+F+ M +G+L D+L
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----- 115
Query: 465 NNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524
+ + + T ++ L++ + L+ VHRDL N L++D
Sbjct: 116 ------------TEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDD 160
Query: 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMP--LESILYNK---YTVESDVWAFGVC 579
M +K+ DFG S + L K P P +E + + Y E D+W+ GV
Sbjct: 161 MNIKLTDFGFSCQ--LDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI 218
Query: 580 LWEIFSFALQPYYGLTHEEVVKYIKEGNI-LQAP--DNTPDALYDLMKLCWNMKPMNR 634
++ + + + P++ +++ I GN +P D+ D + DL+ ++P R
Sbjct: 219 MYTLLAGS-PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKR 275
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 115/289 (39%), Gaps = 43/289 (14%)
Query: 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV 431
D+G+GAF V + L E+ + K A ++ + EREA + H NIV
Sbjct: 11 DIGKGAFSVV--RRCVKLCTGHEYAAKIINTKKLSARDHQK--LEREARICRLLKHSNIV 66
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLI 491
+L + L+F+ + G+L F I + Y S D
Sbjct: 67 RLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYY------------------SEADAS 106
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MVVKIADFGLSRKMYLQDYYKGDE 548
QI +++ VHRDL N L+ + VK+ADFGL+ ++ +GD+
Sbjct: 107 HCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV------QGDQ 160
Query: 549 ND----AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604
A ++ E + Y D+WA GV L+ I P++ ++ + IK
Sbjct: 161 QAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILY-ILLVGYPPFWDEDQHKLYQQIK 219
Query: 605 EGNI-LQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
G +P+ TP+A +L+ + P R + + W +R
Sbjct: 220 AGAYDFPSPEWDTVTPEA-KNLINQMLTINPAKRITAHEALKHPWVCQR 267
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 117/290 (40%), Gaps = 45/290 (15%)
Query: 372 DLGQGAFGRVFQ-AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
+LG+GAF V + K P +E+ + K A ++ + EREA + HPNI
Sbjct: 11 ELGKGAFSVVRRCMKIP---TGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHPNI 65
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
V+L + L+F+ + G+L F I + Y S D
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYY------------------SEADA 105
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MVVKIADFGLSRKMYLQDYYKGD 547
QI + + VHRDL N L+ + VK+ADFGL+ ++ +GD
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV------QGD 159
Query: 548 END----AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ A ++ E + + Y D+WA GV L+ I P++ + + I
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILY-ILLVGYPPFWDEDQHRLYQQI 218
Query: 604 KEGNI-LQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
K G +P+ TP+A DL+ + P R + + W +R
Sbjct: 219 KAGAYDFPSPEWDTVTPEA-KDLINKMLTINPAKRITASEALKHPWICQR 267
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 115/306 (37%), Gaps = 76/306 (24%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE----YLQTDFEREACLLAEFDHP 428
LG G V A+ L H + VAVK+L+ + + YL+ F REA A +HP
Sbjct: 20 LGFGGMSEVHLAR--DLRDHRD---VAVKVLRADLARDPSFYLR--FRREAQNAAALNHP 72
Query: 429 NIVKLLGVCAVGKPMC----LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
IV + P ++ EY+ L D + P
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-------------------- 112
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
++ I + + + +HRD+ N LI+ VK+ DFG++R +
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAI------ 166
Query: 545 KGDENDAI--------PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
D +++ +++ E + SDV++ G L+E+ + P+ G +
Sbjct: 167 -ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSP 224
Query: 597 EEVV-KYIKEGNILQAPDNTPDALYD----------LMKLCWNMKPMNRPSFRTIYQTLW 645
V ++++E I P A ++ L L N P NR YQT
Sbjct: 225 VSVAYQHVREDPI------PPSARHEGLSADLDAVVLKALAKN--PENR------YQTAA 270
Query: 646 NIKRDL 651
++ DL
Sbjct: 271 EMRADL 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 43/218 (19%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFER---EACLLAEFDHPN 429
+G G F +V A +L E +VA+K++ L +D R E L H +
Sbjct: 18 IGTGGFAKV--KLACHILTGE---MVAIKIMDKNT---LGSDLPRIKTEIEALKNLRHQH 69
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I +L V + ++ EY G+L D+ I S + +LS +
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDY--IISQD------------------RLSEEE 109
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ QI S + Y+ + + HRDL N L ++ +K+ DFGL K KG+++
Sbjct: 110 TRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKP------KGNKD 163
Query: 550 DAI-----PVRWMPLESILYNKYT-VESDVWAFGVCLW 581
+ + + E I Y E+DVW+ G+ L+
Sbjct: 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLY 201
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 117/290 (40%), Gaps = 45/290 (15%)
Query: 372 DLGQGAFGRVFQ-AKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
+LG+GAF V + K P +E+ + K A ++ + EREA + HPNI
Sbjct: 11 ELGKGAFSVVRRCMKIP---TGQEYAAKIINTKKLSARDHQK--LEREARICRLLKHPNI 65
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDL 490
V+L + L+F+ + G+L F I + Y S D
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYY------------------SEADA 105
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MVVKIADFGLSRKMYLQDYYKGD 547
QI + + VHRDL N L+ + VK+ADFGL+ ++ +GD
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV------QGD 159
Query: 548 END----AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603
+ A ++ E + + Y D+WA GV L+ I P++ + + I
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILY-ILLVGYPPFWDEDQHRLYQQI 218
Query: 604 KEGNI-LQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649
K G +P+ TP+A DL+ + P R + + W +R
Sbjct: 219 KAGAYDFPSPEWDTVTPEA-KDLINKMLTINPAKRITASEALKHPWICQR 267
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 48/187 (25%)
Query: 425 FDHPNIVKLL----GVCAVGK-PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+H NI + + V A G+ L+ EY G L +L S+
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL------------------SL 105
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDR---------KFVHRDLATRNCLINDQMVVKIA 530
H +S+C L A + G+ YL HRDL +RN L+ + I+
Sbjct: 106 HTSDWVSSCRL---AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162
Query: 531 DFGLSRKMYLQDYYK-GDENDAI-----PVRWMPLESI--LYNKYTVES-----DVWAFG 577
DFGLS ++ + G+E++A +R+M E + N ES D++A G
Sbjct: 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG 222
Query: 578 VCLWEIF 584
+ WEIF
Sbjct: 223 LIYWEIF 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEND 550
+ I +QIA + +L + +HRDL N VVK+ DFGL M QD +
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD-QDEEEQTVLT 225
Query: 551 AIPV-----------RWMPLESILYNKYTVESDVWAFGVCLWE-IFSFALQ 589
+P +M E I N Y+ + D+++ G+ L+E ++SF+ Q
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 33/217 (15%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
+G G+FG VFQAK L++ +E + K+L+D+ + RE ++ HPN+V
Sbjct: 48 IGNGSFGVVFQAK---LVESDEVAI--KKVLQDKRFK------NRELQIMRIVKHPNVVD 96
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLIT 492
L + GD D + + Y+ T ++ Q LI
Sbjct: 97 LKAF------------FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIK 144
Query: 493 IAL-QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGDEN- 549
+ + Q+ + Y+ HRD+ +N L++ V+K+ DFG ++ + G+ N
Sbjct: 145 LYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL-----IAGEPNV 199
Query: 550 DAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
I R+ +++ YT D+W+ G + E+
Sbjct: 200 SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM 236
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 104/273 (38%), Gaps = 52/273 (19%)
Query: 394 EFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRG 453
EF + + K + +E ++ LL HPNI+ L V GK + ++ E M G
Sbjct: 49 EFAVKIIDKSKRDPTEEIE-------ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG 101
Query: 454 DLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRD 513
+L D I R S + + I + YL + VHRD
Sbjct: 102 ELLD--------------------KILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRD 141
Query: 514 LATRNCLINDQM----VVKIADFGLSRKMYLQDYYKGDENDAI-----PVRWMPLESILY 564
L N L D+ ++I DFG ++++ EN + ++ E +
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGFAKQLRA-------ENGLLMTPCYTANFVAPEVLER 194
Query: 565 NKYTVESDVWAFGVCLWEIFS----FALQPYYGLTHEEVVKYIKEGNILQAP---DNTPD 617
Y D+W+ GV L+ + + FA P T EE++ I G + ++ D
Sbjct: 195 QGYDAACDIWSLGVLLYTMLTGYTPFANGP--DDTPEEILARIGSGKFSLSGGYWNSVSD 252
Query: 618 ALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
DL+ ++ P R + + + W + D
Sbjct: 253 TAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWD 285
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 34/248 (13%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVA-VKMLKDEASEY 410
++ K+ L+ D V+ +G+GAFG V + K L++ +M+K S +
Sbjct: 62 KIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAF 121
Query: 411 LQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYING 470
F E ++A + P +V+L K + ++ EYM GDL + + +NY
Sbjct: 122 ----FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM-----SNY--- 169
Query: 471 TYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530
+ + T +++ +AL M +HRD+ N L++ +K+A
Sbjct: 170 ------DVPEKWAKFYTAEVV-LALDAIHSM------GLIHRDVKPDNMLLDKHGHLKLA 216
Query: 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK-----YTVESDVWAFGVCLWEIFS 585
DFG KM D P P +L ++ Y E D W+ GV L+E+
Sbjct: 217 DFGTCMKMDETGMVHCDTAVGTPDYISP--EVLKSQGGDGYYGRECDWWSVGVFLFEML- 273
Query: 586 FALQPYYG 593
P+Y
Sbjct: 274 VGDTPFYA 281
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 113/274 (41%), Gaps = 34/274 (12%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML-KDEASEYL 411
K++Q+ R D ++ +G+GAFG V K LK+ + + A+K+L K E +
Sbjct: 62 FTSKVKQMRLHREDFEILKVIGRGAFGEVAVVK----LKNAD-KVFAMKILNKWEMLKRA 116
Query: 412 QTD-FEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYING 470
+T F E +L D I L + L+ +Y GDL L
Sbjct: 117 ETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL----------- 165
Query: 471 TYSSMESSIHRVPQ-LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529
S E R+P+ ++ L + + I S + +VHRD+ N L++ +++
Sbjct: 166 --SKFED---RLPEEMARFYLAEMVIAIDS----VHQLHYVHRDIKPDNILMDMNGHIRL 216
Query: 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMP--LESILYNK--YTVESDVWAFGVCLWEIFS 585
ADFG K+ + P P L+++ K Y E D W+ GVC++E+
Sbjct: 217 ADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML- 275
Query: 586 FALQPYYGLTHEEVV-KYIKEGNILQAPDNTPDA 618
+ P+Y + E K + Q P D
Sbjct: 276 YGETPFYAESLVETYGKIMNHKERFQFPTQVTDV 309
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 50/255 (19%)
Query: 353 LNPKLEQLEFPRNDIIYVRDLGQGAFGRVF----QAKAPGLLKHEEFTL----------- 397
LN +++ + ND +R L QG F ++ K L K+E+ L
Sbjct: 19 LNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNN 78
Query: 398 --VAVKMLKDEASEYLQ--TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRG 453
+++K D+ LQ TD + E CL E G+ + +++EYM
Sbjct: 79 DKISIKSKYDDFKNELQIITDIKNEYCLTCE----------GIITNYDEVYIIYEYMEND 128
Query: 454 DLNDFLRICSPNNYINGTYSSMESSIHRVP-QLSTCDLITIALQIASGMVYLSDRKFV-H 511
+ L+ ++ Y+ +P Q+ C I + + Y+ + K + H
Sbjct: 129 SI---LKFDEYFFVLDKNYTCF------IPIQVIKC----IIKSVLNSFSYIHNEKNICH 175
Query: 512 RDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEN--DAIPVRWMPLESILYNKYTV 569
RD+ N L++ VK++DFG S M + KG + +P + ES YN V
Sbjct: 176 RDVKPSNILMDKNGRVKLSDFGESEYM-VDKKIKGSRGTYEFMPPEFFSNES-SYNGAKV 233
Query: 570 ESDVWAFGVCLWEIF 584
D+W+ G+CL+ +F
Sbjct: 234 --DIWSLGICLYVMF 246
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 37/244 (15%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
LGQGA VF+ + + L A+K+ + S D + RE +L + +H NIV
Sbjct: 17 LGQGATANVFRGR-----HKKTGDLFAIKVFNN-ISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 432 KLLGV--CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
KL + + L+ E+ G L L P+N Y ES +
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLE--EPSN----AYGLPES-----------E 113
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLI----NDQMVVKIADFGLSRKMYLQDYYK 545
+ + + GM +L + VHR++ N + + Q V K+ DFG +R++ + +
Sbjct: 114 FLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
Query: 546 ---GDENDAIPVRW--MPLESILYNKYTVESDVWAFGVCLWEIFSFAL--QPYYGLTHEE 598
G E P + L KY D+W+ GV + + +L +P+ G +
Sbjct: 174 XLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233
Query: 599 VVKY 602
V Y
Sbjct: 234 EVMY 237
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 115/306 (37%), Gaps = 76/306 (24%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE----YLQTDFEREACLLAEFDHP 428
LG G V A+ L H + VAVK+L+ + + YL+ F REA A +HP
Sbjct: 20 LGFGGMSEVHLAR--DLRDHRD---VAVKVLRADLARDPSFYLR--FRREAQNAAALNHP 72
Query: 429 NIVKLLGVCAVGKPMC----LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
IV + P ++ EY+ L D + P
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-------------------- 112
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
++ I + + + +HRD+ N +I+ VK+ DFG++R +
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI------ 166
Query: 545 KGDENDAI--------PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
D +++ +++ E + SDV++ G L+E+ + P+ G +
Sbjct: 167 -ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSP 224
Query: 597 EEVV-KYIKEGNILQAPDNTPDALYD----------LMKLCWNMKPMNRPSFRTIYQTLW 645
V ++++E I P A ++ L L N P NR YQT
Sbjct: 225 VSVAYQHVREDPI------PPSARHEGLSADLDAVVLKALAKN--PENR------YQTAA 270
Query: 646 NIKRDL 651
++ DL
Sbjct: 271 EMRADL 276
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
ND R +G+G FG V+ + K + K +K + E L + L++
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
D P IV + + + + M GDL+ L S H V
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL------------------SQHGV-- 287
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
S D+ A +I G+ ++ +R V+RDL N L+++ V+I+D GL+
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
ND R +G+G FG V+ + K + K +K + E L + L++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
D P IV + + + + M GDL+ L S H V
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL------------------SQHGV-- 288
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
S D+ A +I G+ ++ +R V+RDL N L+++ V+I+D GL+
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
ND R +G+G FG V+ + K + K +K + E L + L++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
D P IV + + + + M GDL+ L S H V
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL------------------SQHGV-- 288
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
S D+ A +I G+ ++ +R V+RDL N L+++ V+I+D GL+
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
ND R +G+G FG V+ + K + K +K + E L + L++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
D P IV + + + + M GDL+ L S H V
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL------------------SQHGV-- 288
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535
S D+ A +I G+ ++ +R V+RDL N L+++ V+I+D GL+
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 37/244 (15%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE-REACLLAEFDHPNIV 431
LGQGA VF+ + + L A+K+ + S D + RE +L + +H NIV
Sbjct: 17 LGQGATANVFRGR-----HKKTGDLFAIKVFNN-ISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 432 KLLGV--CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
KL + + L+ E+ G L L P+N Y ES +
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLE--EPSN----AYGLPES-----------E 113
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLI----NDQMVVKIADFGLSRKMYLQDYYK 545
+ + + GM +L + VHR++ N + + Q V K+ DFG +R++ + +
Sbjct: 114 FLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV 173
Query: 546 ---GDENDAIPVRW--MPLESILYNKYTVESDVWAFGVCLWEIFSFAL--QPYYGLTHEE 598
G E P + L KY D+W+ GV + + +L +P+ G +
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK 233
Query: 599 VVKY 602
V Y
Sbjct: 234 EVMY 237
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 125/314 (39%), Gaps = 72/314 (22%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE 424
N + +R +G G FGRV + K+ AVK++++ +Y ++ + EA +L +
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKY-----YAVKVVRN-IKKYTRSA-KIEADILKK 87
Query: 425 FDHPNIVKLLGVCAVGK-----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSI 479
+ +I V GK MCL+FE +G I + NNY NG +
Sbjct: 88 IQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPS----LYEIITRNNY-NGFHIE----- 137
Query: 480 HRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND---------------- 523
D+ ++I + YL H DL N L++D
Sbjct: 138 ---------DIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188
Query: 524 ---------QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVW 574
+K+ DFG + + DY+ N ++ E IL + V SD+W
Sbjct: 189 KKIQIYRTKSTGIKLIDFGCA--TFKSDYHGSIINTR---QYRAPEVILNLGWDVSSDMW 243
Query: 575 AFGVCLWEIF--SFALQPYYGLTHEEVVKYIKE---GNILQAPDNTPDALY---DLMKLC 626
+FG L E++ S + + + H +++ I + N+L T + Y D +KL
Sbjct: 244 SFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLA 303
Query: 627 WNMKPMNRPSFRTI 640
W P N S +I
Sbjct: 304 W---PENASSINSI 314
>pdb|1PK2|A Chain A, Solution Structure Of The Tissue-Type Plasminogen
Activator Kringle 2 Domain Complexed To 6-Aminohexanoic
Acid An Antifibrinolytic Drug
Length = 90
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 182 EITYDCIRGRGRFYQGTVNTTVGGLACQRWDA----KEPHAHERPPPVFPELNNSENYCR 237
E DC G G Y+GT + T G +C W++ + + + P L NYCR
Sbjct: 2 EGNSDCYFGNGSAYRGTHSLTESGASCLPWNSMILIGKVYTAQNPSAQALGL-GKHNYCR 60
Query: 238 NAGGEEPSPWCYTM-DPNVRWQRCEIPTCA 266
N G+ PWC+ + + + W+ C++P+C+
Sbjct: 61 NPDGDA-KPWCHVLKNRRLTWEYCDVPSCS 89
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 115/306 (37%), Gaps = 76/306 (24%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE----YLQTDFEREACLLAEFDHP 428
LG G V A+ L H + VAVK+L+ + + YL+ F REA A +HP
Sbjct: 20 LGFGGMSEVHLAR--DLRLHRD---VAVKVLRADLARDPSFYLR--FRREAQNAAALNHP 72
Query: 429 NIVKLLGVCAVGKPMC----LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
IV + P ++ EY+ L D + P
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-------------------- 112
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
++ I + + + +HRD+ N +I+ VK+ DFG++R +
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI------ 166
Query: 545 KGDENDAI--------PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
D +++ +++ E + SDV++ G L+E+ + P+ G +
Sbjct: 167 -ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSP 224
Query: 597 EEVV-KYIKEGNILQAPDNTPDALYD----------LMKLCWNMKPMNRPSFRTIYQTLW 645
V ++++E I P A ++ L L N P NR YQT
Sbjct: 225 VSVAYQHVREDPI------PPSARHEGLSADLDAVVLKALAKN--PENR------YQTAA 270
Query: 646 NIKRDL 651
++ DL
Sbjct: 271 EMRADL 276
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 125/301 (41%), Gaps = 35/301 (11%)
Query: 352 RLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL 411
+++P+ + +F D+ + ++G+GA+G V + ++ ++AVK ++ E
Sbjct: 10 KISPE-QHWDFTAEDLKDLGEIGRGAYGSVNK-----MVHKPSGQIMAVKRIRSTVDEKE 63
Query: 412 QTDFEREA-CLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYING 470
Q + ++ D P IV+ G + E M S + +
Sbjct: 64 QKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS----------TSFDKFYKY 113
Query: 471 TYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVVKI 529
YS ++ I P+ L I L + +L + K +HRD+ N L++ +K+
Sbjct: 114 VYSVLDDVI---PEEI---LGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKL 167
Query: 530 ADFGLSRKMY---LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF 586
DFG+S ++ + G P R P S Y V SDVW+ G+ L+E+ +
Sbjct: 168 CDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSAS--RQGYDVRSDVWSLGITLYELATG 225
Query: 587 ALQ-PYYGLTHEEVVKYIKEGNILQAPDNT----PDALYDLMKLCWNMKPMNRPSFRTIY 641
P + +++ + +K G+ Q ++ + + + LC RP ++ +
Sbjct: 226 RFPYPKWNSVFDQLTQVVK-GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
Query: 642 Q 642
+
Sbjct: 285 K 285
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 104/266 (39%), Gaps = 58/266 (21%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML--KDEASEYLQ 412
P L Q R I+ +G+G FG V++ K G EE VAVK+ ++E S + +
Sbjct: 20 PLLVQRTIART-IVLQESIGKGRFGEVWRGKWRG----EE---VAVKIFSSREERSWFRE 71
Query: 413 TDFEREACLLAEFDHPNIVKLLGV----CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYI 468
+ + L H NI+ + + L+ +Y G L D+L N Y
Sbjct: 72 AEIYQTVML----RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYT 122
Query: 469 NGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYL--------SDRKFVHRDLATRNCL 520
++ +I +AL ASG+ +L HRDL ++N L
Sbjct: 123 ----------------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 166
Query: 521 INDQMVVKIADFGLS-RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVE-------SD 572
+ IAD GL+ R D N + + +L + ++ +D
Sbjct: 167 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRAD 226
Query: 573 VWAFGVCLWEIFSFALQPYYGLTHEE 598
++A G+ WEI A + G HE+
Sbjct: 227 IYAMGLVFWEI---ARRCSIGGIHED 249
>pdb|1PML|A Chain A, Kringle-Kringle Interactions In Multimer Kringle
Structures
pdb|1PML|B Chain B, Kringle-Kringle Interactions In Multimer Kringle
Structures
pdb|1PML|C Chain C, Kringle-Kringle Interactions In Multimer Kringle
Structures
Length = 86
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDA----KEPHAHERPPPVFPELNNSENYCRNAGG 241
DC G G Y+GT + T G +C W++ + + + P L NYCRN G
Sbjct: 2 DCYFGNGSAYRGTHSLTESGASCLPWNSMILIGKVYTAQNPSAQALGLGK-HNYCRNPDG 60
Query: 242 EEPSPWCYTM-DPNVRWQRCEIPTCA 266
+ PWC+ + + + W+ C++P+C+
Sbjct: 61 DA-KPWCHVLKNRRLTWEYCDVPSCS 85
>pdb|1TPK|A Chain A, Crystal Structure Of The Kringle-2 Domain Of Tissue
Plasminogen Activator At 2.4-Angstroms Resolution
pdb|1TPK|B Chain B, Crystal Structure Of The Kringle-2 Domain Of Tissue
Plasminogen Activator At 2.4-Angstroms Resolution
pdb|1TPK|C Chain C, Crystal Structure Of The Kringle-2 Domain Of Tissue
Plasminogen Activator At 2.4-Angstroms Resolution
Length = 88
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 186 DCIRGRGRFYQGTVNTTVGGLACQRWDA----KEPHAHERPPPVFPELNNSENYCRNAGG 241
DC G G Y+GT + T G +C W++ + + + P L NYCRN G
Sbjct: 4 DCYFGNGSAYRGTHSLTESGASCLPWNSMILIGKVYTAQNPSAQALGL-GKHNYCRNPDG 62
Query: 242 EEPSPWCYTM-DPNVRWQRCEIPTCA 266
+ PWC+ + + + W+ C++P+C+
Sbjct: 63 DA-KPWCHVLKNRRLTWEYCDVPSCS 87
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 91/246 (36%), Gaps = 58/246 (23%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ-TDFEREACLLAEFDHPNIV 431
+G G++G V +A E +VA+K + + + RE +L +H ++V
Sbjct: 61 IGTGSYGHVCEA-----YDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVV 115
Query: 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVP-QLSTCDL 490
K+L + D+ F + + + + R P L+ +
Sbjct: 116 KVLDIVIPK-------------DVEKFDELYVVLEIADSDFKKL----FRTPVYLTELHI 158
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEND 550
T+ + G+ Y+ +HRDL NCL+N VK+ DFGL+R + Y + N
Sbjct: 159 KTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV----DYPENGNS 214
Query: 551 AIPV----------------------------RW--MPLESILYNKYTVESDVWAFGVCL 580
+P+ RW P +L YT DVW+ G
Sbjct: 215 QLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIF 274
Query: 581 WEIFSF 586
E+ +
Sbjct: 275 AELLNM 280
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 115/306 (37%), Gaps = 76/306 (24%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE----YLQTDFEREACLLAEFDHP 428
LG G V A+ L H + VAVK+L+ + + YL+ F REA A +HP
Sbjct: 20 LGFGGMSEVHLAR--DLRLHRD---VAVKVLRADLARDPSFYLR--FRREAQNAAALNHP 72
Query: 429 NIVKLLGVCAVGKPMC----LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
IV + P ++ EY+ L D + P
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-------------------- 112
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
++ I + + + +HRD+ N +I+ VK+ DFG++R +
Sbjct: 113 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI------ 166
Query: 545 KGDENDAI--------PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
D +++ +++ E + SDV++ G L+E+ + P+ G +
Sbjct: 167 -ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSP 224
Query: 597 EEVV-KYIKEGNILQAPDNTPDALYD----------LMKLCWNMKPMNRPSFRTIYQTLW 645
V ++++E I P A ++ L L N P NR YQT
Sbjct: 225 VSVAYQHVREDPI------PPSARHEGLSADLDAVVLKALAKN--PENR------YQTAA 270
Query: 646 NIKRDL 651
++ DL
Sbjct: 271 EMRADL 276
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 104/266 (39%), Gaps = 58/266 (21%)
Query: 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML--KDEASEYLQ 412
P L Q R I+ +G+G FG V++ K G EE VAVK+ ++E S + +
Sbjct: 33 PLLVQRTIART-IVLQESIGKGRFGEVWRGKWRG----EE---VAVKIFSSREERSWFRE 84
Query: 413 TDFEREACLLAEFDHPNIVKLLGV----CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYI 468
+ + L H NI+ + + L+ +Y G L D+L N Y
Sbjct: 85 AEIYQTVML----RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYT 135
Query: 469 NGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYL--------SDRKFVHRDLATRNCL 520
++ +I +AL ASG+ +L HRDL ++N L
Sbjct: 136 ----------------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL 179
Query: 521 INDQMVVKIADFGLS-RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVE-------SD 572
+ IAD GL+ R D N + + +L + ++ +D
Sbjct: 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRAD 239
Query: 573 VWAFGVCLWEIFSFALQPYYGLTHEE 598
++A G+ WEI A + G HE+
Sbjct: 240 IYAMGLVFWEI---ARRCSIGGIHED 262
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 37/227 (16%)
Query: 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK----DEASEYLQTDFEREAC 420
ND+ + ++G G G+V++ + + ++AVK ++ E ++ + D +
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRF-----RKTGHVIAVKQMRRSGNKEENKRILMDLD---V 76
Query: 421 LLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
+L D P IV+ G + + E MG R+ P
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGP---------------- 120
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRK-FVHRDLATRNCLINDQMVVKIADFGLSRKMY 539
+P+ L + + I + YL ++ +HRD+ N L++++ +K+ DFG+S ++
Sbjct: 121 -IPERI---LGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176
Query: 540 ---LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
+D G P R P + + Y + +DVW+ G+ L E+
Sbjct: 177 DDKAKDRSAGCAAYMAPERIDPPDPTKPD-YDIRADVWSLGISLVEL 222
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 110/269 (40%), Gaps = 54/269 (20%)
Query: 364 RNDIIYVRDLGQGAFGRV-FQAKAPGLLKHEEFTLVAVK-MLKDEASEYLQTDFEREACL 421
+N ++ + LG G+ G V FQ G VAVK ML D L E L
Sbjct: 32 KNLVVSEKILGYGSSGTVVFQGSFQG-------RPVAVKRMLIDFCDIALM-----EIKL 79
Query: 422 LAEFD-HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
L E D HPN+++ + F Y+ L +C+ N + S S
Sbjct: 80 LTESDDHPNVIRYYCSETTDR-----FLYIA-------LELCNLN--LQDLVESKNVSDE 125
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN-------------DQMVV 527
+ + I++ QIASG+ +L K +HRDL +N L++ + + +
Sbjct: 126 NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 185
Query: 528 KIADFGLSRKM-YLQDYYKGDENDAIPVR-WMP---LESILYNKYTVESDVWAFGVCLWE 582
I+DFGL +K+ Q ++ + N+ W LE + T D+++ G +
Sbjct: 186 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYY 245
Query: 583 IFSFALQPYYGLTHEEVVKYIKEGNILQA 611
I S P+ KY +E NI++
Sbjct: 246 ILSKGKHPFGD-------KYSRESNIIRG 267
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 110/269 (40%), Gaps = 54/269 (20%)
Query: 364 RNDIIYVRDLGQGAFGRV-FQAKAPGLLKHEEFTLVAVK-MLKDEASEYLQTDFEREACL 421
+N ++ + LG G+ G V FQ G VAVK ML D L E L
Sbjct: 32 KNLVVSEKILGYGSSGTVVFQGSFQG-------RPVAVKRMLIDFCDIALM-----EIKL 79
Query: 422 LAEFD-HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
L E D HPN+++ + F Y+ L +C+ N + S S
Sbjct: 80 LTESDDHPNVIRYYCSETTDR-----FLYIA-------LELCNLN--LQDLVESKNVSDE 125
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN-------------DQMVV 527
+ + I++ QIASG+ +L K +HRDL +N L++ + + +
Sbjct: 126 NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 185
Query: 528 KIADFGLSRKM-YLQDYYKGDENDAIPVR-WMP---LESILYNKYTVESDVWAFGVCLWE 582
I+DFGL +K+ Q ++ + N+ W LE + T D+++ G +
Sbjct: 186 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYY 245
Query: 583 IFSFALQPYYGLTHEEVVKYIKEGNILQA 611
I S P+ KY +E NI++
Sbjct: 246 ILSKGKHPFGD-------KYSRESNIIRG 267
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 57/254 (22%)
Query: 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML--KDEASEYLQTDFEREACLLAE 424
I+ +G+G FG V++ K G EE VAVK+ ++E S + + + + L
Sbjct: 6 IVLQESIGKGRFGEVWRGKWRG----EE---VAVKIFSSREERSWFREAEIYQTVML--- 55
Query: 425 FDHPNIVKLLGV----CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
H NI+ + + L+ +Y G L D+L N Y
Sbjct: 56 -RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYT------------ 97
Query: 481 RVPQLSTCDLITIALQIASGMVYL--------SDRKFVHRDLATRNCLINDQMVVKIADF 532
++ +I +AL ASG+ +L HRDL ++N L+ IAD
Sbjct: 98 ----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 153
Query: 533 GLS-RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVE-------SDVWAFGVCLWEIF 584
GL+ R D N + + +L + ++ +D++A G+ WEI
Sbjct: 154 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI- 212
Query: 585 SFALQPYYGLTHEE 598
A + G HE+
Sbjct: 213 --ARRCSIGGIHED 224
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 57/254 (22%)
Query: 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML--KDEASEYLQTDFEREACLLAE 424
I+ +G+G FG V++ K G EE VAVK+ ++E S + + + + L
Sbjct: 11 IVLQESIGKGRFGEVWRGKWRG----EE---VAVKIFSSREERSWFREAEIYQTVML--- 60
Query: 425 FDHPNIVKLLGV----CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
H NI+ + + L+ +Y G L D+L N Y
Sbjct: 61 -RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYT------------ 102
Query: 481 RVPQLSTCDLITIALQIASGMVYL--------SDRKFVHRDLATRNCLINDQMVVKIADF 532
++ +I +AL ASG+ +L HRDL ++N L+ IAD
Sbjct: 103 ----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 158
Query: 533 GLS-RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVE-------SDVWAFGVCLWEIF 584
GL+ R D N + + +L + ++ +D++A G+ WEI
Sbjct: 159 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI- 217
Query: 585 SFALQPYYGLTHEE 598
A + G HE+
Sbjct: 218 --ARRCSIGGIHED 229
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 114/300 (38%), Gaps = 64/300 (21%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE----YLQTDFEREACLLAEFDHP 428
LG G V A+ L H + VAVK+L+ + + YL+ F REA A +HP
Sbjct: 37 LGFGGMSEVHLAR--DLRLHRD---VAVKVLRADLARDPSFYLR--FRREAQNAAALNHP 89
Query: 429 NIVKLLGVCAVGKPMC----LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484
IV + P ++ EY+ L D + P
Sbjct: 90 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-------------------- 129
Query: 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY 544
++ I + + + +HRD+ N +I+ VK+ DFG++R +
Sbjct: 130 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI------ 183
Query: 545 KGDENDAI--------PVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
D +++ +++ E + SDV++ G L+E+ + P+ G +
Sbjct: 184 -ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSP 241
Query: 597 EEVV-KYIKEGNILQAPDNTPDAL-YDLMKLCWNM---KPMNRPSFRTIYQTLWNIKRDL 651
V ++++E I P + L DL + P NR YQT ++ DL
Sbjct: 242 VSVAYQHVREDPI--PPSARHEGLSADLDAVVLKALAKNPENR------YQTAAEMRADL 293
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 57/254 (22%)
Query: 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML--KDEASEYLQTDFEREACLLAE 424
I+ +G+G FG V++ K G EE VAVK+ ++E S + + + + L
Sbjct: 8 IVLQESIGKGRFGEVWRGKWRG----EE---VAVKIFSSREERSWFREAEIYQTVML--- 57
Query: 425 FDHPNIVKLLGV----CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
H NI+ + + L+ +Y G L D+L N Y
Sbjct: 58 -RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYT------------ 99
Query: 481 RVPQLSTCDLITIALQIASGMVYL--------SDRKFVHRDLATRNCLINDQMVVKIADF 532
++ +I +AL ASG+ +L HRDL ++N L+ IAD
Sbjct: 100 ----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 155
Query: 533 GLS-RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVE-------SDVWAFGVCLWEIF 584
GL+ R D N + + +L + ++ +D++A G+ WEI
Sbjct: 156 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI- 214
Query: 585 SFALQPYYGLTHEE 598
A + G HE+
Sbjct: 215 --ARRCSIGGIHED 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 104/269 (38%), Gaps = 44/269 (16%)
Query: 394 EFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRG 453
EF + + K + +E ++ LL HPNI+ L V GK + ++ E G
Sbjct: 49 EFAVKIIDKSKRDPTEEIE-------ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGG 101
Query: 454 DLND-FLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHR 512
+L D LR +S E+S + I + YL + VHR
Sbjct: 102 ELLDKILR--------QKFFSEREAS-------------AVLFTITKTVEYLHAQGVVHR 140
Query: 513 DLATRNCLINDQM----VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568
DL N L D+ ++I DFG ++++ ++ ++ E + Y
Sbjct: 141 DLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL--XTPCYTANFVAPEVLERQGYD 198
Query: 569 VESDVWAFGVCLWEIFS----FALQPYYGLTHEEVVKYIKEGNILQAP---DNTPDALYD 621
D+W+ GV L+ + FA P T EE++ I G + ++ D D
Sbjct: 199 AACDIWSLGVLLYTXLTGYTPFANGP--DDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 622 LMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650
L+ ++ P R + + + W + D
Sbjct: 257 LVSKXLHVDPHQRLTAALVLRHPWIVHWD 285
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 57/254 (22%)
Query: 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML--KDEASEYLQTDFEREACLLAE 424
I+ +G+G FG V++ K G EE VAVK+ ++E S + + + + L
Sbjct: 5 IVLQESIGKGRFGEVWRGKWRG----EE---VAVKIFSSREERSWFREAEIYQTVML--- 54
Query: 425 FDHPNIVKLLGV----CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
H NI+ + + L+ +Y G L D+L N Y
Sbjct: 55 -RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYT------------ 96
Query: 481 RVPQLSTCDLITIALQIASGMVYL--------SDRKFVHRDLATRNCLINDQMVVKIADF 532
++ +I +AL ASG+ +L HRDL ++N L+ IAD
Sbjct: 97 ----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152
Query: 533 GLS-RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVE-------SDVWAFGVCLWEIF 584
GL+ R D N + + +L + ++ +D++A G+ WEI
Sbjct: 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI- 211
Query: 585 SFALQPYYGLTHEE 598
A + G HE+
Sbjct: 212 --ARRCSIGGIHED 223
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 51/267 (19%)
Query: 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLA 423
++D VR LG+G + VF+ A + +E+ V VK+LK + +RE +L
Sbjct: 36 QDDYQLVRKLGRGKYSEVFE--AINITNNEK---VVVKILKPVK----KNKIKREIKILE 86
Query: 424 EF-DHPNIVKLLGVCA--VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
PNI+ L + V + L+FE++ D +
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT------------------- 127
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMY 539
L+ D+ +I + Y +HRD+ N +I+ + +++ D+GL+
Sbjct: 128 ----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA---- 179
Query: 540 LQDYYKGDE-NDAIPVRWMPLESIL--YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596
+ Y+ G E N + R+ +L Y Y D+W+ G C+ F +P++ H
Sbjct: 180 -EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLG-CMLASMIFRKEPFFH-GH 236
Query: 597 EEVVKYIKEGNILQAPDNTPDALYDLM 623
+ + ++ +L D LYD +
Sbjct: 237 DNYDQLVRIAKVLGTED-----LYDYI 258
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 38/272 (13%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML-KDEASEYLQTD- 414
+++++ R D ++ +G+GAFG V K +K+ E + A+K+L K E + +T
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVK----MKNTE-RIYAMKILNKWEMLKRAETAC 136
Query: 415 FEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS---PNNYINGT 471
F E +L D I L + L+ +Y GDL L P +
Sbjct: 137 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY 196
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
M +I + QL +VHRD+ N L++ +++AD
Sbjct: 197 IGEMVLAIDSIHQL----------------------HYVHRDIKPDNVLLDVNGHIRLAD 234
Query: 532 FGLSRKM----YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
FG KM +Q D I + KY E D W+ GVC++E+ +
Sbjct: 235 FGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML-YG 293
Query: 588 LQPYYGLTHEEVV-KYIKEGNILQAPDNTPDA 618
P+Y + E K + Q P + D
Sbjct: 294 ETPFYAESLVETYGKIMNHEERFQFPSHVTDV 325
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 38/272 (13%)
Query: 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML-KDEASEYLQTD- 414
+++++ R D ++ +G+GAFG V K +K+ E + A+K+L K E + +T
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVK----MKNTE-RIYAMKILNKWEMLKRAETAC 120
Query: 415 FEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICS---PNNYINGT 471
F E +L D I L + L+ +Y GDL L P +
Sbjct: 121 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFY 180
Query: 472 YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531
M +I + QL +VHRD+ N L++ +++AD
Sbjct: 181 IGEMVLAIDSIHQL----------------------HYVHRDIKPDNVLLDVNGHIRLAD 218
Query: 532 FGLSRKM----YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587
FG KM +Q D I + KY E D W+ GVC++E+ +
Sbjct: 219 FGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML-YG 277
Query: 588 LQPYYGLTHEEVV-KYIKEGNILQAPDNTPDA 618
P+Y + E K + Q P + D
Sbjct: 278 ETPFYAESLVETYGKIMNHEERFQFPSHVTDV 309
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 93/244 (38%), Gaps = 52/244 (21%)
Query: 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLL 422
PR + + +G FG V++A+ VAVK+ + + Q+ ERE
Sbjct: 13 PRGSLQLLEIKARGRFGCVWKAQLMN-------DFVAVKIFPLQDKQSWQS--EREIFST 63
Query: 423 AEFDHPNIVKLLGVCAVGK----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESS 478
H N+++ + G + L+ + +G L D+L+ N I
Sbjct: 64 PGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK----GNIITWN------- 112
Query: 479 IHRVPQLSTCDLITIALQIASGMVYLSDR-----------KFVHRDLATRNCLINDQMVV 527
+L +A ++ G+ YL + HRD ++N L+ +
Sbjct: 113 ----------ELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTA 162
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVES------DVWAFGVCLW 581
+ADFGL+ + + GD + + R +L + D++A G+ LW
Sbjct: 163 VLADFGLAVR-FEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLW 221
Query: 582 EIFS 585
E+ S
Sbjct: 222 ELVS 225
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 33/185 (17%)
Query: 491 ITIALQIASGMVYLSDRKFVHRDLATRNCLI-----NDQMVVKIADFGLSRKMYLQDYYK 545
IT+ Q SG+ +L VHRDL N LI + ++ I+DFGL +K+ + +
Sbjct: 121 ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV-GRHS 179
Query: 546 GDENDAIPVR--WMPLESILYN-----KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598
+P W+ E + + YTV D+++ G + + S P +G + +
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTV--DIFSAGCVFYYVISEGSHP-FGKSLQ- 235
Query: 599 VVKYIKEGNILQA--------PDNTPDAL-YDLMKLCWNMKPMNRPSFRTIYQT--LWNI 647
++ NIL P+ D + +L++ M P RPS + + + W++
Sbjct: 236 -----RQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290
Query: 648 KRDLE 652
++ L+
Sbjct: 291 EKQLQ 295
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
RE L+ +H NI+ LL V + + L +F + YI M+
Sbjct: 72 RELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDV-----YI--VMELMD 112
Query: 477 SSIHRVPQ--LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+++ +V Q L + + Q+ G+ +L +HRDL N ++ +KI DFGL
Sbjct: 113 ANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
Query: 535 SRKM---YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
+R ++ Y + + E IL Y D+W+ GV + E+
Sbjct: 173 ARTAGTSFMMTPY------VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 30/173 (17%)
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
RE L+ +H NI+ LL V + + L +F + YI M+
Sbjct: 72 RELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDV-----YI--VMELMD 112
Query: 477 SSIHRVPQ--LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+++ +V Q L + + Q+ G+ +L +HRDL N ++ +KI DFGL
Sbjct: 113 ANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
Query: 535 SRKM---YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
+R ++ Y + + E IL Y D+W+ GV + E+
Sbjct: 173 ARTAGTSFMMTPY------VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 21/115 (18%)
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM-------YLQDYY 544
TI + G ++ + +HRDL NCL+N VK+ DFGL+R + + D
Sbjct: 133 TILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLE 192
Query: 545 KGDE------------NDAIPVRW--MPLESILYNKYTVESDVWAFGVCLWEIFS 585
+ +E + RW P +L YT D+W+ G E+ +
Sbjct: 193 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 88/242 (36%), Gaps = 40/242 (16%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD---FEREACLLAEFDHPN 429
+G+G++G V A G ++ + +Y D F++E ++ DHPN
Sbjct: 17 IGRGSWGEVKIAVQKG---------TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L + L+ E G+L E +H+ D
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGEL-------------------FERVVHKR-VFRESD 107
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRKMYLQDYYKG 546
I + S + Y HRDL N L + +K+ DFGL+ + +
Sbjct: 108 AARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
V LE + Y E D W+ GV ++ + P+ T EV+ I+EG
Sbjct: 168 KVGTPYYVSPQVLEGL----YGPECDEWSAGVMMYVLLC-GYPPFSAPTDXEVMLKIREG 222
Query: 607 NI 608
Sbjct: 223 TF 224
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 88/242 (36%), Gaps = 40/242 (16%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTD---FEREACLLAEFDHPN 429
+G+G++G V A G ++ + +Y D F++E ++ DHPN
Sbjct: 34 IGRGSWGEVKIAVQKG---------TRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 84
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
I++L + L+ E G+L E +H+ D
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGEL-------------------FERVVHKR-VFRESD 124
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRKMYLQDYYKG 546
I + S + Y HRDL N L + +K+ DFGL+ + +
Sbjct: 125 AARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 184
Query: 547 DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606
V LE + Y E D W+ GV ++ + P+ T EV+ I+EG
Sbjct: 185 KVGTPYYVSPQVLEGL----YGPECDEWSAGVMMYVLLC-GYPPFSAPTDXEVMLKIREG 239
Query: 607 NI 608
Sbjct: 240 TF 241
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 90/238 (37%), Gaps = 47/238 (19%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG+GA RV L+ +E+ AVK+++ + F L H N+++
Sbjct: 21 LGEGAHARV--QTCINLITSQEY---AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLIT 492
L+ L+FE M G S+ S IH+ + +
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGG--------------------SILSHIHKRRHFNELEASV 115
Query: 493 IALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ +AS + +L ++ HRDL N L N VKI DFGL + L GD +
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKL----NGDCS 171
Query: 550 D-AIPVRWMPLESILY-------------NKYTVESDVWAFGVCLWEIFSFALQPYYG 593
+ P P S Y + Y D+W+ GV L+ + S P+ G
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS-GYPPFVG 228
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 44/232 (18%)
Query: 364 RNDIIYVRDLGQGAFGRV---FQAK-----APGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
R++ I + LG GA G V F+ K A ++ +F + + + EA L +
Sbjct: 15 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR----EADPALNVET 70
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
E E +L + +HP I+K+ + ++ E M G+L D + G
Sbjct: 71 EIE--ILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFD---------KVVGNKRLK 118
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM---VVKIADF 532
E+ TC L + +A + YL + +HRDL N L++ Q ++KI DF
Sbjct: 119 EA---------TCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 167
Query: 533 GLSR---KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLW 581
G S+ + L G P + + + YN+ D W+ GV L+
Sbjct: 168 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 93/226 (41%), Gaps = 36/226 (15%)
Query: 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTD---FEREACL 421
D +R +G+G++ +V + + +V +++ D E +++QT+ FE+ +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS-- 110
Query: 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481
+HP +V L + + EY+ GDL + R
Sbjct: 111 ----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLM--------------------FHMQR 146
Query: 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ 541
+L + +I+ + YL +R ++RDL N L++ + +K+ D+G+ + +
Sbjct: 147 QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----E 202
Query: 542 DYYKGDENDAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFS 585
GD ++ E + Y D WA GV ++E+ +
Sbjct: 203 GLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 248
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 97/231 (41%), Gaps = 46/231 (19%)
Query: 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK------DEASEYLQTD---FE 416
D +R +G+G++ +V + LK + + A+K++K DE +++QT+ FE
Sbjct: 10 DFDLLRVIGRGSYAKVLLVR----LKKTD-RIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
+ + +HP +V L + + EY+ GDL
Sbjct: 65 QAS------NHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-------------------- 98
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+ R +L + +I+ + YL +R ++RDL N L++ + +K+ D+G+ +
Sbjct: 99 FHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
Query: 537 KMYLQDYYKGDENDAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFS 585
+ GD ++ E + Y D WA GV ++E+ +
Sbjct: 159 ----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 205
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 14/152 (9%)
Query: 496 QIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYKGDENDAIPV 554
Q+ + + + R VHRD+ N LI+ + K+ DFG ++ + Y D
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRV--- 203
Query: 555 RWMPLESILYNKY-TVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPD 613
+ P E I ++Y + + VW+ G+ L+++ + P+ E + I E +
Sbjct: 204 -YSPPEWISRHQYHALPATVWSLGILLYDMVCGDI-PF------ERDQEILEAELHFPAH 255
Query: 614 NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645
+PD L++ C KP +RPS I W
Sbjct: 256 VSPDCCA-LIRRCLAPKPSSRPSLEEILLDPW 286
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 44/232 (18%)
Query: 364 RNDIIYVRDLGQGAFGRV---FQAK-----APGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
R++ I + LG GA G V F+ K A ++ +F + + + EA L +
Sbjct: 8 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR----EADPALNVET 63
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
E E +L + +HP I+K+ + ++ E M G+L D + G
Sbjct: 64 EIE--ILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFD---------KVVGNKRLK 111
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM---VVKIADF 532
E+ TC L + +A + YL + +HRDL N L++ Q ++KI DF
Sbjct: 112 EA---------TCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 160
Query: 533 GLSR---KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLW 581
G S+ + L G P + + + YN+ D W+ GV L+
Sbjct: 161 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 209
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 105/258 (40%), Gaps = 51/258 (19%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPN 429
+ +G G FG + K L E+ + ++ +K A + +L+ F ++ L D
Sbjct: 15 KKIGCGNFGELRLGKN---LYTNEYVAIKLEPMKSRAPQLHLEYRFYKQ---LGSGDGIP 68
Query: 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCD 489
V G C GK ++ E +G L D +C R L T
Sbjct: 69 QVYYFGPC--GKYNAMVLELLG-PSLEDLFDLCD-----------------RTFSLKT-- 106
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLIN-----DQMVVKIADFGLSRKMYLQDYY 544
++ IA+Q+ S M Y+ + ++RD+ N LI Q V+ I DFGL++ +Y
Sbjct: 107 VLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK-----EYI 161
Query: 545 KGDENDAIP----------VRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594
+ IP R+M + + L + + D+ A G +L P+ GL
Sbjct: 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSL-PWQGL 220
Query: 595 THEEVV-KYIKEGNILQA 611
+ + +Y K G+ +A
Sbjct: 221 KADTLKERYQKIGDTKRA 238
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 97/231 (41%), Gaps = 46/231 (19%)
Query: 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK------DEASEYLQTD---FE 416
D +R +G+G++ +V + LK + + A+K++K DE +++QT+ FE
Sbjct: 21 DFDLLRVIGRGSYAKVLLVR----LKKTD-RIYAMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
+ + +HP +V L + + EY+ GDL
Sbjct: 76 QAS------NHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-------------------- 109
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+ R +L + +I+ + YL +R ++RDL N L++ + +K+ D+G+ +
Sbjct: 110 FHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
Query: 537 KMYLQDYYKGDENDAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFS 585
+ GD ++ E + Y D WA GV ++E+ +
Sbjct: 170 ----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 216
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 44/232 (18%)
Query: 364 RNDIIYVRDLGQGAFGRV---FQAK-----APGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
R++ I + LG GA G V F+ K A ++ +F + + + EA L +
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR----EADPALNVET 64
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
E E +L + +HP I+K+ + ++ E M G+L D + G
Sbjct: 65 EIE--ILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFD---------KVVGNKRLK 112
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM---VVKIADF 532
E+ TC L + +A + YL + +HRDL N L++ Q ++KI DF
Sbjct: 113 EA---------TCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Query: 533 GLSR---KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLW 581
G S+ + L G P + + + YN+ D W+ GV L+
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 97/231 (41%), Gaps = 46/231 (19%)
Query: 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLK------DEASEYLQTD---FE 416
D +R +G+G++ +V + LK + + A+K++K DE +++QT+ FE
Sbjct: 6 DFDLLRVIGRGSYAKVLLVR----LKKTD-RIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
+ + +HP +V L + + EY+ GDL
Sbjct: 61 QAS------NHPFLVGLHSCFQTESRLFFVIEYVNGGDLM-------------------- 94
Query: 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536
+ R +L + +I+ + YL +R ++RDL N L++ + +K+ D+G+ +
Sbjct: 95 FHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
Query: 537 KMYLQDYYKGDENDAI--PVRWMPLESILYNKYTVESDVWAFGVCLWEIFS 585
+ GD ++ E + Y D WA GV ++E+ +
Sbjct: 155 ----EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 201
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 44/232 (18%)
Query: 364 RNDIIYVRDLGQGAFGRV---FQAK-----APGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
R++ I + LG GA G V F+ K A ++ +F + + + EA L +
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR----EADPALNVET 64
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
E E +L + +HP I+K+ + ++ E M G+L D + G
Sbjct: 65 EIE--ILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFD---------KVVGNKRLK 112
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM---VVKIADF 532
E+ TC L + +A + YL + +HRDL N L++ Q ++KI DF
Sbjct: 113 EA---------TCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Query: 533 GLSR---KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLW 581
G S+ + L G P + + + YN+ D W+ GV L+
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 210
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 44/232 (18%)
Query: 364 RNDIIYVRDLGQGAFGRV---FQAK-----APGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
R++ I + LG GA G V F+ K A ++ +F + + + EA L +
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAR----EADPALNVET 64
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
E E +L + +HP I+K+ + ++ E M G+L D + G
Sbjct: 65 EIE--ILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFD---------KVVGNKRLK 112
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM---VVKIADF 532
E+ TC L + +A + YL + +HRDL N L++ Q ++KI DF
Sbjct: 113 EA---------TCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Query: 533 GLSR---KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLW 581
G S+ + L G P + + + YN+ D W+ GV L+
Sbjct: 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 210
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 69/180 (38%), Gaps = 39/180 (21%)
Query: 417 REACLLAEFDHPNIVKLLGVCA-----VGKPMCLLFEYMGRGDLNDFLR----ICSPNNY 467
RE LL F HPNI+ L + + L+ E M R DL + + SP +
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHI 136
Query: 468 INGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
Y I G+ L + VHRDL N L+ D +
Sbjct: 137 QYFMY-----------------------HILLGLHVLHEAGVVHRDLHPGNILLADNNDI 173
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRW--MPLESILYNKYTVESDVWAFGVCLWEIFS 585
I DF L+R +D ++ + RW P + + +T D+W+ G + E+F+
Sbjct: 174 TICDFNLAR----EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 69/180 (38%), Gaps = 39/180 (21%)
Query: 417 REACLLAEFDHPNIVKLLGVCA-----VGKPMCLLFEYMGRGDLNDFLR----ICSPNNY 467
RE LL F HPNI+ L + + L+ E M R DL + + SP +
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHI 136
Query: 468 INGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527
Y I G+ L + VHRDL N L+ D +
Sbjct: 137 QYFMY-----------------------HILLGLHVLHEAGVVHRDLHPGNILLADNNDI 173
Query: 528 KIADFGLSRKMYLQDYYKGDENDAIPVRW--MPLESILYNKYTVESDVWAFGVCLWEIFS 585
I DF L+R +D ++ + RW P + + +T D+W+ G + E+F+
Sbjct: 174 TICDFNLAR----EDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 44/232 (18%)
Query: 364 RNDIIYVRDLGQGAFGRV---FQAK-----APGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
R++ I + LG GA G V F+ K A ++ +F + + + EA L +
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAR----EADPALNVET 189
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
E E +L + +HP I+K+ + ++ E M G+L D + G
Sbjct: 190 EIE--ILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFD---------KVVGNKRLK 237
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM---VVKIADF 532
E+ TC L + +A + YL + +HRDL N L++ Q ++KI DF
Sbjct: 238 EA---------TCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 286
Query: 533 GLSR---KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLW 581
G S+ + L G P + + + YN+ D W+ GV L+
Sbjct: 287 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 335
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 58/273 (21%)
Query: 364 RNDIIYVRDLGQGAFGRV-FQAKAPGLLKHEEFTLVAVK-MLKDEASEYLQTDFEREACL 421
+N ++ + LG G+ G V FQ G VAVK ML D L E L
Sbjct: 14 KNLVVSEKILGYGSSGTVVFQGSFQG-------RPVAVKRMLIDFCDIALM-----EIKL 61
Query: 422 LAEFD-HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
L E D HPN+++ + F Y+ L +C+ N + S S
Sbjct: 62 LTESDDHPNVIRYYCSETTDR-----FLYIA-------LELCNLN--LQDLVESKNVSDE 107
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN-------------DQMVV 527
+ + I++ QIASG+ +L K +HRDL +N L++ + + +
Sbjct: 108 NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167
Query: 528 KIADFGLSRKM-YLQDYYKGDENDAIPVR-WMPLESI-------LYNKYTVESDVWAFGV 578
I+DFGL +K+ Q ++ + N+ W E + + T D+++ G
Sbjct: 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC 227
Query: 579 CLWEIFSFALQPYYGLTHEEVVKYIKEGNILQA 611
+ I S P+ KY +E NI++
Sbjct: 228 VFYYILSKGKHPFGD-------KYSRESNIIRG 253
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 31/184 (16%)
Query: 490 LITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ-----MVVKIADFGLSRKMYLQDYY 544
++ IA+Q+ S M Y+ + ++RD+ N LI Q V+ I DFGL++ +Y
Sbjct: 99 VLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAK-----EYI 153
Query: 545 KGDENDAIP----------VRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594
+ IP R+M + + L + + D+ A G +L P+ GL
Sbjct: 154 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSL-PWQGL 212
Query: 595 THEEVV-KYIKEGNILQAP------DNTPDALYDLMKLCWNMKPMNRPSF---RTIYQTL 644
+ + +Y K G+ + +N P+ + ++ + +P + RT++ L
Sbjct: 213 KADTLKERYQKIGDTKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDL 272
Query: 645 WNIK 648
+ K
Sbjct: 273 FEKK 276
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 509 FVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568
VH DL N LI D M+ K+ DFG++ +M ++ V +MP E+I +
Sbjct: 176 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 569 VES-----------DVWAFGVCLWEIFSFALQPYYGLTHE--EVVKYIKEGNILQAPDNT 615
E+ DVW+ G C+ ++ P+ + ++ ++ I + ++ PD
Sbjct: 235 RENGKSKSKISPKSDVWSLG-CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 293
Query: 616 PDALYDLMKLCWNMKPMNRPSF 637
L D++K C P R S
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISI 315
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 509 FVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568
VH DL N LI D M+ K+ DFG++ +M ++ V +MP E+I +
Sbjct: 132 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 190
Query: 569 VES-----------DVWAFGVCLWEIFSFALQPYYGLTHE--EVVKYIKEGNILQAPDNT 615
E+ DVW+ G C+ ++ P+ + ++ ++ I + ++ PD
Sbjct: 191 RENGKSKSKISPKSDVWSLG-CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 249
Query: 616 PDALYDLMKLCWNMKPMNRPSF 637
L D++K C P R S
Sbjct: 250 EKDLQDVLKCCLKRDPKQRISI 271
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 30/172 (17%)
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
RE L+ +H NI+ LL V P L E+ + M+
Sbjct: 72 RELVLMKXVNHKNIISLLNVFT---PQKTLEEFQD----------------VYLVMELMD 112
Query: 477 SSIHRVPQ--LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+++ +V Q L + + Q+ G+ +L +HRDL N ++ +KI DFGL
Sbjct: 113 ANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 535 SRKM---YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
+R ++ Y + + E IL Y D+W+ G + E+
Sbjct: 173 ARTAGTSFMMTPY------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 509 FVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568
VH DL N LI D M+ K+ DFG++ +M ++ V +MP E+I +
Sbjct: 128 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 186
Query: 569 VES-----------DVWAFGVCLWEIFSFALQPYYGLTHE--EVVKYIKEGNILQAPDNT 615
E+ DVW+ G C+ ++ P+ + ++ ++ I + ++ PD
Sbjct: 187 RENGKSKSKISPKSDVWSLG-CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 245
Query: 616 PDALYDLMKLCWNMKPMNRPSF 637
L D++K C P R S
Sbjct: 246 EKDLQDVLKCCLKRDPKQRISI 267
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 44/232 (18%)
Query: 364 RNDIIYVRDLGQGAFGRV---FQAK-----APGLLKHEEFTLVAVKMLKDEASEYLQTDF 415
R++ I + LG GA G V F+ K A ++ +F + + + EA L +
Sbjct: 148 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAR----EADPALNVET 203
Query: 416 EREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSM 475
E E +L + +HP I+K+ + ++ E M G+L D + G
Sbjct: 204 EIE--ILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFD---------KVVGNKRLK 251
Query: 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM---VVKIADF 532
E+ TC L + +A + YL + +HRDL N L++ Q ++KI DF
Sbjct: 252 EA---------TCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 300
Query: 533 GLSR---KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLW 581
G S+ + L G P + + + YN+ D W+ GV L+
Sbjct: 301 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVILF 349
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 509 FVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568
VH DL N LI D M+ K+ DFG++ +M ++ V +MP E+I +
Sbjct: 176 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSS 234
Query: 569 VES-----------DVWAFGVCLWEIFSFALQPYYGLTHE--EVVKYIKEGNILQAPDNT 615
E+ DVW+ G C+ ++ P+ + ++ ++ I + ++ PD
Sbjct: 235 RENGKSKSKISPKSDVWSLG-CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 293
Query: 616 PDALYDLMKLCWNMKPMNRPSF 637
L D++K C P R S
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISI 315
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 509 FVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568
VH DL N LI D M+ K+ DFG++ +M ++ V +MP E+I +
Sbjct: 176 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 234
Query: 569 VES-----------DVWAFGVCLWEIFSFALQPYYGLTHE--EVVKYIKEGNILQAPDNT 615
E+ DVW+ G C+ ++ P+ + ++ ++ I + ++ PD
Sbjct: 235 RENGKSKSKISPKSDVWSLG-CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 293
Query: 616 PDALYDLMKLCWNMKPMNRPSF 637
L D++K C P R S
Sbjct: 294 EKDLQDVLKCCLKRDPKQRISI 315
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 30/173 (17%)
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
RE L+ +H NI+ LL V + + L +F + YI M+
Sbjct: 72 RELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDV-----YI--VMELMD 112
Query: 477 SSIHRVPQ--LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+++ +V Q L + + Q+ G+ +L +HRDL N ++ +KI DFGL
Sbjct: 113 ANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
Query: 535 SRKM---YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
+R ++ Y + + E IL Y D+W+ G + E+
Sbjct: 173 ARTAGTSFMMTPY------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3LAQ|A Chain A, Structure-Based Engineering Of Species Selectivity In The
Upa-Upar Interaction
pdb|3LAQ|B Chain B, Structure-Based Engineering Of Species Selectivity In The
Upa-Upar Interaction
Length = 134
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 12/84 (14%)
Query: 172 HAQLTEMKTDEITYDCIRGRGRFYQGTVNTTVGGLACQRWDA----KEPHAHERPPPVFP 227
H ++ KT C G G Y+G NT G C W+A ++P+ RP +
Sbjct: 42 HCEIDASKT------CYHGNGDSYRGKANTDTKGRPCLAWNAPAVLQKPYNAHRPDAISL 95
Query: 228 ELNNSENYCRNAGGEEPSPWCYTM 251
L NYCRN ++ PWCY
Sbjct: 96 GL-GKHNYCRNPDNQK-RPWCYVQ 117
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 58/273 (21%)
Query: 364 RNDIIYVRDLGQGAFGRV-FQAKAPGLLKHEEFTLVAVK-MLKDEASEYLQTDFEREACL 421
+N ++ + LG G+ G V FQ G VAVK ML D L E L
Sbjct: 14 KNLVVSEKILGYGSSGTVVFQGSFQG-------RPVAVKRMLIDFCDIALM-----EIKL 61
Query: 422 LAEFD-HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIH 480
L E D HPN+++ + F Y+ L +C+ N + S S
Sbjct: 62 LTESDDHPNVIRYYCSETTDR-----FLYIA-------LELCNLN--LQDLVESKNVSDE 107
Query: 481 RVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN-------------DQMVV 527
+ + I++ QIASG+ +L K +HRDL +N L++ + + +
Sbjct: 108 NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167
Query: 528 KIADFGLSRKM-YLQDYYKGDENDAIPVR-WMPLESI-------LYNKYTVESDVWAFGV 578
I+DFGL +K+ Q ++ + N+ W E + + T D+++ G
Sbjct: 168 LISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGC 227
Query: 579 CLWEIFSFALQPYYGLTHEEVVKYIKEGNILQA 611
+ I S P+ KY +E NI++
Sbjct: 228 VFYYILSKGKHPFGD-------KYSRESNIIRG 253
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 509 FVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568
VH DL N LI D M+ K+ DFG++ +M ++ V +MP E+I +
Sbjct: 129 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 187
Query: 569 VES-----------DVWAFGVCLWEIFSFALQPYYGLTHE--EVVKYIKEGNILQAPDNT 615
E+ DVW+ G C+ ++ P+ + ++ ++ I + ++ PD
Sbjct: 188 RENGKSKSKISPKSDVWSLG-CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 246
Query: 616 PDALYDLMKLCWNMKPMNRPSF 637
L D++K C P R S
Sbjct: 247 EKDLQDVLKCCLKRDPKQRISI 268
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 86/228 (37%), Gaps = 44/228 (19%)
Query: 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430
R GQG FG V K K ++ K+++D + ++ LA HPNI
Sbjct: 29 RMAGQGTFGTVQLGKE----KSTGMSVAIKKVIQDPRFRNRELQIMQD---LAVLHHPNI 81
Query: 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR--------- 481
V+L F +G D D Y+N + ++HR
Sbjct: 82 VQLQS----------YFYTLGERDRRDI--------YLNVVMEYVPDTLHRCCRNYYRRQ 123
Query: 482 -VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND-QMVVKIADFGLSRKMY 539
P + L + G ++L HRD+ N L+N+ +K+ DFG ++K+
Sbjct: 124 VAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL- 182
Query: 540 LQDYYKGDENDA-IPVRWMPLESILY--NKYTVESDVWAFGVCLWEIF 584
+ N A I R+ +++ YT D+W+ G E+
Sbjct: 183 ----SPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 509 FVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568
VH DL N LI D M+ K+ DFG++ +M ++ V +MP E+I +
Sbjct: 148 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 569 VES-----------DVWAFGVCLWEIFSFALQPYYGLTHE--EVVKYIKEGNILQAPDNT 615
E+ DVW+ G C+ ++ P+ + ++ ++ I + ++ PD
Sbjct: 207 RENGKSKSKISPKSDVWSLG-CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 265
Query: 616 PDALYDLMKLCWNMKPMNRPSF 637
L D++K C P R S
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISI 287
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 492 TIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538
TI + G ++ + +HRDL NCL+N VKI DFGL+R +
Sbjct: 135 TILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 30/173 (17%)
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
RE L+ +H NI+ LL V + + L +F + YI M+
Sbjct: 72 RELVLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDV-----YI--VMELMD 112
Query: 477 SSIHRVPQ--LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+++ +V Q L + + Q+ G+ +L +HRDL N ++ +KI DFGL
Sbjct: 113 ANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
Query: 535 SRKM---YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
+R ++ Y + + E IL Y D+W+ G + E+
Sbjct: 173 ARTAGTSFMMTPY------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 509 FVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568
VH DL N LI D M+ K+ DFG++ +M ++ V +MP E+I +
Sbjct: 148 IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSS 206
Query: 569 VES-----------DVWAFGVCLWEIFSFALQPYYGLTHE--EVVKYIKEGNILQAPDNT 615
E+ DVW+ G C+ ++ P+ + ++ ++ I + ++ PD
Sbjct: 207 RENGKSKSKISPKSDVWSLG-CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 265
Query: 616 PDALYDLMKLCWNMKPMNRPSF 637
L D++K C P R S
Sbjct: 266 EKDLQDVLKCCLKRDPKQRISI 287
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 30/172 (17%)
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
RE L+ +H NI+ LL V P L E+ + M+
Sbjct: 72 RELVLMKXVNHKNIISLLNVFT---PQKTLEEFQD----------------VYLVMELMD 112
Query: 477 SSIHRVPQ--LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+++ +V Q L + + Q+ G+ +L +HRDL N ++ +KI DFGL
Sbjct: 113 ANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
Query: 535 SRKM---YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
+R ++ Y + + E IL Y D+W+ G + E+
Sbjct: 173 ARTAGTSFMMTPY------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 30/173 (17%)
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
RE L+ +H NI+ LL V + + L +F + YI M+
Sbjct: 72 RELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDV-----YI--VMELMD 112
Query: 477 SSIHRVPQ--LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+++ +V Q L + + Q+ G+ +L +HRDL N ++ +KI DFGL
Sbjct: 113 ANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
Query: 535 SRKM---YLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584
+R ++ Y + + E IL Y D+W+ G + E+
Sbjct: 173 ARTAGTSFMMTPY------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 24/169 (14%)
Query: 417 REACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSME 476
RE L+ +H NI+ LL V + + L +F + YI M+
Sbjct: 72 RELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDV-----YI--VMELMD 112
Query: 477 SSIHRVPQ--LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGL 534
+++ +V Q L + + Q+ G+ +L +HRDL N ++ +KI DFGL
Sbjct: 113 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
Query: 535 SRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583
+R E + + + E IL Y D+W+ G + E+
Sbjct: 173 ARTAGTSFMM---EPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 89/238 (37%), Gaps = 47/238 (19%)
Query: 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432
LG+GA RV L+ +E+ AVK+++ + F L H N+++
Sbjct: 21 LGEGAHARV--QTCINLITSQEY---AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLIT 492
L+ L+FE M G S+ S IH+ + +
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGG--------------------SILSHIHKRRHFNELEASV 115
Query: 493 IALQIASGMVYLSDRKFVHRDLATRNCLI---NDQMVVKIADFGLSRKMYLQDYYKGDEN 549
+ +AS + +L ++ HRDL N L N VKI DF L + L GD +
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL----NGDCS 171
Query: 550 D-AIPVRWMPLESILY-------------NKYTVESDVWAFGVCLWEIFSFALQPYYG 593
+ P P S Y + Y D+W+ GV L+ + S P+ G
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS-GYPPFVG 228
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,270,563
Number of Sequences: 62578
Number of extensions: 864897
Number of successful extensions: 4176
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 185
Number of HSP's that attempted gapping in prelim test: 1576
Number of HSP's gapped (non-prelim): 1208
length of query: 653
length of database: 14,973,337
effective HSP length: 105
effective length of query: 548
effective length of database: 8,402,647
effective search space: 4604650556
effective search space used: 4604650556
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)