Query psy5539
Match_columns 653
No_of_seqs 522 out of 3667
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 20:08:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5539.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5539hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1026|consensus 100.0 5.3E-90 1.1E-94 757.9 34.5 585 30-650 160-765 (774)
2 KOG0197|consensus 100.0 7.4E-54 1.6E-58 452.0 20.1 266 357-649 198-463 (468)
3 KOG1095|consensus 100.0 3.3E-51 7.2E-56 466.3 27.1 278 361-651 688-965 (1025)
4 KOG0196|consensus 100.0 5.1E-52 1.1E-56 448.3 18.6 269 361-650 625-894 (996)
5 KOG0192|consensus 100.0 4E-48 8.7E-53 409.5 27.8 265 359-651 35-307 (362)
6 KOG0581|consensus 100.0 1.2E-48 2.6E-53 395.3 22.3 258 362-649 76-341 (364)
7 KOG1094|consensus 100.0 8.4E-48 1.8E-52 404.0 22.7 264 360-647 533-804 (807)
8 KOG4278|consensus 100.0 4.5E-47 9.8E-52 399.3 20.1 270 354-649 256-525 (1157)
9 KOG0194|consensus 100.0 2.2E-46 4.8E-51 401.4 21.2 272 358-651 150-424 (474)
10 KOG4257|consensus 100.0 1E-45 2.2E-50 390.0 18.7 273 355-649 379-651 (974)
11 KOG0575|consensus 100.0 6.6E-45 1.4E-49 387.7 24.7 253 365-646 18-272 (592)
12 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.8E-44 4E-49 384.0 27.7 291 360-650 2-337 (338)
13 KOG0595|consensus 100.0 6.9E-45 1.5E-49 370.8 22.7 252 364-644 9-269 (429)
14 KOG0598|consensus 100.0 1.1E-44 2.4E-49 366.5 22.9 257 361-645 21-283 (357)
15 KOG1187|consensus 100.0 1.3E-44 2.9E-49 385.0 22.1 267 355-648 65-353 (361)
16 KOG0591|consensus 100.0 6.6E-46 1.4E-50 360.4 10.7 256 363-642 17-280 (375)
17 KOG0615|consensus 100.0 5.5E-45 1.2E-49 370.8 15.4 256 363-647 170-441 (475)
18 cd05048 PTKc_Ror Catalytic Dom 100.0 4.8E-43 1.1E-47 362.8 27.2 280 363-646 3-282 (283)
19 PF07714 Pkinase_Tyr: Protein 100.0 2.9E-43 6.4E-48 360.7 24.9 258 368-644 2-259 (259)
20 KOG1024|consensus 100.0 3E-43 6.4E-48 354.8 24.0 292 349-652 268-560 (563)
21 KOG0193|consensus 100.0 4.9E-44 1.1E-48 379.0 18.4 266 357-651 384-657 (678)
22 cd07469 CRD_TK_ROR_related Cys 100.0 9.4E-45 2E-49 324.0 10.7 146 31-179 1-146 (147)
23 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.8E-42 4E-47 355.9 29.2 264 362-647 2-265 (266)
24 cd05104 PTKc_Kit Catalytic dom 100.0 9E-43 1.9E-47 376.6 27.3 292 356-647 26-374 (375)
25 KOG1025|consensus 100.0 3.6E-44 7.8E-49 388.5 16.2 263 367-650 698-960 (1177)
26 KOG0592|consensus 100.0 2.3E-43 5.1E-48 369.8 20.0 257 362-645 70-340 (604)
27 cd05062 PTKc_IGF-1R Catalytic 100.0 3.7E-42 8E-47 355.5 28.8 275 361-645 2-276 (277)
28 cd05096 PTKc_DDR1 Catalytic do 100.0 4.6E-42 1E-46 359.9 29.5 283 362-645 2-303 (304)
29 cd05091 PTKc_Ror2 Catalytic do 100.0 2.3E-42 5E-47 358.0 26.0 277 365-645 5-281 (283)
30 cd05106 PTKc_CSF-1R Catalytic 100.0 3.2E-42 7E-47 372.0 28.0 294 355-648 28-373 (374)
31 KOG0198|consensus 100.0 4.6E-43 1E-47 360.5 18.5 258 365-648 17-281 (313)
32 cd05050 PTKc_Musk Catalytic do 100.0 1E-41 2.2E-46 354.2 28.8 284 362-645 2-287 (288)
33 KOG4721|consensus 100.0 9E-44 2E-48 372.0 12.7 252 358-648 117-369 (904)
34 KOG0200|consensus 100.0 3.4E-42 7.3E-47 391.5 26.6 286 359-648 290-580 (609)
35 cd05049 PTKc_Trk Catalytic dom 100.0 8E-42 1.7E-46 352.9 26.5 277 363-645 3-279 (280)
36 cd05090 PTKc_Ror1 Catalytic do 100.0 3.5E-41 7.5E-46 349.3 29.9 279 363-645 3-281 (283)
37 cd05032 PTKc_InsR_like Catalyt 100.0 2.3E-41 5E-46 348.9 28.4 275 361-645 2-276 (277)
38 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.3E-41 5E-46 367.7 29.8 294 355-648 27-398 (400)
39 cd05053 PTKc_FGFR Catalytic do 100.0 3.1E-41 6.6E-46 351.3 29.2 286 359-648 6-292 (293)
40 KOG0199|consensus 100.0 7.3E-43 1.6E-47 372.7 17.0 265 361-646 106-371 (1039)
41 cd05033 PTKc_EphR Catalytic do 100.0 3.6E-41 7.9E-46 345.7 29.1 264 363-647 2-265 (266)
42 cd05108 PTKc_EGFR Catalytic do 100.0 2.9E-41 6.4E-46 356.0 28.6 267 362-649 4-270 (316)
43 cd05093 PTKc_TrkB Catalytic do 100.0 6.3E-41 1.4E-45 348.5 30.6 280 363-650 3-282 (288)
44 cd05061 PTKc_InsR Catalytic do 100.0 5E-41 1.1E-45 349.3 29.8 277 361-647 2-278 (288)
45 cd05036 PTKc_ALK_LTK Catalytic 100.0 7.7E-41 1.7E-45 345.8 29.5 272 361-645 2-276 (277)
46 cd05098 PTKc_FGFR1 Catalytic d 100.0 9.1E-41 2E-45 350.7 30.3 288 359-650 12-302 (307)
47 cd05094 PTKc_TrkC Catalytic do 100.0 1.1E-40 2.3E-45 347.3 29.6 283 363-650 3-285 (291)
48 cd05054 PTKc_VEGFR Catalytic d 100.0 3.6E-41 7.8E-46 358.8 26.6 290 360-649 2-335 (337)
49 cd05045 PTKc_RET Catalytic dom 100.0 1.4E-40 3E-45 346.2 30.0 284 366-649 1-288 (290)
50 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.7E-40 3.7E-45 348.1 30.3 287 360-650 10-299 (304)
51 KOG3653|consensus 100.0 3.5E-41 7.6E-46 348.2 24.2 252 366-649 211-505 (534)
52 cd05111 PTK_HER3 Pseudokinase 100.0 1.8E-40 4E-45 343.5 29.3 267 363-650 5-271 (279)
53 KOG0583|consensus 100.0 6.4E-41 1.4E-45 357.6 26.0 258 362-648 14-280 (370)
54 KOG0600|consensus 100.0 5.2E-42 1.1E-46 357.0 17.1 255 364-645 116-402 (560)
55 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.3E-40 2.8E-45 355.4 28.4 291 360-650 2-342 (343)
56 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.8E-40 8.2E-45 347.2 31.3 288 360-651 7-297 (314)
57 cd05109 PTKc_HER2 Catalytic do 100.0 3.1E-40 6.7E-45 341.5 29.3 268 362-650 4-271 (279)
58 cd05052 PTKc_Abl Catalytic dom 100.0 2.8E-40 6E-45 338.8 28.7 261 361-647 2-262 (263)
59 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.7E-40 5.8E-45 359.3 29.8 291 358-648 30-400 (401)
60 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.9E-40 6.2E-45 337.1 27.4 253 364-644 3-255 (256)
61 KOG0661|consensus 100.0 3.6E-42 7.7E-47 355.9 13.1 253 364-645 9-293 (538)
62 cd05092 PTKc_TrkA Catalytic do 100.0 3.5E-40 7.6E-45 341.5 28.0 277 363-645 3-279 (280)
63 cd05043 PTK_Ryk Pseudokinase d 100.0 6.1E-40 1.3E-44 339.3 29.7 278 361-651 2-280 (280)
64 KOG0593|consensus 100.0 1.1E-41 2.3E-46 334.2 15.5 251 366-644 3-285 (396)
65 PHA02988 hypothetical protein; 100.0 3.2E-40 6.9E-45 342.9 27.4 246 371-649 26-281 (283)
66 cd05035 PTKc_Axl_like Catalyti 100.0 4.1E-40 8.8E-45 338.5 28.0 265 367-647 1-272 (273)
67 cd05084 PTKc_Fes Catalytic dom 100.0 3.8E-40 8.3E-45 335.2 27.2 251 371-645 1-251 (252)
68 cd05072 PTKc_Lyn Catalytic dom 100.0 3.4E-40 7.4E-45 337.4 26.9 259 361-646 2-260 (261)
69 cd05100 PTKc_FGFR3 Catalytic d 100.0 7E-40 1.5E-44 348.3 30.2 287 359-649 6-295 (334)
70 cd05068 PTKc_Frk_like Catalyti 100.0 5.4E-40 1.2E-44 336.1 28.1 259 361-646 2-260 (261)
71 cd05075 PTKc_Axl Catalytic dom 100.0 5.9E-40 1.3E-44 337.5 28.5 263 368-647 2-271 (272)
72 KOG0597|consensus 100.0 1.5E-41 3.1E-46 356.0 16.5 251 365-645 2-253 (808)
73 cd05612 STKc_PRKX_like Catalyt 100.0 9.8E-41 2.1E-45 348.0 22.6 250 365-646 1-257 (291)
74 cd05095 PTKc_DDR2 Catalytic do 100.0 7.3E-40 1.6E-44 341.9 28.9 276 361-645 1-295 (296)
75 KOG0616|consensus 100.0 5.7E-41 1.2E-45 328.6 18.8 252 362-645 41-299 (355)
76 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.2E-39 2.6E-44 334.6 29.1 265 362-647 2-267 (268)
77 cd05115 PTKc_Zap-70 Catalytic 100.0 1E-39 2.2E-44 333.9 28.4 253 372-647 2-255 (257)
78 KOG0588|consensus 100.0 5.6E-41 1.2E-45 358.4 19.6 252 366-647 13-267 (786)
79 PTZ00263 protein kinase A cata 100.0 1.9E-40 4.2E-45 352.0 23.8 251 363-645 16-273 (329)
80 cd05055 PTKc_PDGFR Catalytic d 100.0 1E-39 2.2E-44 342.2 28.5 271 359-647 29-301 (302)
81 cd05058 PTKc_Met_Ron Catalytic 100.0 1.2E-39 2.7E-44 333.3 28.5 258 371-649 1-261 (262)
82 cd05097 PTKc_DDR_like Catalyti 100.0 6.9E-40 1.5E-44 341.9 27.1 277 361-645 1-294 (295)
83 cd05089 PTKc_Tie1 Catalytic do 100.0 1.9E-39 4.1E-44 339.1 30.3 276 365-650 2-278 (297)
84 cd05065 PTKc_EphR_B Catalytic 100.0 1.6E-39 3.4E-44 334.2 28.7 263 364-647 3-268 (269)
85 KOG2052|consensus 100.0 2.2E-40 4.7E-45 340.0 21.7 264 354-650 201-506 (513)
86 KOG0605|consensus 100.0 2E-40 4.4E-45 348.2 21.9 263 357-646 133-448 (550)
87 cd05116 PTKc_Syk Catalytic dom 100.0 1.6E-39 3.5E-44 332.0 28.0 251 372-646 2-254 (257)
88 cd05066 PTKc_EphR_A Catalytic 100.0 1.8E-39 3.9E-44 333.5 28.5 263 364-647 3-266 (267)
89 cd05051 PTKc_DDR Catalytic dom 100.0 1.1E-39 2.3E-44 340.0 27.0 275 362-645 2-295 (296)
90 cd05088 PTKc_Tie2 Catalytic do 100.0 2E-39 4.3E-44 340.1 28.6 278 363-650 5-283 (303)
91 PTZ00426 cAMP-dependent protei 100.0 3.9E-40 8.4E-45 351.2 23.6 254 361-645 26-286 (340)
92 cd05057 PTKc_EGFR_like Catalyt 100.0 3.2E-39 6.8E-44 333.9 29.6 268 362-650 4-271 (279)
93 KOG0578|consensus 100.0 9.2E-41 2E-45 353.4 17.9 254 363-646 271-526 (550)
94 cd06649 PKc_MEK2 Catalytic dom 100.0 2.1E-39 4.7E-44 344.3 28.6 257 362-648 2-306 (331)
95 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.7E-39 3.8E-44 331.8 26.7 253 364-644 3-255 (256)
96 KOG0582|consensus 100.0 8.6E-40 1.9E-44 335.9 24.3 262 361-646 22-296 (516)
97 cd05571 STKc_PKB Catalytic dom 100.0 3.2E-40 6.8E-45 349.5 21.7 246 371-645 1-253 (323)
98 KOG0659|consensus 100.0 2.7E-40 5.9E-45 319.5 19.0 252 366-645 3-283 (318)
99 cd05056 PTKc_FAK Catalytic dom 100.0 3.6E-39 7.8E-44 331.7 28.7 267 361-650 2-268 (270)
100 KOG0580|consensus 100.0 1E-40 2.2E-45 318.2 15.8 259 361-648 18-278 (281)
101 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.1E-39 2.5E-44 333.3 24.2 259 361-646 2-260 (261)
102 cd05060 PTKc_Syk_like Catalyti 100.0 3.8E-39 8.3E-44 329.0 27.7 255 371-648 1-256 (257)
103 cd05631 STKc_GRK4 Catalytic do 100.0 1.5E-39 3.2E-44 338.0 25.0 251 367-645 2-263 (285)
104 cd05059 PTKc_Tec_like Catalyti 100.0 2.2E-39 4.8E-44 330.8 25.5 253 364-644 3-255 (256)
105 PTZ00267 NIMA-related protein 100.0 3.5E-39 7.5E-44 359.3 29.1 257 366-644 68-324 (478)
106 PTZ00283 serine/threonine prot 100.0 3.5E-39 7.6E-44 359.9 28.9 263 361-645 28-299 (496)
107 KOG0611|consensus 100.0 1.3E-40 2.8E-45 336.5 15.5 250 365-645 53-305 (668)
108 cd00192 PTKc Catalytic domain 100.0 5.2E-39 1.1E-43 327.1 27.5 261 371-644 1-261 (262)
109 cd05071 PTKc_Src Catalytic dom 100.0 7E-39 1.5E-43 328.5 28.2 259 361-647 2-260 (262)
110 KOG0201|consensus 100.0 3E-41 6.5E-46 346.6 10.4 252 366-645 14-265 (467)
111 cd05110 PTKc_HER4 Catalytic do 100.0 6.4E-39 1.4E-43 336.2 28.1 268 362-650 4-271 (303)
112 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.6E-39 3.5E-44 345.4 23.7 250 365-645 1-259 (333)
113 cd05585 STKc_YPK1_like Catalyt 100.0 1.1E-39 2.4E-44 343.6 22.3 244 373-645 1-249 (312)
114 cd05085 PTKc_Fer Catalytic dom 100.0 1E-38 2.2E-43 324.2 28.6 248 372-645 2-249 (250)
115 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.6E-39 1.2E-43 328.4 26.6 258 361-646 2-259 (260)
116 cd05042 PTKc_Aatyk Catalytic d 100.0 7.4E-39 1.6E-43 329.2 27.5 254 372-644 2-267 (269)
117 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.9E-39 4.2E-44 337.6 23.3 253 365-645 5-287 (288)
118 cd05595 STKc_PKB_beta Catalyti 100.0 1.5E-39 3.2E-44 344.4 22.5 246 371-645 1-253 (323)
119 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.5E-39 1.4E-43 327.9 26.4 258 361-646 2-259 (260)
120 cd05593 STKc_PKB_gamma Catalyt 100.0 1.7E-39 3.7E-44 344.7 22.5 246 371-645 1-253 (328)
121 cd05047 PTKc_Tie Catalytic dom 100.0 1.4E-38 3.1E-43 327.5 28.8 267 372-648 2-269 (270)
122 PLN00034 mitogen-activated pro 100.0 4.2E-39 9.1E-44 345.1 25.7 254 363-648 72-333 (353)
123 KOG0694|consensus 100.0 1E-39 2.3E-44 351.5 20.8 255 361-645 364-626 (694)
124 cd05584 STKc_p70S6K Catalytic 100.0 2.2E-39 4.8E-44 343.0 23.1 249 371-645 2-258 (323)
125 cd05044 PTKc_c-ros Catalytic d 100.0 5.1E-39 1.1E-43 330.0 24.9 261 372-645 2-268 (269)
126 cd05046 PTK_CCK4 Pseudokinase 100.0 9E-39 1.9E-43 329.5 26.8 271 363-645 3-274 (275)
127 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-38 2.7E-43 324.9 27.3 253 362-646 3-255 (256)
128 KOG0585|consensus 100.0 1.2E-39 2.6E-44 336.6 19.7 257 363-647 95-376 (576)
129 cd06650 PKc_MEK1 Catalytic dom 100.0 9.3E-39 2E-43 339.7 27.2 256 362-647 2-303 (333)
130 cd05069 PTKc_Yes Catalytic dom 100.0 2E-38 4.3E-43 324.5 28.4 258 361-646 2-259 (260)
131 cd05082 PTKc_Csk Catalytic dom 100.0 1.4E-38 3.1E-43 324.6 27.1 251 363-646 4-255 (256)
132 cd05034 PTKc_Src_like Catalyti 100.0 1.8E-38 3.8E-43 324.5 27.3 259 361-646 2-260 (261)
133 cd07848 STKc_CDKL5 Catalytic d 100.0 4.5E-39 9.8E-44 334.0 22.2 254 365-645 1-286 (287)
134 cd07862 STKc_CDK6 Catalytic do 100.0 8.1E-39 1.8E-43 332.6 24.1 254 365-645 1-289 (290)
135 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.9E-38 6.2E-43 325.0 27.8 256 371-645 1-268 (269)
136 cd05589 STKc_PKN Catalytic dom 100.0 8E-39 1.7E-43 338.8 24.3 249 367-645 1-259 (324)
137 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.1E-38 6.7E-43 324.9 27.8 265 367-647 1-272 (273)
138 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.7E-38 5.9E-43 327.6 27.5 259 367-648 6-282 (283)
139 cd05073 PTKc_Hck Catalytic dom 100.0 4E-38 8.7E-43 322.2 28.3 258 361-646 2-259 (260)
140 cd05594 STKc_PKB_alpha Catalyt 100.0 3.6E-39 7.8E-44 341.6 20.2 246 371-645 1-254 (325)
141 cd05041 PTKc_Fes_like Catalyti 100.0 4.2E-38 9.2E-43 319.8 27.2 250 371-645 1-250 (251)
142 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.6E-38 3.5E-43 333.0 24.8 255 364-646 4-291 (303)
143 cd05587 STKc_cPKC Catalytic do 100.0 1.1E-38 2.4E-43 337.8 23.7 251 366-645 1-259 (324)
144 cd05590 STKc_nPKC_eta Catalyti 100.0 6.9E-39 1.5E-43 338.8 22.1 246 371-645 1-255 (320)
145 cd05628 STKc_NDR1 Catalytic do 100.0 1.6E-38 3.5E-43 341.9 25.2 255 365-645 1-295 (363)
146 cd05591 STKc_nPKC_epsilon Cata 100.0 8.3E-39 1.8E-43 338.2 22.6 246 371-645 1-256 (321)
147 cd05592 STKc_nPKC_theta_delta 100.0 1.1E-38 2.3E-43 336.7 23.4 246 371-645 1-250 (316)
148 cd05112 PTKc_Itk Catalytic dom 100.0 5.4E-38 1.2E-42 320.0 27.7 253 364-644 3-255 (256)
149 cd08529 STKc_FA2-like Catalyti 100.0 3.6E-38 7.8E-43 320.8 26.3 254 366-645 1-255 (256)
150 cd05596 STKc_ROCK Catalytic do 100.0 9.8E-39 2.1E-43 344.4 23.3 260 358-645 36-306 (370)
151 cd08219 STKc_Nek3 Catalytic do 100.0 3.5E-38 7.6E-43 321.4 26.1 252 366-643 1-252 (255)
152 cd08228 STKc_Nek6 Catalytic do 100.0 4.1E-38 9E-43 322.9 26.6 260 365-648 2-266 (267)
153 cd05040 PTKc_Ack_like Catalyti 100.0 6E-38 1.3E-42 319.8 27.5 254 371-645 1-256 (257)
154 cd05599 STKc_NDR_like Catalyti 100.0 9.2E-39 2E-43 343.7 22.6 254 365-645 1-298 (364)
155 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.2E-38 1.1E-42 323.1 27.3 254 372-645 2-267 (268)
156 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.8E-39 1.3E-43 343.1 20.4 254 365-645 1-287 (350)
157 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 5.7E-38 1.2E-42 325.5 27.1 263 365-647 4-283 (284)
158 smart00219 TyrKc Tyrosine kina 100.0 6E-38 1.3E-42 319.1 26.7 257 368-644 2-258 (258)
159 cd05616 STKc_cPKC_beta Catalyt 100.0 1.9E-38 4.1E-43 335.8 23.9 250 366-644 1-258 (323)
160 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.3E-38 4.9E-43 336.6 24.5 254 366-646 1-293 (338)
161 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 9.5E-38 2.1E-42 323.5 28.6 262 364-647 3-283 (284)
162 cd05614 STKc_MSK2_N N-terminal 100.0 1.7E-38 3.7E-43 337.3 23.3 255 366-645 1-269 (332)
163 cd05626 STKc_LATS2 Catalytic d 100.0 2.5E-38 5.3E-43 342.7 24.5 254 366-645 2-307 (381)
164 cd05620 STKc_nPKC_delta Cataly 100.0 1.8E-38 3.9E-43 335.0 22.7 246 371-645 1-250 (316)
165 cd05601 STKc_CRIK Catalytic do 100.0 7.6E-39 1.6E-43 339.7 20.0 254 365-645 1-265 (330)
166 cd05629 STKc_NDR_like_fungal C 100.0 1.5E-38 3.3E-43 343.9 22.6 254 365-645 1-307 (377)
167 cd05582 STKc_RSK_N N-terminal 100.0 6.2E-39 1.3E-43 338.7 18.8 249 371-645 2-256 (318)
168 cd05570 STKc_PKC Catalytic dom 100.0 2.3E-38 4.9E-43 334.5 23.1 246 371-645 1-254 (318)
169 cd05619 STKc_nPKC_theta Cataly 100.0 2.2E-38 4.8E-43 334.3 22.9 246 371-645 1-250 (316)
170 cd05605 STKc_GRK4_like Catalyt 100.0 3.2E-38 7E-43 327.9 23.6 253 366-646 1-264 (285)
171 cd05575 STKc_SGK Catalytic dom 100.0 1.8E-38 4E-43 335.9 21.9 246 371-645 1-253 (323)
172 cd06625 STKc_MEKK3_like Cataly 100.0 9.2E-38 2E-42 319.4 25.5 255 365-645 2-262 (263)
173 cd05083 PTKc_Chk Catalytic dom 100.0 1E-37 2.2E-42 318.0 25.7 247 365-645 6-252 (254)
174 cd05608 STKc_GRK1 Catalytic do 100.0 6E-38 1.3E-42 325.0 24.0 249 373-646 1-260 (280)
175 cd05621 STKc_ROCK2 Catalytic d 100.0 2.9E-38 6.4E-43 340.6 22.5 262 357-646 35-307 (370)
176 cd05588 STKc_aPKC Catalytic do 100.0 3.4E-38 7.4E-43 334.8 22.6 246 371-645 1-264 (329)
177 cd05615 STKc_cPKC_alpha Cataly 100.0 6.8E-38 1.5E-42 331.6 24.4 250 366-644 1-258 (323)
178 cd05625 STKc_LATS1 Catalytic d 100.0 4.3E-38 9.3E-43 341.0 23.2 253 366-645 2-307 (382)
179 cd08221 STKc_Nek9 Catalytic do 100.0 2.2E-37 4.7E-42 315.5 27.0 254 366-645 1-255 (256)
180 KOG0589|consensus 100.0 9.1E-39 2E-43 336.7 17.2 256 365-646 4-261 (426)
181 cd05598 STKc_LATS Catalytic do 100.0 2.6E-38 5.6E-43 341.9 21.1 254 365-645 1-303 (376)
182 cd05622 STKc_ROCK1 Catalytic d 100.0 7E-38 1.5E-42 337.9 24.1 262 357-646 35-307 (371)
183 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.8E-37 8.2E-42 315.3 28.3 260 365-648 2-266 (267)
184 cd07872 STKc_PCTAIRE2 Catalyti 100.0 9.5E-38 2E-42 328.1 24.5 254 365-646 6-289 (309)
185 PHA03212 serine/threonine kina 100.0 9.6E-38 2.1E-42 338.8 25.2 251 362-646 89-379 (391)
186 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.7E-37 3.7E-42 320.7 25.7 245 372-644 2-273 (274)
187 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.1E-37 4.6E-42 317.7 26.2 246 371-644 1-261 (262)
188 cd08223 STKc_Nek4 Catalytic do 100.0 2.6E-37 5.7E-42 314.9 26.4 254 366-645 1-256 (257)
189 cd05618 STKc_aPKC_iota Catalyt 100.0 5.4E-38 1.2E-42 333.3 22.0 246 371-645 1-264 (329)
190 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.4E-37 5.2E-42 319.7 26.1 262 365-647 4-283 (284)
191 cd05602 STKc_SGK1 Catalytic do 100.0 5.3E-38 1.2E-42 332.7 21.4 245 371-644 1-252 (325)
192 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.4E-37 5.3E-42 315.3 24.9 244 371-644 1-258 (259)
193 cd05604 STKc_SGK3 Catalytic do 100.0 4.3E-38 9.4E-43 333.3 20.1 245 371-644 1-252 (325)
194 cd06615 PKc_MEK Catalytic doma 100.0 3.5E-37 7.5E-42 323.9 26.8 254 365-648 1-292 (308)
195 cd06646 STKc_MAP4K5 Catalytic 100.0 9E-38 1.9E-42 320.6 21.7 253 364-645 8-267 (267)
196 cd05603 STKc_SGK2 Catalytic do 100.0 6.5E-38 1.4E-42 331.3 21.2 246 371-645 1-253 (321)
197 cd06609 STKc_MST3_like Catalyt 100.0 2.1E-37 4.6E-42 319.2 24.4 254 365-647 1-255 (274)
198 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.5E-37 5.5E-42 317.0 24.8 253 367-645 2-266 (267)
199 cd05607 STKc_GRK7 Catalytic do 100.0 2E-37 4.4E-42 320.5 24.2 246 373-645 1-256 (277)
200 cd05597 STKc_DMPK_like Catalyt 100.0 1.8E-37 3.9E-42 329.6 24.3 255 365-645 1-268 (331)
201 cd06619 PKc_MKK5 Catalytic dom 100.0 2.3E-37 4.9E-42 320.3 24.4 248 365-646 1-256 (279)
202 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.3E-37 2.8E-42 321.6 22.2 252 366-646 5-256 (277)
203 cd07853 STKc_NLK Catalytic dom 100.0 1.9E-37 4.1E-42 334.7 24.3 253 366-646 1-291 (372)
204 cd05627 STKc_NDR2 Catalytic do 100.0 8.3E-38 1.8E-42 336.0 21.2 254 365-645 1-295 (360)
205 cd08218 STKc_Nek1 Catalytic do 100.0 3.9E-37 8.5E-42 313.6 25.0 254 366-645 1-255 (256)
206 KOG0033|consensus 100.0 2.6E-39 5.7E-44 308.7 7.9 254 365-647 11-271 (355)
207 cd06640 STKc_MST4 Catalytic do 100.0 3.8E-37 8.3E-42 318.1 24.8 253 366-647 5-257 (277)
208 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.8E-37 3.8E-42 317.2 21.9 246 371-644 1-257 (258)
209 PTZ00036 glycogen synthase kin 100.0 3.2E-37 6.9E-42 339.8 25.6 255 361-646 62-354 (440)
210 PF00069 Pkinase: Protein kina 100.0 1.1E-37 2.3E-42 317.8 20.2 251 367-645 1-259 (260)
211 PHA03211 serine/threonine kina 100.0 2.8E-37 6.2E-42 340.0 24.8 251 364-646 168-458 (461)
212 cd06611 STKc_SLK_like Catalyti 100.0 2.7E-37 5.8E-42 319.5 23.0 256 363-646 3-265 (280)
213 cd06637 STKc_TNIK Catalytic do 100.0 2.6E-37 5.6E-42 317.8 22.8 256 362-645 3-271 (272)
214 cd05623 STKc_MRCK_alpha Cataly 100.0 2.5E-37 5.5E-42 328.5 23.4 255 365-645 1-268 (332)
215 cd05586 STKc_Sck1_like Catalyt 100.0 6.7E-38 1.4E-42 332.6 18.9 245 373-645 1-255 (330)
216 cd05617 STKc_aPKC_zeta Catalyt 100.0 2E-37 4.3E-42 328.7 22.2 246 371-645 1-262 (327)
217 cd05630 STKc_GRK6 Catalytic do 100.0 4E-37 8.7E-42 319.8 24.1 254 367-647 2-265 (285)
218 cd08229 STKc_Nek7 Catalytic do 100.0 5.1E-37 1.1E-41 314.8 24.5 260 365-648 2-266 (267)
219 cd07876 STKc_JNK2 Catalytic do 100.0 6.5E-37 1.4E-41 328.9 26.1 251 364-646 20-318 (359)
220 KOG0663|consensus 100.0 7.2E-38 1.6E-42 311.1 17.0 254 364-645 75-363 (419)
221 cd06654 STKc_PAK1 Catalytic do 100.0 9.8E-37 2.1E-41 318.6 26.5 253 364-646 19-273 (296)
222 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.7E-37 1.2E-41 320.9 24.7 254 365-646 6-289 (301)
223 PHA03207 serine/threonine kina 100.0 1.3E-36 2.8E-41 330.5 28.3 256 362-648 89-380 (392)
224 cd06624 STKc_ASK Catalytic dom 100.0 8.5E-37 1.8E-41 313.7 25.2 258 360-645 3-267 (268)
225 cd06613 STKc_MAP4K3_like Catal 100.0 7.7E-37 1.7E-41 312.2 24.7 254 363-644 1-261 (262)
226 cd05624 STKc_MRCK_beta Catalyt 100.0 2.9E-37 6.3E-42 328.0 22.3 255 365-645 1-268 (331)
227 cd06643 STKc_SLK Catalytic dom 100.0 6.8E-37 1.5E-41 317.0 24.4 251 367-645 7-264 (282)
228 cd05632 STKc_GRK5 Catalytic do 100.0 1.2E-36 2.7E-41 316.0 26.2 251 367-645 2-263 (285)
229 cd06641 STKc_MST3 Catalytic do 100.0 1.6E-36 3.4E-41 313.6 26.7 253 366-647 5-257 (277)
230 cd08220 STKc_Nek8 Catalytic do 100.0 1.1E-36 2.5E-41 309.8 25.2 252 366-644 1-254 (256)
231 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.1E-37 6.7E-42 320.0 21.3 255 364-648 4-271 (284)
232 cd06631 STKc_YSK4 Catalytic do 100.0 1E-36 2.2E-41 312.5 24.7 253 366-645 1-264 (265)
233 cd08217 STKc_Nek2 Catalytic do 100.0 1.3E-36 2.8E-41 310.3 25.3 256 366-645 1-264 (265)
234 cd06612 STKc_MST1_2 Catalytic 100.0 6.9E-37 1.5E-41 311.4 23.0 252 364-645 2-255 (256)
235 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.6E-37 1.4E-41 317.6 23.2 257 365-648 1-267 (286)
236 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.5E-36 3.3E-41 310.6 25.2 258 365-645 1-266 (267)
237 cd06655 STKc_PAK2 Catalytic do 100.0 2.3E-36 4.9E-41 315.9 27.0 255 363-647 17-273 (296)
238 KOG0032|consensus 100.0 6E-37 1.3E-41 327.0 22.9 252 364-645 34-295 (382)
239 cd07839 STKc_CDK5 Catalytic do 100.0 3.6E-37 7.8E-42 319.1 20.6 253 366-645 1-283 (284)
240 cd05609 STKc_MAST Catalytic do 100.0 1.9E-36 4.2E-41 317.6 26.4 255 365-645 1-275 (305)
241 cd07875 STKc_JNK1 Catalytic do 100.0 7.9E-37 1.7E-41 328.8 24.0 251 364-646 23-321 (364)
242 cd06605 PKc_MAPKK Catalytic do 100.0 6.4E-37 1.4E-41 313.5 22.1 253 365-646 1-260 (265)
243 cd07874 STKc_JNK3 Catalytic do 100.0 9.3E-37 2E-41 327.1 24.3 251 364-646 16-314 (355)
244 cd06645 STKc_MAP4K3 Catalytic 100.0 4.2E-37 9E-42 315.6 20.7 254 363-645 7-267 (267)
245 cd06644 STKc_STK10_LOK Catalyt 100.0 1.6E-36 3.5E-41 315.9 25.4 256 362-645 9-271 (292)
246 cd08227 PK_STRAD_alpha Pseudok 100.0 1.2E-36 2.6E-41 322.5 24.8 254 369-646 2-310 (327)
247 cd06638 STKc_myosinIIIA Cataly 100.0 1.5E-36 3.2E-41 314.7 25.0 263 357-645 10-285 (286)
248 KOG0594|consensus 100.0 2.2E-37 4.8E-42 313.4 18.1 255 365-644 11-303 (323)
249 cd05580 STKc_PKA Catalytic dom 100.0 1.9E-36 4.2E-41 315.2 25.7 249 365-645 1-256 (290)
250 cd07863 STKc_CDK4 Catalytic do 100.0 8.4E-37 1.8E-41 316.9 22.8 252 366-645 1-287 (288)
251 PRK13184 pknD serine/threonine 100.0 2.4E-36 5.2E-41 347.4 28.3 269 365-648 2-291 (932)
252 cd07861 STKc_CDK1_euk Catalyti 100.0 1.2E-36 2.6E-41 315.1 23.3 254 366-645 1-284 (285)
253 cd06651 STKc_MEKK3 Catalytic d 100.0 2.1E-36 4.6E-41 310.5 24.8 254 365-645 2-263 (266)
254 cd06639 STKc_myosinIIIB Cataly 100.0 3.6E-36 7.8E-41 313.0 26.7 262 358-645 15-289 (291)
255 PHA03209 serine/threonine kina 100.0 2.4E-36 5.1E-41 324.4 25.9 250 362-646 63-354 (357)
256 cd06623 PKc_MAPKK_plant_like C 100.0 4.2E-36 9E-41 306.8 26.4 254 365-646 1-259 (264)
257 cd06632 STKc_MEKK1_plant Catal 100.0 2.4E-36 5.3E-41 307.5 24.4 250 367-645 2-257 (258)
258 KOG0660|consensus 100.0 4.4E-37 9.4E-42 310.2 18.3 253 366-645 23-312 (359)
259 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.3E-36 4.9E-41 311.0 24.2 254 366-645 2-271 (272)
260 cd06917 STKc_NAK1_like Catalyt 100.0 2E-36 4.4E-41 312.2 23.8 252 366-646 2-258 (277)
261 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.4E-36 5.2E-41 312.8 24.4 253 365-645 1-285 (286)
262 PTZ00266 NIMA-related protein 100.0 3.4E-36 7.3E-41 347.4 28.0 263 357-645 5-297 (1021)
263 cd06656 STKc_PAK3 Catalytic do 100.0 1.7E-36 3.7E-41 316.9 23.1 253 364-646 18-272 (297)
264 cd06652 STKc_MEKK2 Catalytic d 100.0 4.2E-36 9.2E-41 308.0 25.5 254 365-645 2-263 (265)
265 KOG0610|consensus 100.0 9.2E-37 2E-41 311.4 20.2 260 361-645 73-394 (459)
266 KOG0658|consensus 100.0 3.2E-37 6.9E-42 311.7 16.6 249 366-645 25-308 (364)
267 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 7.3E-36 1.6E-40 310.3 27.2 256 365-646 1-269 (287)
268 cd05574 STKc_phototropin_like 100.0 5.1E-36 1.1E-40 315.8 26.3 258 365-646 1-292 (316)
269 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.7E-36 7.9E-41 311.1 24.7 258 365-648 1-266 (283)
270 cd06626 STKc_MEKK4 Catalytic d 100.0 7.3E-36 1.6E-40 305.3 25.6 254 366-645 1-263 (264)
271 cd07832 STKc_CCRK Catalytic do 100.0 4.5E-36 9.7E-41 310.8 24.3 253 366-645 1-284 (286)
272 cd05572 STKc_cGK_PKG Catalytic 100.0 5.1E-36 1.1E-40 306.7 24.4 245 373-646 1-255 (262)
273 cd08225 STKc_Nek5 Catalytic do 100.0 4.2E-36 9.2E-41 305.8 23.7 254 366-645 1-256 (257)
274 cd08528 STKc_Nek10 Catalytic d 100.0 8.1E-36 1.8E-40 306.4 25.2 256 366-645 1-268 (269)
275 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.4E-36 7.3E-41 311.6 22.5 259 359-645 10-281 (282)
276 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.5E-36 5.5E-41 322.1 21.7 250 365-647 15-302 (343)
277 cd06658 STKc_PAK5 Catalytic do 100.0 2.7E-36 5.8E-41 314.8 21.2 252 366-647 23-276 (292)
278 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.3E-36 7.2E-41 311.9 21.3 253 365-645 1-285 (286)
279 KOG0599|consensus 100.0 5.2E-37 1.1E-41 296.9 13.8 253 367-648 19-288 (411)
280 cd05578 STKc_Yank1 Catalytic d 100.0 3E-36 6.6E-41 307.6 20.3 249 366-644 1-256 (258)
281 cd06607 STKc_TAO Catalytic dom 100.0 1.3E-35 2.9E-40 311.5 25.6 253 363-647 13-271 (307)
282 cd07868 STKc_CDK8 Catalytic do 100.0 6.7E-36 1.4E-40 315.0 23.4 256 371-645 7-316 (317)
283 PTZ00284 protein kinase; Provi 100.0 8.8E-36 1.9E-40 331.3 25.4 254 360-647 124-442 (467)
284 cd06608 STKc_myosinIII_like Ca 100.0 9.9E-36 2.2E-40 305.7 23.9 258 362-645 3-274 (275)
285 KOG0577|consensus 100.0 2.8E-37 6.1E-42 324.6 12.5 249 366-647 27-282 (948)
286 KOG2345|consensus 100.0 4.9E-37 1.1E-41 294.2 12.9 266 360-648 16-301 (302)
287 cd05122 PKc_STE Catalytic doma 100.0 2.1E-35 4.6E-40 298.3 25.3 251 366-645 1-253 (253)
288 KOG1989|consensus 100.0 3.9E-36 8.4E-41 333.7 21.5 263 358-649 30-313 (738)
289 cd08215 STKc_Nek Catalytic dom 100.0 2.3E-35 4.9E-40 299.6 25.4 256 366-645 1-257 (258)
290 cd07844 STKc_PCTAIRE_like Cata 100.0 9.6E-36 2.1E-40 309.6 22.9 253 365-645 5-290 (291)
291 cd06648 STKc_PAK_II Catalytic 100.0 2.1E-35 4.6E-40 306.7 25.3 251 366-646 20-272 (285)
292 cd06659 STKc_PAK6 Catalytic do 100.0 6.4E-36 1.4E-40 312.7 21.4 253 367-649 23-277 (297)
293 cd07841 STKc_CDK7 Catalytic do 100.0 1.7E-35 3.7E-40 308.8 24.3 253 366-646 1-285 (298)
294 cd08530 STKc_CNK2-like Catalyt 100.0 1.5E-35 3.3E-40 301.2 23.2 253 366-644 1-254 (256)
295 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.9E-35 4.1E-40 307.5 24.1 254 364-645 4-290 (291)
296 cd07831 STKc_MOK Catalytic dom 100.0 2E-35 4.4E-40 305.2 24.0 249 367-645 1-281 (282)
297 cd06635 STKc_TAO1 Catalytic do 100.0 3.1E-35 6.8E-40 310.3 25.9 252 365-648 25-282 (317)
298 cd06614 STKc_PAK Catalytic dom 100.0 2.5E-35 5.5E-40 305.8 24.6 256 363-647 17-274 (286)
299 cd07860 STKc_CDK2_3 Catalytic 100.0 1.1E-35 2.4E-40 307.9 21.7 253 366-645 1-283 (284)
300 KOG0667|consensus 100.0 6.8E-36 1.5E-40 322.2 20.6 250 366-647 187-506 (586)
301 cd06630 STKc_MEKK1 Catalytic d 100.0 1.8E-35 3.8E-40 303.3 22.4 253 367-645 2-266 (268)
302 KOG4279|consensus 100.0 1.4E-36 3.1E-41 323.8 14.3 246 372-645 582-834 (1226)
303 cd07867 STKc_CDC2L6 Catalytic 100.0 2.6E-35 5.6E-40 310.3 23.8 256 371-645 7-316 (317)
304 cd07833 STKc_CDKL Catalytic do 100.0 2.5E-35 5.4E-40 305.5 22.7 254 365-645 1-287 (288)
305 cd06606 STKc_MAPKKK Catalytic 100.0 7.4E-35 1.6E-39 295.6 25.6 254 366-645 1-259 (260)
306 cd05579 STKc_MAST_like Catalyt 100.0 2E-35 4.4E-40 301.4 21.6 246 373-645 1-259 (265)
307 cd06653 STKc_MEKK3_like_1 Cata 100.0 7.7E-35 1.7E-39 298.6 25.7 254 365-645 2-263 (264)
308 cd06647 STKc_PAK_I Catalytic d 100.0 3.3E-35 7.1E-40 306.6 23.3 254 364-647 18-273 (293)
309 cd07836 STKc_Pho85 Catalytic d 100.0 3.7E-35 8E-40 303.8 23.3 254 366-645 1-283 (284)
310 cd07849 STKc_ERK1_2_like Catal 100.0 3.3E-35 7.2E-40 312.7 23.6 254 364-645 4-294 (336)
311 cd05577 STKc_GRK Catalytic dom 100.0 4.3E-35 9.3E-40 302.8 23.4 246 373-646 1-257 (277)
312 PHA03210 serine/threonine kina 100.0 4.6E-35 1E-39 327.6 25.4 264 364-646 147-457 (501)
313 cd07845 STKc_CDK10 Catalytic d 100.0 4.7E-35 1E-39 307.6 23.9 257 363-647 5-294 (309)
314 cd06616 PKc_MKK4 Catalytic dom 100.0 2.2E-35 4.8E-40 306.4 20.9 257 365-646 4-270 (288)
315 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-34 2.5E-39 294.2 25.6 251 366-644 1-252 (254)
316 KOG0574|consensus 100.0 9.5E-38 2.1E-42 305.3 2.7 250 366-645 34-285 (502)
317 cd06618 PKc_MKK7 Catalytic dom 100.0 8.6E-35 1.9E-39 303.6 25.1 258 361-647 11-277 (296)
318 cd05633 STKc_GRK3 Catalytic do 100.0 5.4E-35 1.2E-39 302.8 23.3 245 372-646 1-258 (279)
319 KOG0579|consensus 100.0 9.6E-37 2.1E-41 322.1 10.3 253 365-645 32-291 (1187)
320 cd05611 STKc_Rim15_like Cataly 100.0 8.3E-35 1.8E-39 297.4 24.0 245 371-647 2-255 (260)
321 cd05581 STKc_PDK1 Catalytic do 100.0 4.2E-35 9.1E-40 302.1 21.6 254 365-645 1-279 (280)
322 cd07843 STKc_CDC2L1 Catalytic 100.0 4.4E-35 9.5E-40 305.1 21.7 253 365-645 5-292 (293)
323 cd07840 STKc_CDK9_like Catalyt 100.0 8.7E-35 1.9E-39 300.8 23.4 252 367-645 1-286 (287)
324 cd08222 STKc_Nek11 Catalytic d 100.0 5.8E-35 1.3E-39 298.5 21.5 258 366-645 1-259 (260)
325 cd07837 STKc_CdkB_plant Cataly 100.0 1.4E-34 3.1E-39 301.2 24.7 257 365-645 1-293 (295)
326 PLN00113 leucine-rich repeat r 100.0 6.4E-35 1.4E-39 352.3 25.3 243 366-649 691-953 (968)
327 cd07865 STKc_CDK9 Catalytic do 100.0 1.2E-34 2.5E-39 303.8 24.0 255 365-645 12-309 (310)
328 cd07850 STKc_JNK Catalytic dom 100.0 2.2E-34 4.7E-39 308.6 25.7 251 364-646 15-314 (353)
329 cd06634 STKc_TAO2 Catalytic do 100.0 1.1E-34 2.4E-39 304.9 22.9 253 364-648 14-272 (308)
330 cd07864 STKc_CDK12 Catalytic d 100.0 7.5E-35 1.6E-39 304.4 21.5 257 362-645 4-301 (302)
331 PHA02882 putative serine/threo 100.0 3.5E-34 7.7E-39 299.1 26.6 258 361-644 8-293 (294)
332 PLN00009 cyclin-dependent kina 100.0 2.9E-34 6.3E-39 299.1 25.7 255 365-646 2-287 (294)
333 KOG4717|consensus 100.0 2.4E-35 5.1E-40 305.9 16.8 251 366-645 19-272 (864)
334 cd06657 STKc_PAK4 Catalytic do 100.0 3.2E-34 6.9E-39 299.2 25.5 248 370-647 25-274 (292)
335 cd07835 STKc_CDK1_like Catalyt 100.0 9.5E-35 2.1E-39 300.7 21.2 252 367-645 1-282 (283)
336 cd08226 PK_STRAD_beta Pseudoki 100.0 2.1E-34 4.5E-39 305.5 24.0 251 372-646 5-311 (328)
337 KOG0690|consensus 100.0 2.5E-35 5.5E-40 291.1 15.4 256 361-645 164-426 (516)
338 cd05606 STKc_beta_ARK Catalyti 100.0 3.4E-34 7.5E-39 296.6 24.2 244 372-646 1-258 (278)
339 cd07842 STKc_CDK8_like Catalyt 100.0 2.1E-34 4.5E-39 302.9 22.9 260 366-645 1-315 (316)
340 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.9E-34 4.1E-39 307.1 22.8 253 365-646 5-294 (337)
341 cd05583 STKc_MSK_N N-terminal 100.0 4.1E-34 8.8E-39 297.1 24.5 254 366-644 1-267 (288)
342 KOG0586|consensus 100.0 4.7E-35 1E-39 312.7 17.4 254 363-646 54-309 (596)
343 cd06633 STKc_TAO3 Catalytic do 100.0 6.8E-34 1.5E-38 299.6 26.1 247 367-645 23-275 (313)
344 cd05613 STKc_MSK1_N N-terminal 100.0 4.6E-34 9.9E-39 297.0 24.4 255 366-645 1-270 (290)
345 PHA03390 pk1 serine/threonine- 100.0 2.8E-34 6.1E-39 295.5 22.4 240 366-645 15-264 (267)
346 cd05123 STKc_AGC Catalytic dom 100.0 3.3E-34 7.3E-39 290.5 22.1 244 373-645 1-249 (250)
347 cd05118 STKc_CMGC Catalytic do 100.0 2.4E-34 5.3E-39 297.1 21.4 251 367-645 1-282 (283)
348 KOG0986|consensus 100.0 2.6E-35 5.6E-40 302.6 13.6 257 360-644 180-447 (591)
349 KOG0596|consensus 100.0 5.7E-35 1.2E-39 306.6 16.1 260 359-646 355-630 (677)
350 cd07855 STKc_ERK5 Catalytic do 100.0 3.2E-34 6.9E-39 304.9 22.1 256 365-647 5-298 (334)
351 cd07830 STKc_MAK_like Catalyti 100.0 3.3E-34 7.2E-39 296.5 21.5 251 367-645 1-282 (283)
352 cd07467 CRD_TK_ROR1 Cysteine-r 100.0 1.4E-35 3.1E-40 263.5 9.0 138 31-178 1-139 (142)
353 KOG1035|consensus 100.0 5.3E-35 1.1E-39 330.4 15.7 249 365-643 479-871 (1351)
354 cd07838 STKc_CDK4_6_like Catal 100.0 1E-33 2.2E-38 293.0 24.3 251 367-645 1-286 (287)
355 cd07852 STKc_MAPK15 Catalytic 100.0 4E-34 8.6E-39 304.4 21.7 255 364-646 6-298 (337)
356 KOG0584|consensus 100.0 7.4E-35 1.6E-39 311.4 15.7 248 367-646 42-299 (632)
357 PTZ00024 cyclin-dependent prot 100.0 5.1E-34 1.1E-38 303.3 21.9 251 369-646 13-316 (335)
358 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.1E-33 2.4E-38 301.9 24.4 250 364-646 14-301 (343)
359 cd07834 STKc_MAPK Catalytic do 100.0 6.3E-34 1.4E-38 301.7 22.3 254 366-646 1-292 (330)
360 cd08216 PK_STRAD Pseudokinase 100.0 8.3E-34 1.8E-38 298.5 22.0 250 371-646 8-298 (314)
361 cd07879 STKc_p38delta_MAPK13 C 100.0 1.1E-33 2.4E-38 301.9 22.4 247 365-645 15-299 (342)
362 cd07829 STKc_CDK_like Catalyti 100.0 8.6E-34 1.9E-38 292.8 20.9 251 367-645 1-281 (282)
363 cd07857 STKc_MPK1 Catalytic do 100.0 3.2E-33 6.9E-38 296.9 25.5 256 366-646 1-295 (332)
364 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.3E-33 5E-38 299.8 24.4 252 362-646 14-303 (345)
365 KOG0983|consensus 100.0 2.1E-34 4.5E-39 279.1 14.7 257 361-646 88-352 (391)
366 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.4E-33 2.9E-38 301.2 22.6 253 365-646 5-303 (342)
367 KOG4645|consensus 100.0 1.4E-35 2.9E-40 336.5 7.4 254 366-645 1236-1496(1509)
368 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.8E-33 6.1E-38 297.0 24.5 252 362-646 7-291 (328)
369 cd07866 STKc_BUR1 Catalytic do 100.0 1.3E-33 2.9E-38 295.8 21.5 256 364-645 7-310 (311)
370 cd07851 STKc_p38 Catalytic dom 100.0 1.6E-33 3.4E-38 300.7 22.0 249 364-645 14-300 (343)
371 KOG0666|consensus 100.0 7E-35 1.5E-39 286.9 10.5 264 365-646 24-340 (438)
372 KOG0662|consensus 100.0 2E-34 4.2E-39 263.5 12.4 252 366-644 3-284 (292)
373 cd05610 STKc_MASTL Catalytic d 100.0 1.2E-32 2.7E-37 317.5 27.5 147 365-536 4-152 (669)
374 cd07468 CRD_TK_ROR2 Cysteine-r 100.0 1.8E-34 3.9E-39 255.9 8.9 136 31-176 1-137 (140)
375 KOG0607|consensus 100.0 1.9E-33 4.2E-38 277.5 13.5 248 371-646 84-364 (463)
376 cd05576 STKc_RPK118_like Catal 100.0 6.4E-33 1.4E-37 280.2 17.6 228 376-645 4-236 (237)
377 KOG0612|consensus 100.0 1.1E-33 2.3E-38 317.5 10.2 263 356-646 66-341 (1317)
378 KOG1006|consensus 100.0 2.6E-34 5.5E-39 277.7 4.5 261 360-645 59-329 (361)
379 KOG0696|consensus 100.0 7.5E-33 1.6E-37 280.9 15.1 247 361-636 345-594 (683)
380 smart00220 S_TKc Serine/Threon 100.0 1.1E-31 2.3E-36 269.1 22.5 240 377-645 1-243 (244)
381 KOG4250|consensus 100.0 2.9E-32 6.2E-37 294.9 16.6 256 367-648 15-311 (732)
382 KOG0604|consensus 100.0 1.1E-32 2.5E-37 270.3 12.1 252 364-648 60-327 (400)
383 PLN03225 Serine/threonine-prot 100.0 1.9E-31 4.1E-36 300.8 23.3 278 360-646 127-453 (566)
384 PLN03224 probable serine/threo 100.0 3.1E-31 6.7E-36 292.3 23.9 282 361-646 141-503 (507)
385 KOG0603|consensus 100.0 4E-32 8.7E-37 291.7 14.7 243 364-646 321-566 (612)
386 KOG0587|consensus 100.0 1.1E-31 2.5E-36 295.2 18.3 260 358-645 12-284 (953)
387 KOG0669|consensus 100.0 5.9E-33 1.3E-37 266.1 4.2 258 365-648 17-320 (376)
388 KOG0984|consensus 100.0 3.1E-31 6.8E-36 247.9 15.5 222 360-607 41-269 (282)
389 KOG0614|consensus 100.0 8.1E-32 1.7E-36 279.8 8.7 257 362-647 417-681 (732)
390 KOG4236|consensus 100.0 2.1E-31 4.5E-36 277.2 11.0 246 371-646 570-822 (888)
391 KOG1027|consensus 100.0 4.6E-31 9.9E-36 289.2 13.6 245 370-644 514-768 (903)
392 KOG1151|consensus 100.0 3.3E-31 7.2E-36 270.8 9.8 256 362-644 460-742 (775)
393 KOG0671|consensus 100.0 5.3E-31 1.2E-35 266.9 10.5 254 361-646 85-409 (415)
394 cd07459 CRD_TK_ROR_like Cystei 100.0 7.1E-30 1.5E-34 231.9 10.0 132 33-175 1-134 (135)
395 KOG0695|consensus 100.0 3.3E-29 7.2E-34 248.5 14.8 256 360-644 245-517 (593)
396 cd00180 PKc Catalytic domain o 100.0 5.1E-28 1.1E-32 236.1 22.0 213 373-644 1-215 (215)
397 KOG0608|consensus 100.0 3.2E-29 6.9E-34 265.8 14.3 258 361-645 625-930 (1034)
398 KOG0664|consensus 100.0 6E-30 1.3E-34 247.8 4.1 248 370-645 58-345 (449)
399 KOG0668|consensus 100.0 1.4E-28 3.1E-33 233.1 11.3 247 364-645 37-324 (338)
400 KOG1152|consensus 100.0 1.7E-28 3.6E-33 258.9 11.1 199 365-593 561-771 (772)
401 smart00221 STYKc Protein kinas 99.9 1.9E-26 4.1E-31 229.0 22.2 216 367-609 1-220 (225)
402 KOG0576|consensus 99.9 1.3E-28 2.9E-33 263.5 6.4 254 362-644 12-272 (829)
403 smart00130 KR Kringle domain. 99.9 2.9E-28 6.4E-33 202.4 6.9 82 186-267 2-83 (83)
404 cd00108 KR Kringle domain; Kri 99.9 3.3E-28 7.2E-33 202.2 6.9 82 185-266 2-83 (83)
405 KOG0665|consensus 99.9 1.7E-27 3.6E-32 236.5 11.7 247 365-644 17-311 (369)
406 KOG0670|consensus 99.9 3E-27 6.6E-32 246.4 9.2 257 360-646 427-749 (752)
407 KOG1290|consensus 99.9 2.3E-25 5E-30 231.6 18.4 135 361-521 74-221 (590)
408 PLN00181 protein SPA1-RELATED; 99.9 2.3E-26 5E-31 271.5 12.2 200 424-646 28-268 (793)
409 KOG1345|consensus 99.9 5.1E-26 1.1E-30 220.8 9.3 241 365-640 24-281 (378)
410 smart00750 KIND kinase non-cat 99.9 5.3E-25 1.2E-29 211.5 15.2 163 453-650 1-172 (176)
411 KOG1167|consensus 99.9 1.6E-25 3.5E-30 230.2 11.0 256 361-645 32-383 (418)
412 PF00051 Kringle: Kringle doma 99.9 3.6E-26 7.8E-31 189.2 4.3 78 187-265 1-79 (79)
413 KOG0195|consensus 99.9 6.3E-25 1.4E-29 213.0 8.4 253 363-648 188-447 (448)
414 KOG1164|consensus 99.9 3.1E-22 6.7E-27 211.8 23.0 259 366-649 19-299 (322)
415 PRK09188 serine/threonine prot 99.9 7.6E-23 1.7E-27 216.9 16.5 169 362-565 15-195 (365)
416 COG0515 SPS1 Serine/threonine 99.9 2.3E-21 5E-26 200.9 25.5 251 367-643 2-275 (384)
417 KOG1163|consensus 99.9 1.7E-21 3.8E-26 186.6 17.3 259 362-649 12-286 (341)
418 KOG1165|consensus 99.9 3.4E-20 7.3E-25 185.2 20.1 257 365-650 28-302 (449)
419 KOG0590|consensus 99.9 6E-22 1.3E-26 223.3 7.5 256 368-646 321-588 (601)
420 PRK10359 lipopolysaccharide co 99.8 9.8E-21 2.1E-25 187.4 11.7 174 361-584 27-216 (232)
421 cd05147 RIO1_euk RIO kinase fa 99.8 2.8E-20 6.1E-25 181.3 10.5 138 371-537 3-166 (190)
422 KOG1240|consensus 99.8 9.1E-21 2E-25 213.4 7.7 244 366-643 24-291 (1431)
423 KOG1023|consensus 99.8 8.8E-20 1.9E-24 197.1 14.0 208 422-649 1-226 (484)
424 cd05145 RIO1_like RIO kinase f 99.8 2.4E-19 5.1E-24 175.1 14.4 139 370-538 2-167 (190)
425 KOG4158|consensus 99.8 2E-19 4.3E-24 183.3 12.5 259 361-642 153-509 (598)
426 PF14531 Kinase-like: Kinase-l 99.8 1.8E-19 3.9E-24 183.6 11.4 239 366-634 13-288 (288)
427 KOG0603|consensus 99.8 2.4E-20 5.3E-25 201.2 3.5 229 373-637 2-232 (612)
428 PRK12274 serine/threonine prot 99.8 1.5E-18 3.2E-23 168.5 14.7 186 369-592 6-209 (218)
429 PRK14879 serine/threonine prot 99.8 4.2E-17 9E-22 161.6 18.6 135 371-537 2-143 (211)
430 PRK10345 hypothetical protein; 99.7 1.1E-17 2.3E-22 165.1 13.8 135 370-536 7-157 (210)
431 KOG1166|consensus 99.7 1.3E-17 2.7E-22 192.1 16.5 246 360-647 693-953 (974)
432 KOG1033|consensus 99.7 3.2E-18 7E-23 181.6 5.4 176 442-640 330-509 (516)
433 smart00090 RIO RIO-like kinase 99.7 3.2E-17 7E-22 165.3 12.3 142 367-537 30-197 (237)
434 TIGR03724 arch_bud32 Kae1-asso 99.7 8.8E-17 1.9E-21 157.8 14.0 131 372-537 1-138 (199)
435 KOG0606|consensus 99.7 2.3E-17 5.1E-22 186.2 10.9 208 364-635 82-304 (1205)
436 PRK09605 bifunctional UGMP fam 99.7 1.2E-16 2.7E-21 180.4 14.3 135 367-537 335-476 (535)
437 cd05144 RIO2_C RIO kinase fami 99.7 2.1E-16 4.6E-21 155.2 12.1 136 367-538 17-175 (198)
438 PRK01723 3-deoxy-D-manno-octul 99.6 1.7E-14 3.7E-19 145.8 14.4 135 371-537 37-191 (239)
439 cd05119 RIO RIO kinase family, 99.6 5.5E-15 1.2E-19 143.5 9.0 136 370-538 2-164 (187)
440 cd05120 APH_ChoK_like Aminogly 99.6 2.8E-14 6.2E-19 132.0 13.0 132 369-537 2-138 (155)
441 KOG0590|consensus 99.6 3E-16 6.4E-21 177.3 -2.2 261 364-647 19-290 (601)
442 TIGR01982 UbiB 2-polyprenylphe 99.5 2.1E-12 4.5E-17 141.7 19.3 140 371-538 123-307 (437)
443 KOG0601|consensus 99.3 7.9E-13 1.7E-17 143.5 6.4 255 363-643 112-379 (524)
444 KOG1266|consensus 99.3 1.4E-12 3.1E-17 130.9 6.0 206 420-645 119-333 (458)
445 PRK04750 ubiB putative ubiquin 99.3 1.6E-11 3.5E-16 136.5 14.7 146 366-538 121-314 (537)
446 cd05151 ChoK Choline Kinase (C 99.3 1.1E-11 2.4E-16 118.1 10.8 127 370-536 3-135 (170)
447 KOG0601|consensus 99.3 4E-12 8.8E-17 138.0 6.3 252 362-647 262-518 (524)
448 KOG0606|consensus 99.2 8.8E-12 1.9E-16 141.8 3.8 253 360-638 799-1084(1205)
449 KOG1243|consensus 99.2 4.4E-10 9.5E-15 123.4 15.2 164 393-586 35-199 (690)
450 PF01392 Fz: Fz domain; Inter 99.1 1.9E-11 4E-16 109.3 3.3 109 35-162 1-109 (116)
451 cd05146 RIO3_euk RIO kinase fa 99.1 7.6E-10 1.6E-14 107.6 14.2 141 371-537 3-173 (197)
452 KOG3741|consensus 99.1 4.9E-09 1.1E-13 111.8 17.3 228 378-644 289-522 (655)
453 COG3642 Mn2+-dependent serine/ 99.0 1.8E-09 3.8E-14 101.8 11.8 131 372-537 3-140 (204)
454 cd05154 ACAD10_11_like Acyl-Co 99.0 1.4E-09 3E-14 108.1 11.4 139 371-536 4-205 (223)
455 COG4248 Uncharacterized protei 99.0 1.4E-08 3E-13 105.9 18.5 253 369-652 15-305 (637)
456 KOG3087|consensus 99.0 6.9E-09 1.5E-13 97.4 12.4 144 369-537 11-165 (229)
457 PRK15123 lipopolysaccharide co 98.9 2.9E-08 6.4E-13 101.7 16.3 132 380-536 37-193 (268)
458 PF01163 RIO1: RIO1 family; I 98.8 3.5E-08 7.7E-13 95.5 12.2 125 380-537 1-155 (188)
459 KOG2137|consensus 98.8 4.9E-09 1.1E-13 115.8 4.6 150 494-643 105-265 (700)
460 PF06293 Kdo: Lipopolysacchari 98.6 4.5E-07 9.7E-12 89.6 13.8 105 413-537 56-170 (206)
461 PRK09902 hypothetical protein; 98.5 1.5E-06 3.2E-11 85.0 14.2 139 374-537 27-179 (216)
462 COG0661 AarF Predicted unusual 98.5 6.6E-06 1.4E-10 91.4 20.3 140 371-538 131-315 (517)
463 COG0478 RIO-like serine/threon 98.4 1.5E-06 3.3E-11 86.9 11.0 134 368-536 94-250 (304)
464 PF06176 WaaY: Lipopolysacchar 98.4 6.7E-06 1.4E-10 80.7 14.0 139 361-536 27-182 (229)
465 cd07066 CRD_FZ CRD_domain cyst 98.3 1.2E-06 2.6E-11 78.6 7.1 109 34-162 1-109 (119)
466 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.2E-05 2.6E-10 80.6 12.4 72 371-454 7-80 (226)
467 PF12260 PIP49_C: Protein-kina 98.2 6.2E-06 1.4E-10 80.1 8.5 102 416-538 7-112 (188)
468 PF13095 FTA2: Kinetochore Sim 98.2 4.3E-05 9.3E-10 74.2 14.0 138 353-535 25-206 (207)
469 PF01636 APH: Phosphotransfera 98.1 6E-05 1.3E-09 75.0 13.5 78 370-457 2-84 (239)
470 cd05150 APH Aminoglycoside 3'- 98.0 8.1E-05 1.8E-09 75.4 12.9 75 373-458 6-82 (244)
471 KOG1235|consensus 98.0 6E-05 1.3E-09 83.7 12.0 139 371-538 167-355 (538)
472 COG1718 RIO1 Serine/threonine 97.9 0.00022 4.7E-09 71.0 14.1 138 370-538 53-216 (268)
473 cd07448 CRD_FZ4 Cysteine-rich 97.9 3.2E-05 6.8E-10 69.5 7.0 120 32-176 1-123 (126)
474 KOG0576|consensus 97.9 2.4E-06 5.2E-11 93.8 -0.4 182 365-585 242-425 (829)
475 PLN02876 acyl-CoA dehydrogenas 97.8 0.00015 3.3E-09 86.4 14.0 84 369-455 42-131 (822)
476 KOG1035|consensus 97.8 0.00011 2.3E-09 86.3 10.6 200 412-645 226-436 (1351)
477 cd07463 CRD_FZ9 Cysteine-rich 97.8 7.1E-05 1.5E-09 67.2 7.2 118 31-174 1-122 (127)
478 cd07462 CRD_FZ10 Cysteine-rich 97.7 0.00011 2.3E-09 66.0 7.8 117 32-174 2-122 (127)
479 COG2112 Predicted Ser/Thr prot 97.7 0.00015 3.3E-09 68.4 9.0 129 366-536 23-154 (201)
480 PF10707 YrbL-PhoP_reg: PhoP r 97.7 0.00052 1.1E-08 67.1 12.8 128 371-531 7-165 (199)
481 cd07457 CRD_FZ9_like Cysteine- 97.7 0.0001 2.2E-09 65.8 7.1 106 33-162 1-110 (121)
482 cd05155 APH_ChoK_like_1 Unchar 97.6 0.00046 9.9E-09 69.6 11.3 73 371-456 3-82 (235)
483 cd07461 CRD_FZ8 Cysteine-rich 97.5 0.00032 6.8E-09 62.9 6.9 115 32-172 2-120 (125)
484 smart00063 FRI Frizzled. Droso 97.5 0.00022 4.9E-09 63.0 5.7 104 35-162 1-107 (113)
485 PRK10593 hypothetical protein; 97.5 0.0022 4.7E-08 67.2 14.2 79 367-455 16-100 (297)
486 cd07888 CRD_corin_2 One of two 97.4 0.00044 9.6E-09 61.7 6.6 114 35-171 2-118 (122)
487 cd07464 CRD_FZ2 Cysteine-rich 97.3 0.00057 1.2E-08 61.3 7.0 114 32-173 2-119 (127)
488 cd07466 CRD_FZ7 Cysteine-rich 97.3 0.00068 1.5E-08 60.7 7.2 115 32-174 2-120 (125)
489 cd07465 CRD_FZ1 Cysteine-rich 97.3 0.00074 1.6E-08 60.7 6.9 114 32-173 2-119 (127)
490 cd07458 CRD_FZ1_like Cysteine- 97.2 0.0008 1.7E-08 59.8 6.5 105 33-162 1-109 (119)
491 cd07460 CRD_FZ5 Cysteine-rich 97.2 0.0008 1.7E-08 60.4 6.3 115 33-174 3-122 (127)
492 cd07456 CRD_FZ5_like Cysteine- 97.2 0.0014 3E-08 58.5 7.3 105 34-162 1-109 (120)
493 cd07454 CRD_LIN_17 Cysteine-ri 97.1 0.00085 1.8E-08 60.1 5.8 88 32-129 2-90 (124)
494 TIGR02721 ycfN_thiK thiamine k 97.1 0.0017 3.7E-08 66.3 8.7 72 373-456 4-76 (256)
495 cd05157 ETNK_euk Ethanolamine 97.1 0.0046 1E-07 62.0 11.6 77 370-456 3-80 (235)
496 TIGR00938 thrB_alt homoserine 97.0 0.0064 1.4E-07 63.9 12.5 157 366-536 23-216 (307)
497 cd07442 CRD_SFRP4 Cysteine-ric 97.0 0.0017 3.7E-08 58.2 6.4 105 34-162 4-113 (127)
498 PRK09550 mtnK methylthioribose 97.0 0.011 2.3E-07 64.1 13.6 78 370-454 31-117 (401)
499 cd07441 CRD_SFRP3 Cysteine-ric 97.0 0.0017 3.8E-08 58.1 6.1 107 34-162 3-112 (126)
500 PRK05231 homoserine kinase; Pr 96.9 0.012 2.6E-07 62.1 12.7 30 507-536 187-216 (319)
No 1
>KOG1026|consensus
Probab=100.00 E-value=5.3e-90 Score=757.90 Aligned_cols=585 Identities=41% Similarity=0.734 Sum_probs=479.3
Q ss_pred CCCCccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHH-HHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCC
Q psy5539 30 QPQGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMA-LWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGI 108 (653)
Q Consensus 30 ~~~g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~-~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~ 108 (653)
...|+|++|+|..|..+++ + .+.++.+....+ +..++++++ +|.+...+++..|+..+++++|+|+||.|.....+
T Consensus 160 ~e~~~~~~~~~~~c~~~~~-~-~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~c~~~~~~vp~~~~~~~~~~~~~~ 236 (774)
T KOG1026|consen 160 REDGFCVPYRGLACLNFLS-N-GTVANESIQLCG-EIENRIRAANLTVEEGSSITLKCSQAGIPVPCHYWFPNCLASSNT 236 (774)
T ss_pred cccCCCCCchhhHHHhhcC-C-ceehhhhhhhhc-chhhhhhhhhhhhcccchheeeeecccCCCcceeeecccccccCC
Confidence 4556999999999999998 3 455555545444 555566655 77777799999999999999999999999999999
Q ss_pred CCCCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCCCCCCCCCCcccCCCCcCCCCCCCCccccccccccc
Q psy5539 109 PMSLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELPNCDTLPKYEVVNGKPTCSHAQLTEMKTDEITYDCI 188 (653)
Q Consensus 109 ~~~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp~C~~lp~~~~~~~~~~C~~~~~~~~~~~~~~~~C~ 188 (653)
+.+..+|+++|.......|..|+...+.+... ...+.+|.|..++... .+....|.....+ ....+.++.||
T Consensus 237 ~~~~~~c~~~~~~~~~~~c~~E~~~~~~~~~v------~~~~~~p~~~~~~~~~-~~~~~~C~~~~~~-~~~~~~~~~~~ 308 (774)
T KOG1026|consen 237 NQTSSLCRSECEVLENDLCIAENAVARSNPSI------LLVVDLPKAEVLLCSP-LSDHHNCIPIGIT-ANPGPALHWCY 308 (774)
T ss_pred CcccccccccceeeechhhHHHHhhhhcCcee------eeEEecccccccCCCC-ccccCceeeeecc-CCCCCceeeee
Confidence 99999999999988889999999888888643 3667899999988654 3446788777666 44556688999
Q ss_pred cCCccccceeeeccCCCC-cccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCe--EEEeCCCcceeecccCCC
Q psy5539 189 RGRGRFYQGTVNTTVGGL-ACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPW--CYTMDPNVRWQRCEIPTC 265 (653)
Q Consensus 189 ~~~g~~yrg~~~~t~sg~-~C~~W~~~~~~~~~~~~~~~~~~~~~~nyCRNp~~~~~~pW--C~~~~~~~~~~~C~ip~C 265 (653)
++.|..|+|++++|.+|. .|++|+.+ +|.|......+|+...++||||||++-..+|| |+..+....-..|++|.|
T Consensus 309 ~~~~~~~~g~~~~t~s~~~~C~~~~~~-~h~~~~~~~~~~e~~~g~~~~r~~g~~~~~P~~~~~~~~~~~~~~~~~~ps~ 387 (774)
T KOG1026|consen 309 NGSGLNYRGTVCVTKSGKEQCLPWNDP-PHSHNGNYTLFPELPGGKNYCRNPGGFMSRPWMYCFDNDKTFEPSLCDIPSC 387 (774)
T ss_pred cCccceEecccccccccCcCCcccCcC-cccccCcceeeecccCccccccCcCccccCCCccccccccccCcccCCCCCc
Confidence 999999999999999995 99999987 88898899999999999999999999999996 444556677888999999
Q ss_pred CCCCccccccccchhHhhhhhhccCCeeeEehhHHHHHHHHHHHHHHHHHhhhcccCCCCCC---------------CCC
Q psy5539 266 ADSMQDDVKSWGNKIKALLEQFLSQPYFIVLAVIFIPVASMLCLICVVCVIRLVKRNVDYAP---------------APS 330 (653)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~i~~~~~~~~~kr~~~~~~---------------~~~ 330 (653)
.....+. +. +..+.++++..+.++++++.+++++. ..+|++.... .+.
T Consensus 388 ~~~~~~~-~~---------------~~~~~~i~g~~~~~~~~l~~l~~~~~-~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 450 (774)
T KOG1026|consen 388 DIKDKKS-ED---------------PTGISAIVGISVFAILLLLLLFFLVN-CGRRNKFGMKSSSPLHRILNGTSTPSSS 450 (774)
T ss_pred ccccccc-cC---------------CcceEEEecchHhHHHHHHHHHHhhh-hhcccccCCCcchHHHhcccCCCCcCcc
Confidence 8765432 01 22222222222222222222222221 2222211111 000
Q ss_pred CCcccC--CCCCCCCCCccccccccCccccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc
Q psy5539 331 QDVNID--LSKLPCNASYHQTDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS 408 (653)
Q Consensus 331 ~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~ 408 (653)
+....+ ......+.. .......++++...++++.++.+.+.||+|+||+||+|+..++....+...||||.+++.++
T Consensus 451 ~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~ 529 (774)
T KOG1026|consen 451 QTGEMTVLIGSTQHPVI-ENKEPQLNPDLKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE 529 (774)
T ss_pred cccccccccccccCCCc-cccCCCCCCccceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc
Confidence 100000 000000011 11344567788889999999999999999999999999999988888999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHH
Q psy5539 409 EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTC 488 (653)
Q Consensus 409 ~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 488 (653)
.+.+++|+||+++++.|+|||||+|+|+|..+++++||||||.+|||++||+.++|........+. ...+|+..
T Consensus 530 ~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~------~~~~L~~~ 603 (774)
T KOG1026|consen 530 NQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQD------TPPPLSTS 603 (774)
T ss_pred HHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCC------CCCCCCHH
Confidence 889999999999999999999999999999999999999999999999999998886543322111 25679999
Q ss_pred HHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCC
Q psy5539 489 DLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT 568 (653)
Q Consensus 489 ~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t 568 (653)
+.+.||.|||.||+||.++.+|||||+++|+||+++..|||+||||++.+|+.||++..+....|+||||||.|.+++||
T Consensus 604 q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFT 683 (774)
T KOG1026|consen 604 QFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFT 683 (774)
T ss_pred HHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 569 VESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 569 ~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
++||||||||+|||+||+|++||++.+++|+++.|++|+.+++|+++|.++++||..||+.+|.+||+|+||...|..+.
T Consensus 684 teSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 684 TESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred chhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred HH
Q psy5539 649 RD 650 (653)
Q Consensus 649 ~~ 650 (653)
+.
T Consensus 764 ~~ 765 (774)
T KOG1026|consen 764 QA 765 (774)
T ss_pred hc
Confidence 54
No 2
>KOG0197|consensus
Probab=100.00 E-value=7.4e-54 Score=452.01 Aligned_cols=266 Identities=40% Similarity=0.792 Sum_probs=243.0
Q ss_pred ccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeE
Q psy5539 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGV 436 (653)
Q Consensus 357 l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~ 436 (653)
...+++.++.+.+++.||+|-||.||.|++.+. ..||||.++.... ..++|.+|+.+|++|+|+|||+++|+
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~------~~vavk~ik~~~m--~~~~f~~Ea~iMk~L~H~~lV~l~gV 269 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGS------TKVAVKTIKEGSM--SPEAFLREAQIMKKLRHEKLVKLYGV 269 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCC------CcccceEEecccc--ChhHHHHHHHHHHhCcccCeEEEEEE
Confidence 345678888889999999999999999998652 4699999987532 23578999999999999999999999
Q ss_pred EecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 437 CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 437 ~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
|..+++++||||||+.|+|.+||+. .....+...+.+.++.|||+||+||+++++|||||++
T Consensus 270 ~~~~~piyIVtE~m~~GsLl~yLr~------------------~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAA 331 (468)
T KOG0197|consen 270 CTKQEPIYIVTEYMPKGSLLDYLRT------------------REGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAA 331 (468)
T ss_pred EecCCceEEEEEecccCcHHHHhhh------------------cCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhh
Confidence 9999999999999999999999983 2346688999999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+||||+++..+||+|||||+ ...++.+........|+.|.|||.+..++|+.|||||||||+||||+|.|..||.+++.
T Consensus 332 RNiLV~~~~~vKIsDFGLAr-~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn 410 (468)
T KOG0197|consen 332 RNILVDEDLVVKISDFGLAR-LIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN 410 (468)
T ss_pred hheeeccCceEEEccccccc-ccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH
Confidence 99999999999999999999 44566667777788899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 597 ~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
.++++.+..|.+++.|+.||++++++|..||+.+|++||||+.+...+.++..
T Consensus 411 ~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 411 EEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred HHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999888887754
No 3
>KOG1095|consensus
Probab=100.00 E-value=3.3e-51 Score=466.30 Aligned_cols=278 Identities=46% Similarity=0.801 Sum_probs=255.2
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++++..+.+.+.||+|+||.||.|...+.........||||.++...++....+|.+|..+|+.++|||||+++|++...
T Consensus 688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~ 767 (1025)
T KOG1095|consen 688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS 767 (1025)
T ss_pred cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC
Confidence 57788999999999999999999998664333334669999999988888899999999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...++++|||++|||..||+..+++.. ....++..+++.++.|||+|+.||+++++|||||+++|+|
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~-------------~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCL 834 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPF-------------QPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCL 834 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccC-------------CCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhhee
Confidence 999999999999999999997766543 2456899999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
|++...|||+|||+|+.++..+++........|++|||||++..+.||.|||||||||+||||||.|.+||.+.+..+++
T Consensus 835 L~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~ 914 (1025)
T KOG1095|consen 835 LDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL 914 (1025)
T ss_pred ecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH
Confidence 99999999999999999999999887777788999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL 651 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l 651 (653)
..+..+.+++.|..||+.++++|..||+.+|++||+|..|++.+..+.+.+
T Consensus 915 ~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 915 LDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred HHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 977777799999999999999999999999999999999999887776543
No 4
>KOG0196|consensus
Probab=100.00 E-value=5.1e-52 Score=448.33 Aligned_cols=269 Identities=39% Similarity=0.686 Sum_probs=248.3
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
|+..+.+.+.+.||.|.||.||+|+++. ..+....||||.+|....+.++.+|..|+.||.+++||||++|.|+....
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~--pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks 702 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKL--PGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS 702 (996)
T ss_pred hcChhheEEEEEEecccccceecccccC--CCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC
Confidence 6777889999999999999999999864 34455789999999999999999999999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
++.++|.|||++|+|..||+. +.+.+++.++..++++||.||.||.++++|||||.++|||
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~-------------------~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNIL 763 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQ-------------------NDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNIL 763 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhh-------------------cCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhhee
Confidence 999999999999999999983 3356899999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccc-cccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQD-YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
|+.+..+||+||||++.+..+. .........+|++|.|||.|..+++|.+|||||||++|||.+++|..||.+++.+++
T Consensus 764 VNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV 843 (996)
T KOG0196|consen 764 VNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 843 (996)
T ss_pred eccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH
Confidence 9999999999999999764332 223445567799999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 600 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
++.|.+|..++.|.+||..|++||..||++|-.+||+|.+|+.+|..+.++
T Consensus 844 IkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 844 IKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred HHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999998764
No 5
>KOG0192|consensus
Probab=100.00 E-value=4e-48 Score=409.48 Aligned_cols=265 Identities=36% Similarity=0.593 Sum_probs=228.5
Q ss_pred ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceE-EEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeE
Q psy5539 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTL-VAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGV 436 (653)
Q Consensus 359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~-VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~ 436 (653)
..++...++.+.+.||+|+||+||+|.+.| +. ||||++.... .....++|.+|+.+|.+++|||||+|+|+
T Consensus 35 ~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g-------~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~ 107 (362)
T KOG0192|consen 35 EEEIDPDELPIEEVLGSGSFGTVYKGKWRG-------TDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGA 107 (362)
T ss_pred ceecChHHhhhhhhcccCCceeEEEEEeCC-------ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEE
Confidence 345555666777779999999999999865 44 9999998643 22336789999999999999999999999
Q ss_pred EecCC-ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCC-ceecCC
Q psy5539 437 CAVGK-PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRK-FVHRDL 514 (653)
Q Consensus 437 ~~~~~-~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-ivHrDL 514 (653)
+.... .+++|||||++|+|.++|+.. ....+++..+++++.|||+||.|||+++ ||||||
T Consensus 108 ~~~~~~~~~iVtEy~~~GsL~~~l~~~------------------~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDL 169 (362)
T KOG0192|consen 108 CTSPPGSLCIVTEYMPGGSLSVLLHKK------------------RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDL 169 (362)
T ss_pred EcCCCCceEEEEEeCCCCcHHHHHhhc------------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeeccc
Confidence 99887 799999999999999999732 2457999999999999999999999999 999999
Q ss_pred CCCCEeEcCCC-cEEEeccCccccccccccccCCCCCCCccccccchhhc--cCCCCCchhHHHHHHHHHHHHhCCCCCC
Q psy5539 515 ATRNCLINDQM-VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL--YNKYTVESDVWAFGVCLWEIFSFALQPY 591 (653)
Q Consensus 515 kp~NILl~~~~-~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~t~ksDVwSlGvvl~ellt~~~~p~ 591 (653)
||+||||+.++ ++||+|||+++...... .......||.+|||||.+. ...|+.|+||||||++||||+|+. .||
T Consensus 170 K~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~-~Pf 246 (362)
T KOG0192|consen 170 KSDNILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGE-IPF 246 (362)
T ss_pred ChhhEEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCC-CCC
Confidence 99999999997 99999999998754322 2334478899999999999 569999999999999999999965 599
Q ss_pred CCCCHHHHHHHHH-cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q psy5539 592 YGLTHEEVVKYIK-EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL 651 (653)
Q Consensus 592 ~~~~~~e~~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l 651 (653)
.+....++...+. .+..+..|..+++.+..+|.+||+.||.+||++.+|+..|..+....
T Consensus 247 ~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 247 EDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred CCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 9988877776664 66667778889999999999999999999999999999999887653
No 6
>KOG0581|consensus
Probab=100.00 E-value=1.2e-48 Score=395.34 Aligned_cols=258 Identities=28% Similarity=0.403 Sum_probs=232.3
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+..++++.++.||+|..|+|||++++ .+++.+|+|++..+..+..++++.+|++++++.+||+||+++|.|....
T Consensus 76 i~~~dle~~~~lG~G~gG~V~kv~Hk-----~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~ 150 (364)
T KOG0581|consen 76 ISLSDLERLGVLGSGNGGTVYKVRHK-----PTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG 150 (364)
T ss_pred cCHHHhhhhhhcccCCCcEEEEEEEc-----CCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC
Confidence 44557788899999999999999975 4679999999988888888999999999999999999999999999988
Q ss_pred -ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCCE
Q psy5539 442 -PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVHRDLATRNC 519 (653)
Q Consensus 442 -~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivHrDLkp~NI 519 (653)
...++||||++|+|.++++ ..+.+++..+-+|+.+|++||.|||+ ++||||||||+||
T Consensus 151 ~~isI~mEYMDgGSLd~~~k--------------------~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNl 210 (364)
T KOG0581|consen 151 EEISICMEYMDGGSLDDILK--------------------RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNL 210 (364)
T ss_pred ceEEeehhhcCCCCHHHHHh--------------------hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHe
Confidence 5999999999999999986 23568999999999999999999995 9999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCC-----C
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG-----L 594 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~-----~ 594 (653)
||+..|+|||+|||.++.+... ......||..|||||.+.+..|+.++||||||++++|+++|.. ||.. .
T Consensus 211 LvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~Grf-P~~~~~~~~~ 285 (364)
T KOG0581|consen 211 LVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRF-PYPPPNPPYL 285 (364)
T ss_pred eeccCCCEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCC-CCCCcCCCCC
Confidence 9999999999999999876433 2345688999999999999999999999999999999999665 6654 3
Q ss_pred CHHHHHHHHHcCCccCCCCC-CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 595 THEEVVKYIKEGNILQAPDN-TPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 595 ~~~e~~~~i~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
+..+++.+|.++..+..|+. +++++++|+..|+++||.+||+++++++|.|-.+.
T Consensus 286 ~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 286 DIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred CHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence 67889999999988888887 99999999999999999999999999999986643
No 7
>KOG1094|consensus
Probab=100.00 E-value=8.4e-48 Score=403.96 Aligned_cols=264 Identities=46% Similarity=0.841 Sum_probs=238.5
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV 439 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~ 439 (653)
.|++++.+.+.++||+|-||.|.++...+ ...||||+++.++....+.+|.+||++|.+++|||||+|+|+|..
T Consensus 533 ~EfPRs~L~~~ekiGeGqFGEVhLCeveg------~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~ 606 (807)
T KOG1094|consen 533 VEFPRSRLRFKEKIGEGQFGEVHLCEVEG------PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ 606 (807)
T ss_pred hhcchhheehhhhhcCcccceeEEEEecC------ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec
Confidence 47899999999999999999999998643 578999999999999889999999999999999999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
+++++||+|||++|||.+||..+.+ +.+......+|+.|||+||+||.+-++|||||.++|+
T Consensus 607 DePicmI~EYmEnGDLnqFl~ahea------------------pt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNc 668 (807)
T KOG1094|consen 607 DDPLCMITEYMENGDLNQFLSAHEL------------------PTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNC 668 (807)
T ss_pred CCchHHHHHHHhcCcHHHHHHhccC------------------cccccchhHHHHHHHHHHHHHHHhhchhhccccccce
Confidence 9999999999999999999974422 2234455678999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhC-CCCCCCCCCHHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF-ALQPYYGLTHEE 598 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~-~~~p~~~~~~~e 598 (653)
|+|.++++||+|||+++.+++.++++.......|++|||+|.+..+++|.+||||+||+++||+++. ..+||...+.++
T Consensus 669 Lv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~ 748 (807)
T KOG1094|consen 669 LVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ 748 (807)
T ss_pred eecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999874 357999999888
Q ss_pred HHHHHHc-------CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 599 VVKYIKE-------GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 599 ~~~~i~~-------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+++.... ...+..|..++..++++|..||..+..+||+|++|+..|.+.
T Consensus 749 vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 749 VVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 8876533 123556778999999999999999999999999999998764
No 8
>KOG4278|consensus
Probab=100.00 E-value=4.5e-47 Score=399.28 Aligned_cols=270 Identities=39% Similarity=0.777 Sum_probs=246.5
Q ss_pred CccccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceE
Q psy5539 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKL 433 (653)
Q Consensus 354 ~~~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l 433 (653)
.+...++|..+.++....+||-|.||.||.|.++. ..-.||||.++++..+ .++|..|+.+|+.++|||+|+|
T Consensus 256 SPn~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKk-----yslTvAVKtLKEDtMe--veEFLkEAAvMKeikHpNLVqL 328 (1157)
T KOG4278|consen 256 SPNADKWEMERTDITMKHKLGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQL 328 (1157)
T ss_pred cCCcchhhccchheeeeeccCCCcccceeeeeeec-----cceeeehhhhhhcchh--HHHHHHHHHHHHhhcCccHHHH
Confidence 35567889999999999999999999999999853 3467999999988765 5689999999999999999999
Q ss_pred EeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecC
Q psy5539 434 LGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRD 513 (653)
Q Consensus 434 ~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrD 513 (653)
+|+|..+.++|||.|||.+|+|.+||+.+. ...++...++.++.||++||+||..+++||||
T Consensus 329 LGVCT~EpPFYIiTEfM~yGNLLdYLRecn------------------r~ev~avvLlyMAtQIsSaMeYLEkknFIHRD 390 (1157)
T KOG4278|consen 329 LGVCTHEPPFYIITEFMCYGNLLDYLRECN------------------RSEVPAVVLLYMATQISSAMEYLEKKNFIHRD 390 (1157)
T ss_pred hhhhccCCCeEEEEecccCccHHHHHHHhc------------------hhhcchhHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999999999999998543 34567778899999999999999999999999
Q ss_pred CCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q psy5539 514 LATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593 (653)
Q Consensus 514 Lkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~ 593 (653)
|.++|+|++++..|||+||||++.+..+. +........++.|.|||.+.++.++.|||||+|||+||||.|+|..||.+
T Consensus 391 LAARNCLVgEnhiVKvADFGLsRlMtgDT-YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG 469 (1157)
T KOG4278|consen 391 LAARNCLVGENHIVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 469 (1157)
T ss_pred hhhhhccccccceEEeeccchhhhhcCCc-eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999986544 44445556789999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 594 LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 594 ~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
.+..++...+..+..++.|+.||+.+++||+.||+.+|.+||+|.||++.++.|..
T Consensus 470 idlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 470 IDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred ccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999987753
No 9
>KOG0194|consensus
Probab=100.00 E-value=2.2e-46 Score=401.44 Aligned_cols=272 Identities=35% Similarity=0.652 Sum_probs=239.0
Q ss_pred cccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccc--cccHHHHHHHHHHHHHHhhCCCCccceEEe
Q psy5539 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD--EASEYLQTDFEREACLLAEFDHPNIVKLLG 435 (653)
Q Consensus 358 ~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~--~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g 435 (653)
..+++..+++.+.+.||+|+||.||+|++.-.... ....||||..+. ........+|.+|+++|+.++|||||+++|
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~-~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGF-KVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCc-eeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 44677888888899999999999999998531111 112299999985 356677889999999999999999999999
Q ss_pred EEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539 436 VCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515 (653)
Q Consensus 436 ~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk 515 (653)
++....++++|||+++||+|.+||+.. ...++..+.+.++.+.|.||+|||+++++||||.
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~-------------------~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIA 289 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKN-------------------KKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIA 289 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhC-------------------CCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHh
Confidence 999999999999999999999999832 2358999999999999999999999999999999
Q ss_pred CCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
++|+|++.++.+||+||||++... .+.........|++|+|||.+..+.|+.++|||||||++||+++.|..||.+..
T Consensus 290 ARNcL~~~~~~vKISDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~ 367 (474)
T KOG0194|consen 290 ARNCLYSKKGVVKISDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK 367 (474)
T ss_pred HHHheecCCCeEEeCccccccCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC
Confidence 999999999999999999997643 222223345789999999999999999999999999999999998888999999
Q ss_pred HHHHHHHH-HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q psy5539 596 HEEVVKYI-KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL 651 (653)
Q Consensus 596 ~~e~~~~i-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l 651 (653)
..++...| .++...+.+...|.++..++.+||..+|++||+|.++.+.+..+....
T Consensus 368 ~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 368 NYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred HHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 99999999 778888888999999999999999999999999999999999887654
No 10
>KOG4257|consensus
Probab=100.00 E-value=1e-45 Score=390.04 Aligned_cols=273 Identities=38% Similarity=0.729 Sum_probs=248.3
Q ss_pred ccccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEE
Q psy5539 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLL 434 (653)
Q Consensus 355 ~~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~ 434 (653)
|.....++.++.+...+.||+|.||.||+|...... ....-.||||.-|.+...+..+.|..|..+|+.++|||||+|+
T Consensus 379 P~~rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~-kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLI 457 (974)
T KOG4257|consen 379 PTVRNYELRRELITLKRLIGEGQFGDVYKGVYTDPE-KGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLI 457 (974)
T ss_pred CCCCcceeehhhccHHHhhcCCcccceeeeEecccc-cCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhhee
Confidence 344456777888888889999999999999986532 3455679999999877777788999999999999999999999
Q ss_pred eEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539 435 GVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514 (653)
Q Consensus 435 g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL 514 (653)
|+|.+ .+.++|||.++-|.|.+||+.+ ...|+...+..++.||..+|+|||+.++|||||
T Consensus 458 Gv~~e-~P~WivmEL~~~GELr~yLq~n-------------------k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDI 517 (974)
T KOG4257|consen 458 GVCVE-QPMWIVMELAPLGELREYLQQN-------------------KDSLPLRTLTLYCYQICTALAYLESKRFVHRDI 517 (974)
T ss_pred eeeec-cceeEEEecccchhHHHHHHhc-------------------cccchHHHHHHHHHHHHHHHHHHHhhchhhhhh
Confidence 99875 5789999999999999999833 356888899999999999999999999999999
Q ss_pred CCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594 (653)
Q Consensus 515 kp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~ 594 (653)
..+|||+...-.|||+||||++.+..+.+++.. ....|+.|||||++..+++|.+||||-|||.+|||++.|..||.+.
T Consensus 518 AaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgv 596 (974)
T KOG4257|consen 518 AARNILVSSPQCVKLADFGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGV 596 (974)
T ss_pred hhhheeecCcceeeecccchhhhccccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccc
Confidence 999999999999999999999998877777665 6678999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 595 THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 595 ~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
...+++-.|..|.+++.|++||+.++.||.+||..+|.+||.+.+|...|.++.+
T Consensus 597 kNsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 597 KNSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred cccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988765
No 11
>KOG0575|consensus
Probab=100.00 E-value=6.6e-45 Score=387.68 Aligned_cols=253 Identities=24% Similarity=0.389 Sum_probs=227.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
.+|...+.||+|||++||.++.. .++..||+|++... .+...++.+.+||++-++|+|||||+++++|++.+.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~-----~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDL-----DTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEc-----CCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCc
Confidence 46888999999999999999853 46789999999753 234566788999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.|||+|++.+|+|.++++ ...++++.++..+.+||+.||.|||+++|+|||||..|++|+
T Consensus 93 VYivLELC~~~sL~el~K--------------------rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~ 152 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLK--------------------RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLN 152 (592)
T ss_pred eEEEEEecCCccHHHHHH--------------------hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeec
Confidence 999999999999999997 346799999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
++++|||+|||||..+...+ .......||+.|.|||++....++..+||||+||+||-|+. |.|||...+..+....
T Consensus 153 ~~~~VKIgDFGLAt~le~~~--Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~-G~PPFetk~vkety~~ 229 (592)
T KOG0575|consen 153 ENMNVKIGDFGLATQLEYDG--ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLV-GRPPFETKTVKETYNK 229 (592)
T ss_pred CcCcEEecccceeeeecCcc--cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhh-CCCCcccchHHHHHHH
Confidence 99999999999998764322 23344678999999999999999999999999999999998 6789999999999999
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
|+..+. ..|..++.+..+||.++|+++|.+|||+++|+.+.+-
T Consensus 230 Ik~~~Y-~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 230 IKLNEY-SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred HHhcCc-ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 998875 4677999999999999999999999999999998765
No 12
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.8e-44 Score=383.96 Aligned_cols=291 Identities=38% Similarity=0.690 Sum_probs=232.5
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEe
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCA 438 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~ 438 (653)
++++.++|++.+.||+|+||.||+|...+.....++..||||+++..........+.+|+.++..+ +||||+++++++.
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 467888999999999999999999987544444566789999998655555566789999999999 8999999999887
Q ss_pred cC-CceEEEEeecCCCChHHHHhhcCCCCCcC--------------------------CC----cccc------------
Q psy5539 439 VG-KPMCLLFEYMGRGDLNDFLRICSPNNYIN--------------------------GT----YSSM------------ 475 (653)
Q Consensus 439 ~~-~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~--------------------------~~----~~~~------------ 475 (653)
.. ...++||||+++|+|.++++......... .. ....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 54 46899999999999999998543210000 00 0000
Q ss_pred cccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccc
Q psy5539 476 ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVR 555 (653)
Q Consensus 476 ~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~ 555 (653)
.........+++.+++.++.||+.||+|||+++|+||||||+|||+++++.+||+|||+++...............++..
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 00001134588999999999999999999999999999999999999999999999999986543322222233455678
Q ss_pred cccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCC
Q psy5539 556 WMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH-EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNR 634 (653)
Q Consensus 556 y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~-~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 634 (653)
|||||.+.+..++.++||||||+++|||++.+..||.+... +++...+..+.....+..+++++.+|+.+||+.+|.+|
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 321 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKER 321 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 99999999999999999999999999999867779877553 45566667776666778889999999999999999999
Q ss_pred CCHHHHHHHHHHHHHH
Q psy5539 635 PSFRTIYQTLWNIKRD 650 (653)
Q Consensus 635 Ps~~eil~~L~~l~~~ 650 (653)
||+.+|++.|.++.++
T Consensus 322 Ps~~el~~~l~~~~~~ 337 (338)
T cd05102 322 PTFSALVEILGDLLQE 337 (338)
T ss_pred cCHHHHHHHHHHHHhc
Confidence 9999999999988754
No 13
>KOG0595|consensus
Probab=100.00 E-value=6.9e-45 Score=370.83 Aligned_cols=252 Identities=29% Similarity=0.486 Sum_probs=218.0
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
..+|.+.+.||+|+||+||+|+++ .++..||||.+.... ....++.+..|+++|+.++|||||.|++++..++.
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~-----~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHK-----KSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEec-----cCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCe
Confidence 357888899999999999999974 355899999987653 56677889999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.+|||||+.+|||.+||+. .+.+++..+..++.|||.||++||+++||||||||+||||+
T Consensus 84 i~lVMEyC~gGDLs~yi~~--------------------~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs 143 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIRR--------------------RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLS 143 (429)
T ss_pred EEEEEEeCCCCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEec
Confidence 9999999999999999983 34689999999999999999999999999999999999997
Q ss_pred CC------CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 523 DQ------MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 523 ~~------~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
.+ -.+||+|||+|+.+..... .....|++.|||||++...+|+.|+|+||+|++|||+++ |.+||...+.
T Consensus 144 ~~~~~~~~~~LKIADFGfAR~L~~~~~---a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~-g~~Pf~a~t~ 219 (429)
T KOG0595|consen 144 TTARNDTSPVLKIADFGFARFLQPGSM---AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLT-GKPPFDAETP 219 (429)
T ss_pred cCCCCCCCceEEecccchhhhCCchhH---HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHh-CCCCccccCH
Confidence 65 5689999999998753322 234578999999999999999999999999999999999 5579999999
Q ss_pred HHHHHHHHcCCcc--CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 597 EEVVKYIKEGNIL--QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 597 ~e~~~~i~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
.|++..++.+... ..+...+..+.+++...+..+|.+|-++.+-..+.
T Consensus 220 ~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 220 KELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHP 269 (429)
T ss_pred HHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhh
Confidence 9999999887642 23344666777899999999999998887765543
No 14
>KOG0598|consensus
Probab=100.00 E-value=1.1e-44 Score=366.49 Aligned_cols=257 Identities=24% Similarity=0.397 Sum_probs=226.7
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEe
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCA 438 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~ 438 (653)
....++|++++.||+|+||+||+++.. .+++.+|+|++++..- ....+....|..+|.+++||.||+++-.|+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~-----dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ 95 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKK-----DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQ 95 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEc-----ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecc
Confidence 345678999999999999999999853 6789999999976522 223556789999999999999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
+++.+|||+||+.||+|..+|+ ..+.+++..+..++.+|+.||.|||+++||||||||+|
T Consensus 96 t~~kLylVld~~~GGeLf~hL~--------------------~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPEN 155 (357)
T KOG0598|consen 96 TEEKLYLVLDYLNGGELFYHLQ--------------------REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPEN 155 (357)
T ss_pred cCCeEEEEEeccCCccHHHHHH--------------------hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHH
Confidence 9999999999999999999996 34568899999999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
||||++|.++|+||||++.....+ .......||+.|||||.+....|+..+|.||||+++|||++ |.+||.+.+..+
T Consensus 156 ILLd~~GHi~LtDFgL~k~~~~~~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~-G~pPF~~~~~~~ 232 (357)
T KOG0598|consen 156 ILLDEQGHIKLTDFGLCKEDLKDG--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLT-GKPPFYAEDVKK 232 (357)
T ss_pred eeecCCCcEEEeccccchhcccCC--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhh-CCCCCcCccHHH
Confidence 999999999999999998542221 23344789999999999999999999999999999999999 667999999999
Q ss_pred HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC----CHHHHHHHHH
Q psy5539 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP----SFRTIYQTLW 645 (653)
Q Consensus 599 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP----s~~eil~~L~ 645 (653)
+.+.|..+.....+..++.+.++++++++..+|++|. ++.+|.+|.+
T Consensus 233 ~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~Hpf 283 (357)
T KOG0598|consen 233 MYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPF 283 (357)
T ss_pred HHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcc
Confidence 9999999987777777999999999999999999996 6777777653
No 15
>KOG1187|consensus
Probab=100.00 E-value=1.3e-44 Score=384.98 Aligned_cols=267 Identities=28% Similarity=0.424 Sum_probs=211.2
Q ss_pred ccccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEE
Q psy5539 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLL 434 (653)
Q Consensus 355 ~~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~ 434 (653)
..+.+++-++++|.-.+.||+|+||.||+|.+.+ +..||||++....... ..+|.+|++++.+++|||+|+|+
T Consensus 65 fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~------~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 65 FSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD------GTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred eeHHHHHHHHhCCchhcceecCCCeEEEEEEECC------CCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEE
Confidence 4566778889999999999999999999999743 3789999988765433 45699999999999999999999
Q ss_pred eEEecCC-ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC---Cce
Q psy5539 435 GVCAVGK-PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR---KFV 510 (653)
Q Consensus 435 g~~~~~~-~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~iv 510 (653)
|+|.+.+ +.+||||||++|+|.++|+... .. .++|..+++||.++|+||+|||+. .||
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~-----------------~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~ii 199 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKK-----------------GE-PLDWETRLKIALGAARGLAYLHEGCPPPII 199 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCC-----------------CC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEe
Confidence 9999988 5999999999999999997211 11 789999999999999999999975 599
Q ss_pred ecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCC-CCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCC
Q psy5539 511 HRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEND-AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589 (653)
Q Consensus 511 HrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~-~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~ 589 (653)
||||||+|||||+++++||+|||+|+...... ...... .+|.+|+|||++..+..|.|+|||||||+|+||+||...
T Consensus 200 HrDiKssNILLD~~~~aKlsDFGLa~~~~~~~--~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~ 277 (361)
T KOG1187|consen 200 HRDIKSSNILLDEDFNAKLSDFGLAKLGPEGD--TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKA 277 (361)
T ss_pred cCCCCHHHeeECCCCCEEccCccCcccCCccc--cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcc
Confidence 99999999999999999999999996543211 111111 789999999999999999999999999999999997743
Q ss_pred CCCCC--C----HHHHHHHHHcCCccCCC------CCCc-----HHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 590 PYYGL--T----HEEVVKYIKEGNILQAP------DNTP-----DALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 590 p~~~~--~----~~e~~~~i~~~~~~~~~------~~~~-----~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
..... . .+.....+.++...... ...+ ..+..+..+|++.+|.+||+|.+|++.|..+.
T Consensus 278 ~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 278 VDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred cCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 22111 1 11222334443332221 1222 23556777899999999999999999886543
No 16
>KOG0591|consensus
Probab=100.00 E-value=6.6e-46 Score=360.43 Aligned_cols=256 Identities=23% Similarity=0.420 Sum_probs=220.8
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEe-EEecC
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLG-VCAVG 440 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g-~~~~~ 440 (653)
+..+|++.+.||+|.||+||+++.. .++..||.|.++-+ ......++...|+.+|+.|+|||||++++ .+...
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~-----~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~ 91 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCL-----LDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIED 91 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeec-----cCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhcc
Confidence 3457889999999999999999853 46789999988743 44566778999999999999999999998 34444
Q ss_pred Cc-eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh--CC--ceecCCC
Q psy5539 441 KP-MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD--RK--FVHRDLA 515 (653)
Q Consensus 441 ~~-~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~--~~--ivHrDLk 515 (653)
.. ++|||||+++|||...++... .....+++..+++++.|++.||.++|+ .. |+|||||
T Consensus 92 ~evlnivmE~c~~GDLsqmIk~~K----------------~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIK 155 (375)
T KOG0591|consen 92 NEVLNIVMELCDAGDLSQMIKHFK----------------KQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIK 155 (375)
T ss_pred chhhHHHHHhhcccCHHHHHHHHH----------------hccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCc
Confidence 44 899999999999999998443 234568999999999999999999998 44 8899999
Q ss_pred CCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
|.||+|+.+|.|||+||||++.+.+... -.....||+.||+||.+.+..|+.+|||||+||++|||.. -.+||++.+
T Consensus 156 PaNIFl~~~gvvKLGDfGL~r~l~s~~t--fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMca-L~~PF~g~n 232 (375)
T KOG0591|consen 156 PANIFLTANGVVKLGDFGLGRFLSSKTT--FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCA-LQSPFYGDN 232 (375)
T ss_pred chheEEcCCCceeeccchhHhHhcchhH--HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHh-cCCCccccc
Confidence 9999999999999999999998744332 2345689999999999999999999999999999999997 456999999
Q ss_pred HHHHHHHHHcCCccCCC-CCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy5539 596 HEEVVKYIKEGNILQAP-DNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642 (653)
Q Consensus 596 ~~e~~~~i~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 642 (653)
..++...|..++..+.| +..+.++..|+..|+..||+.||+.-.++.
T Consensus 233 ~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 233 LLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred HHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 99999999999988888 678999999999999999999998544433
No 17
>KOG0615|consensus
Probab=100.00 E-value=5.5e-45 Score=370.80 Aligned_cols=256 Identities=24% Similarity=0.352 Sum_probs=215.7
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHH------HHHHHHHHHHHHhhCCCCccceEEeE
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY------LQTDFEREACLLAEFDHPNIVKLLGV 436 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~------~~~~f~~Ei~il~~l~HpnIv~l~g~ 436 (653)
-.+.|.+.+.||+|+||.|-+|.. ..+++.||||.++...... -....++|+++|++|+|||||++.++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e-----~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~ 244 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYE-----KKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF 244 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEE-----cccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee
Confidence 345678889999999999999984 4688999999997542211 22346799999999999999999999
Q ss_pred EecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 437 CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 437 ~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
+...+..||||||++||+|.+++..+ +.+.+..-..+++|++.|+.|||++||+||||||
T Consensus 245 f~~~ds~YmVlE~v~GGeLfd~vv~n--------------------k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKP 304 (475)
T KOG0615|consen 245 FEVPDSSYMVLEYVEGGELFDKVVAN--------------------KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKP 304 (475)
T ss_pred eecCCceEEEEEEecCccHHHHHHhc--------------------cccccchhHHHHHHHHHHHHHHHHcCcccccCCc
Confidence 99999999999999999999999632 3456666688999999999999999999999999
Q ss_pred CCEeEcCC---CcEEEeccCccccccccccccCCCCCCCccccccchhhccCC---CCCchhHHHHHHHHHHHHhCCCCC
Q psy5539 517 RNCLINDQ---MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK---YTVESDVWAFGVCLWEIFSFALQP 590 (653)
Q Consensus 517 ~NILl~~~---~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---~t~ksDVwSlGvvl~ellt~~~~p 590 (653)
+|||+..+ ..+||+|||+|+...... -.....||+.|.|||++.+.. +..+.|+||+||+||-+++ |.+|
T Consensus 305 eNILl~~~~e~~llKItDFGlAK~~g~~s---fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLs-G~pP 380 (475)
T KOG0615|consen 305 ENILLSNDAEDCLLKITDFGLAKVSGEGS---FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLS-GYPP 380 (475)
T ss_pred ceEEeccCCcceEEEecccchhhccccce---ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEec-cCCC
Confidence 99999766 789999999998764222 234467899999999998764 3458899999999999999 6679
Q ss_pred CCCCCHHH-HHHHHHcCCccCCCC---CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 591 YYGLTHEE-VVKYIKEGNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 591 ~~~~~~~e-~~~~i~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
|.+...+. +.+.|..|.....|. .++++..+||.+||..||++|||+.|+++|+|--
T Consensus 381 FS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~ 441 (475)
T KOG0615|consen 381 FSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK 441 (475)
T ss_pred cccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence 98776655 889999998766553 5789999999999999999999999999999853
No 18
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.8e-43 Score=362.82 Aligned_cols=280 Identities=46% Similarity=0.903 Sum_probs=237.9
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
..++|++.+.||+|+||.||+|...+.........||+|.++.........+|.+|+.++++++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 44578899999999999999999765444455678999999876666667789999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.+++|||+++|+|.+++....+...... ..........+++..++.++.|++.||.|||+.+++|+||||+|||++
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGA----ESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG 158 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCccccc----ccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc
Confidence 9999999999999999986543221100 000011225689999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||+++.....+.........++..|+|||.+....++.++||||||+++|||++.+.+||.+.+..++...
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 99999999999998765444333334455678899999999999999999999999999999977889999999999999
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+..+.....+..++.++.+|+.+||+.+|.+||++++|+++|..
T Consensus 239 i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 IRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 98888777888899999999999999999999999999999864
No 19
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.9e-43 Score=360.69 Aligned_cols=258 Identities=36% Similarity=0.686 Sum_probs=222.3
Q ss_pred eEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEE
Q psy5539 368 IYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 368 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
.+.+.||.|+||.||+|.+.. ........|+||.++........++|.+|++.+++++||||++++|++...+..++|+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~-~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQ-KDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEES-TTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEc-ccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccc
Confidence 467889999999999999863 3455678999999987666666788999999999999999999999999888899999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.++|+.. ....+++..++.|+.||+.||.|||+++++|+||+++|||+++++.+
T Consensus 81 e~~~~g~L~~~L~~~------------------~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~ 142 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSK------------------NKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQV 142 (259)
T ss_dssp E--TTEBHHHHHHHT------------------CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEE
T ss_pred ccccccccccccccc------------------ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999843 23568999999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||++.................+..|+|||.+....++.++||||||+++|||++++..||.+.+..++...+.++.
T Consensus 143 Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~ 222 (259)
T PF07714_consen 143 KLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ 222 (259)
T ss_dssp EEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999876433333344455677899999999999999999999999999999998778999999999999999988
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
....+..++..+++++..||+.+|.+||++++|++.|
T Consensus 223 ~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 223 RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 8888888999999999999999999999999999876
No 20
>KOG1024|consensus
Probab=100.00 E-value=3e-43 Score=354.79 Aligned_cols=292 Identities=33% Similarity=0.585 Sum_probs=261.5
Q ss_pred cccccCccccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCC
Q psy5539 349 TDARLNPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP 428 (653)
Q Consensus 349 ~~~~~~~~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~Hp 428 (653)
.+...+.+...+.+.+.+++....+-+|.||.||.|.+..-..-.+.+.|-||.++..+++.+...+..|..++..+.||
T Consensus 268 ~p~e~~~r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~ 347 (563)
T KOG1024|consen 268 EPEEFNRRLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHP 347 (563)
T ss_pred ChHHHhhhHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCC
Confidence 34445566677788888899889999999999999987643344455779999999999998888999999999999999
Q ss_pred ccceEEeEEec-CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC
Q psy5539 429 NIVKLLGVCAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR 507 (653)
Q Consensus 429 nIv~l~g~~~~-~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~ 507 (653)
|+..+.+++.. .+..+.++.++.-|+|..||..++..+ ......++..+...++.|++.||+|||++
T Consensus 348 nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~------------~~~aqtvtt~qlV~masQla~am~hlh~~ 415 (563)
T KOG1024|consen 348 NLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDD------------PSYAQTVTTIQLVLMASQLAMAMEHLHNH 415 (563)
T ss_pred CccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCC------------CccccchhHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999864 556788899999999999999765221 12346688889999999999999999999
Q ss_pred CceecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCC
Q psy5539 508 KFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587 (653)
Q Consensus 508 ~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~ 587 (653)
++||.||.++|++||+..+|||+|=.+++.+...|+.....+...|+.||+||.+....|+.+||||||||+||||+|-|
T Consensus 416 ~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg 495 (563)
T KOG1024|consen 416 GVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLG 495 (563)
T ss_pred CcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999887777778899999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhh
Q psy5539 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE 652 (653)
Q Consensus 588 ~~p~~~~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l~ 652 (653)
..||...++.|+..++++|.++..|-+||++++.+|.-||...|++||+++++...|.+...++-
T Consensus 496 ~~PyaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt 560 (563)
T KOG1024|consen 496 KLPYAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLT 560 (563)
T ss_pred CCCccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999887763
No 21
>KOG0193|consensus
Probab=100.00 E-value=4.9e-44 Score=379.00 Aligned_cols=266 Identities=28% Similarity=0.517 Sum_probs=230.4
Q ss_pred ccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEe
Q psy5539 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLG 435 (653)
Q Consensus 357 l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g 435 (653)
++.++++.+++.+...||+|+||+||+|++.| .||||+++.. -.....+.|+.|+..+++-+|.||+-+.|
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--------dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG 455 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--------DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMG 455 (678)
T ss_pred ccccccCHHHhhccceeccccccceeeccccc--------ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeeh
Confidence 47789999999999999999999999999976 5999999854 33456778999999999999999999999
Q ss_pred EEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539 436 VCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515 (653)
Q Consensus 436 ~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk 515 (653)
++..... .+|.-+++|-+|+.+|+. ....++....+.||.|||+||.|||.++|||||||
T Consensus 456 ~~~~p~~-AIiTqwCeGsSLY~hlHv-------------------~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLK 515 (678)
T KOG0193|consen 456 ACMNPPL-AIITQWCEGSSLYTHLHV-------------------QETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLK 515 (678)
T ss_pred hhcCCce-eeeehhccCchhhhhccc-------------------hhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhcc
Confidence 9988776 999999999999999982 22568888999999999999999999999999999
Q ss_pred CCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc---CCCCCchhHHHHHHHHHHHHhCCCCCCC
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYY 592 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~t~ksDVwSlGvvl~ellt~~~~p~~ 592 (653)
+.||++.+++.|||+||||+................+.+.|||||++.. +.|+..|||||||+|+|||++|.+ ||.
T Consensus 516 SnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~l-Pys 594 (678)
T KOG0193|consen 516 SNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGEL-PYS 594 (678)
T ss_pred ccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcC-CcC
Confidence 9999999999999999999876544433334455667889999999974 479999999999999999999766 888
Q ss_pred CCCHHHHHHHHHcCCccC----CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q psy5539 593 GLTHEEVVKYIKEGNILQ----APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL 651 (653)
Q Consensus 593 ~~~~~e~~~~i~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l 651 (653)
....+.++-++-.|...+ ...+++.++++|+..||..++++||.|.+|+..|.++...+
T Consensus 595 i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 595 IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 888888888887775433 34578889999999999999999999999999888877643
No 22
>cd07469 CRD_TK_ROR_related Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors. The cysteine-rich domain (CRD) is an essential part of the tyrosine kinase-like orphan receptor (Ror) proteins, a conserved family of tyrosine kinases that function in various processes, including neuronal and skeletal development, cell polarity, and cell movement. Ror proteins are receptors of Wnt proteins, which are key players in a number of fundamental cellular processes in embryogenesis and postnatal development. In different cellular contexts, Ror proteins can either activate or repress transcription of Wnt target genes, and can modulate Wnt signaling by sequestering Wnt ligands.
Probab=100.00 E-value=9.4e-45 Score=324.02 Aligned_cols=146 Identities=53% Similarity=1.079 Sum_probs=138.7
Q ss_pred CCCccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCC
Q psy5539 31 PQGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPM 110 (653)
Q Consensus 31 ~~g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~ 110 (653)
++|||++|||+||++||+++++||||++++++ +++||+|++++|.|++++||+.||+||+++||||+||+|++.+.+|+
T Consensus 1 ~~GyC~~Y~G~iC~~yL~~~~~V~~~~s~~~~-~~~~E~l~~~~~~e~~~~ls~~Cr~~A~~~LC~~aFP~C~~~~~~p~ 79 (147)
T cd07469 1 SAGYCATYRGEVCRAYLSNDALVWFNSSYADP-EGLNEQLTTGLWEELIKTVSELCRPAAEKLLCNYAFPECHPSGVGPT 79 (147)
T ss_pred CCCccccccchHHHHHhCCCcEEEEecCCCCH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 47999999999999999987899999997654 58999999999999999999999999999999999999999999999
Q ss_pred CCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCCCCCCCCCCcccCCCCcCCCCCCCCcc
Q psy5539 111 SLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELPNCDTLPKYEVVNGKPTCSHAQLTEMK 179 (653)
Q Consensus 111 ~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp~C~~lp~~~~~~~~~~C~~~~~~~~~ 179 (653)
|+|+|||||.++++++|++||+.+++|+++|+|+++++++.||+|++||..+ .++++|+++++++.+
T Consensus 80 p~plCredC~a~~~~~C~~Ew~~~e~~~~~g~~~~~~~~~~LP~C~~LP~~~--~~~~~C~~i~~~~~~ 146 (147)
T cd07469 80 PKPLCREDCLAVKELFCYKDWALIEENKQRGIYLKSRGHFTLPECESLPSIH--ADPPACSHIPLTDLK 146 (147)
T ss_pred cCchhHHHHHHHHHHHhHHHHHHHHHhhhccccccccccccCCchhhcCCCC--CCCCceeeccccccc
Confidence 9999999999999999999999999999999999999999999999999987 567999999998765
No 23
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.8e-42 Score=355.88 Aligned_cols=264 Identities=34% Similarity=0.586 Sum_probs=227.9
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+..++|++.+.||+|+||.||+|.+.. .......||+|.++..........|.+|+.+++.++||||+++++++..++
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~--~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 79 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKL--PSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN 79 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEec--CCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC
Confidence 455689999999999999999998642 234567899999987766666678999999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+++|+|.+++... ...+++..++.++.||+.||+|||+++++||||||+|||+
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~-------------------~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili 140 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKH-------------------EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV 140 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhC-------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE
Confidence 999999999999999999621 2357899999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++++.+|++|||.+........ .......++..|+|||.+.+..++.++||||||+++||+++.|..||.+.+..++.+
T Consensus 141 ~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~ 219 (266)
T cd05064 141 NSDLVCKISGFRRLQEDKSEAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIK 219 (266)
T ss_pred cCCCcEEECCCcccccccccch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHH
Confidence 9999999999998765322211 111223446789999999999999999999999999999886778999999999888
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
.+.++...+.+..++..+.+++.+||+.+|.+||++++|.+.|..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 220 AVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 8888877777888999999999999999999999999999988654
No 24
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=9e-43 Score=376.55 Aligned_cols=292 Identities=40% Similarity=0.680 Sum_probs=232.9
Q ss_pred cccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEE
Q psy5539 356 KLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLL 434 (653)
Q Consensus 356 ~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~ 434 (653)
....++++.++|++.+.||+|+||.||+|++.+.....++..||||+++........+.+.+|+.+++.+ +||||++++
T Consensus 26 ~~~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~ 105 (375)
T cd05104 26 YDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLL 105 (375)
T ss_pred CccccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeee
Confidence 3445678888999999999999999999987554445567789999998655444556789999999999 899999999
Q ss_pred eEEecCCceEEEEeecCCCChHHHHhhcCCCCCcC----------------------CCcc--------------c----
Q psy5539 435 GVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYIN----------------------GTYS--------------S---- 474 (653)
Q Consensus 435 g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~----------------------~~~~--------------~---- 474 (653)
+++..++..++||||+++|+|.++++......... .+.. .
T Consensus 106 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (375)
T cd05104 106 GACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADK 185 (375)
T ss_pred eeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccc
Confidence 99999999999999999999999997543211000 0000 0
Q ss_pred --------------c-cccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCcccccc
Q psy5539 475 --------------M-ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY 539 (653)
Q Consensus 475 --------------~-~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~ 539 (653)
. .........+++..+++++.||++||+|||+++|+||||||+|||+++++.+||+|||+++...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 186 RRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred ccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 0 0000123468899999999999999999999999999999999999999999999999998654
Q ss_pred ccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCccCCCCCCcHH
Q psy5539 540 LQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH-EEVVKYIKEGNILQAPDNTPDA 618 (653)
Q Consensus 540 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~-~e~~~~i~~~~~~~~~~~~~~~ 618 (653)
............++..|+|||.+.+..++.++||||||+++|||++++..||.+... ....+.+..+.....+...+.+
T Consensus 266 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (375)
T cd05104 266 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSE 345 (375)
T ss_pred CcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHH
Confidence 333222223344567899999999999999999999999999999977889877654 4556666666555556677899
Q ss_pred HHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 619 LYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 619 l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+.+|+.+||+.+|++||++.+|++.|+..
T Consensus 346 l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 346 MYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 99999999999999999999999998753
No 25
>KOG1025|consensus
Probab=100.00 E-value=3.6e-44 Score=388.48 Aligned_cols=263 Identities=35% Similarity=0.628 Sum_probs=237.5
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLL 446 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV 446 (653)
.+..+.||+|+||+||+|.+-.- ...-..+||||++.+....+...++.+|+-+|++++|||+++|+|+|.... +.||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pe-ge~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPE-GENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecC-CceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHH
Confidence 34567799999999999988432 233456899999998888777889999999999999999999999998766 8899
Q ss_pred EeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCc
Q psy5539 447 FEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV 526 (653)
Q Consensus 447 ~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~ 526 (653)
++||+.|+|.+|++.+ ...+-..+++.+..|||+||.|||++++|||||.++||||.+...
T Consensus 776 tq~mP~G~LlDyvr~h-------------------r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~h 836 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREH-------------------RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNH 836 (1177)
T ss_pred HHhcccchHHHHHHHh-------------------hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCe
Confidence 9999999999999843 356778899999999999999999999999999999999999999
Q ss_pred EEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy5539 527 VKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606 (653)
Q Consensus 527 vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~ 606 (653)
+||.|||+++.+..++..........++.|||-|.+....||.+||||||||++||++|.|..||.+...+|+-+.++.|
T Consensus 837 vkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~g 916 (1177)
T KOG1025|consen 837 VKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKG 916 (1177)
T ss_pred EEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcc
Confidence 99999999998876665555556677899999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 607 NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 607 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
+.+..|+.++.+++.+|.+||..|+..||+|+++...+.++.++
T Consensus 917 eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 917 ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999888877654
No 26
>KOG0592|consensus
Probab=100.00 E-value=2.3e-43 Score=369.83 Aligned_cols=257 Identities=23% Similarity=0.340 Sum_probs=226.3
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhC-CCCccceEEeEEe
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEF-DHPNIVKLLGVCA 438 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~ 438 (653)
...++|.+.+.||+|+|++|++|+.. .+++.+|||++.+.- .+.-.+.+.+|-..|.+| .||.|++|+-.|.
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~-----~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ 144 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREK-----ATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ 144 (604)
T ss_pred CChhhcchhheeccccceeEEEeeec-----CCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEee
Confidence 34578999999999999999999863 477899999986542 222334577888999999 8999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
+...+|+|+||+++|+|.++|+ +.+.+++.....++.+|+.||+|||++|||||||||+|
T Consensus 145 D~~sLYFvLe~A~nGdll~~i~--------------------K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPEN 204 (604)
T KOG0592|consen 145 DEESLYFVLEYAPNGDLLDLIK--------------------KYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPEN 204 (604)
T ss_pred cccceEEEEEecCCCcHHHHHH--------------------HhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhh
Confidence 9999999999999999999997 34678999999999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccc---------cCC--CCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCC
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYY---------KGD--ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~---------~~~--~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~ 587 (653)
||||++|.+||+|||.|+.+...... ... ....||..|.+||.+..+..+..+|+|+|||+||+|+. |
T Consensus 205 ILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmla-G 283 (604)
T KOG0592|consen 205 ILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLA-G 283 (604)
T ss_pred eeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhc-C
Confidence 99999999999999999887533221 111 33678999999999999999999999999999999998 6
Q ss_pred CCCCCCCCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 588 LQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 588 ~~p~~~~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+||.+.+.--+++.|.+-.. .+|+..++.+.+|+++.|-.||.+|+|.++|.+|++
T Consensus 284 ~PPFra~NeyliFqkI~~l~y-~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpF 340 (604)
T KOG0592|consen 284 QPPFRAANEYLIFQKIQALDY-EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPF 340 (604)
T ss_pred CCCCccccHHHHHHHHHHhcc-cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcc
Confidence 789999999999999988664 688899999999999999999999999999999975
No 27
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.7e-42 Score=355.46 Aligned_cols=275 Identities=43% Similarity=0.794 Sum_probs=233.1
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++..++|++.+.||+|+||.||+|.+.+.........||||.++.........++.+|+.+++.++|+||+++++++..+
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 45667899999999999999999998664444566889999987654444566789999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...++||||+++|+|.++++...+.... ......+++..++.++.|++.||.|||+.+++|+||||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil 151 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMEN----------NPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCM 151 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccc----------cccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEE
Confidence 9999999999999999999754321100 011245688899999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.++|+|||+++...............++..|||||.+.+..++.++||||||+++|||++++..||.+...++..
T Consensus 152 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~ 231 (277)
T cd05062 152 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVL 231 (277)
T ss_pred EcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999986644443333333455788999999999999999999999999999999877899998888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.+..+.....+..++..+.+++.+||+.+|++|||+.++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 232 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 888887776777889999999999999999999999999998875
No 28
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.6e-42 Score=359.92 Aligned_cols=283 Identities=43% Similarity=0.779 Sum_probs=224.2
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCC-----------CCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCcc
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLL-----------KHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~-----------~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnI 430 (653)
++.++|.+.+.||+|+||.||+|.+.... ....+..||+|.++.........+|.+|+.++.+++||||
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCe
Confidence 45678999999999999999999864321 1234568999999876666667789999999999999999
Q ss_pred ceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCce
Q psy5539 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFV 510 (653)
Q Consensus 431 v~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~iv 510 (653)
+++++++...+..++||||+++|+|.+++............. ...........+++..+++++.||+.||.|||+.+|+
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGN-DAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccc-cccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 999999999999999999999999999997432211100000 0001122345688999999999999999999999999
Q ss_pred ecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhC-CCC
Q psy5539 511 HRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF-ALQ 589 (653)
Q Consensus 511 HrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~-~~~ 589 (653)
||||||+|||+++++.+||+|||+++.....+.........++..|||||.+..+.++.++||||||+++|||+++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999866444433333344557889999999999999999999999999999974 456
Q ss_pred CCCCCCHHHHHHHHHc----C---CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 590 PYYGLTHEEVVKYIKE----G---NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 590 p~~~~~~~e~~~~i~~----~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
||.+.+.+++...+.. . .....+..++..+.+|+.+||+.+|.+|||+.+|.+.|.
T Consensus 241 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 241 PYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 8888777766554432 1 112335568899999999999999999999999988775
No 29
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.3e-42 Score=357.95 Aligned_cols=277 Identities=40% Similarity=0.784 Sum_probs=234.1
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
.+|++.+.||+|+||.||+|+..+.........||+|+++........+.+.+|+.+++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 45677889999999999999976544445678899999987665556677999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+++||+++++|.+++....+...... ..........+++..++.++.|++.||.|||+++|+||||||+|||++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGS----TDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccc----cccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence 99999999999999974433221110 01111123468899999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
+.+||+|||+++.....+.........+++.|+|||.+.++.++.++||||||+++|||++++.+||.+....++.+.+.
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~ 240 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIR 240 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 99999999998866433332223344557789999999999999999999999999999998888999999999999999
Q ss_pred cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.....+..++..+.+++..||+.+|.+||++++|+..|.
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 241 NRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 98887788899999999999999999999999999998875
No 30
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.2e-42 Score=372.02 Aligned_cols=294 Identities=39% Similarity=0.671 Sum_probs=232.3
Q ss_pred ccccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceE
Q psy5539 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKL 433 (653)
Q Consensus 355 ~~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l 433 (653)
+....+.++.++|++.+.||+|+||.||+|+..+.....+...||||+++..........+.+|+++++.+ +|+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~ 107 (374)
T cd05106 28 PYNEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNL 107 (374)
T ss_pred cccccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeE
Confidence 44556678888999999999999999999987654455566789999998765555567789999999999 89999999
Q ss_pred EeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcC-C------------------------------------------
Q psy5539 434 LGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYIN-G------------------------------------------ 470 (653)
Q Consensus 434 ~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~-~------------------------------------------ 470 (653)
++++...+..++||||+++|+|.++++......... .
T Consensus 108 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (374)
T cd05106 108 LGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPV 187 (374)
T ss_pred eeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCc
Confidence 999999999999999999999999997543210000 0
Q ss_pred ------Cc-ccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCcccccccccc
Q psy5539 471 ------TY-SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY 543 (653)
Q Consensus 471 ------~~-~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~ 543 (653)
+. ............+++..+++++.||+.||+|||+++|+||||||+|||+++++.+||+|||+++.......
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 188 SSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred cccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence 00 00000011234588999999999999999999999999999999999999999999999999976533222
Q ss_pred ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCccCCCCCCcHHHHHH
Q psy5539 544 YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE-EVVKYIKEGNILQAPDNTPDALYDL 622 (653)
Q Consensus 544 ~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~-e~~~~i~~~~~~~~~~~~~~~l~~l 622 (653)
........++..|||||++....++.++||||||+++|||++.|..||...... .....+..+.....+...+.++.++
T Consensus 268 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 347 (374)
T cd05106 268 YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSI 347 (374)
T ss_pred eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHH
Confidence 112222345678999999999999999999999999999998667788776543 3444455544445566778999999
Q ss_pred HHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 623 MKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 623 i~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
+.+||+.+|.+||++.+|++.|.++.
T Consensus 348 i~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 348 MKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 99999999999999999999998764
No 31
>KOG0198|consensus
Probab=100.00 E-value=4.6e-43 Score=360.50 Aligned_cols=258 Identities=26% Similarity=0.413 Sum_probs=213.9
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC--c
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK--P 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~--~ 442 (653)
.++...+.||+|+||+||++... .++...|||......... .+.+.+|+.+|.+|+|||||+.+|.....+ .
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~-----~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~ 90 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNK-----KTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDE 90 (313)
T ss_pred chhhhhccccCccceEEEEEEec-----CCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCee
Confidence 34667788999999999999864 236789999987654433 567899999999999999999999855444 6
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
++++|||+++|+|.+++... ...+++..+..+++||++||+|||++|||||||||+||||+
T Consensus 91 ~~i~mEy~~~GsL~~~~~~~-------------------g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~ 151 (313)
T KOG0198|consen 91 YNIFMEYAPGGSLSDLIKRY-------------------GGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD 151 (313)
T ss_pred eEeeeeccCCCcHHHHHHHc-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe
Confidence 99999999999999999722 12699999999999999999999999999999999999999
Q ss_pred C-CCcEEEeccCccccccc-cccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCC-CCHH-
Q psy5539 523 D-QMVVKIADFGLSRKMYL-QDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYG-LTHE- 597 (653)
Q Consensus 523 ~-~~~vkI~DfGla~~~~~-~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~-~~~~- 597 (653)
. ++.+||+|||+++.... ...........||+.|||||++..+ ....++|||||||++.||+|| .+||.. ....
T Consensus 152 ~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg-~~PW~~~~~~~~ 230 (313)
T KOG0198|consen 152 PSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTG-KPPWSEFFEEAE 230 (313)
T ss_pred CCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCC-CCcchhhcchHH
Confidence 9 79999999999987653 1222334457889999999999964 334599999999999999997 678876 3333
Q ss_pred HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 598 e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
.++........+..|+.++.+.++++.+|+..+|++|||++++++|++...
T Consensus 231 ~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 231 ALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred HHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 344444455556788889999999999999999999999999999998654
No 32
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1e-41 Score=354.16 Aligned_cols=284 Identities=66% Similarity=1.135 Sum_probs=238.4
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
++.++|++.+.||+|+||.||+|+..+..+..+...||+|.++.........++.+|+.++++++||||+++++++..+.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 2 YPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred CChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 45678999999999999999999976544456678999999987666666778999999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCC--cccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGT--YSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
..++||||+++|+|.++++...+....... .............+++..++.++.|++.||.|||+++++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 999999999999999999865432211100 000111112234688999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
|+++++.++|+|||+++................+..|+|||.+.+..++.++||||||+++|||++.+.+||.+...+++
T Consensus 162 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~ 241 (288)
T cd05050 162 LVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEV 241 (288)
T ss_pred EecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999997665444333333444567899999999999999999999999999999878889999999999
Q ss_pred HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 600 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
...+..+.....++..+.++.+|+.+||+.+|.+|||+.||++.|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 242 IYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 9999888877778889999999999999999999999999998875
No 33
>KOG4721|consensus
Probab=100.00 E-value=9e-44 Score=372.04 Aligned_cols=252 Identities=35% Similarity=0.568 Sum_probs=217.4
Q ss_pred cccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEE
Q psy5539 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC 437 (653)
Q Consensus 358 ~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~ 437 (653)
+-++++.+.+.-++-||.|+.|.||+|++.+ ..||||++++- -+.+|+-|++|+|+||+.|.|+|
T Consensus 117 e~WeiPFe~IsELeWlGSGaQGAVF~Grl~n-------etVAVKKV~el--------kETdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 117 ELWEIPFEEISELEWLGSGAQGAVFLGRLHN-------ETVAVKKVREL--------KETDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred hhccCCHHHhhhhhhhccCcccceeeeeccC-------ceehhHHHhhh--------hhhhHHHHHhccCcceeeEeeee
Confidence 3456777777778889999999999999754 67999988642 24678899999999999999999
Q ss_pred ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
....-+||||||++.|-|.+.|+ ....++...+..+..+||.||.|||.++|||||||+-
T Consensus 182 tqsPcyCIiMEfCa~GqL~~VLk--------------------a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSP 241 (904)
T KOG4721|consen 182 TQSPCYCIIMEFCAQGQLYEVLK--------------------AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSP 241 (904)
T ss_pred cCCceeEEeeeccccccHHHHHh--------------------ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCC
Confidence 99999999999999999999997 3456888899999999999999999999999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
||||..+..|||+|||-++..... .+.-..+||+.|||||+|.....++|.||||||||||||+|+.. ||.+.+..
T Consensus 242 NiLIs~~d~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~Ei-PYkdVdss 317 (904)
T KOG4721|consen 242 NILISYDDVVKISDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEI-PYKDVDSS 317 (904)
T ss_pred ceEeeccceEEeccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCC-Cccccchh
Confidence 999999999999999999875322 23446789999999999999999999999999999999999655 99877765
Q ss_pred HHHHHHHcC-CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 598 EVVKYIKEG-NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 598 e~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
.++--+-.. ..++.|..+|+.++=||++||+..|..||+|++|+.||.-..
T Consensus 318 AIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 318 AIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred eeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 554333322 235678899999999999999999999999999999986543
No 34
>KOG0200|consensus
Probab=100.00 E-value=3.4e-42 Score=391.46 Aligned_cols=286 Identities=43% Similarity=0.755 Sum_probs=248.5
Q ss_pred ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCc--cceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEe
Q psy5539 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHE--EFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLG 435 (653)
Q Consensus 359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~--~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g 435 (653)
.+|++++++.+.+.||+|+||.|++|...+..... ....||||+++........+.+..|+++|..+ +|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 67899999888889999999999999987654432 36789999999888777888999999999999 5999999999
Q ss_pred EEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539 436 VCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515 (653)
Q Consensus 436 ~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk 515 (653)
.|..++..++|+||+.+|+|.+||+.++......... ........++..+++.++.|||.||+||++.++|||||+
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~----~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLA 445 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSG----VFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLA 445 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccC----CCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhh
Confidence 9999999999999999999999999776111110000 000011359999999999999999999999999999999
Q ss_pred CCCEeEcCCCcEEEeccCccccccccccccCC-CCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKGD-ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~ 594 (653)
++|||+.++..+||+|||+++.....+++... .....|++|||||.+....|+.+||||||||+||||+|.|..||.+.
T Consensus 446 aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~ 525 (609)
T KOG0200|consen 446 ARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI 525 (609)
T ss_pred hhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence 99999999999999999999987766666532 33238899999999999999999999999999999999999999997
Q ss_pred C-HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 595 T-HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 595 ~-~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
. .+++.+.+++|..+..|..++++++++|+.||+.+|++||+|.++.+.+..+.
T Consensus 526 ~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 526 PPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 6 78889999999999999999999999999999999999999999999988753
No 35
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=8e-42 Score=352.92 Aligned_cols=277 Identities=50% Similarity=0.903 Sum_probs=234.5
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
..++|.+.+.||+|+||.||+|+........+...||||.++........+.+.+|++++++++|+||+++++++..+..
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 34568888999999999999998755434456688999999876665566789999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.++++...+..... .........+++..+..++.|++.||.|||+++++||||||+|||++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~ 156 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFL------KSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG 156 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhh------cccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc
Confidence 999999999999999998554321100 00112335689999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++.+..||.+.+.++..+.
T Consensus 157 ~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05049 157 YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIEC 236 (280)
T ss_pred CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 99999999999998654443333334445678899999999999999999999999999999967779988888899998
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+..+.....+...+..+.+++++||+.+|++||++.+|++.|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 237 ITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 8888777777789999999999999999999999999998874
No 36
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.5e-41 Score=349.30 Aligned_cols=279 Identities=43% Similarity=0.834 Sum_probs=232.1
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
..++|++.+.||+|+||.||+|.... .....+..|++|.++..........+.+|++++++++||||+++++++..+..
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYL-PGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEec-CCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 34678999999999999999998521 12345678999999865555556789999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++....+........ .........+++.+++.++.|++.||+|||+++++||||||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~ 158 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSS---DEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG 158 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCcccccc---ccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence 999999999999999997554322111100 00011234588999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++.+.+||.+....++.+.
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 99999999999998764443333333444567899999999889999999999999999999978889998888888998
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+..+..+..+..++..+.+++.+||+.+|.+||++.+|.++|.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 239 VRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 8888877778889999999999999999999999999998875
No 37
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.3e-41 Score=348.94 Aligned_cols=275 Identities=43% Similarity=0.815 Sum_probs=236.2
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++..++|.+.+.||+|+||.||+|...+.........||+|.+...........+.+|+.++..++|+||+++++++...
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG 81 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence 56678899999999999999999998654434556889999997665555566789999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...++||||+++|+|.+++....+... .......+++..++.++.|++.||.|||+.+++||||||+|||
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nil 151 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAE----------NNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCM 151 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchh----------hccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEE
Confidence 999999999999999999975432110 0122345789999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.+||+|||+++.+...+.........++..|+|||.+..+.++.++||||||+++|||++++.+||.+.+..+..
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 231 (277)
T cd05032 152 VAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVL 231 (277)
T ss_pred EcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHH
Confidence 99999999999999987654443333344556788999999998899999999999999999999778899999999998
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.+..+.....+..++.++.+++.+||+.+|++|||+.+|++.|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 232 KFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 888887777778889999999999999999999999999988774
No 38
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.3e-41 Score=367.68 Aligned_cols=294 Identities=38% Similarity=0.654 Sum_probs=235.9
Q ss_pred ccccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceE
Q psy5539 355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKL 433 (653)
Q Consensus 355 ~~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l 433 (653)
+....+++++++|.+.+.||+|+||.||+|++.+.........||||+++........+.+.+|++++++++ ||||+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l 106 (400)
T cd05105 27 PYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL 106 (400)
T ss_pred CCCCceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 445667888999999999999999999999976544445567899999987666666678999999999996 9999999
Q ss_pred EeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCC---------------------Cc--------------------
Q psy5539 434 LGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYING---------------------TY-------------------- 472 (653)
Q Consensus 434 ~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~---------------------~~-------------------- 472 (653)
++++...+..+|||||+++|+|.++|+.......... .+
T Consensus 107 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (400)
T cd05105 107 LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTT 186 (400)
T ss_pred EEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccc
Confidence 9999999999999999999999999976432100000 00
Q ss_pred ---------------------------------ccccc--cccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 473 ---------------------------------SSMES--SIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 473 ---------------------------------~~~~~--~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
..+.. .......+++..++.++.||++||+|||+.+|+||||||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~ 266 (400)
T cd05105 187 QYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAAR 266 (400)
T ss_pred ccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChH
Confidence 00000 0011235889999999999999999999999999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH- 596 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~- 596 (653)
|||+++++.+||+|||+++...............++..|||||.+.+..++.++||||||+++|||++.+..||.+...
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~ 346 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD 346 (400)
T ss_pred hEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh
Confidence 9999999999999999998654333222233345677899999999999999999999999999999866668876544
Q ss_pred HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 597 ~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
..+...+..+.....+..++.++.+++.+||+.+|++||++.+|.+.|..+.
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 347 STFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 4455666666556667788999999999999999999999999999998764
No 39
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=3.1e-41 Score=351.32 Aligned_cols=286 Identities=41% Similarity=0.741 Sum_probs=240.1
Q ss_pred ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEE
Q psy5539 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVC 437 (653)
Q Consensus 359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~ 437 (653)
.+++..++|++.+.||+|+||.||++...+.........+|+|.++.........++.+|+.++.++ +|+||+++++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3477788999999999999999999987654333455789999998665555556789999999999 899999999999
Q ss_pred ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
..++..+++|||+++|+|.++++...+...... ..........+++..++.++.|++.||.|||+++|+||||||+
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~ 161 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYAS----PDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAAR 161 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccc----cccccccccccCHHHHHHHHHHHHHHHHHHHHCCcccccccee
Confidence 999999999999999999999986543322111 1111123457899999999999999999999999999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
|||+++++.+||+|||+++.+.............++..|+|||.+.+..++.++||||||+++|||++.+..||.+....
T Consensus 162 Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 162 NVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred eEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 99999999999999999986544333233333445678999999999999999999999999999999777899998888
Q ss_pred HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 598 e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
++.+.+..+.....+..++..+.+|+.+||..+|++|||+.++++.|..+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 242 ELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 888888888776777788999999999999999999999999999998764
No 40
>KOG0199|consensus
Probab=100.00 E-value=7.3e-43 Score=372.71 Aligned_cols=265 Identities=35% Similarity=0.619 Sum_probs=236.9
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
-|+.+++...++||+|.||.|++|.+.. ...+...||||.++.........+|.+|+.+|.+|+|+|+++|||+..+
T Consensus 106 lIpee~i~l~e~LG~GsFgvV~rg~Wt~--psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~- 182 (1039)
T KOG0199|consen 106 LIPEEQIKLYELLGEGSFGVVKRGTWTQ--PSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD- 182 (1039)
T ss_pred eccHHHHHHHHHhcCcceeeEeeccccC--CCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-
Confidence 3556677788899999999999999964 5566678999999977555567799999999999999999999999887
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
..+.||||.++.|+|.+.|+.. ....|....+..++.|||.||.||.++++|||||.++|+|
T Consensus 183 qp~mMV~ELaplGSLldrLrka------------------~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNll 244 (1039)
T KOG0199|consen 183 QPAMMVFELAPLGSLLDRLRKA------------------KKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLL 244 (1039)
T ss_pred chhhHHhhhcccchHHHHHhhc------------------cccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhe
Confidence 7889999999999999999831 2345777888999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCcccccccc-ccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQ-DYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
|-....|||+||||++-+... +.+.-......++.|-|||.+....|+.+||||+|||+||||||+|..||.|....++
T Consensus 245 lasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI 324 (1039)
T KOG0199|consen 245 LASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI 324 (1039)
T ss_pred ecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH
Confidence 999999999999999877543 4444556677889999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 600 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
++.|.++++++.|+.|++++|++|+.||..+|.+||||..|.+.+..
T Consensus 325 L~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 325 LKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred HHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 99999999999999999999999999999999999999999865543
No 41
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.6e-41 Score=345.75 Aligned_cols=264 Identities=38% Similarity=0.702 Sum_probs=228.4
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
..++|.+.+.||+|+||.||+|++.. .......||||.++.........+|.+|+.++++++||||+++++++..++.
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~--~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 79 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKL--PGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRP 79 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEcc--CCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCc
Confidence 34678999999999999999998753 2234568999999876666667789999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++++|.+++... ...+++..++.++.|++.||+|||+++|+|+||||+|||++
T Consensus 80 ~~iv~e~~~~~~L~~~~~~~-------------------~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~ 140 (266)
T cd05033 80 VMIITEYMENGSLDKFLREN-------------------DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN 140 (266)
T ss_pred eEEEEEcCCCCCHHHHHHhc-------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc
Confidence 99999999999999998621 23678999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.++|+|||+++................+..|+|||.+.+..++.++||||||+++|||++.+..||......++.+.
T Consensus 141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~ 220 (266)
T cd05033 141 SNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKA 220 (266)
T ss_pred CCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Confidence 99999999999998764222212222344567899999999999999999999999999999967779988888888888
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+..+...+.+..++..+.+++.+||+.+|++||++++|+++|.++
T Consensus 221 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 221 VEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 887766666778899999999999999999999999999999865
No 42
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.9e-41 Score=356.01 Aligned_cols=267 Identities=33% Similarity=0.608 Sum_probs=225.5
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+..++|+..+.||+|+||.||+|++... .......||+|.++........+++.+|+.+++.++||||++++|++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~- 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPE-GEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecC-CCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence 3456799999999999999999986431 12234569999998665556667899999999999999999999998764
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++|+||+++|+|.++++.. ...+++..++.++.||+.||+|||+++|+||||||+|||+
T Consensus 82 ~~~~v~e~~~~g~l~~~l~~~-------------------~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill 142 (316)
T cd05108 82 TVQLITQLMPFGCLLDYVREH-------------------KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV 142 (316)
T ss_pred CceeeeecCCCCCHHHHHHhc-------------------cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe
Confidence 578999999999999999721 2357888999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++++.+||+|||+++................+..|+|||.+....++.++||||||+++|||++.+..||.+....++..
T Consensus 143 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~ 222 (316)
T cd05108 143 KTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 222 (316)
T ss_pred cCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 99999999999999866433222222333456789999999999999999999999999999997778998888888877
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
.+..+.....+..++.++.+++.+||..+|.+||++.+++..+..+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 223 ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 777777666777888999999999999999999999999999887754
No 43
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.3e-41 Score=348.53 Aligned_cols=280 Identities=47% Similarity=0.890 Sum_probs=235.3
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
.+++|.+.+.||+|+||+||++.........+...+|+|.++... ....+.+.+|++++++++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 456789999999999999999986443334556789999987643 3445679999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++++|.+++....+.... .........+++..++.++.|++.||+|||+++++||||||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~ 154 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVL-------MAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG 154 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCcccc-------ccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc
Confidence 99999999999999999754432110 00112234589999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++++.+||......+....
T Consensus 155 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~ 234 (288)
T cd05093 155 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 234 (288)
T ss_pred cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99999999999998654333222223344567899999999999999999999999999999977889998888888899
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
+..+.....+..++.++.+++.+||+.+|.+|||+.++++.|..+.+.
T Consensus 235 i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 235 ITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 988877677778899999999999999999999999999999988764
No 44
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5e-41 Score=349.28 Aligned_cols=277 Identities=42% Similarity=0.783 Sum_probs=233.6
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++..++|++.+.||+|+||.||+|.............||+|.++..........+.+|+.++++++||||+++++++...
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 56678899999999999999999986543344556789999987655444556788999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...++||||+++|+|.++++...+... .......+++..++.++.|++.||.|||+++|+||||||+|||
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nil 151 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAE----------NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCM 151 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccc----------cCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEE
Confidence 999999999999999999975432110 0112345678889999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.++|+|||+++...............++..|+|||.+.++.++.++||||||+++|||++++..||.+...+++.
T Consensus 152 i~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~ 231 (288)
T cd05061 152 VAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 231 (288)
T ss_pred EcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999986644433333333445678999999999999999999999999999999888899998888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+.+..+.....+..++..+.+++.+||+.+|++|||+.++++.+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 232 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 88888777777778899999999999999999999999999887754
No 45
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=7.7e-41 Score=345.78 Aligned_cols=272 Identities=41% Similarity=0.763 Sum_probs=229.0
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++..++|.+.+.||+|+||.||+|.+...........||+|.++..........|.+|+.++++++|+||+++++++...
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 2 EVPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CCCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 34567899999999999999999987542222356789999988665555567799999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..++||||+++|+|.+++....+.. .....+++..++.++.||+.||+|||+++++|+||||+|||
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~-------------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil 148 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRP-------------ERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCL 148 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEE
Confidence 99999999999999999997543211 12245899999999999999999999999999999999999
Q ss_pred EcCCC---cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 521 INDQM---VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 521 l~~~~---~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
+++++ .+||+|||+++................+..|+|||.+.+..++.++||||||+++|||++.+..||.+.+.+
T Consensus 149 ~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~ 228 (277)
T cd05036 149 LTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ 228 (277)
T ss_pred EeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 98754 699999999987643333222223344678999999999999999999999999999998788899998888
Q ss_pred HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 598 e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
++.+.+........+..++..+.+++.+||+.+|++||++.+|+++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 229 EVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 888888776666667788999999999999999999999999999875
No 46
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.1e-41 Score=350.71 Aligned_cols=288 Identities=41% Similarity=0.717 Sum_probs=236.7
Q ss_pred ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCC--ccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEe
Q psy5539 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKH--EEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLG 435 (653)
Q Consensus 359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~--~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g 435 (653)
..++..++|.+.+.||+|+||.||+|+..+.... .....+|+|.++.........++.+|+++++.+ +|+||+++++
T Consensus 12 ~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (307)
T cd05098 12 RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLG 91 (307)
T ss_pred cceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 4466678899999999999999999987542221 234679999998655445556788999999999 7999999999
Q ss_pred EEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539 436 VCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515 (653)
Q Consensus 436 ~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk 515 (653)
++...+..++||||+++|+|.+++....+....... .........+++.++++++.|++.||+|||+++++|||||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 167 (307)
T cd05098 92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCY----NPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA 167 (307)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCccccccc----ccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 999999999999999999999999865432211000 0001123458999999999999999999999999999999
Q ss_pred CCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
|+|||+++++.+||+|||+++.....+.........++..|||||.+.+..++.++||||||+++|||++++..||.+..
T Consensus 168 p~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~ 247 (307)
T cd05098 168 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247 (307)
T ss_pred HHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 99999999999999999998765332222222233445789999999999999999999999999999997888998888
Q ss_pred HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 596 ~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
.+++.+.+..+.....+..++.++.+++.+||..+|++||++.+|++.|.++...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 8888888888776677788899999999999999999999999999999988764
No 47
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.1e-40 Score=347.34 Aligned_cols=283 Identities=46% Similarity=0.862 Sum_probs=236.1
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
...+|.+.+.||+|+||.||+|+..+.....+...+++|.++.... ...+.+.+|++++++++|+||+++++++..++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-AARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 4467889999999999999999875544445667899999876443 334678999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++++|.++++...+...... ..........+++..++.++.||+.||+|||+++|+||||||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~ 157 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILV----DGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG 157 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCccccccc----ccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc
Confidence 9999999999999999986543211000 000011234589999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.++|+|||++................++..|+|||.+.+..++.++||||||+++|||++++..||...+..++.+.
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 237 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 237 (291)
T ss_pred cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99999999999997664433322333445678899999999999999999999999999999977789988888888888
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
+..+.....+..++..+.+++.+||+.+|++||++++|++.|..+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 238 ITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 888877777778899999999999999999999999999999988654
No 48
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.6e-41 Score=358.83 Aligned_cols=290 Identities=39% Similarity=0.676 Sum_probs=229.9
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEe
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCA 438 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~ 438 (653)
++++.++|++.+.||+|+||.||+|...+.....+++.||+|+++........+.+.+|+.++.++ +|+||+++++++.
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 467788999999999999999999987654455567899999998655444556788999999999 8999999999886
Q ss_pred c-CCceEEEEeecCCCChHHHHhhcCCCCCcCCCc-----------------cc------------------------cc
Q psy5539 439 V-GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY-----------------SS------------------------ME 476 (653)
Q Consensus 439 ~-~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~-----------------~~------------------------~~ 476 (653)
. +...+++|||+++|+|.+++............- .+ ..
T Consensus 82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 4 457889999999999999997543211000000 00 00
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCcccc
Q psy5539 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRW 556 (653)
Q Consensus 477 ~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y 556 (653)
........+++..+..++.||+.||+|||+++|+||||||+|||+++++.+||+|||+++.+.............++..|
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 00001236899999999999999999999999999999999999999999999999999876433322222334556789
Q ss_pred ccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC
Q psy5539 557 MPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH-EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP 635 (653)
Q Consensus 557 ~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~-~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 635 (653)
||||.+.+..++.++||||||+++|||++.+..||.+... +.....+..+.....+...+.++.+++.+||+.+|++||
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP 321 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRP 321 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCc
Confidence 9999999999999999999999999999866778876544 344555666655566677889999999999999999999
Q ss_pred CHHHHHHHHHHHHH
Q psy5539 636 SFRTIYQTLWNIKR 649 (653)
Q Consensus 636 s~~eil~~L~~l~~ 649 (653)
++.+|+++|..+.+
T Consensus 322 s~~ell~~l~~~~~ 335 (337)
T cd05054 322 TFSELVEILGDLLQ 335 (337)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999998765
No 49
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.4e-40 Score=346.20 Aligned_cols=284 Identities=39% Similarity=0.671 Sum_probs=231.4
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
+|++.+.||+|+||.||+|+............+++|.++..........+.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 35778899999999999998754333445578999999876555555679999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCC----CcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYING----TYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
++||+.+|+|.+++........... ...+..........+++..++.++.|++.||+|||+.+++||||||+|||+
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill 160 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV 160 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence 9999999999999975432110000 000000111223468999999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++++..||.+...+++.+
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~ 240 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN 240 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 99999999999999765433322222334557789999999989999999999999999999996777999989999888
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
.+..+.....+...+.++.+++..||+.+|++||++.++++.|..+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 241 LLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 888776666677889999999999999999999999999999988754
No 50
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-40 Score=348.06 Aligned_cols=287 Identities=39% Similarity=0.711 Sum_probs=237.4
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCC--CCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeE
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLL--KHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGV 436 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~--~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~ 436 (653)
+++..++|.+.+.||+|+||.||+|+..+.. ...+...||+|.++.........++.+|+.+++.+ +||||++++++
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 3566778999999999999999999864321 12345689999998655455567899999999999 89999999999
Q ss_pred EecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 437 CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 437 ~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
+......++||||+++|+|.+++...++...... ..-.......+++..++.++.||+.||.|||+++++||||||
T Consensus 90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp 165 (304)
T cd05101 90 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS----YDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAA 165 (304)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccc----cccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeeccccc
Confidence 9999999999999999999999986543221100 000011234689999999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+|||+++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++++..|+.+.+.
T Consensus 166 ~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 245 (304)
T cd05101 166 RNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 245 (304)
T ss_pred ceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence 99999999999999999998664333332333345567899999999999999999999999999999977789999999
Q ss_pred HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 597 ~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
.++.+.+..+.....+..++..+.+++.+||+.+|.+||++.+|++.|.++..-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 246 EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 999999888777667778999999999999999999999999999999887653
No 51
>KOG3653|consensus
Probab=100.00 E-value=3.5e-41 Score=348.24 Aligned_cols=252 Identities=26% Similarity=0.432 Sum_probs=201.2
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhh--CCCCccceEEeEEecCC--
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE--FDHPNIVKLLGVCAVGK-- 441 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~--l~HpnIv~l~g~~~~~~-- 441 (653)
.+++.+.||+|+||.||||++.+ +.||||++.... .+.|..|-+|.+. ++|+||++++++-..+.
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~-------~~VAVKifp~~~----kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~ 279 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDN-------RLVAVKIFPEQE----KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD 279 (534)
T ss_pred chhhHHHhhcCccceeehhhccC-------ceeEEEecCHHH----HHHHHhHHHHHhccCccchhHHHhhchhccCCcc
Confidence 45677889999999999998743 789999998653 3456666666554 68999999999876655
Q ss_pred --ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC---------Cce
Q psy5539 442 --PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR---------KFV 510 (653)
Q Consensus 442 --~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~---------~iv 510 (653)
..+||+||.+.|+|.+||+. ..++|.+..+|+..+++||+|||+. .|+
T Consensus 280 ~~eywLVt~fh~kGsL~dyL~~---------------------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~Ia 338 (534)
T KOG3653|consen 280 RMEYWLVTEFHPKGSLCDYLKA---------------------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIA 338 (534)
T ss_pred ccceeEEeeeccCCcHHHHHHh---------------------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccc
Confidence 89999999999999999972 4589999999999999999999963 699
Q ss_pred ecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCC-C-----CCchhHHHHHHHHHHHH
Q psy5539 511 HRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK-Y-----TVESDVWAFGVCLWEIF 584 (653)
Q Consensus 511 HrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~-----t~ksDVwSlGvvl~ell 584 (653)
|||||++||||.+|++..|+|||||..+.............||.||||||++.+.. + -.+.||||+|.|||||+
T Consensus 339 HRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~ 418 (534)
T KOG3653|consen 339 HRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIA 418 (534)
T ss_pred cccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998876444333444578999999999997652 2 25789999999999999
Q ss_pred hCCC-------CCCC---------CCCHHHHHHHH-HcCCccCCCCC-----CcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy5539 585 SFAL-------QPYY---------GLTHEEVVKYI-KEGNILQAPDN-----TPDALYDLMKLCWNMKPMNRPSFRTIYQ 642 (653)
Q Consensus 585 t~~~-------~p~~---------~~~~~e~~~~i-~~~~~~~~~~~-----~~~~l~~li~~cl~~dP~~RPs~~eil~ 642 (653)
++.. ++|+ ..+.+++.+.+ +++.++..|+. -...+++.+..||+.||+.|.|+.-+.+
T Consensus 419 SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~e 498 (534)
T KOG3653|consen 419 SRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEE 498 (534)
T ss_pred hhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHH
Confidence 8443 2222 12344554444 34444555543 3467899999999999999999999999
Q ss_pred HHHHHHH
Q psy5539 643 TLWNIKR 649 (653)
Q Consensus 643 ~L~~l~~ 649 (653)
+++++..
T Consensus 499 R~~~l~~ 505 (534)
T KOG3653|consen 499 RMAELMM 505 (534)
T ss_pred HHHHHhc
Confidence 9988754
No 52
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.8e-40 Score=343.55 Aligned_cols=267 Identities=32% Similarity=0.596 Sum_probs=223.9
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
..++|++.+.||+|+||.||+|.+... .......+++|.+..........++..|+.++++++||||+++++++. +..
T Consensus 5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~ 82 (279)
T cd05111 5 KETELRKLKLLGSGVFGTVHKGIWIPE-GDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GAS 82 (279)
T ss_pred CHhhceeccccCccCCcceEEEEEcCC-CCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCc
Confidence 446788899999999999999987321 111224688999876554445567888999999999999999999875 456
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++++||+++|+|.+++... ...+++..++.++.||+.||+|||+++++||||||+|||++
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~-------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~ 143 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQH-------------------RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK 143 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhc-------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc
Confidence 78999999999999999622 24578999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||+++.....+.........++..|+|||.+.++.++.++||||||+++|||++.+..||.+....++.+.
T Consensus 144 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~ 223 (279)
T cd05111 144 SDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL 223 (279)
T ss_pred CCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 99999999999998654332222223345677899999999999999999999999999999977789998888888888
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
+..+.....+..++.++.+++.+||..+|++|||+.++++.|..+.++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 224 LEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 888877777777889999999999999999999999999998887654
No 53
>KOG0583|consensus
Probab=100.00 E-value=6.4e-41 Score=357.56 Aligned_cols=258 Identities=26% Similarity=0.371 Sum_probs=223.8
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc----ccHHHHHHHHHHHHHHhhCC-CCccceEEeE
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE----ASEYLQTDFEREACLLAEFD-HPNIVKLLGV 436 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~----~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~ 436 (653)
...+.|.+.+.||+|+||+|++|+.. .++..||||.+... ......+.+.+|+.++++++ ||||++++.+
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~-----~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev 88 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHR-----LTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEV 88 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeec-----cCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEE
Confidence 44568899999999999999999864 35589999977553 11134556779999999999 9999999999
Q ss_pred EecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 437 CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 437 ~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
+......++||||+.+|+|.+++.. .+.+.+.++.+++.|+++|++|+|++||+||||||
T Consensus 89 ~~t~~~~~ivmEy~~gGdL~~~i~~--------------------~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ 148 (370)
T KOG0583|consen 89 FATPTKIYIVMEYCSGGDLFDYIVN--------------------KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKP 148 (370)
T ss_pred EecCCeEEEEEEecCCccHHHHHHH--------------------cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCH
Confidence 9999999999999999999999972 45688899999999999999999999999999999
Q ss_pred CCEeEcCC-CcEEEeccCccccccccccccCCCCCCCccccccchhhccCC-CC-CchhHHHHHHHHHHHHhCCCCCCCC
Q psy5539 517 RNCLINDQ-MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK-YT-VESDVWAFGVCLWEIFSFALQPYYG 593 (653)
Q Consensus 517 ~NILl~~~-~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~t-~ksDVwSlGvvl~ellt~~~~p~~~ 593 (653)
+|||++.+ +++||+|||++.... ..........|++.|+|||++.+.. |+ .++||||+||+||-|++|. .||.+
T Consensus 149 ENilld~~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~-~PF~d 225 (370)
T KOG0583|consen 149 ENILLDGNEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR-LPFDD 225 (370)
T ss_pred HHEEecCCCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC-CCCCC
Confidence 99999999 999999999998653 1112335567899999999999977 76 8999999999999999955 49999
Q ss_pred CCHHHHHHHHHcCCccCCCCCC-cHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 594 LTHEEVVKYIKEGNILQAPDNT-PDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 594 ~~~~e~~~~i~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
.+...+...|..+.. .+|..+ +.++.+|+++|+..+|.+|+|+.+|+++.|-..
T Consensus 226 ~~~~~l~~ki~~~~~-~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 226 SNVPNLYRKIRKGEF-KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ccHHHHHHHHhcCCc-cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 888888888888764 577777 999999999999999999999999999988654
No 54
>KOG0600|consensus
Probab=100.00 E-value=5.2e-42 Score=357.04 Aligned_cols=255 Identities=27% Similarity=0.422 Sum_probs=211.2
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC--
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG-- 440 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~-- 440 (653)
.+.|+.+++||+|+||.||+|+. ..++++||+|+++-+. .+.......|||.||++|+||||++|.+...+.
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~-----~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~ 190 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARD-----LETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLS 190 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeee-----cccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCC
Confidence 45678888999999999999985 4678999999998554 333445678999999999999999999998765
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
..+|||||||++ ||..++. ...-.+++.++..++.||+.||+|+|++||+|||||.+|||
T Consensus 191 ~siYlVFeYMdh-DL~GLl~-------------------~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiL 250 (560)
T KOG0600|consen 191 GSIYLVFEYMDH-DLSGLLS-------------------SPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNIL 250 (560)
T ss_pred ceEEEEEecccc-hhhhhhc-------------------CCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceE
Confidence 789999999988 8888875 22346899999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
||.+|.+||+|||||+...... ...-+....|..|.|||.+++. .|+.+.|+||.||||.||+. |.+.+.|.+.-+.
T Consensus 251 idn~G~LKiaDFGLAr~y~~~~-~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~-gkPI~~G~tEveQ 328 (560)
T KOG0600|consen 251 IDNNGVLKIADFGLARFYTPSG-SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFL-GKPILQGRTEVEQ 328 (560)
T ss_pred EcCCCCEEeccccceeeccCCC-CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHc-CCCCcCCccHHHH
Confidence 9999999999999998654333 2335667889999999999876 79999999999999999998 5678888887665
Q ss_pred HHHHHc--CC-----cc--CC-------------------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 600 VKYIKE--GN-----IL--QA-------------------PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 600 ~~~i~~--~~-----~~--~~-------------------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
++.|-. |. .. .. ....++...+|+..+|..||.+|.|+.+++++-+
T Consensus 329 l~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~sey 402 (560)
T KOG0600|consen 329 LHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEY 402 (560)
T ss_pred HHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcc
Confidence 555522 00 00 11 1245678889999999999999999999987643
No 55
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.3e-40 Score=355.39 Aligned_cols=291 Identities=39% Similarity=0.678 Sum_probs=229.7
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEe
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCA 438 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~ 438 (653)
++++.++|++.+.||+|+||.||+|.+.+.....+++.||||+++..........+.+|+.++.++ +|+||+++++++.
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 467788999999999999999999987655455677899999998655444556788999999999 6899999999886
Q ss_pred c-CCceEEEEeecCCCChHHHHhhcCCCCCcCCC--------------c----------------------------ccc
Q psy5539 439 V-GKPMCLLFEYMGRGDLNDFLRICSPNNYINGT--------------Y----------------------------SSM 475 (653)
Q Consensus 439 ~-~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~--------------~----------------------------~~~ 475 (653)
. +...++||||+++|+|.++++........... . ...
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 4 45689999999999999999754321100000 0 000
Q ss_pred -----cccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCC
Q psy5539 476 -----ESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDEND 550 (653)
Q Consensus 476 -----~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~ 550 (653)
.........+++..+..++.||++||+|||+++|+||||||+|||+++++.+||+|||++...............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 000001235788999999999999999999999999999999999999999999999999765332222222233
Q ss_pred CCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhcc
Q psy5539 551 AIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH-EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNM 629 (653)
Q Consensus 551 ~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~-~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~ 629 (653)
.++..|+|||.+.+..++.++||||||+++|||++.+..||.+... .+....+..+.....+...++++.+++..||+.
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~ 321 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHG 321 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccC
Confidence 4567899999999999999999999999999999877778876543 445556666666666677888999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHH
Q psy5539 630 KPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 630 dP~~RPs~~eil~~L~~l~~~ 650 (653)
+|.+|||+.+|+++|..+.+.
T Consensus 322 ~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 322 EPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred ChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999988653
No 56
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.8e-40 Score=347.24 Aligned_cols=288 Identities=40% Similarity=0.731 Sum_probs=236.6
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCC--CccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeE
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLK--HEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGV 436 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~--~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~ 436 (653)
++++.++|.+.+.||+|+||.||+|+..+... ......+|+|.++.........++.+|+.+++++ +||||++++++
T Consensus 7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 46677889999999999999999998643221 2345679999998655555566789999999999 69999999999
Q ss_pred EecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 437 CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 437 ~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
+..++..++||||+++|+|.+++....+...... ..........+++.++++++.||+.||.|||+++++||||||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp 162 (314)
T cd05099 87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYT----FDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAA 162 (314)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCCccccc----ccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccc
Confidence 9999999999999999999999986443211000 000011234689999999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+|||+++++.+||+|||+++.....+.........++..|||||.+.+..++.++||||||+++|||++++..||.+...
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred eeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999999998654333222222333456799999999999999999999999999999977789999998
Q ss_pred HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q psy5539 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL 651 (653)
Q Consensus 597 ~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l 651 (653)
+++...+..+.....+..++.++.+++.+||+.+|++||++.++++.|..+...+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 243 EELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 9999988887766777888999999999999999999999999999999887543
No 57
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.1e-40 Score=341.48 Aligned_cols=268 Identities=33% Similarity=0.619 Sum_probs=226.0
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+..++|++.+.||+|+||.||+|+..... ......||+|+++.........++.+|+.++..++|+||+++++++.. .
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~-~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~ 81 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDG-ENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-S 81 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCC-CccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-C
Confidence 34568899999999999999999864311 112346899999876666667789999999999999999999999875 4
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++++||+++|+|.++++. ....+++..++.++.||+.||+|||+++|+||||||+|||+
T Consensus 82 ~~~l~~~~~~~g~l~~~l~~-------------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~ 142 (279)
T cd05109 82 TVQLVTQLMPYGCLLDYVRE-------------------NKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV 142 (279)
T ss_pred CcEEEEEcCCCCCHHHHHhh-------------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE
Confidence 57899999999999999862 12458899999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++++.+||......++..
T Consensus 143 ~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~ 222 (279)
T cd05109 143 KSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD 222 (279)
T ss_pred cCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 99999999999999865432222122233456789999999999999999999999999999997888998888888888
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
.+..+.....+..++.++.+++.+||+.+|++||++.++++.+..+.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 223 LLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred HHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 8888776666778899999999999999999999999999998877653
No 58
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.8e-40 Score=338.81 Aligned_cols=261 Identities=40% Similarity=0.791 Sum_probs=224.4
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++...+|.+.+.||+|+||.||+|... ..+..||+|.++.... ...++.+|++++++++|+||+++++++...
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~K~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 74 (263)
T cd05052 2 EMERTDITMKHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTRE 74 (263)
T ss_pred CCchHHeEEeeecCCcccceEEEEEEe-----cCCceEEEEEecCCch--HHHHHHHHHHHHHhCCCCChhheEEEEcCC
Confidence 456678899999999999999999863 3467899999875432 345788999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..++||||+++++|.+++... ....+++..++.++.|++.||+|||+++++||||||+|||
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~------------------~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil 136 (263)
T cd05052 75 PPFYIITEFMTYGNLLDYLREC------------------NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 136 (263)
T ss_pred CCcEEEEEeCCCCcHHHHHHhC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEE
Confidence 9999999999999999998622 1245789999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.+||+|||++........ ........+..|+|||.+.+..++.++||||||+++|||++++..|+.+.+.++..
T Consensus 137 ~~~~~~~kl~df~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~ 215 (263)
T cd05052 137 VGENHLVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 215 (263)
T ss_pred EcCCCcEEeCCCcccccccccee-eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999976533221 11222334678999999999999999999999999999999777899988888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
..+..+.....+..++.++.+++.+||+.+|++||++.++++.|..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 216 ELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 88877665667778899999999999999999999999999998765
No 59
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.7e-40 Score=359.30 Aligned_cols=291 Identities=37% Similarity=0.655 Sum_probs=232.3
Q ss_pred cccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeE
Q psy5539 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGV 436 (653)
Q Consensus 358 ~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~ 436 (653)
..++++.+++.+.+.||+|+||.||+|++.+.........||||+++........+.+.+|++++.++. ||||++++++
T Consensus 30 ~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 30 SAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred CcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 346788889999999999999999999987654445667899999987655555567899999999997 9999999999
Q ss_pred EecCCceEEEEeecCCCChHHHHhhcCCCCCcC------C----------------------------------------
Q psy5539 437 CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYIN------G---------------------------------------- 470 (653)
Q Consensus 437 ~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~------~---------------------------------------- 470 (653)
+...+..++||||+++|+|.++++......... .
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 999999999999999999999998653210000 0
Q ss_pred --------------------------------CcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 471 --------------------------------TYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 471 --------------------------------~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
..............+++..++.++.||+.||+|||+.+++||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 000000011223468889999999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
||+++++.+||+|||+++...............++..|||||.+....++.++||||||+++|||++++..||......+
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~ 349 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE 349 (401)
T ss_pred EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH
Confidence 99999999999999999765332222222233467889999999999999999999999999999996666887655444
Q ss_pred -HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 599 -VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 599 -~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
....+..+..+..+..++.++.+++.+||+.+|.+||++++|++.|..+.
T Consensus 350 ~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 QFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 44555555555667778999999999999999999999999999998764
No 60
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.9e-40 Score=337.13 Aligned_cols=253 Identities=35% Similarity=0.704 Sum_probs=217.6
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.++|++.+.||+|+||.||+|+.. +...+|+|.++.... ...++.+|+.++++++||||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~------~~~~~a~K~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 74 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWR------AQIKVAIKAINEGAM--SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPL 74 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEec------cCceEEEEecccCCc--cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCE
Confidence 457888999999999999999863 235799998875432 235688999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++|+|.++++.. ...+++..++.++.|++.||+|||+++|+||||||+||++++
T Consensus 75 ~iv~e~~~~~~L~~~~~~~-------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~ 135 (256)
T cd05114 75 YIVTEFMENGCLLNYLRQR-------------------QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS 135 (256)
T ss_pred EEEEEcCCCCcHHHHHHhC-------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC
Confidence 9999999999999998621 234788999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++++..||...+..+....+
T Consensus 136 ~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i 214 (256)
T cd05114 136 TGVVKVSDFGMTRYVLDDEY-TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMI 214 (256)
T ss_pred CCeEEECCCCCccccCCCce-eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 99999999999876532222 12223345678999999998899999999999999999999777899998888888888
Q ss_pred HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
..+.....+...+.++.+++.+||+.+|++||++.++++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 215 SRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 88776666777889999999999999999999999998875
No 61
>KOG0661|consensus
Probab=100.00 E-value=3.6e-42 Score=355.87 Aligned_cols=253 Identities=29% Similarity=0.425 Sum_probs=209.1
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeEEecCC-
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGVCAVGK- 441 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~- 441 (653)
-++|..+++||.|+||.||+|+. .+++..||||+++.......+-.-.||+..|++|+ |||||+|..++.+.+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~-----~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~ 83 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKS-----KETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR 83 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeee-----cCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc
Confidence 35788889999999999999985 35677899999986643322333479999999999 999999999998877
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
.+++|||||+. +|.+.++. ....+++..+..|+.||++||+|+|.+|+.||||||+|||+
T Consensus 84 ~L~fVfE~Md~-NLYqLmK~-------------------R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi 143 (538)
T KOG0661|consen 84 ILYFVFEFMDC-NLYQLMKD-------------------RNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI 143 (538)
T ss_pred eEeeeHHhhhh-hHHHHHhh-------------------cCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe
Confidence 99999999965 99999972 34679999999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhc-cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
..+..+||+||||||.+.+..-+ +....|-.|.|||++. .+.|+.+.|+||+|||++||++. .+.|.|.+.-+-+
T Consensus 144 ~~~~~iKiaDFGLARev~SkpPY---TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sL-rPLFPG~sE~Dqi 219 (538)
T KOG0661|consen 144 SGNDVIKIADFGLAREVRSKPPY---TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSL-RPLFPGASEIDQI 219 (538)
T ss_pred cccceeEecccccccccccCCCc---chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHh-cccCCCCcHHHHH
Confidence 99999999999999988655433 4556678899999876 56789999999999999999983 4567777665544
Q ss_pred HHHHc---------------------CCccCC--------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 601 KYIKE---------------------GNILQA--------PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 601 ~~i~~---------------------~~~~~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+|.+ -.+++. ..+.+.+..+||.+|+..||.+|||+++.+++++
T Consensus 220 ~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pf 293 (538)
T KOG0661|consen 220 YKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPF 293 (538)
T ss_pred HHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence 44432 001111 1246789999999999999999999999999875
No 62
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.5e-40 Score=341.55 Aligned_cols=277 Identities=47% Similarity=0.859 Sum_probs=230.3
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
...++.+.+.||+|+||.||++.........++..+|+|.++.. .....+.+.+|++++++++|+||+++++++..+..
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC-CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 45678889999999999999998654444556788999998754 34456689999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.+++|||+++|+|.++++...+..... ..........+++..++.++.|++.||+|||+++++||||||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~ 156 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKIL-----AGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG 156 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhh-----cccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc
Confidence 999999999999999998554321100 000011224589999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++++.+||......+....
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIEC 236 (280)
T ss_pred CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHH
Confidence 99999999999997654333222233344577899999999999999999999999999999978889988888888888
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+..+.....+..++..+.+++.+||+.+|.+||++.+|.+.|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 237 ITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 8777666677789999999999999999999999999998775
No 63
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=6.1e-40 Score=339.28 Aligned_cols=278 Identities=39% Similarity=0.706 Sum_probs=233.1
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec-
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV- 439 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~- 439 (653)
.+..++|++.+.||+|+||.||+|..... .......|++|+++........+.+.+|+.++++++|+||+++++++..
T Consensus 2 ~~~~~~~~~~~~i~~g~~g~V~~~~~~~~-~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 2 AISRDRVTLSDLLQEGTFGRIFYGILIDE-KPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred ccchhheEEeeeecccCCceEEEEEEecC-CCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 35677899999999999999999987431 1123578999999876666667789999999999999999999998765
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
+...++++||+++|+|.+++....... ......+++..++.++.|++.||+|||+.+++|+||||+||
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~------------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~ni 148 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGE------------ANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNC 148 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccc------------cccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhE
Confidence 577899999999999999997432110 01235689999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
|+++++.+||+|||+++.+...+.........++..|+|||.+.+..++.++||||||+++||+++.+.+||...+..++
T Consensus 149 l~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 228 (280)
T cd05043 149 VIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEM 228 (280)
T ss_pred EEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHH
Confidence 99999999999999998664433322223344567899999999999999999999999999999967779988888888
Q ss_pred HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q psy5539 600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL 651 (653)
Q Consensus 600 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l 651 (653)
...+..+.....+..+++++.+++.+||..+|++|||+.++++.|.++.+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~~ 280 (280)
T cd05043 229 AAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQL 280 (280)
T ss_pred HHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhcC
Confidence 8888877665566678999999999999999999999999999999988753
No 64
>KOG0593|consensus
Probab=100.00 E-value=1.1e-41 Score=334.20 Aligned_cols=251 Identities=23% Similarity=0.407 Sum_probs=204.9
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
.|+.+.++|+|+||.|||++. ..+|+.||||++.+... +...+-..|||++|+.|+|+|+|.|+.+|..+..++
T Consensus 3 kYE~LgkvGEGSYGvV~KCrn-----k~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklh 77 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRN-----KDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLH 77 (396)
T ss_pred HHhhhhccccCcceEEEEecc-----CCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeE
Confidence 456677899999999999985 46889999999987644 556667889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
|||||++..=|++ |. .....++.....+++.|++.|+.|+|++++|||||||+||||+.+
T Consensus 78 LVFE~~dhTvL~e-Le-------------------~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~ 137 (396)
T KOG0593|consen 78 LVFEYCDHTVLHE-LE-------------------RYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQN 137 (396)
T ss_pred EEeeecchHHHHH-HH-------------------hccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecC
Confidence 9999998854544 43 123457888999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
|.+||+|||.|+.+.... ..-+....|-.|.|||.+.+ .+|....||||+||++.||++ |.+.|.|.+.-+....|
T Consensus 138 gvvKLCDFGFAR~L~~pg--d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~-G~pL~PG~SDiDQLy~I 214 (396)
T KOG0593|consen 138 GVVKLCDFGFARTLSAPG--DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLT-GEPLWPGRSDIDQLYLI 214 (396)
T ss_pred CcEEeccchhhHhhcCCc--chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhc-CCcCCCCcchHHHHHHH
Confidence 999999999999875221 11234556788999999988 689999999999999999999 45677777665544444
Q ss_pred Hc--CCc------------------cCCC----------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 604 KE--GNI------------------LQAP----------DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 604 ~~--~~~------------------~~~~----------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
.. |.+ ++.+ ...+.-+.+|++.|++.||.+|++-++++.|.
T Consensus 215 ~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~ 285 (396)
T KOG0593|consen 215 RKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHP 285 (396)
T ss_pred HHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcCh
Confidence 32 111 1111 13446788999999999999999999999875
No 65
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=342.90 Aligned_cols=246 Identities=22% Similarity=0.318 Sum_probs=208.7
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEec----CCceE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAV----GKPMC 444 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~----~~~~~ 444 (653)
..||+|++|.||+|+.. ++.||||+++... .....+.|.+|+.+|++++|||||+++|++.. ....+
T Consensus 26 ~~i~~g~~~~v~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~ 98 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN-------NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLS 98 (283)
T ss_pred eEEeeCCceEEEEEEEC-------CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceE
Confidence 56899999999999863 4789999997542 23335678899999999999999999999866 35789
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCCEeEcC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLIND 523 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-~ivHrDLkp~NILl~~ 523 (653)
+||||+++|+|.++++. ...+++...+.++.|++.||.|||+. +++||||||+|||+++
T Consensus 99 lv~Ey~~~g~L~~~l~~--------------------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~ 158 (283)
T PHA02988 99 LILEYCTRGYLREVLDK--------------------EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE 158 (283)
T ss_pred EEEEeCCCCcHHHHHhh--------------------CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC
Confidence 99999999999999962 23578889999999999999999984 8999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhcc--CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++.+||+|||+++..... .....++..|+|||.+.+ ..++.++||||||+++|||++| ..||.+.+..++..
T Consensus 159 ~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g-~~Pf~~~~~~~~~~ 232 (283)
T PHA02988 159 NYKLKIICHGLEKILSSP-----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTG-KIPFENLTTKEIYD 232 (283)
T ss_pred CCcEEEcccchHhhhccc-----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHC-CCCCCCCCHHHHHH
Confidence 999999999998764321 123456788999999876 6899999999999999999994 56999888888877
Q ss_pred HHHcC-CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 602 YIKEG-NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 602 ~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
.+..+ .....+..++..+.+++.+||+.||++|||+++|++.|..++.
T Consensus 233 ~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 233 LIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 77543 3344555789999999999999999999999999999988764
No 66
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.1e-40 Score=338.46 Aligned_cols=265 Identities=39% Similarity=0.735 Sum_probs=223.3
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc---
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP--- 442 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~--- 442 (653)
|.+.+.||+|+||.||+|+... +......||+|+++... .......+.+|++.++.++|+||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQ--DDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEec--CCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence 3567889999999999998642 22345789999987542 33445678999999999999999999998865544
Q ss_pred ---eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 443 ---MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 443 ---~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
.++++||+++|+|.+++..... ......+++..++.++.|++.||.|||+++++||||||+||
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~--------------~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Ni 144 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRL--------------GGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNC 144 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhc--------------cCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheE
Confidence 7999999999999999863221 01224588999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
++++++.+||+|||+++................+..|+|||.+....++.++||||||+++|||++++..||.+....++
T Consensus 145 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~ 224 (273)
T cd05035 145 MLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI 224 (273)
T ss_pred EECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999998765444333333344567899999998889999999999999999999988889999888899
Q ss_pred HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 600 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
.+.+..+.....+..++.++.+++.+||+.+|++||++.++++.|.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 225 YDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 998888877777888999999999999999999999999999999865
No 67
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.8e-40 Score=335.22 Aligned_cols=251 Identities=40% Similarity=0.764 Sum_probs=214.7
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
+.||+|+||.||+|+.. .+++.||+|.++..........+.+|++++++++||||+++++++......++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLR-----ADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEe-----cCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeec
Confidence 35899999999999863 3568899999876655666678999999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++++|.++++. ....+++..++.++.|++.||+|||+++++|+||||+|||+++++.+||+
T Consensus 76 ~~~~L~~~~~~-------------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~ 136 (252)
T cd05084 76 QGGDFLTFLRT-------------------EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKIS 136 (252)
T ss_pred cCCcHHHHHHh-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEEC
Confidence 99999999862 12357899999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccC
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQ 610 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~ 610 (653)
|||++.................+..|+|||.+.++.++.++||||||+++|||++++..||.....++....+..+....
T Consensus 137 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (252)
T cd05084 137 DFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLP 216 (252)
T ss_pred ccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC
Confidence 99998754322111111222345679999999999999999999999999999997888998888877777777665566
Q ss_pred CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 611 APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 611 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+..++..+.+++.+||+.+|++|||+.++++.|.
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 217 CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 77788999999999999999999999999988764
No 68
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.4e-40 Score=337.36 Aligned_cols=259 Identities=36% Similarity=0.683 Sum_probs=221.7
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++..++|++.+.||+|+||.||+|... ++..||+|.++.... ..+.+.+|+.++++++|+||+++++.+...
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYN------NSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVVTKE 73 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEec------CCceEEEEEccCCch--hHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 456778999999999999999999863 235799999875332 245789999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..+++|||+++|+|.++++.. ....+++..++.++.|++.||+|||+.+++|+||||+||+
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~------------------~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil 135 (261)
T cd05072 74 EPIYIITEYMAKGSLLDFLKSD------------------EGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVL 135 (261)
T ss_pred CCcEEEEecCCCCcHHHHHHHh------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEE
Confidence 9999999999999999999632 1245788899999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.++|+|||+++....... .......++..|+|||.+....++.++||||||+++|||++++..||.+....+..
T Consensus 136 i~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~ 214 (261)
T cd05072 136 VSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVM 214 (261)
T ss_pred ecCCCcEEECCCccceecCCCce-eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHH
Confidence 99999999999999976532211 12223345678999999999999999999999999999999777899888888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
..+..+...+.+..++.++.+++.+||+.+|++||+++++.+.|++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 215 SALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 8887776555666789999999999999999999999999998875
No 69
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7e-40 Score=348.31 Aligned_cols=287 Identities=39% Similarity=0.709 Sum_probs=236.5
Q ss_pred ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCC--ccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEe
Q psy5539 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKH--EEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLG 435 (653)
Q Consensus 359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~--~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g 435 (653)
++++...+|.+.+.||+|+||.||+|+..+.... .....||+|.++........+++.+|+++++++ +||||+++++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 3466667899999999999999999986442221 233579999998665555567899999999999 8999999999
Q ss_pred EEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539 436 VCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515 (653)
Q Consensus 436 ~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk 515 (653)
++..++..++++||+++|+|.+++....+....... .........+++.+++.++.|++.||.|||+++++|||||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlk 161 (334)
T cd05100 86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSF----DTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLA 161 (334)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCccccccc----ccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 999999999999999999999999865432211000 0001123468899999999999999999999999999999
Q ss_pred CCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
|+|||+++++.+||+|||+++...............++..|||||.+.+..++.++||||||+++|||++++..||.+.+
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 241 (334)
T cd05100 162 ARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 241 (334)
T ss_pred cceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999765433322223334446789999999999999999999999999999997778999999
Q ss_pred HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 596 ~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
.++....+..+.....+...+.++.+++.+||+.+|.+||++.+|++.|..+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 242 VEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 999988888877666777889999999999999999999999999999988764
No 70
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.4e-40 Score=336.08 Aligned_cols=259 Identities=37% Similarity=0.696 Sum_probs=221.9
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++++++|++.+.||+|+||.||+|... .++.||+|.++.... ..+++.+|+.++++++|+||+++++++...
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~------~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (261)
T cd05068 2 EIDRTSIQLLRKLGAGQFGEVWEGLWN------NTTPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAVCTLE 73 (261)
T ss_pred ccchhheeeEEEecccCCccEEEEEec------CCeEEEEEeeCCCcc--cHHHHHHHHHHHHHCCCCCccceeEEEecC
Confidence 567788999999999999999999853 236799999875432 245688999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..++||||+++++|.+++... ....+++..+..++.|++.||.|||+.+++|+||||+||+
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil 135 (261)
T cd05068 74 EPIYIVTELMKYGSLLEYLQGG------------------AGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVL 135 (261)
T ss_pred CCeeeeeecccCCcHHHHHhcc------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEE
Confidence 9999999999999999998621 1245789999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.+||+|||+++...... .........+..|+|||.+.+..++.++||||||+++|||++++..||.+.+..++.
T Consensus 136 ~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~ 214 (261)
T cd05068 136 VGENNICKVADFGLARVIKEDI-YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVL 214 (261)
T ss_pred EcCCCCEEECCcceEEEccCCc-ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 9999999999999998654221 112222333568999999999999999999999999999999777899988888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
..+........+...+..+.+++.+||+.+|.+||++.+|.+.|++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 215 QQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 8877665555667789999999999999999999999999998875
No 71
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.9e-40 Score=337.52 Aligned_cols=263 Identities=40% Similarity=0.738 Sum_probs=218.2
Q ss_pred eEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC------
Q psy5539 368 IYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG------ 440 (653)
Q Consensus 368 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~------ 440 (653)
.+.+.||+|+||.||+|+... ......||+|.++.. ......+.+.+|+++++.++|+||+++++++...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~---~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQ---DDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred ccccccCcccCceEEEeEEcc---CCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCC
Confidence 356789999999999998743 122347999988754 2344456789999999999999999999987432
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...+++|||+++|+|.+++.... .......+++..+..++.|++.||+|||+++|+||||||+|||
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil 144 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSR--------------LGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCM 144 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhc--------------ccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheE
Confidence 25689999999999999885211 0112345899999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.+||+|||+++.+..............+..|++||.+....++.++||||||+++|||++++..||.+....+..
T Consensus 145 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~ 224 (272)
T cd05075 145 LNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIY 224 (272)
T ss_pred EcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999987643333222233456778999999999999999999999999999999778899988888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+.+..+.....+..++..+.+++.+||+.+|++|||+.+|++.|..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 225 DYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 88888877667778899999999999999999999999999998764
No 72
>KOG0597|consensus
Probab=100.00 E-value=1.5e-41 Score=355.99 Aligned_cols=251 Identities=23% Similarity=0.430 Sum_probs=223.0
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
++|.+.+.||+|+||+||||+- +.+.+.||+|.+.+. ..+...+.+.+|++|+++++|||||.++++|+...++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrr-----K~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRR-----KYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeeccc-----ccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceE
Confidence 4677888999999999999984 457789999998643 3445567799999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++|.||+.+ +|..+|. ....+++..+..|+.++++||.|||+.+|+|||+||+|||++.
T Consensus 77 ~vVte~a~g-~L~~il~--------------------~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~ 135 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILE--------------------QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEK 135 (808)
T ss_pred EEEehhhhh-hHHHHHH--------------------hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecC
Confidence 999999977 9999996 3467999999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
+|.+|++|||+|+.+..+.. .-....||+.|||||...+..|+..+|.||+||++||+++ |.+||+..+..++++.|
T Consensus 136 ~~~~KlcdFg~Ar~m~~~t~--vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~-G~PPF~a~si~~Lv~~I 212 (808)
T KOG0597|consen 136 GGTLKLCDFGLARAMSTNTS--VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYV-GQPPFYARSITQLVKSI 212 (808)
T ss_pred CCceeechhhhhhhcccCce--eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhc-CCCCchHHHHHHHHHHH
Confidence 99999999999998754332 2345678999999999999999999999999999999999 66799998888999988
Q ss_pred HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..... ..|...+..+.+++...+.+||.+|.|-.+++.|.+
T Consensus 213 ~~d~v-~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF 253 (808)
T KOG0597|consen 213 LKDPV-KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPF 253 (808)
T ss_pred hcCCC-CCcccccHHHHHHHHHHhhcChhhcccHHHHhcChH
Confidence 77553 456688899999999999999999999999998875
No 73
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9.8e-41 Score=347.97 Aligned_cols=250 Identities=22% Similarity=0.341 Sum_probs=216.0
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++.+.||+|+||.||+|+.. .+++.||+|.++... .....+.+.+|+.++++++||||+++++++..+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDR-----ISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEc-----CCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCe
Confidence 36888999999999999999864 356789999986432 22334568899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.++++. ...+++..+..++.||+.||+|||+++|+||||||+|||++
T Consensus 76 ~~lv~e~~~~~~L~~~~~~--------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~ 135 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRN--------------------SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD 135 (291)
T ss_pred EEEEEeCCCCCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC
Confidence 9999999999999999862 23578889999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||+++.... ......+++.|+|||.+.+..++.++||||||+++|||++|. .||.+.+..++.+.
T Consensus 136 ~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~-~pf~~~~~~~~~~~ 209 (291)
T cd05612 136 KEGHIKLTDFGFAKKLRD-----RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGY-PPFFDDNPFGIYEK 209 (291)
T ss_pred CCCCEEEEecCcchhccC-----CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCHHHHHHH
Confidence 999999999999976522 112345788999999999999999999999999999999954 58988888888888
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS-----FRTIYQTLWN 646 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~L~~ 646 (653)
+..+. ...+...+..+.+|+++||+.||.+||+ ++++++|.|-
T Consensus 210 i~~~~-~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~ 257 (291)
T cd05612 210 ILAGK-LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWF 257 (291)
T ss_pred HHhCC-cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccc
Confidence 87765 3566678899999999999999999995 9999999864
No 74
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=7.3e-40 Score=341.90 Aligned_cols=276 Identities=46% Similarity=0.827 Sum_probs=222.6
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCC-----------CCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCc
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGL-----------LKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~-----------~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~Hpn 429 (653)
+++.++|++.+.||+|+||.||+++..+. ........||+|+++.........++.+|+.+++.++|+|
T Consensus 1 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (296)
T cd05095 1 EFPRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPN 80 (296)
T ss_pred CCChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC
Confidence 35677899999999999999999865321 1223456799999987666666778999999999999999
Q ss_pred cceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q psy5539 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKF 509 (653)
Q Consensus 430 Iv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~i 509 (653)
|+++++++..++..++||||+++|+|.+++......... .......+++..++.++.|++.||+|||+.++
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 151 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAA---------EKADVVTISYSTLIFMATQIASGMKYLSSLNF 151 (296)
T ss_pred cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCccccc---------ccccccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 999999999999999999999999999999854322110 01223458899999999999999999999999
Q ss_pred eecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhC-CC
Q psy5539 510 VHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF-AL 588 (653)
Q Consensus 510 vHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~-~~ 588 (653)
+|+||||+|||+++++.++|+|||+++.+.............++..|++||....+.++.++||||||+++|||+++ +.
T Consensus 152 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~ 231 (296)
T cd05095 152 VHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKE 231 (296)
T ss_pred ecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999866443322222333456789999999889999999999999999999984 56
Q ss_pred CCCCCCCHHHHHHHHHc-------CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 589 QPYYGLTHEEVVKYIKE-------GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 589 ~p~~~~~~~e~~~~i~~-------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.||...+..+.+..... ....+.+..++..+.+++.+||+.+|.+||++.+|++.|.
T Consensus 232 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 232 QPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 78877776665543321 1122345568899999999999999999999999998875
No 75
>KOG0616|consensus
Probab=100.00 E-value=5.7e-41 Score=328.63 Aligned_cols=252 Identities=24% Similarity=0.399 Sum_probs=222.7
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH--HHHHHHHHHHHHHhhCCCCccceEEeEEec
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE--YLQTDFEREACLLAEFDHPNIVKLLGVCAV 439 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~--~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~ 439 (653)
...++|++++.||.|+||+|.+++.+ .++..+|+|+++...-. .+.+-..+|..+|+.+.||+++++++.+.+
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k-----~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d 115 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREK-----HSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD 115 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEc-----cCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc
Confidence 44568999999999999999999964 45789999999865332 233456789999999999999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
.+.++|||||++||.|..+|+. .+.+++..+..+|.||+.||+|||+.+|++|||||+||
T Consensus 116 ~~~lymvmeyv~GGElFS~Lrk--------------------~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENi 175 (355)
T KOG0616|consen 116 NSNLYMVMEYVPGGELFSYLRK--------------------SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENL 175 (355)
T ss_pred CCeEEEEEeccCCccHHHHHHh--------------------cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHe
Confidence 9999999999999999999983 35688999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
|||.+|.+||+|||.|+..... .-...||+.|+|||.+....++.++|.|||||++|||+. |.+||+..+...+
T Consensus 176 LlD~~G~iKitDFGFAK~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMla-G~pPF~~~~~~~i 249 (355)
T KOG0616|consen 176 LLDQNGHIKITDFGFAKRVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLA-GYPPFYDDNPIQI 249 (355)
T ss_pred eeccCCcEEEEeccceEEecCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHc-CCCCCcCCChHHH
Confidence 9999999999999999876322 234578999999999999999999999999999999998 6679999999999
Q ss_pred HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCC-----CCHHHHHHHHH
Q psy5539 600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNR-----PSFRTIYQTLW 645 (653)
Q Consensus 600 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-----Ps~~eil~~L~ 645 (653)
.+.|.++++ .+|...+.++++|++..++.|-.+| ....+|..|.|
T Consensus 250 Y~KI~~~~v-~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~w 299 (355)
T KOG0616|consen 250 YEKILEGKV-KFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPW 299 (355)
T ss_pred HHHHHhCcc-cCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcc
Confidence 999999985 6889999999999999999999999 35557777665
No 76
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.2e-39 Score=334.62 Aligned_cols=265 Identities=38% Similarity=0.666 Sum_probs=224.7
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+..++|...+.||+|+||.||+|+... .......+|+|.++........+.+..|++++++++|+||+++++++...+
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKM--PGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK 79 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEec--CCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC
Confidence 445678899999999999999998743 223346899999986655555678999999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+++++|.+++.. ....+++.++..++.|++.||+|||+.+++|+||||+||++
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~-------------------~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili 140 (268)
T cd05063 80 PAMIITEYMENGALDKYLRD-------------------HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV 140 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE
Confidence 99999999999999999862 12457899999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCcccccccccccc-CCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYK-GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
++++.+||+|||++.......... .......+..|+|||.+....++.++||||||+++|||++.+..||...+..++.
T Consensus 141 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~ 220 (268)
T cd05063 141 NSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVM 220 (268)
T ss_pred cCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH
Confidence 999999999999987653222111 1112233567999999998999999999999999999998677799888888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
..+..+...+.+..++.++.+++.+||+.+|++||++.+|++.|.++
T Consensus 221 ~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 221 KAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 88887766666677899999999999999999999999999998765
No 77
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1e-39 Score=333.87 Aligned_cols=253 Identities=35% Similarity=0.696 Sum_probs=216.5
Q ss_pred eecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeecC
Q psy5539 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMG 451 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~~ 451 (653)
.||+|+||.||+|.+.. ...+..||+|+++........+.+.+|+.++++++|+||+++++++. ....++||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~---~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKM---RKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEec---CCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCC
Confidence 38999999999998642 22346799999987666666678999999999999999999999875 457899999999
Q ss_pred CCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEec
Q psy5539 452 RGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531 (653)
Q Consensus 452 ~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~D 531 (653)
+|+|.+++.. ....+++..+++++.|++.||.|||+++++||||||+|||++.++.+||+|
T Consensus 78 ~~~L~~~l~~-------------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~d 138 (257)
T cd05115 78 GGPLNKFLSG-------------------KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISD 138 (257)
T ss_pred CCCHHHHHHh-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEecc
Confidence 9999999862 124588999999999999999999999999999999999999999999999
Q ss_pred cCcccccccccc-ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccC
Q psy5539 532 FGLSRKMYLQDY-YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQ 610 (653)
Q Consensus 532 fGla~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~ 610 (653)
||+++....... ........++..|+|||.+....++.++||||||+++||+++.+..||.+....++...+..+....
T Consensus 139 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 218 (257)
T cd05115 139 FGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLD 218 (257)
T ss_pred CCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC
Confidence 999975433221 1122223346789999999988999999999999999999986778999999888888888888777
Q ss_pred CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 611 APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 611 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
.+..+++++.+++.+||..+|++||++.+|.+.|..+
T Consensus 219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 7888999999999999999999999999999988764
No 78
>KOG0588|consensus
Probab=100.00 E-value=5.6e-41 Score=358.40 Aligned_cols=252 Identities=26% Similarity=0.376 Sum_probs=226.1
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
-+++.+.||.|+-|.|-+|+. ..+|+.+|||.+... ..+.....+++||.+|+.+.||||+++|++++.+.++
T Consensus 13 pwkLgkTLG~Gstg~vrlakh-----~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~l 87 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKH-----AETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHL 87 (786)
T ss_pred ceeccccccCCCCceehhhhc-----ccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceE
Confidence 467788899999999999985 468899999998654 3344456789999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
|||.||+++|.|.+||. ..+++++.++.++++||+.|+.|+|..+|+||||||+|+|||.
T Consensus 88 ylvlEyv~gGELFdylv--------------------~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~ 147 (786)
T KOG0588|consen 88 YLVLEYVPGGELFDYLV--------------------RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDV 147 (786)
T ss_pred EEEEEecCCchhHHHHH--------------------hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhc
Confidence 99999999999999997 3467899999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCC-CchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT-VESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t-~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
.+++||+|||+|....... --+...|++.|++||.+.+..|. .++||||-||||+.|++|.+ ||.+.+...++.+
T Consensus 148 ~~nIKIADFGMAsLe~~gk---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~L-PFdDdNir~LLlK 223 (786)
T KOG0588|consen 148 KNNIKIADFGMASLEVPGK---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKL-PFDDDNIRVLLLK 223 (786)
T ss_pred ccCEeeeccceeecccCCc---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCC-CCCCccHHHHHHH
Confidence 9999999999997643322 23456789999999999999985 89999999999999999766 9999999999999
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
++.|.+ +.|.+++.+.++|+++|+..||++|.|+++|++|+|-.
T Consensus 224 V~~G~f-~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~ 267 (786)
T KOG0588|consen 224 VQRGVF-EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLS 267 (786)
T ss_pred HHcCcc-cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhh
Confidence 999975 68899999999999999999999999999999999865
No 79
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=352.03 Aligned_cols=251 Identities=23% Similarity=0.317 Sum_probs=217.6
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
..++|.+.+.||+|+||.||+|+.. .+++.||+|.++... .....+.+.+|+.++++++||||+++++++..+
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 90 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHK-----GTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE 90 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC
Confidence 3468999999999999999999864 356789999987542 223345688999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIl 150 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLRK--------------------AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLL 150 (329)
T ss_pred CEEEEEEcCCCCChHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEE
Confidence 999999999999999999862 235788889999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.+||+|||+++..... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||.+.+..+..
T Consensus 151 l~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~ 224 (329)
T PTZ00263 151 LDNKGHVKVTDFGFAKKVPDR-----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIA-GYPPFFDDTPFRIY 224 (329)
T ss_pred ECCCCCEEEeeccCceEcCCC-----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHc-CCCCCCCCCHHHHH
Confidence 999999999999999765221 123457889999999999999999999999999999999 45689888888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS-----FRTIYQTLW 645 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~L~ 645 (653)
+.+..+. ...+..++..+.+|+++||+.||.+||+ ++++++|.|
T Consensus 225 ~~i~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~ 273 (329)
T PTZ00263 225 EKILAGR-LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPY 273 (329)
T ss_pred HHHhcCC-cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCc
Confidence 8888775 4567778999999999999999999996 799998875
No 80
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1e-39 Score=342.25 Aligned_cols=271 Identities=42% Similarity=0.771 Sum_probs=224.5
Q ss_pred ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEE
Q psy5539 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVC 437 (653)
Q Consensus 359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~ 437 (653)
...+..++|.+.+.||+|+||.||+|+..+.........||||+++........+.+.+|+.+++++ +|+||+++++++
T Consensus 29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 3466778899999999999999999986543344566789999998665555567899999999999 799999999999
Q ss_pred ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
...+..++||||+++|+|.++++... ...+++.+++.++.|++.||+|||+++++|+||||+
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~------------------~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~ 170 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKR------------------ESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 170 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCC------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccc
Confidence 99999999999999999999996221 123799999999999999999999999999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
|||+++++.++|+|||+++...............++..|+|||.+.+..++.++||||||+++|||++++..||.+....
T Consensus 171 Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~ 250 (302)
T cd05055 171 NVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD 250 (302)
T ss_pred eEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch
Confidence 99999999999999999976532221111222345678999999999999999999999999999999677788776654
Q ss_pred H-HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 598 E-VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 598 e-~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+ ....+..+.....+...+.++.+++.+||+.+|++|||+.++++.|..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 251 SKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 4 4444455544445566789999999999999999999999999988764
No 81
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.2e-39 Score=333.26 Aligned_cols=258 Identities=38% Similarity=0.740 Sum_probs=216.2
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEe-cCCceEEEEee
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCA-VGKPMCLLFEY 449 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~-~~~~~~LV~Ey 449 (653)
+.||+|+||.||+|.... .......||+|.+.........+.+.+|+.+++.++||||+++++++. .+...++|+||
T Consensus 1 ~~lg~g~~g~v~~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLID--SDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEec--CCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 358999999999998642 223457899999865444445667889999999999999999999875 45568999999
Q ss_pred cCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEE
Q psy5539 450 MGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529 (653)
Q Consensus 450 ~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI 529 (653)
+.+|+|.++++.. ...+++..++.++.||++||+|||+.+++||||||+|||+++++.+||
T Consensus 79 ~~~~~L~~~~~~~-------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl 139 (262)
T cd05058 79 MKHGDLRNFIRSE-------------------THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKV 139 (262)
T ss_pred CCCCCHHHHHHhc-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEE
Confidence 9999999999621 223567788999999999999999999999999999999999999999
Q ss_pred eccCcccccccccccc--CCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 530 ADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 530 ~DfGla~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
+|||+++.+....... ......++..|+|||.+....++.++||||||+++|||++++.+||...+..+....+..+.
T Consensus 140 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~ 219 (262)
T cd05058 140 ADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR 219 (262)
T ss_pred CCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 9999997654322111 11233456789999999989999999999999999999998888998888888888888777
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
....+..++..+.+++.+||+.+|++||++.+|++.+..+..
T Consensus 220 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 220 RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 666677788999999999999999999999999999987753
No 82
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.9e-40 Score=341.93 Aligned_cols=277 Identities=43% Similarity=0.803 Sum_probs=221.5
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCC---------CCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccc
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLL---------KHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV 431 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~---------~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv 431 (653)
|++.++|++.+.||+|+||.||+++..+.. .......||+|.++..........|.+|++++++++|+||+
T Consensus 1 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 1 EFPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred CCchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcC
Confidence 456778999999999999999999864321 11233569999998765666677899999999999999999
Q ss_pred eEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCcee
Q psy5539 432 KLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVH 511 (653)
Q Consensus 432 ~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivH 511 (653)
++++++...+..++||||+++++|.+++....... ..........+++..++.++.|++.||+|||+.+++|
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H 152 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIES--------TFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVH 152 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccc--------cccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeec
Confidence 99999999999999999999999999996432100 0011112345789999999999999999999999999
Q ss_pred cCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhC-CCCC
Q psy5539 512 RDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF-ALQP 590 (653)
Q Consensus 512 rDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~-~~~p 590 (653)
+||||+|||+++++.+||+|||+++...............++..|+|||.+..+.++.++||||||+++|||+++ +..|
T Consensus 153 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p 232 (295)
T cd05097 153 RDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQP 232 (295)
T ss_pred cccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999765433332223334457789999999999999999999999999999984 5568
Q ss_pred CCCCCHHHHHHHHHc-----C--CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 591 YYGLTHEEVVKYIKE-----G--NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 591 ~~~~~~~e~~~~i~~-----~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
|...+.++++..+.. + .....+...+..+.+|+.+||+.+|++||++++|++.|.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 233 YSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 887777666554422 1 112334567899999999999999999999999998875
No 83
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.9e-39 Score=339.11 Aligned_cols=276 Identities=38% Similarity=0.664 Sum_probs=224.9
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~~ 443 (653)
++|++.+.||+|+||.||+|.... ......+++|.++........+.+.+|++++.++ +||||+++++++......
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 78 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKK---DGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL 78 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecC---CCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence 578899999999999999998643 1122457889888655555566789999999999 799999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++|+||+++|+|.++++........... .........+++..++.++.|++.||+|||+++++||||||+|||+++
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~ 154 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAF----AKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGE 154 (297)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccc----ccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECC
Confidence 9999999999999999753321110000 001112346899999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.+||+|||++.... ..........+..|+|||.+....++.++||||||+++|||++.+..||.+....++...+
T Consensus 155 ~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~ 231 (297)
T cd05089 155 NLASKIADFGLSRGEE---VYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKL 231 (297)
T ss_pred CCeEEECCcCCCcccc---ceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999999986421 1111222334567999999999999999999999999999998667799999888888888
Q ss_pred HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
..+.....+..++..+.+|+.+||+.+|.+||++++|++.|..+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 232 PQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 77766666777899999999999999999999999999999887653
No 84
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.6e-39 Score=334.20 Aligned_cols=263 Identities=36% Similarity=0.657 Sum_probs=222.4
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.+++++.+.||+|+||.||+|+... .......||||.++....+....+|..|+.+++.++||||+++++++..+...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKL--PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEec--CCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 3568899999999999999998753 22234679999998765566677899999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++|+|.++++.. ...+++.+++.++.|++.||.|||+.+++|+||||+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-------------------~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~ 141 (269)
T cd05065 81 MIITEFMENGALDSFLRQN-------------------DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS 141 (269)
T ss_pred EEEEecCCCCcHHHHHhhC-------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC
Confidence 9999999999999998621 235789999999999999999999999999999999999999
Q ss_pred CCcEEEeccCcccccccccccc---CCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYK---GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
++.+||+|||++.......... .......+..|+|||.+.+..++.++||||||+++||+++.+..||.+.+..++.
T Consensus 142 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~ 221 (269)
T cd05065 142 NLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 221 (269)
T ss_pred CCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHH
Confidence 9999999999987543222111 1111223567999999999999999999999999999998677799888888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
..+......+.+..++..+.+++.+||+.+|.+||++.+|+..|..+
T Consensus 222 ~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 222 NAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 88876655556677899999999999999999999999999988764
No 85
>KOG2052|consensus
Probab=100.00 E-value=2.2e-40 Score=340.03 Aligned_cols=264 Identities=27% Similarity=0.429 Sum_probs=205.9
Q ss_pred CccccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhh--CCCCccc
Q psy5539 354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE--FDHPNIV 431 (653)
Q Consensus 354 ~~~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~--l~HpnIv 431 (653)
.|.|.+..++ .++.+.+.||+|.||.||+|+++| ..||||++...... .+.+|.++... |+|+||+
T Consensus 201 lplLVQRTia-rqI~L~e~IGkGRyGEVwrG~wrG-------e~VAVKiF~srdE~----SWfrEtEIYqTvmLRHENIL 268 (513)
T KOG2052|consen 201 LPLLVQRTIA-RQIVLQEIIGKGRFGEVWRGRWRG-------EDVAVKIFSSRDER----SWFRETEIYQTVMLRHENIL 268 (513)
T ss_pred chhHhHHhhh-heeEEEEEecCccccceeeccccC-------CceEEEEecccchh----hhhhHHHHHHHHHhccchhh
Confidence 3445554444 478999999999999999999876 67999999764433 34566666554 6999999
Q ss_pred eEEeEEecC----CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-
Q psy5539 432 KLLGVCAVG----KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD- 506 (653)
Q Consensus 432 ~l~g~~~~~----~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~- 506 (653)
.+++....+ ..++||.+|.++|+|+|||.. ..++....++++..+|.||+|||-
T Consensus 269 gFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r---------------------~tv~~~~ml~LalS~AsGLaHLH~e 327 (513)
T KOG2052|consen 269 GFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR---------------------NTVTTEGMLKLALSIASGLAHLHME 327 (513)
T ss_pred hhhhccccCCCceEEEEEeeecccCCcHHHHHhh---------------------ccCCHHHHHHHHHHHhhhHHHHHHH
Confidence 999886543 378999999999999999972 458999999999999999999994
Q ss_pred -------CCceecCCCCCCEeEcCCCcEEEeccCcccccccc--ccccCCCCCCCccccccchhhccCC------CCCch
Q psy5539 507 -------RKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQ--DYYKGDENDAIPVRWMPLESILYNK------YTVES 571 (653)
Q Consensus 507 -------~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~------~t~ks 571 (653)
..|.|||||+.||||..++.+.|+|+|||-..... ..........||.+|||||++...- .-..+
T Consensus 328 I~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~A 407 (513)
T KOG2052|consen 328 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRA 407 (513)
T ss_pred HhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHH
Confidence 36999999999999999999999999999765433 1223455678999999999986541 23679
Q ss_pred hHHHHHHHHHHHHh----CC-----CCCCCCC-----CHHHHHHHHHcCCccC-CCCC-----CcHHHHHHHHHhhccCC
Q psy5539 572 DVWAFGVCLWEIFS----FA-----LQPYYGL-----THEEVVKYIKEGNILQ-APDN-----TPDALYDLMKLCWNMKP 631 (653)
Q Consensus 572 DVwSlGvvl~ellt----~~-----~~p~~~~-----~~~e~~~~i~~~~~~~-~~~~-----~~~~l~~li~~cl~~dP 631 (653)
||||||+|+||+.. || .+||++. +.+++.+.+...+..+ .|.. ....+.++|+.||..+|
T Consensus 408 DIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np 487 (513)
T KOG2052|consen 408 DIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANP 487 (513)
T ss_pred HHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCc
Confidence 99999999999984 33 2577754 4456666555444332 2322 23567889999999999
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q psy5539 632 MNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 632 ~~RPs~~eil~~L~~l~~~ 650 (653)
..|.|+-.|.+.|.++.+.
T Consensus 488 ~aRltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 488 AARLTALRIKKTLAKLSNS 506 (513)
T ss_pred hhhhHHHHHHHHHHHHhcC
Confidence 9999999999999988753
No 86
>KOG0605|consensus
Probab=100.00 E-value=2e-40 Score=348.20 Aligned_cols=263 Identities=25% Similarity=0.363 Sum_probs=222.6
Q ss_pred ccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEE
Q psy5539 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLL 434 (653)
Q Consensus 357 l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~ 434 (653)
+....+..++|+.+..||+|+||.||+|+- ..+|..+|+|++++... ....+-++.|-.+|...+.|.||+|+
T Consensus 133 ~~R~r~~~~DFe~Lk~IgkGAfGeVrLarK-----k~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLy 207 (550)
T KOG0605|consen 133 LRRTRLSLDDFELLKVIGKGAFGEVRLARK-----KDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLY 207 (550)
T ss_pred hccccCCcccchhheeeccccceeEEEEEE-----ccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEE
Confidence 344467788999999999999999999984 46789999999986532 23345678899999999999999999
Q ss_pred eEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539 435 GVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514 (653)
Q Consensus 435 g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL 514 (653)
-.|.+.+.+||||||++|||+..+|. ..+.|++..+..++.+.+.|++.||+.|+|||||
T Consensus 208 YsFQD~~~LYLiMEylPGGD~mTLL~--------------------~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDI 267 (550)
T KOG0605|consen 208 YSFQDKEYLYLIMEYLPGGDMMTLLM--------------------RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDI 267 (550)
T ss_pred EEecCCCeeEEEEEecCCccHHHHHH--------------------hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccC
Confidence 99999999999999999999999996 3467899999999999999999999999999999
Q ss_pred CCCCEeEcCCCcEEEeccCcccccccc----------------------cccc----C-------------------CCC
Q psy5539 515 ATRNCLINDQMVVKIADFGLSRKMYLQ----------------------DYYK----G-------------------DEN 549 (653)
Q Consensus 515 kp~NILl~~~~~vkI~DfGla~~~~~~----------------------~~~~----~-------------------~~~ 549 (653)
||+|+|||..|++||+||||+.-+... +... . ...
T Consensus 268 KPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~S 347 (550)
T KOG0605|consen 268 KPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYS 347 (550)
T ss_pred ChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhc
Confidence 999999999999999999998533110 0000 0 011
Q ss_pred CCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-ccCCCC--CCcHHHHHHHHHh
Q psy5539 550 DAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN-ILQAPD--NTPDALYDLMKLC 626 (653)
Q Consensus 550 ~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~-~~~~~~--~~~~~l~~li~~c 626 (653)
..||+-|||||++.+..|+...|.||||||+|||+. |.+||.+.++.+....|.... .+..|+ .++++..+||.+|
T Consensus 348 tVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLv-GyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rl 426 (550)
T KOG0605|consen 348 TVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLV-GYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRL 426 (550)
T ss_pred ccCCccccchHHHhcCCCCccccHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHH
Confidence 357899999999999999999999999999999998 778999999999998887654 244443 4779999999999
Q ss_pred hccCCCCCC---CHHHHHHHHHH
Q psy5539 627 WNMKPMNRP---SFRTIYQTLWN 646 (653)
Q Consensus 627 l~~dP~~RP---s~~eil~~L~~ 646 (653)
+. ||++|. +++||.+|+|-
T Consensus 427 l~-d~~~RLG~~G~~EIK~HPfF 448 (550)
T KOG0605|consen 427 LC-DPENRLGSKGAEEIKKHPFF 448 (550)
T ss_pred hc-CHHHhcCcccHHHHhcCCcc
Confidence 99 999998 58899888753
No 87
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.6e-39 Score=331.95 Aligned_cols=251 Identities=37% Similarity=0.715 Sum_probs=214.3
Q ss_pred eecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
.||+|+||.||+|.+.. ..++..+|+|+++... .....+++.+|+.+++.++|+||+++++++. .+..++||||+
T Consensus 2 ~lg~G~~g~v~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~ 77 (257)
T cd05116 2 ELGSGNFGTVKKGMYKM---KKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELA 77 (257)
T ss_pred cCCCcCCcceEEeEEec---CCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecC
Confidence 58999999999997642 2356789999987543 3345678999999999999999999999875 45779999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++|+|.+++.. ...+++..++.++.|++.||+|||+++|+||||||+|||+++++.+||+
T Consensus 78 ~~~~L~~~l~~--------------------~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~ 137 (257)
T cd05116 78 ELGPLNKFLQK--------------------NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKIS 137 (257)
T ss_pred CCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEEC
Confidence 99999999862 2347889999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccc-cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcc
Q psy5539 531 DFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609 (653)
Q Consensus 531 DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~ 609 (653)
|||+++........ .......++..|+|||.+....++.++||||||+++|||++.+..||.+....++.+.+..+...
T Consensus 138 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~ 217 (257)
T cd05116 138 DFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM 217 (257)
T ss_pred CCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC
Confidence 99999765433221 11222334678999999988889999999999999999998677899888888899999888777
Q ss_pred CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 610 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+.+..++.++.++|.+||+.+|++||++++|.+.|.+
T Consensus 218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 7888899999999999999999999999999998875
No 88
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.8e-39 Score=333.52 Aligned_cols=263 Identities=39% Similarity=0.679 Sum_probs=222.8
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.++|++.+.||+|+||.||+|+... .......+|+|.++........+.+.+|+.++++++||||+++++++..++..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKL--PGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEec--CCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 4578899999999999999998632 22344689999998665555667899999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++|+|.+++.. ....+++.+++.++.|++.||.|||+.+++||||||+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~-------------------~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~ 141 (267)
T cd05066 81 MIVTEYMENGSLDAFLRK-------------------HDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS 141 (267)
T ss_pred EEEEEcCCCCCHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC
Confidence 999999999999999962 1235789999999999999999999999999999999999999
Q ss_pred CCcEEEeccCcccccccccccc-CCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYK-GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
++.++|+|||++.......... .......+..|+|||.+.+..++.++||||||+++||+++.+..||.+....+....
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~ 221 (267)
T cd05066 142 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKA 221 (267)
T ss_pred CCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHH
Confidence 9999999999997653222111 112223356899999999999999999999999999999867779988888888888
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+.++...+.+..++..+.+++.+||+.+|.+||++.++++.|..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 222 IEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 887765556667889999999999999999999999999988764
No 89
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.1e-39 Score=340.03 Aligned_cols=275 Identities=45% Similarity=0.803 Sum_probs=224.8
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCC-----------CCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCcc
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLL-----------KHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI 430 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~-----------~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnI 430 (653)
++.++|++.+.||+|+||.||+|+..... .......||+|.++........+.+.+|++++++++||||
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 2 FPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred CchhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCE
Confidence 45678899999999999999999875422 1224467999999876666667789999999999999999
Q ss_pred ceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCce
Q psy5539 431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFV 510 (653)
Q Consensus 431 v~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~iv 510 (653)
+++++++..++..++++||+++++|.+++......... .......+++..++.++.|++.||+|||+.+++
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~ 152 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSG---------LACNSKSLSFSTLLYMATQIASGMRYLESLNFV 152 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhccccccc---------ccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 99999999999999999999999999999744321100 012234689999999999999999999999999
Q ss_pred ecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhC-CCC
Q psy5539 511 HRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF-ALQ 589 (653)
Q Consensus 511 HrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~-~~~ 589 (653)
|+||||+||++++++.++|+|||+++.....+.........++..|||||.+....++.++||||||+++|||+++ +..
T Consensus 153 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 232 (296)
T cd05051 153 HRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQ 232 (296)
T ss_pred ccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCC
Confidence 9999999999999999999999999876544433333444567889999999988999999999999999999984 567
Q ss_pred CCCCCCHHHHHHHHHcC-------CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 590 PYYGLTHEEVVKYIKEG-------NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 590 p~~~~~~~e~~~~i~~~-------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
||...+..+++..+... .....+..++.++.+++.+||+.+|.+|||+.+|++.|.
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 233 PYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 88877777766655432 112334557789999999999999999999999988874
No 90
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2e-39 Score=340.12 Aligned_cols=278 Identities=40% Similarity=0.667 Sum_probs=225.3
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCC
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGK 441 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~ 441 (653)
..++|++.+.||+|+||.||+|++.. ......+++|.++..........+.+|++++.++ +|+||+++++++..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~---~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEcc---CCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 45688999999999999999998642 1222457888887655555667889999999999 8999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+++|+|.++++.......... ..........+++.+++.++.|++.||+|||+++++||||||+|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili 157 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPA----FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 157 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhccccccccc----ccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe
Confidence 99999999999999999975432111000 00001123468999999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++++.+||+|||+++... ..........+..|+|||.+.+..++.++||||||+++|||++.+..||.+.+..+..+
T Consensus 158 ~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 234 (303)
T cd05088 158 GENYVAKIADFGLSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 234 (303)
T ss_pred cCCCcEEeCccccCcccc---hhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHH
Confidence 999999999999986321 11112223446789999999888899999999999999999996667998888888888
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
.+..+.....+...+.++.+|+.+||+.+|++||+++++++.+..+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 235 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred HHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 8777655556667889999999999999999999999999998876543
No 91
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.9e-40 Score=351.23 Aligned_cols=254 Identities=24% Similarity=0.343 Sum_probs=218.0
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEe
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCA 438 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~ 438 (653)
.+..++|.+.+.||+|+||.||+|+..+ .....||+|.+.... .....+.+.+|+.+++.++||||+++++++.
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~ 101 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKN----EDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK 101 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEEC----CCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE
Confidence 3455689999999999999999998632 234689999986432 2233456889999999999999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
.++..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+.+|+||||||+|
T Consensus 102 ~~~~~~lv~Ey~~~g~L~~~i~~--------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~N 161 (340)
T PTZ00426 102 DESYLYLVLEFVIGGEFFTFLRR--------------------NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPEN 161 (340)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHH
Confidence 99999999999999999999862 2357889999999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
||++.++.+||+|||+++.... ......+|+.|||||.+.+..++.++||||||+++|||++| ..||.+.+...
T Consensus 162 ILl~~~~~ikL~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G-~~Pf~~~~~~~ 235 (340)
T PTZ00426 162 LLLDKDGFIKMTDFGFAKVVDT-----RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVG-CPPFYANEPLL 235 (340)
T ss_pred EEECCCCCEEEecCCCCeecCC-----CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcC-CCCCCCCCHHH
Confidence 9999999999999999976421 12334678899999999999999999999999999999995 45998888888
Q ss_pred HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW 645 (653)
Q Consensus 599 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~ 645 (653)
+.+.+..+.. ..|...+..+.+++++|++.+|.+|+ +++++++|+|
T Consensus 236 ~~~~i~~~~~-~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~ 286 (340)
T PTZ00426 236 IYQKILEGII-YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW 286 (340)
T ss_pred HHHHHhcCCC-CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCC
Confidence 8888877653 46778899999999999999999995 8999999875
No 92
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.2e-39 Score=333.91 Aligned_cols=268 Identities=33% Similarity=0.631 Sum_probs=228.1
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+...+|++.+.||+|+||.||+|...... ......+|+|.++.........++.+|+.++++++|+||+++++++.. .
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~-~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 81 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEG-EKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-S 81 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCC-CCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence 45567899999999999999999864321 222457999998876655566789999999999999999999999887 7
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++|+||+++|+|.+++... ...+++..++.++.||+.||+|||+++++|+||||+|||+
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~-------------------~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~ 142 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNH-------------------KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV 142 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhc-------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE
Confidence 889999999999999998621 2348899999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++++.+||+|||+++................+..|+|||.+....++.++||||||+++||+++.+..||.+...+++.+
T Consensus 143 ~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 222 (279)
T cd05057 143 KTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPD 222 (279)
T ss_pred cCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 99999999999999865432221122223346789999999888999999999999999999996777999999899998
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
.+..+.....+..++..+.+++.+||..+|.+||++.++++.+.++.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 223 LLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 8888877777778889999999999999999999999999999887543
No 93
>KOG0578|consensus
Probab=100.00 E-value=9.2e-41 Score=353.39 Aligned_cols=254 Identities=24% Similarity=0.424 Sum_probs=218.0
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++..|....+||+|+-|.||.|+.. ..+..||||++..... ..++-+.+|+.+|+..+|+|||.++..+..++.
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~-----~~~~~VaiK~m~l~~Q-~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~de 344 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKI-----STKQEVAIKRMDLRKQ-PKKELLLNEILVMRDLHHPNIVNFLDSYLVGDE 344 (550)
T ss_pred hhhhhcchhhhccccccceeeeeec-----cCCceEEEEEEEeccC-CchhhhHHHHHHHHhccchHHHHHHHHhcccce
Confidence 3446777788999999999999854 3557799999864322 234457899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
+|.|||||++|+|.+.+. ...+++.++..|+++++.||+|||.++|+|||||.+|||++
T Consensus 345 LWVVMEym~ggsLTDvVt---------------------~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~ 403 (550)
T KOG0578|consen 345 LWVVMEYMEGGSLTDVVT---------------------KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT 403 (550)
T ss_pred eEEEEeecCCCchhhhhh---------------------cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec
Confidence 999999999999999875 23489999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
.+|.+||+|||++..+..... ......||+.|||||++....|..|.||||||++++||+. |.+||...++-..+..
T Consensus 404 ~~g~vKltDFGFcaqi~~~~~--KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMve-GEPPYlnE~PlrAlyL 480 (550)
T KOG0578|consen 404 MDGSVKLTDFGFCAQISEEQS--KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVE-GEPPYLNENPLRALYL 480 (550)
T ss_pred cCCcEEEeeeeeeeccccccC--ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhc-CCCCccCCChHHHHHH
Confidence 999999999999987643332 3345678999999999999999999999999999999998 5678887777666666
Q ss_pred HHcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 603 IKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 603 i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
|..... +..++.++..+++|+.+||..|+.+|+++.|+++|.+-
T Consensus 481 Ia~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl 526 (550)
T KOG0578|consen 481 IATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFL 526 (550)
T ss_pred HhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhh
Confidence 655443 45677899999999999999999999999999999864
No 94
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.1e-39 Score=344.27 Aligned_cols=257 Identities=21% Similarity=0.343 Sum_probs=213.1
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+..++|++.+.||+|+||.||+++.. .++..+|+|.++........+.+.+|++++++++||||+++++++..++
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 76 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHK-----PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 76 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEEC-----CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence 45678999999999999999999864 3567899999987655556678999999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCCEe
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCL 520 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-~ivHrDLkp~NIL 520 (653)
..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil 136 (331)
T cd06649 77 EISICMEHMDGGSLDQVLKE--------------------AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNIL 136 (331)
T ss_pred EEEEEeecCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEE
Confidence 99999999999999999862 23478889999999999999999986 6999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.+||+|||++...... ......++..|+|||.+.+..++.++||||||+++|||++|. .||...+..++.
T Consensus 137 ~~~~~~~kl~Dfg~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~-~p~~~~~~~~~~ 211 (331)
T cd06649 137 VNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGR-YPIPPPDAKELE 211 (331)
T ss_pred EcCCCcEEEccCccccccccc----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCC-CCCCCCCHHHHH
Confidence 999999999999998754221 123346788999999999999999999999999999999965 487665554443
Q ss_pred HHHH----------------------------------------------cCCccCCC-CCCcHHHHHHHHHhhccCCCC
Q psy5539 601 KYIK----------------------------------------------EGNILQAP-DNTPDALYDLMKLCWNMKPMN 633 (653)
Q Consensus 601 ~~i~----------------------------------------------~~~~~~~~-~~~~~~l~~li~~cl~~dP~~ 633 (653)
..+. .......+ ...+.++.+|+.+||..||++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~ 291 (331)
T cd06649 212 AIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAE 291 (331)
T ss_pred HHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCccc
Confidence 3221 11111111 236788999999999999999
Q ss_pred CCCHHHHHHHHHHHH
Q psy5539 634 RPSFRTIYQTLWNIK 648 (653)
Q Consensus 634 RPs~~eil~~L~~l~ 648 (653)
|||+++|++++|--.
T Consensus 292 Rpt~~ell~h~~~~~ 306 (331)
T cd06649 292 RADLKMLMNHTFIKR 306 (331)
T ss_pred CCCHHHHhcChHHhh
Confidence 999999999987543
No 95
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.7e-39 Score=331.84 Aligned_cols=253 Identities=36% Similarity=0.745 Sum_probs=216.8
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.++|.+.+.||+|+||.||+|+..+ ...+|+|.++.... ..+++.+|+.++++++||||+++++++......
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~------~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 74 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG------QYDVAIKMIKEGSM--SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPI 74 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC------CCcEEEEEcCCCcc--cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCc
Confidence 4578899999999999999998642 24599999875432 235689999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+.+|+|.+++... ...+++..++.++.||+.||+|||+.+++|+||||+|||+++
T Consensus 75 ~lv~e~~~~~~l~~~i~~~-------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~ 135 (256)
T cd05113 75 YIVTEYMSNGCLLNYLREH-------------------GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD 135 (256)
T ss_pred EEEEEcCCCCcHHHHHHhc-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC
Confidence 9999999999999998621 225789999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++.+..||......++...+
T Consensus 136 ~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~ 214 (256)
T cd05113 136 QGCVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKV 214 (256)
T ss_pred CCCEEECCCccceecCCCce-eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence 99999999999876533221 12223345678999999998899999999999999999999677799888888888888
Q ss_pred HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
..+.....+...+..+++++.+||+.+|.+||++.+|++.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 215 SQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 88776666677889999999999999999999999998876
No 96
>KOG0582|consensus
Probab=100.00 E-value=8.6e-40 Score=335.86 Aligned_cols=262 Identities=22% Similarity=0.382 Sum_probs=219.5
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
....++|++...||.|.-++||+|+... .+..||||++.-+......+.+++|+..|+.++||||++++..|..+
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p-----~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIP-----TNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecc-----cCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 4456689999999999999999999743 33789999998665544567899999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
..+|+||.||.+|++.+.++..-+ ..+++..+..|++++++||.|||.+|.||||||+.|||
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~------------------~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnIL 158 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYP------------------DGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNIL 158 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHcc------------------ccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEE
Confidence 999999999999999999984332 34899999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCcccccccccccc-CC-CCCCCccccccchhhcc--CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYK-GD-ENDAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~-~~-~~~~~t~~y~aPE~~~~--~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
|+++|.|||+|||.+..+....... .. ....+++.|||||++.. ..|+.|+||||||++..||.+ |..||..+.+
T Consensus 159 i~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~-G~aPf~k~pP 237 (516)
T KOG0582|consen 159 IDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAH-GHAPFSKYPP 237 (516)
T ss_pred EcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhc-CCCCcccCCh
Confidence 9999999999999987765433111 11 34578999999999654 369999999999999999998 5669999988
Q ss_pred HHHHHHHHcCCccCC-----C----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 597 EEVVKYIKEGNILQA-----P----DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 597 ~e~~~~i~~~~~~~~-----~----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
-+++-.-..+..+.. + ...+..++.++..|+.+||++|||+++++++.|-
T Consensus 238 mkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FF 296 (516)
T KOG0582|consen 238 MKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFF 296 (516)
T ss_pred HHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHH
Confidence 877666555544211 1 1245678999999999999999999999998763
No 97
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.2e-40 Score=349.45 Aligned_cols=246 Identities=23% Similarity=0.334 Sum_probs=210.1
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEe
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFE 448 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~E 448 (653)
+.||+|+||.||+|+.. .+++.||||+++... .......+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREK-----ATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEe
Confidence 35899999999999863 456889999997542 22334567889999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEE
Q psy5539 449 YMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVK 528 (653)
Q Consensus 449 y~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vk 528 (653)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+.+|+||||||+|||++.++.+|
T Consensus 76 ~~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~k 135 (323)
T cd05571 76 YANGGELFFHLSR--------------------ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIK 135 (323)
T ss_pred CCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEE
Confidence 9999999999862 24578999999999999999999999999999999999999999999
Q ss_pred EeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc
Q psy5539 529 IADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608 (653)
Q Consensus 529 I~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~ 608 (653)
|+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++|. .||.+.+...+...+..+.
T Consensus 136 l~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~-~Pf~~~~~~~~~~~~~~~~- 211 (323)
T cd05571 136 ITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-LPFYNQDHEKLFELILMEE- 211 (323)
T ss_pred EeeCCCCcccccCC--CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCC-CCCCCCCHHHHHHHHHcCC-
Confidence 99999987532111 1122345789999999999999999999999999999999954 5888888888877776654
Q ss_pred cCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539 609 LQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW 645 (653)
Q Consensus 609 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~ 645 (653)
...+...+.++.+++++||+.||++|| ++.++++|.|
T Consensus 212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~ 253 (323)
T cd05571 212 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRF 253 (323)
T ss_pred CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCC
Confidence 456778899999999999999999999 8999998865
No 98
>KOG0659|consensus
Probab=100.00 E-value=2.7e-40 Score=319.51 Aligned_cols=252 Identities=25% Similarity=0.373 Sum_probs=206.6
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|...+.||+|.||.||+|++ .++++.||||+++... .+.......|||+.|+.++|+||+.|++++-..+.+-
T Consensus 3 rY~~~~~lGEG~~gvVyka~d-----~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~ 77 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARD-----TETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLS 77 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEe-----cCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceE
Confidence 566678899999999999996 3578899999998553 2333456789999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
||+|||+. ||...++ .+.-.++..++..++.++++||+|||++.|+||||||.|+|++++
T Consensus 78 lVfEfm~t-dLe~vIk-------------------d~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~ 137 (318)
T KOG0659|consen 78 LVFEFMPT-DLEVVIK-------------------DKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSD 137 (318)
T ss_pred EEEEeccc-cHHHHhc-------------------ccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCC
Confidence 99999976 9999887 234568999999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
|.+||+|||+|+...+.+. .......|-.|.|||.+.+. .|+...|+||.|||+.||+- +.+-+.|.+.-+.+..|
T Consensus 138 g~lKiADFGLAr~f~~p~~--~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELll-r~P~fpG~sDidQL~~I 214 (318)
T KOG0659|consen 138 GQLKIADFGLARFFGSPNR--IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLL-RVPFFPGDSDIDQLSKI 214 (318)
T ss_pred CcEEeecccchhccCCCCc--ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHc-cCCCCCCCchHHHHHHH
Confidence 9999999999998754442 23334678899999999876 69999999999999999997 56666776654444333
Q ss_pred Hc----------------------CCccCC-----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 604 KE----------------------GNILQA-----PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 604 ~~----------------------~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
-. ...+.. -...+++..+|+..+|..||.+|+|++|.+++..
T Consensus 215 f~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~y 283 (318)
T KOG0659|consen 215 FRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPY 283 (318)
T ss_pred HHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchh
Confidence 21 000000 0124567899999999999999999999998764
No 99
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.6e-39 Score=331.70 Aligned_cols=267 Identities=37% Similarity=0.731 Sum_probs=227.0
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++..++|.+.+.||+|+||.||+|..... ......|+||...........+.+.+|+.++++++||||+++++++..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~--~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~- 78 (270)
T cd05056 2 EIQREDITLGRCIGEGQFGDVYQGVYMSP--ENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE- 78 (270)
T ss_pred eechhhceeeeeeCCccceeEEEEEEecC--CCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-
Confidence 45567789999999999999999986431 123457999998876555566789999999999999999999998875
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+++|+||||+|||
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~-------------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nil 139 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVN-------------------KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVL 139 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEE
Confidence 5678999999999999999621 234789999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
++.++.+||+|||+++........ ......++..|+|||.+....++.++||||||+++||+++.+..||.+.+..+..
T Consensus 140 i~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~ 218 (270)
T cd05056 140 VSSPDCVKLGDFGLSRYLEDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI 218 (270)
T ss_pred EecCCCeEEccCceeeecccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 999999999999998765433222 1223345668999999988899999999999999999998677899888888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
..+..+.....+..++..+.+++.+||..+|.+|||+.++++.|..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 219 GRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 88888877777888999999999999999999999999999999988754
No 100
>KOG0580|consensus
Probab=100.00 E-value=1e-40 Score=318.19 Aligned_cols=259 Identities=25% Similarity=0.432 Sum_probs=226.8
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEe
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCA 438 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~ 438 (653)
..+.++|++.+.||+|-||.||+|+.+ .+.-.||+|++....- .....++.+|+++.+.|+||||+++++++.
T Consensus 18 ~~~l~dfeigr~LgkgkFG~vYlarek-----ks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh 92 (281)
T KOG0580|consen 18 TWTLDDFEIGRPLGKGKFGNVYLAREK-----KSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH 92 (281)
T ss_pred ccchhhccccccccCCccccEeEeeec-----cCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhee
Confidence 456689999999999999999999853 4668999999865422 233457899999999999999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
+....||++||.++|+|...|+. .....+++.....++.|+|.||.|+|.++|+||||||+|
T Consensus 93 d~~riyLilEya~~gel~k~L~~------------------~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpen 154 (281)
T KOG0580|consen 93 DSKRIYLILEYAPRGELYKDLQE------------------GRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPEN 154 (281)
T ss_pred ccceeEEEEEecCCchHHHHHHh------------------cccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHH
Confidence 99999999999999999999972 233557888889999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
+|++..+.+||+|||.+..-. ........||..|.|||...+..++...|+|++|++.||++. |.+||...+..+
T Consensus 155 lLlg~~~~lkiAdfGwsV~~p----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflv-g~ppFes~~~~e 229 (281)
T KOG0580|consen 155 LLLGSAGELKIADFGWSVHAP----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLV-GLPPFESQSHSE 229 (281)
T ss_pred hccCCCCCeeccCCCceeecC----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHh-cCCchhhhhhHH
Confidence 999999999999999985421 122234568999999999999999999999999999999998 678999999999
Q ss_pred HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 599 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
..+.|..-. ...|..++.+..++|.+|+..+|.+|.+..+++.|+|-..
T Consensus 230 tYkrI~k~~-~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 230 TYKRIRKVD-LKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred HHHHHHHcc-ccCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 999998866 4677999999999999999999999999999999998543
No 101
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.1e-39 Score=333.32 Aligned_cols=259 Identities=36% Similarity=0.685 Sum_probs=223.7
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
|.+..+|.+.+.||+|+||.||+|...+ +..+++|.++.... .....+.+|+.+++.++|+||+++++++...
T Consensus 2 ~~~~~~y~~~~~ig~g~~~~vy~~~~~~------~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 74 (261)
T cd05148 2 ERPREEFTLERKLGSGYFGEVWEGLWKN------RVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVG 74 (261)
T ss_pred cCcHHHHHHhhhhccCCCccEEEeEecC------CCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecC
Confidence 3455678899999999999999998632 57899999876543 2345789999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..++||||+++|+|.++++.. ....+++..++.++.||+.||.|||+++++|+||||+|||
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nil 136 (261)
T cd05148 75 EPVYIITELMEKGSLLAFLRSP------------------EGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNIL 136 (261)
T ss_pred CCeEEEEeecccCCHHHHHhcC------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEE
Confidence 9999999999999999999621 2245789999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.+||+|||++....... .......++..|+|||.+....++.++||||||+++|+|++++..||.+.+..++.
T Consensus 137 v~~~~~~kl~d~g~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~ 214 (261)
T cd05148 137 VGEDLVCKVADFGLARLIKEDV--YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY 214 (261)
T ss_pred EcCCceEEEccccchhhcCCcc--ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence 9999999999999997653221 11224456778999999998999999999999999999999778899988888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
..+..+.....+..+++.+.+++.+||+.+|.+|||+.+|.+.|..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 215 DQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred HHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 8888776666778899999999999999999999999999998875
No 102
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.8e-39 Score=329.01 Aligned_cols=255 Identities=38% Similarity=0.715 Sum_probs=217.4
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
+.||+|+||.||+|.... .......+|+|.++........+++.+|+.+++.++|+||+++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~--~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLM--KSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeec--cCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 368999999999998643 222447899999987665555678999999999999999999999876 45689999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++|+|.+++.. ...+++..++.++.|++.||+|||+.+++|+||||+|||+++++.+||+
T Consensus 78 ~~~~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~ 137 (257)
T cd05060 78 PLGPLLKYLKK--------------------RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKIS 137 (257)
T ss_pred CCCcHHHHHHh--------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEec
Confidence 99999999962 2257899999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccc-cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcc
Q psy5539 531 DFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609 (653)
Q Consensus 531 DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~ 609 (653)
|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++++..||...+..++...+..+...
T Consensus 138 df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 217 (257)
T cd05060 138 DFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL 217 (257)
T ss_pred cccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC
Confidence 99999865433221 11222234568999999999999999999999999999998777799888888888888888777
Q ss_pred CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 610 QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 610 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
..+..++..+++++.+||..+|++||++.+|++.|..+.
T Consensus 218 ~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 778889999999999999999999999999999987653
No 103
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.5e-39 Score=337.98 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=207.2
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
|+..+.||+|+||.||+|... .+++.||+|.+..... ......+.+|+.++++++|+||+++++++...+..+
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~ 76 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALC 76 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEe-----cCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEE
Confidence 677899999999999999864 3568999999865322 223346789999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++|+|.+++... ....+++..+..++.|++.||+|||+++|+||||||+|||++++
T Consensus 77 lv~e~~~~g~L~~~~~~~------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~ 138 (285)
T cd05631 77 LVLTIMNGGDLKFHIYNM------------------GNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDR 138 (285)
T ss_pred EEEEecCCCcHHHHHHhh------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC
Confidence 999999999999888521 12357899999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH----HHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE----EVV 600 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~----e~~ 600 (653)
+.+||+|||++....... ......++..|||||.+.+..++.++||||||+++|||++| ..||.+.... ++.
T Consensus 139 ~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g-~~pf~~~~~~~~~~~~~ 214 (285)
T cd05631 139 GHIRISDLGLAVQIPEGE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQG-QSPFRKRKERVKREEVD 214 (285)
T ss_pred CCEEEeeCCCcEEcCCCC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhC-CCCCCCCCcchhHHHHH
Confidence 999999999997642221 12334678999999999999999999999999999999995 4588765432 233
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS-----FRTIYQTLW 645 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~L~ 645 (653)
..+... ....+...+.++.+|+++||+.+|.+||+ +++++++.|
T Consensus 215 ~~~~~~-~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~ 263 (285)
T cd05631 215 RRVKED-QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPI 263 (285)
T ss_pred HHhhcc-cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHh
Confidence 333332 23456678899999999999999999997 899999876
No 104
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.2e-39 Score=330.76 Aligned_cols=253 Identities=37% Similarity=0.735 Sum_probs=216.0
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
..+|.+.+.||+|+||.||+|+.. ....+|+|.++.... ...++.+|+++++.++|+||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~------~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR------GKIDVAIKMIREGAM--SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPI 74 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec------CCccEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCce
Confidence 346788899999999999999863 235699999865332 234688899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++++|.++++.. ...+++..++.++.|++.||+|||+.+++||||||+||++++
T Consensus 75 ~lv~e~~~~~~L~~~l~~~-------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~ 135 (256)
T cd05059 75 FIVTEYMANGCLLNYLRER-------------------KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE 135 (256)
T ss_pred EEEEecCCCCCHHHHHHhc-------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC
Confidence 9999999999999999621 235789999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.+||+|||+++...... .........+..|+|||.+.+..++.++||||||+++|||++++..||...+..+....+
T Consensus 136 ~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~ 214 (256)
T cd05059 136 DNVVKVSDFGLARYVLDDQ-YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESV 214 (256)
T ss_pred CCcEEECCcccceeccccc-ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHH
Confidence 9999999999997653221 111222334568999999999999999999999999999999778899888888888888
Q ss_pred HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
..+.....+...+.++.+++.+||..+|++|||+.++++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 215 SAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 87766666777899999999999999999999999999876
No 105
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.5e-39 Score=359.26 Aligned_cols=257 Identities=21% Similarity=0.294 Sum_probs=218.3
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
.|.+.+.||+|+||.||+|.... ..+..||+|.+.... ......+.+|+.+++.++|||||++++++..++..+|
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~----~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGS----DPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcC----CCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence 48899999999999999998532 224678888775433 3344568889999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
||||+++|+|.++|+... .....+++.++..++.||+.||+|||+++|+||||||+|||+++++
T Consensus 143 v~E~~~gg~L~~~l~~~~----------------~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~ 206 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRL----------------KEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG 206 (478)
T ss_pred EEECCCCCCHHHHHHHHH----------------hccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC
Confidence 999999999999986321 1234588999999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~ 605 (653)
.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++| ..||.+.+..+++..+..
T Consensus 207 ~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg-~~Pf~~~~~~~~~~~~~~ 285 (478)
T PTZ00267 207 IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTL-HRPFKGPSQREIMQQVLY 285 (478)
T ss_pred cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHh
Confidence 9999999999865332222223344588999999999999999999999999999999995 569988888888888888
Q ss_pred CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 606 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
+.....+..++.++.+++.+||+.+|++||++++++++.
T Consensus 286 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~ 324 (478)
T PTZ00267 286 GKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTE 324 (478)
T ss_pred CCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCH
Confidence 877667778899999999999999999999999998764
No 106
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.5e-39 Score=359.92 Aligned_cols=263 Identities=22% Similarity=0.297 Sum_probs=222.0
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEec
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV 439 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~ 439 (653)
+...++|.+.+.||+|+||+||+|+.. .+++.||||.++.. ..+.....+.+|+.++..++|+||+++...+..
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~-----~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~ 102 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRV-----SDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAK 102 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEc-----CCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceec
Confidence 445578999999999999999999853 35689999998643 334455678899999999999999999877654
Q ss_pred CC--------ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCcee
Q psy5539 440 GK--------PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVH 511 (653)
Q Consensus 440 ~~--------~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivH 511 (653)
.+ ..++||||+++|+|.++++... .....+++..+..++.|++.||+|||+++|+|
T Consensus 103 ~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~----------------~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiH 166 (496)
T PTZ00283 103 KDPRNPENVLMIALVLDYANAGDLRQEIKSRA----------------KTNRTFREHEAGLLFIQVLLAVHHVHSKHMIH 166 (496)
T ss_pred ccccCcccceEEEEEEeCCCCCcHHHHHHHhh----------------ccCCCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 32 3689999999999999997321 12346889999999999999999999999999
Q ss_pred cCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCC
Q psy5539 512 RDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPY 591 (653)
Q Consensus 512 rDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~ 591 (653)
|||||+|||+++++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||++|. .||
T Consensus 167 rDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~-~Pf 245 (496)
T PTZ00283 167 RDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK-RPF 245 (496)
T ss_pred CCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC-CCC
Confidence 9999999999999999999999997653322222223456789999999999999999999999999999999954 599
Q ss_pred CCCCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 592 YGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 592 ~~~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.+..+++..+..+.....+..+++++.+++.+||+.+|.+||++.+++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~ 299 (496)
T PTZ00283 246 DGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPI 299 (496)
T ss_pred CCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHH
Confidence 998988998888888777778889999999999999999999999999998754
No 107
>KOG0611|consensus
Probab=100.00 E-value=1.3e-40 Score=336.47 Aligned_cols=250 Identities=25% Similarity=0.424 Sum_probs=218.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH--HHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE--YLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~--~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
.+|++.+.||+|.||+|-+|.. ...++.||||.++...-+ +....+++||+||+.|+||||+.++.+|+..+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e-----~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYE-----HKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhh-----ccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCce
Confidence 4688889999999999999974 356789999999866433 333458899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
..|||||..+|+|.+|+. ..+.|++.++.++++||.+++.|+|.++++|||||.+|||+|
T Consensus 128 IvivMEYaS~GeLYDYiS--------------------er~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD 187 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYIS--------------------ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLD 187 (668)
T ss_pred EEEEEEecCCccHHHHHH--------------------HhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeec
Confidence 999999999999999996 346799999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCC-CchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT-VESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t-~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
+|+++||+||||+......... ....|++.|.+||.+.+..|. +..|-|||||+||-|..| ..||.|.+...++.
T Consensus 188 ~N~NiKIADFGLSNly~~~kfL---qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyG-tMPFDG~Dhk~lvr 263 (668)
T KOG0611|consen 188 QNNNIKIADFGLSNLYADKKFL---QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYG-TMPFDGRDHKRLVR 263 (668)
T ss_pred CCCCeeeeccchhhhhccccHH---HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhc-ccccCCchHHHHHH
Confidence 9999999999999654322221 345678899999999999885 899999999999999975 45999999999999
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.|..|...+ +..|.+..-||+.||-.+|++|.|+.+|..|.|
T Consensus 264 QIs~GaYrE--P~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 264 QISRGAYRE--PETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred HhhcccccC--CCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 999998643 345667888999999999999999999999976
No 108
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.2e-39 Score=327.07 Aligned_cols=261 Identities=48% Similarity=0.898 Sum_probs=225.4
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
+.||+|+||.||+|..... ...+..|++|.++........+.+.+|++++..++|+||+++++++..+...++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~--~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGK--DGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecC--CCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 3589999999999997531 13367899999987665555678999999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++++|.++++...+.. .......+++.++..++.|++.||+|||+++++|+||||+||++++++.+||+
T Consensus 79 ~~~~L~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~ 147 (262)
T cd00192 79 EGGDLLDYLRKSRPVF-----------PSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKIS 147 (262)
T ss_pred cCCcHHHHHhhccccc-----------cccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEc
Confidence 9999999997432110 00113568999999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccC
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQ 610 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~ 610 (653)
|||.+................++..|+|||.+....++.++||||||++++||+++|..||...+..++.+.+..+....
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 227 (262)
T cd00192 148 DFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLP 227 (262)
T ss_pred ccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 99999876544433334455678899999999988999999999999999999998888999999999999998887777
Q ss_pred CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 611 APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 611 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
.+..++.++.+++.+||+.+|.+|||+.+++++|
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 228 KPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred CCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 8888999999999999999999999999999886
No 109
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=7e-39 Score=328.52 Aligned_cols=259 Identities=36% Similarity=0.649 Sum_probs=218.3
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
+++.++|.+.+.||+|+||.||+|+..+ ...||+|.++.... ..+.+.+|++++++++|+||+++++++. .
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~------~~~valK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~ 72 (262)
T cd05071 2 EIPRESLRLEVKLGQGCFGEVWMGTWNG------TTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVS-E 72 (262)
T ss_pred CCChHHeeEeeecCCCCCCcEEEEEecC------CceEEEEecccCcc--CHHHHHHHHHHHHhCCCCCcceEEEEEC-C
Confidence 4566789999999999999999998632 24599999975332 2346899999999999999999999874 4
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...++||||+++|+|.+++... ....+++..++.++.|++.||+|||+.+++|+||||+||+
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nil 134 (262)
T cd05071 73 EPIYIVTEYMSKGSLLDFLKGE------------------MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL 134 (262)
T ss_pred CCcEEEEEcCCCCcHHHHHhhc------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEE
Confidence 5689999999999999999621 1234788999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.++|+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++++..||.+....++.
T Consensus 135 l~~~~~~~L~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~ 213 (262)
T cd05071 135 VGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 213 (262)
T ss_pred EcCCCcEEeccCCceeecccccc-ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHH
Confidence 99999999999999976532221 12223445678999999999999999999999999999999888899888888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+.+..+.....+..++..+.+++.+||+.+|++||++.++++.|++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 214 DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 88777655556677899999999999999999999999999988764
No 110
>KOG0201|consensus
Probab=100.00 E-value=3e-41 Score=346.62 Aligned_cols=252 Identities=24% Similarity=0.418 Sum_probs=222.0
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
.|...+.||+|+||.||+|.+ ..+.+.||+|++.-+..+...+++++|+.+++.++++||.+++|.+..+..+++
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d-----~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwi 88 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAID-----NKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWI 88 (467)
T ss_pred ccccchhccccccceeeeeee-----ccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHH
Confidence 455668899999999999985 457789999999988777788899999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
+|||+.+|++.+.|+. ...+.+..+.-|+++++.||.|||.++.+|||||+.|||+..+|
T Consensus 89 iMey~~gGsv~~lL~~--------------------~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g 148 (467)
T KOG0201|consen 89 IMEYCGGGSVLDLLKS--------------------GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG 148 (467)
T ss_pred HHHHhcCcchhhhhcc--------------------CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC
Confidence 9999999999999862 22346667778899999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~ 605 (653)
.|||+|||.+..+..... ......||+.|||||++....|+.|+||||||++.+||.+ |.+|+.+..+..++..|..
T Consensus 149 ~vkl~DfgVa~ql~~~~~--rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~-GePP~s~~hPmrvlflIpk 225 (467)
T KOG0201|consen 149 DVKLADFGVAGQLTNTVK--RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAK-GEPPHSKLHPMRVLFLIPK 225 (467)
T ss_pred cEEEEecceeeeeechhh--ccccccccccccchhhhccccccchhhhhhhhHHHHHHhc-CCCCCcccCcceEEEeccC
Confidence 999999999977644433 2356789999999999998899999999999999999998 6689999888777777766
Q ss_pred CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 606 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
...+.....+++.+++||..|++++|+.||++.++++|-+
T Consensus 226 ~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~F 265 (467)
T KOG0201|consen 226 SAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKF 265 (467)
T ss_pred CCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHH
Confidence 6655556688999999999999999999999999998754
No 111
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=6.4e-39 Score=336.17 Aligned_cols=268 Identities=34% Similarity=0.631 Sum_probs=223.2
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+..++|+..+.||+|+||.||+|+..... ......||+|.+..........++.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEG-ETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCC-CcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 34567888999999999999999864211 1123468999998765555566789999999999999999999998754
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++++||+++|+|.+++... ...+++..++.++.|++.||.|||+++|+|+||||+|||+
T Consensus 82 ~~~~v~e~~~~g~l~~~~~~~-------------------~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill 142 (303)
T cd05110 82 TIQLVTQLMPHGCLLDYVHEH-------------------KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV 142 (303)
T ss_pred CceeeehhcCCCCHHHHHHhc-------------------ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee
Confidence 467999999999999998621 2357888999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++.+..||.+....++.+
T Consensus 143 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~ 222 (303)
T cd05110 143 KSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD 222 (303)
T ss_pred cCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999999865432222222234456789999999999999999999999999999986667998888888888
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
.+..+.....+..++..+.+++..||..+|++||+++++++.+..+.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 223 LLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 8877776666677889999999999999999999999999999887644
No 112
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.6e-39 Score=345.41 Aligned_cols=250 Identities=26% Similarity=0.331 Sum_probs=212.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++.+.||+|+||.||+|+.. .++..||||+++.... ......+.+|++++..++||||+++++++..++.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKK-----DTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCE
Confidence 36889999999999999999864 3457899999975432 2234568899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.+|||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 76 ~~lv~e~~~g~~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~ 135 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNN--------------------LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID 135 (333)
T ss_pred EEEEEeCCCCCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC
Confidence 9999999999999999862 23578899999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||+++.... ......+++.|+|||.+.+..++.++||||||+++|||++| ..||.+.+..+....
T Consensus 136 ~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g-~~pf~~~~~~~~~~~ 209 (333)
T cd05600 136 ASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCG-FPPFSGSTPNETWEN 209 (333)
T ss_pred CCCCEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhC-CCCCCCCCHHHHHHH
Confidence 999999999999975422 22345678899999999999999999999999999999995 569988888887776
Q ss_pred HHcCCc-cCCCC------CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKEGNI-LQAPD------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~~~~-~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+..... ...+. .++.++.+++.+||..+|.+||++++++++.|
T Consensus 210 i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~ 259 (333)
T cd05600 210 LKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPF 259 (333)
T ss_pred HHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcc
Confidence 654321 12221 45889999999999999999999999999875
No 113
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.1e-39 Score=343.56 Aligned_cols=244 Identities=23% Similarity=0.339 Sum_probs=208.0
Q ss_pred ecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 373 LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
||+|+||.||+|+.. .++..||+|.++... .......+.+|+.++.+++||||+++++++...+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKR-----DTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCC
Confidence 699999999999864 356789999987532 2334456889999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++|+|.+++.. ...+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+
T Consensus 76 ~~g~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~ 135 (312)
T cd05585 76 NGGELFHHLQR--------------------EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALC 135 (312)
T ss_pred CCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEE
Confidence 99999999862 2357889999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccC
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQ 610 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~ 610 (653)
|||+++...... .......+|+.|+|||.+.+..++.++||||||+++|||++| ..||.+.+..++...+..+. ..
T Consensus 136 Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg-~~pf~~~~~~~~~~~~~~~~-~~ 211 (312)
T cd05585 136 DFGLCKLNMKDD--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTG-LPPFYDENVNEMYRKILQEP-LR 211 (312)
T ss_pred ECcccccCccCC--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhC-CCCcCCCCHHHHHHHHHcCC-CC
Confidence 999987532221 122334578899999999999999999999999999999995 56998888888887776654 45
Q ss_pred CCCCCcHHHHHHHHHhhccCCCCCC---CHHHHHHHHH
Q psy5539 611 APDNTPDALYDLMKLCWNMKPMNRP---SFRTIYQTLW 645 (653)
Q Consensus 611 ~~~~~~~~l~~li~~cl~~dP~~RP---s~~eil~~L~ 645 (653)
.+..++.++.+++.+||+.||.+|| ++.++++|+|
T Consensus 212 ~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~ 249 (312)
T cd05585 212 FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPF 249 (312)
T ss_pred CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCC
Confidence 6778899999999999999999997 5788888765
No 114
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1e-38 Score=324.16 Aligned_cols=248 Identities=40% Similarity=0.793 Sum_probs=214.1
Q ss_pred eecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeecC
Q psy5539 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMG 451 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~~ 451 (653)
.||+|+||.||+|... ++..+|+|.++..........+.+|+++++.++||||+++++++...+..++||||++
T Consensus 2 ~ig~g~~g~vy~~~~~------~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 75 (250)
T cd05085 2 LLGKGNFGEVFKGTLK------DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVP 75 (250)
T ss_pred ccCCCCCceEEEEEec------CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCC
Confidence 5899999999999752 3578999999876655566679999999999999999999999999999999999999
Q ss_pred CCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEec
Q psy5539 452 RGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531 (653)
Q Consensus 452 ~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~D 531 (653)
+++|.+++.. ....+++..++.++.|++.+|.|||+++++|+||||+||++++++.+||+|
T Consensus 76 ~~~L~~~~~~-------------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d 136 (250)
T cd05085 76 GGDFLSFLRK-------------------KKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISD 136 (250)
T ss_pred CCcHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECC
Confidence 9999999862 123478999999999999999999999999999999999999999999999
Q ss_pred cCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccCC
Q psy5539 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQA 611 (653)
Q Consensus 532 fGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~~ 611 (653)
||++....... ........++..|+|||.+....++.++||||||+++||+++.+..||.+....+....+..+.....
T Consensus 137 ~g~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 215 (250)
T cd05085 137 FGMSRQEDDGI-YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSC 215 (250)
T ss_pred Cccceeccccc-cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 99987542211 11222334467899999999999999999999999999999977789998888888888887766677
Q ss_pred CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 612 PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 612 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+..++..+.+++.+||+.+|++||++.++.+.|.
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 216 PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 7789999999999999999999999999988763
No 115
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.6e-39 Score=328.40 Aligned_cols=258 Identities=38% Similarity=0.733 Sum_probs=219.9
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++..++|++.+.||+|+||.||+|... ++..||+|.+...... ..++.+|+.++++++|+||+++++++. .
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~------~~~~~a~K~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~-~ 72 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYN------GHTKVAIKSLKQGSMS--PEAFLAEANLMKQLQHPRLVRLYAVVT-Q 72 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecC------CCceEEEEEecCCCCc--HHHHHHHHHHHHhcCCcCeeeEEEEEc-c
Confidence 567788999999999999999999753 3467999998754332 357889999999999999999999864 5
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..+++|||+++|+|.+++... ....+++.+++.++.|++.||+|||+.+++|+||||+||+
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~ 134 (260)
T cd05067 73 EPIYIITEYMENGSLVDFLKTP------------------EGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANIL 134 (260)
T ss_pred CCcEEEEEcCCCCCHHHHHHhc------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEE
Confidence 5789999999999999998621 2245788999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.++|+|||++....... ........++..|+|||.+....++.++||||||+++|||++++..||.+.+..++.
T Consensus 135 i~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~ 213 (260)
T cd05067 135 VSETLCCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVI 213 (260)
T ss_pred EcCCCCEEEccCcceeecCCCC-cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHH
Confidence 9999999999999987653222 112223345678999999999999999999999999999999677799988888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+.+..+...+.+...+.++.+++.+||+.+|++||+++++.+.|..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 214 QNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 8887776666777889999999999999999999999999988864
No 116
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=7.4e-39 Score=329.19 Aligned_cols=254 Identities=33% Similarity=0.614 Sum_probs=206.0
Q ss_pred eecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeecC
Q psy5539 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMG 451 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~~ 451 (653)
.||+|+||.||+|+... ......+++|.++..........+.+|+.+++.++|+||+++++.+......++||||++
T Consensus 2 ~lg~G~fg~v~~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHR---GMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEec---CCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 58999999999997533 234567999998766555566788999999999999999999999999999999999999
Q ss_pred CCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEec
Q psy5539 452 RGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531 (653)
Q Consensus 452 ~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~D 531 (653)
+|+|.++++..... .....++..++.++.||+.||+|||+++|+||||||+|||+++++.+||+|
T Consensus 79 ~g~L~~~l~~~~~~---------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~d 143 (269)
T cd05042 79 LGDLKNYLRSNRGM---------------VAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGD 143 (269)
T ss_pred CCcHHHHHHhcccc---------------ccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEec
Confidence 99999999743211 112356778899999999999999999999999999999999999999999
Q ss_pred cCccccccccccccCCCCCCCccccccchhhcc-------CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-------NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 532 fGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
||+++.....+.........++..|+|||.+.. ..++.++||||||+++|||++++..||......+....+.
T Consensus 144 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 223 (269)
T cd05042 144 YGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVV 223 (269)
T ss_pred cccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh
Confidence 999876544333333344456778999998753 3568899999999999999998888998887766655544
Q ss_pred cCCccC-----CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 605 EGNILQ-----APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 605 ~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
...... .+...+..+.+++..|| .+|++|||+++|++.|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 224 REQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred hccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 333222 23357788999999999 5999999999998876
No 117
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.9e-39 Score=337.58 Aligned_cols=253 Identities=26% Similarity=0.407 Sum_probs=204.8
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|.+.+.||+|+||.||+|+.. .++..||+|.++..........+.+|+.++++++||||+++++++..++..+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSK-----LTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEEC-----CCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 46899999999999999999864 3567899999875443333456789999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++ +|.+++... ...+++..+..++.||+.||+|||+++|+||||||+|||++++
T Consensus 80 lv~e~~~~-~l~~~l~~~-------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~ 139 (288)
T cd07871 80 LVFEYLDS-DLKQYLDNC-------------------GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEK 139 (288)
T ss_pred EEEeCCCc-CHHHHHHhc-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC
Confidence 99999975 999988621 2346888999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
+.+||+|||+++...... .......++..|+|||.+.+ ..++.++||||||+++|||++|. +||.+.+..+.+..+
T Consensus 140 ~~~kl~DfG~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~-~pf~~~~~~~~~~~~ 216 (288)
T cd07871 140 GELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGR-PMFPGSTVKEELHLI 216 (288)
T ss_pred CCEEECcCcceeeccCCC--ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHH
Confidence 999999999997543221 12233456889999998875 56899999999999999999954 688877766554443
Q ss_pred HcCCc---------------------c--------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 604 KEGNI---------------------L--------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 604 ~~~~~---------------------~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..... . ......+.+..+|+++|++.||.+|||++++++|.|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~ 287 (288)
T cd07871 217 FRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSY 287 (288)
T ss_pred HHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCC
Confidence 21100 0 001235678999999999999999999999998865
No 118
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.5e-39 Score=344.42 Aligned_cols=246 Identities=22% Similarity=0.342 Sum_probs=209.2
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEe
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFE 448 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~E 448 (653)
+.||+|+||.||+++.. .++..||+|.++... .......+.+|+++++.++||||+++++++...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREK-----ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEe
Confidence 35899999999999863 356889999997542 22334567789999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEE
Q psy5539 449 YMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVK 528 (653)
Q Consensus 449 y~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vk 528 (653)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||+++++.+|
T Consensus 76 ~~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k 135 (323)
T cd05595 76 YANGGELFFHLSR--------------------ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 135 (323)
T ss_pred CCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEE
Confidence 9999999988862 23578999999999999999999999999999999999999999999
Q ss_pred EeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc
Q psy5539 529 IADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608 (653)
Q Consensus 529 I~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~ 608 (653)
|+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++|. .||.+.+..+....+....
T Consensus 136 L~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~-~Pf~~~~~~~~~~~~~~~~- 211 (323)
T cd05595 136 ITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-LPFYNQDHERLFELILMEE- 211 (323)
T ss_pred ecccHHhccccCCC--CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCC-CCCCCCCHHHHHHHHhcCC-
Confidence 99999987532211 1122345788999999999999999999999999999999955 5888888888777776654
Q ss_pred cCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539 609 LQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW 645 (653)
Q Consensus 609 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~ 645 (653)
...+..+++++.+++.+||+.+|.+|| ++.+++++.|
T Consensus 212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~ 253 (323)
T cd05595 212 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 253 (323)
T ss_pred CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCC
Confidence 346678899999999999999999998 8999998764
No 119
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.5e-39 Score=327.89 Aligned_cols=258 Identities=34% Similarity=0.661 Sum_probs=217.8
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++..++|++.+.||+|+||.||+|... .+..+|+|.++.... ..+.+.+|+.++++++|+|++++++++. .
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~ 72 (260)
T cd05070 2 EIPRESLQLIKKLGNGQFGEVWMGTWN------GNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVS-E 72 (260)
T ss_pred CCchHHhhhhheeccccCceEEEEEec------CCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEEC-C
Confidence 456678899999999999999999763 235699999875432 2346899999999999999999999875 4
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...+++|||+++++|.++++.. ....+++..++.++.|++.||+|||+++++||||||+||+
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nil 134 (260)
T cd05070 73 EPIYIVTEYMSKGSLLDFLKDG------------------EGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANIL 134 (260)
T ss_pred CCcEEEEEecCCCcHHHHHHhc------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEE
Confidence 5689999999999999998621 1235789999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.++|+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++++..||.+.+..+..
T Consensus 135 i~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~ 213 (260)
T cd05070 135 VGDGLVCKIADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL 213 (260)
T ss_pred EeCCceEEeCCceeeeeccCccc-ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 99999999999999976532221 11122345678999999998999999999999999999999778899988888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+.+..+...+.+...+..+.+++.+||..+|.+|||+.++.+.|..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 214 EQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 8887766666677889999999999999999999999999888764
No 120
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.7e-39 Score=344.66 Aligned_cols=246 Identities=23% Similarity=0.342 Sum_probs=209.5
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEe
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFE 448 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~E 448 (653)
+.||+|+||.||+++.. .++..||+|.++... .......+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREK-----ASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEe
Confidence 35899999999999863 356889999997542 22344578899999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEE
Q psy5539 449 YMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVK 528 (653)
Q Consensus 449 y~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vk 528 (653)
|+++|+|.+++.. ...+++.++..++.||+.||+|||+++|+||||||+|||+++++.+|
T Consensus 76 y~~~g~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~k 135 (328)
T cd05593 76 YVNGGELFFHLSR--------------------ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIK 135 (328)
T ss_pred CCCCCCHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEE
Confidence 9999999988852 23578999999999999999999999999999999999999999999
Q ss_pred EeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc
Q psy5539 529 IADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI 608 (653)
Q Consensus 529 I~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~ 608 (653)
|+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++|. .||.+.+..++.+.+..+.
T Consensus 136 L~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~-~Pf~~~~~~~~~~~~~~~~- 211 (328)
T cd05593 136 ITDFGLCKEGITDA--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-LPFYNQDHEKLFELILMED- 211 (328)
T ss_pred EecCcCCccCCCcc--cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCC-CCCCCCCHHHHHHHhccCC-
Confidence 99999987532211 1122345788999999999999999999999999999999955 5888888888777776554
Q ss_pred cCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539 609 LQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW 645 (653)
Q Consensus 609 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~ 645 (653)
...+..++.++.+++++||..+|++|| ++.+++++.|
T Consensus 212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 253 (328)
T cd05593 212 IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSF 253 (328)
T ss_pred ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCC
Confidence 356778899999999999999999997 8999998865
No 121
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.4e-38 Score=327.51 Aligned_cols=267 Identities=40% Similarity=0.677 Sum_probs=217.3
Q ss_pred eecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCceEEEEeec
Q psy5539 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
.||+|+||.||+|++.. ......+++|.++........+.+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~v~~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 2 VIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred cCCCCCCceEEEEEEcC---CCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 58999999999998743 1122467999988655555566889999999999 8999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++|+|.++++.......... ..........+++.+++.++.|++.||+|||+.+++||||||+|||+++++.+||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~ 154 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPA----FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 154 (270)
T ss_pred CCCcHHHHHHhccccccccc----cccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEEC
Confidence 99999999975432111000 00011223458899999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccC
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQ 610 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~ 610 (653)
|||++.... ..........+..|+|||++....++.++||||||+++|||++.+..||.+.+..+..+.+..+....
T Consensus 155 dfgl~~~~~---~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~ 231 (270)
T cd05047 155 DFGLSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE 231 (270)
T ss_pred CCCCccccc---hhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCC
Confidence 999985321 11112223346679999999989999999999999999999986777998888888888887776666
Q ss_pred CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 611 APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 611 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
.+...+.++.+++.+||..+|.+|||+.++++.|..+.
T Consensus 232 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 232 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 67778899999999999999999999999999988764
No 122
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.2e-39 Score=345.10 Aligned_cols=254 Identities=26% Similarity=0.365 Sum_probs=207.1
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
..++|+..+.||+|+||.||+|+.. .+++.||||.+...........+.+|+++++.++|+||+++++++..++.
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 146 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHR-----PTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGE 146 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEEC-----CCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCe
Confidence 3456788899999999999999864 35678999999766555667789999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+.. ..++..+..++.||+.||+|||+++|+||||||+|||++
T Consensus 147 ~~lv~e~~~~~~L~~~~------------------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 202 (353)
T PLN00034 147 IQVLLEFMDGGSLEGTH------------------------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN 202 (353)
T ss_pred EEEEEecCCCCcccccc------------------------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc
Confidence 99999999999886432 245677889999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCCC--
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-----NKYTVESDVWAFGVCLWEIFSFALQPYYGLT-- 595 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~-- 595 (653)
+++.+||+|||+++.+.... .......++..|+|||.+.. ...+.++||||||+++|||++|.. ||....
T Consensus 203 ~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~-pf~~~~~~ 279 (353)
T PLN00034 203 SAKNVKIADFGVSRILAQTM--DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRF-PFGVGRQG 279 (353)
T ss_pred CCCCEEEcccccceeccccc--ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCC-CCCCCCCc
Confidence 99999999999997653211 12234567899999998743 234568999999999999999654 775332
Q ss_pred -HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 596 -HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 596 -~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
...+...+........+..++.++.+||.+||+.+|++||++.+|++|.|-..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~ 333 (353)
T PLN00034 280 DWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILR 333 (353)
T ss_pred cHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence 23334444444445556678899999999999999999999999999987544
No 123
>KOG0694|consensus
Probab=100.00 E-value=1e-39 Score=351.55 Aligned_cols=255 Identities=24% Similarity=0.361 Sum_probs=220.3
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhC-CCCccceEEeEE
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEF-DHPNIVKLLGVC 437 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~ 437 (653)
.+..++|.+++.||+|.||+|+++..++ ++..+|||++++.. ..+..+....|.+++... +||.++.|+..+
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~-----~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKG-----TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcC-----CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc
Confidence 5667899999999999999999999864 55799999998763 223345567787777776 599999999999
Q ss_pred ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
...+++++||||+.|||+..+. ....+++..+..++..|+.||+|||+++||+||||.+
T Consensus 439 QT~~~l~fvmey~~Ggdm~~~~---------------------~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLd 497 (694)
T KOG0694|consen 439 QTKEHLFFVMEYVAGGDLMHHI---------------------HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLD 497 (694)
T ss_pred ccCCeEEEEEEecCCCcEEEEE---------------------ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchh
Confidence 9999999999999999954322 3467899999999999999999999999999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
|||||.+|.+||+|||+++...... .......||+.|||||++.+..||...|.|||||+||||+. |..||.+.+.+
T Consensus 498 NiLLD~eGh~kiADFGlcKe~m~~g--~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~-Gq~PF~gddEe 574 (694)
T KOG0694|consen 498 NLLLDTEGHVKIADFGLCKEGMGQG--DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLV-GESPFPGDDEE 574 (694)
T ss_pred heEEcccCcEEecccccccccCCCC--CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHc-CCCCCCCCCHH
Confidence 9999999999999999998653222 24456789999999999999999999999999999999998 55699999999
Q ss_pred HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCH-----HHHHHHHH
Q psy5539 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF-----RTIYQTLW 645 (653)
Q Consensus 598 e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~eil~~L~ 645 (653)
|+++.|...+. ..|..++.+..++|++++.++|++|..+ .+|.+|++
T Consensus 575 e~FdsI~~d~~-~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpF 626 (694)
T KOG0694|consen 575 EVFDSIVNDEV-RYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPF 626 (694)
T ss_pred HHHHHHhcCCC-CCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCc
Confidence 99999988764 4778899999999999999999999854 67777763
No 124
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.2e-39 Score=342.98 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=211.0
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc---cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA---SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~---~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+++... ....++.||||+++... .......+.+|+.+++.++||||+++++++..++..++||
T Consensus 2 ~~lg~G~~g~V~~~~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVT--GADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcc--cCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEE
Confidence 579999999999998642 23467899999987532 1223346788999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.++++. ...+++..+..++.||+.||+|||+++|+||||||+|||+++++.+
T Consensus 80 e~~~~~~L~~~~~~--------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~ 139 (323)
T cd05584 80 EYLSGGELFMHLER--------------------EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHV 139 (323)
T ss_pred eCCCCchHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCE
Confidence 99999999999862 2346788889999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++| ..||.+.+..+....+..+.
T Consensus 140 kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G-~~pf~~~~~~~~~~~~~~~~ 216 (323)
T cd05584 140 KLTDFGLCKESIHEG--TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTG-APPFTAENRKKTIDKILKGK 216 (323)
T ss_pred EEeeCcCCeecccCC--CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcC-CCCCCCCCHHHHHHHHHcCC
Confidence 999999987532221 112234578999999999999999999999999999999995 56998888888888887765
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW 645 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~ 645 (653)
...+..++.++.+++++||+.+|++|| ++++++++.|
T Consensus 217 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~ 258 (323)
T cd05584 217 -LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPF 258 (323)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCC
Confidence 356777899999999999999999999 8999998875
No 125
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.1e-39 Score=330.02 Aligned_cols=261 Identities=44% Similarity=0.836 Sum_probs=219.1
Q ss_pred eecccCCeeEEEEEeCCCC-CCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 372 DLGQGAFGRVFQAKAPGLL-KHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~-~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
.||+|+||.||+|+..... .......+|||.+...........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 5899999999999875422 123346899999876554445667899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC-----
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM----- 525 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~----- 525 (653)
++|+|.++++...... .....+++.+++.++.|++.||.|||+.+++|+||||+||++++++
T Consensus 82 ~~~~L~~~l~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~ 148 (269)
T cd05044 82 EGGDLLSYLRDARVER-------------FGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADR 148 (269)
T ss_pred CCCcHHHHHHHhhhcc-------------cCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCc
Confidence 9999999997432110 0234578899999999999999999999999999999999999887
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~ 605 (653)
.++|+|||+++.....+..........+..|+|||.+.++.++.++||||||+++|||++.+..||...+..+....+..
T Consensus 149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 228 (269)
T cd05044 149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA 228 (269)
T ss_pred ceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc
Confidence 89999999998664443333333445577899999999999999999999999999999967779988888888888877
Q ss_pred CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 606 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.....+...+..+.+++.+||..+|.+||++.+|++.|.
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 229 GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 7666677788999999999999999999999999998875
No 126
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=9e-39 Score=329.46 Aligned_cols=271 Identities=40% Similarity=0.774 Sum_probs=225.9
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
..++|++.+.||+|+||.||+|+............|++|.+.....+...+++.+|++++++++|+||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 44678899999999999999999765444456678999998765555466789999999999999999999999999899
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.++++...... .......+++..+..++.|++.||+|||+.+|+||||||+|||++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~-----------~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~ 151 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKD-----------EKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS 151 (275)
T ss_pred ceEEEEecCCCcHHHHHHhccccc-----------ccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe
Confidence 999999999999999997332110 001123589999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.++|+|||+++........ ......++..|+|||.+.+..++.++||||||+++|+|++++..||.+....++...
T Consensus 152 ~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~ 230 (275)
T cd05046 152 SQREVKVSLLSLSKDVYNSEYY-KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNR 230 (275)
T ss_pred CCCcEEEcccccccccCccccc-ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHH
Confidence 9999999999998754322221 223345577899999998888999999999999999999988889988888888888
Q ss_pred HHcCCcc-CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKEGNIL-QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+..+... ..+..++..+.+++.+||+.+|.+||++.++++.|.
T Consensus 231 ~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 231 LQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 7766542 345678899999999999999999999999998875
No 127
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.2e-38 Score=324.87 Aligned_cols=253 Identities=36% Similarity=0.728 Sum_probs=219.9
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+..++|++.+.||+|+||.||+|... ++.||+|.++.... ..+.+.+|+.++++++|+||+++++++....
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~-------~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 73 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYR-------GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGN 73 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEec-------CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCC
Confidence 34567889999999999999999863 47799999986543 4567899999999999999999999999899
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+++++|.++++.. ....+++..+..++.|++.||.|||+++++|+||||+||++
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili 135 (256)
T cd05039 74 PLYIVTEYMAKGSLVDYLRSR------------------GRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV 135 (256)
T ss_pred CeEEEEEecCCCcHHHHHHhc------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE
Confidence 999999999999999999722 11358999999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++++.+||+|||+++...... .....+..|+|||.+..+.++.++||||||+++||+++.+..||......++..
T Consensus 136 ~~~~~~~l~d~g~~~~~~~~~-----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 210 (256)
T cd05039 136 SEDLVAKVSDFGLAKEASQGQ-----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP 210 (256)
T ss_pred eCCCCEEEccccccccccccc-----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 999999999999997652111 123446789999999989999999999999999999986777998888888888
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.+..+.....+..+++++.+++.+||..+|++||+++++++.|..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 211 HVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred HHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 887766566677789999999999999999999999999998864
No 128
>KOG0585|consensus
Probab=100.00 E-value=1.2e-39 Score=336.64 Aligned_cols=257 Identities=24% Similarity=0.362 Sum_probs=210.9
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH---------H----HHHHHHHHHHHHhhCCCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE---------Y----LQTDFEREACLLAEFDHPN 429 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~---------~----~~~~f~~Ei~il~~l~Hpn 429 (653)
..++|.+.+.||+|.||.|-+|+.. .+++.||||++...... . -.+...+||.+|++++|||
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~-----~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~n 169 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDE-----VDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPN 169 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeec-----CCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcC
Confidence 3478999999999999999999853 57789999998643211 1 1246889999999999999
Q ss_pred cceEEeEEec--CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCC-CCHHHHHHHHHHHHHHHHHhhh
Q psy5539 430 IVKLLGVCAV--GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ-LSTCDLITIALQIASGMVYLSD 506 (653)
Q Consensus 430 Iv~l~g~~~~--~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~i~~qia~gL~yLH~ 506 (653)
||+|+.+..+ .+.+|||+||+..|.+.+- ....+ ++..++++++++++.||+|||.
T Consensus 170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~---------------------p~d~~els~~~Ar~ylrDvv~GLEYLH~ 228 (576)
T KOG0585|consen 170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWC---------------------PPDKPELSEQQARKYLRDVVLGLEYLHY 228 (576)
T ss_pred eeEEEEeecCcccCceEEEEEeccCCccccC---------------------CCCcccccHHHHHHHHHHHHHHHHHHHh
Confidence 9999999865 5689999999998876431 11223 8999999999999999999999
Q ss_pred CCceecCCCCCCEeEcCCCcEEEeccCcccccccccc---ccCCCCCCCccccccchhhccCC----CCCchhHHHHHHH
Q psy5539 507 RKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY---YKGDENDAIPVRWMPLESILYNK----YTVESDVWAFGVC 579 (653)
Q Consensus 507 ~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~----~t~ksDVwSlGvv 579 (653)
+|||||||||+|+||+++|+|||+|||.+......+. ...-....||+.|||||...++. .+.+.||||+||+
T Consensus 229 QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVT 308 (576)
T KOG0585|consen 229 QGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVT 308 (576)
T ss_pred cCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhh
Confidence 9999999999999999999999999999875422111 01112367899999999988743 3578999999999
Q ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCccCCCCC--CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 580 LWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDN--TPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 580 l~ellt~~~~p~~~~~~~e~~~~i~~~~~~~~~~~--~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
||-|+-|. .||.+....+++++|....+ .+|+. +.+++++||.++|++||++|.++.+|..|+|..
T Consensus 309 LYCllfG~-~PF~~~~~~~l~~KIvn~pL-~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 309 LYCLLFGQ-LPFFDDFELELFDKIVNDPL-EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred HHHhhhcc-CCcccchHHHHHHHHhcCcc-cCCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 99999754 59999999999999987653 45543 688999999999999999999999999999854
No 129
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.3e-39 Score=339.71 Aligned_cols=256 Identities=22% Similarity=0.356 Sum_probs=209.2
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+..++|++.+.||+|+||.||++++. .++..+|+|.++..........+.+|+++++.++|+||+++++++..++
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 76 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHK-----PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 76 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEEC-----CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC
Confidence 45678999999999999999999864 3567899999876655556677999999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCCEe
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCL 520 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-~ivHrDLkp~NIL 520 (653)
..++||||+++|+|.++++. ...+++..+..++.|++.||.|||+. +++||||||+|||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nil 136 (333)
T cd06650 77 EISICMEHMDGGSLDQVLKK--------------------AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 136 (333)
T ss_pred EEEEEEecCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEE
Confidence 99999999999999999862 23478888999999999999999975 7999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.+||+|||++...... ......++..|+|||.+.+..++.++||||||+++|||++|.. ||......++.
T Consensus 137 i~~~~~~kL~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~-p~~~~~~~~~~ 211 (333)
T cd06650 137 VNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRY-PIPPPDAKELE 211 (333)
T ss_pred EcCCCCEEEeeCCcchhhhhh----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCC-CCCCcchhHHH
Confidence 999999999999998754221 1223457889999999999899999999999999999999655 77654433322
Q ss_pred HH--------------------------------------------HHcCCccCCC-CCCcHHHHHHHHHhhccCCCCCC
Q psy5539 601 KY--------------------------------------------IKEGNILQAP-DNTPDALYDLMKLCWNMKPMNRP 635 (653)
Q Consensus 601 ~~--------------------------------------------i~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RP 635 (653)
.. +........+ ...+.++.+|+.+||+.||++||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rp 291 (333)
T cd06650 212 LMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERA 291 (333)
T ss_pred HHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCc
Confidence 11 1111111111 12567899999999999999999
Q ss_pred CHHHHHHHHHHH
Q psy5539 636 SFRTIYQTLWNI 647 (653)
Q Consensus 636 s~~eil~~L~~l 647 (653)
|+.+++++.|--
T Consensus 292 t~~ell~h~~~~ 303 (333)
T cd06650 292 DLKQLMVHAFIK 303 (333)
T ss_pred CHHHHhhCHHHh
Confidence 999999988743
No 130
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2e-38 Score=324.45 Aligned_cols=258 Identities=36% Similarity=0.687 Sum_probs=216.1
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++..++|.+.+.||+|+||.||+|...+ ...+|+|.++.... ..+.+.+|+.++++++|+|++++++++. .
T Consensus 2 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~------~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~ 72 (260)
T cd05069 2 EIPRESLRLDVKLGQGCFGEVWMGTWNG------TTKVAIKTLKPGTM--MPEAFLQEAQIMKKLRHDKLVPLYAVVS-E 72 (260)
T ss_pred cCChHHeeeeeeecCcCCCeEEEEEEcC------CceEEEEEcccCCc--cHHHHHHHHHHHHhCCCCCeeeEEEEEc-C
Confidence 3455678999999999999999998643 23589998875432 2456889999999999999999999875 4
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..++||||+++|+|.++++.. ....+++..+..++.|++.||.|||+.+++|+||||+||+
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nil 134 (260)
T cd05069 73 EPIYIVTEFMGKGSLLDFLKEG------------------DGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANIL 134 (260)
T ss_pred CCcEEEEEcCCCCCHHHHHhhC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEE
Confidence 5689999999999999999621 1234788999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.++|+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++++..||.+....+..
T Consensus 135 l~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~ 213 (260)
T cd05069 135 VGDNLVCKIADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVL 213 (260)
T ss_pred EcCCCeEEECCCccceEccCCcc-cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999976532221 11222345678999999999999999999999999999999777899988888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+.+..+.....+...+..+.+++++||..+|.+||++++|.+.|.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 214 EQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 8777765555667789999999999999999999999999988864
No 131
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.4e-38 Score=324.60 Aligned_cols=251 Identities=35% Similarity=0.680 Sum_probs=214.9
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEe-cCC
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCA-VGK 441 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~-~~~ 441 (653)
...+|++.+.||+|+||.||++... +..||+|.++... ..+.+.+|+.++++++|+|++++++++. .+.
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-------~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 73 (256)
T cd05082 4 NMKELKLLQTIGKGEFGDVMLGDYR-------GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 73 (256)
T ss_pred cHHhCeeeeeecccCCCeEEEEEEc-------CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCC
Confidence 3457889999999999999999754 3679999987543 2457889999999999999999999764 456
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++++||+++|+|.++++.. ....+++..++.++.|++.||+|||+++++||||||+||++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~ 135 (256)
T cd05082 74 GLYIVTEYMAKGSLVDYLRSR------------------GRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV 135 (256)
T ss_pred ceEEEEECCCCCcHHHHHHhc------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE
Confidence 789999999999999998622 12347899999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++++.+||+|||+++..... ......+..|+|||.+....++.++||||||+++|||++.+..||...+..++..
T Consensus 136 ~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~ 210 (256)
T cd05082 136 SEDNVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP 210 (256)
T ss_pred cCCCcEEecCCccceecccc-----CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999998754221 1233446689999999998999999999999999999986777998888888888
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.+..+.....++.++..+.+++.+||+.+|++|||+.++++.|..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 211 RVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 887776666677889999999999999999999999999998865
No 132
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.8e-38 Score=324.52 Aligned_cols=259 Identities=39% Similarity=0.731 Sum_probs=221.7
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
+++.++|.+.+.||+|+||.||+|...+ ...||||.++.... ..+++.+|+.++++++|+||+++++++...
T Consensus 2 ~~~~~~~~i~~~ig~g~~~~v~~~~~~~------~~~~~vK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (261)
T cd05034 2 EIPRESLKLERKLGAGQFGEVWMGTWNG------TTKVAVKTLKPGTM--SPEAFLQEAQIMKKLRHDKLVQLYAVCSEE 73 (261)
T ss_pred ccchhheeeeeeeccCcceEEEEEEEcC------CceEEEEEecCCcc--CHHHHHHHHHHHhhCCCCCEeeeeeeeecC
Confidence 5678899999999999999999998632 36699999875433 235689999999999999999999999988
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...++||||+++++|.+++... ....+++..+..++.|++.||.|||+++++|+||||+||+
T Consensus 74 ~~~~~v~e~~~~~~L~~~i~~~------------------~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nil 135 (261)
T cd05034 74 EPIYIVTEYMSKGSLLDFLKSG------------------EGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNIL 135 (261)
T ss_pred CceEEEEeccCCCCHHHHHhcc------------------ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEE
Confidence 9999999999999999999621 1245789999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+++++.+||+|||++....... .........+..|+|||.+.+..++.++||||||+++||+++++..||.+.+..+..
T Consensus 136 i~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~ 214 (261)
T cd05034 136 VGENLVCKIADFGLARLIEDDE-YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVL 214 (261)
T ss_pred EcCCCCEEECccccceeccchh-hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999999999987653221 112223334568999999999999999999999999999999777899988888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+.+..+.....+...+.++.+++.+||..+|.+||+++++.+.|+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 215 EQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 8887766556677789999999999999999999999999988764
No 133
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.5e-39 Score=333.98 Aligned_cols=254 Identities=22% Similarity=0.298 Sum_probs=204.0
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
++|++.+.||+|+||.||+|+.. .++..||+|+++... .....+.+.+|+.+++.++||||+++++++..++..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHK-----ETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEEC-----CCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEE
Confidence 46889999999999999999864 356789999987542 233455788999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||++++.|..+.+ ....+++..+..++.||+.||.|||+.+|+||||||+|||++.
T Consensus 76 ~lv~e~~~~~~l~~~~~--------------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~ 135 (287)
T cd07848 76 YLVFEYVEKNMLELLEE--------------------MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH 135 (287)
T ss_pred EEEEecCCCCHHHHHHh--------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence 99999999876665432 1235788999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++|. +||.+.+..+....+
T Consensus 136 ~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~-~pf~~~~~~~~~~~~ 213 (287)
T cd07848 136 NDVLKLCDFGFARNLSEGSN-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQ-PLFPGESEIDQLFTI 213 (287)
T ss_pred CCcEEEeeccCccccccccc-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCC-CCCCCCCHHHHHHHH
Confidence 99999999999976532211 1122345788999999999999999999999999999999954 688876654433222
Q ss_pred HcC--C--------------c--cC-------------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 604 KEG--N--------------I--LQ-------------APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 604 ~~~--~--------------~--~~-------------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
... . . .. ....++.++.+|+++||+.||++|||++++++|.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~ 286 (287)
T cd07848 214 QKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPA 286 (287)
T ss_pred HHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 110 0 0 00 01135778999999999999999999999998865
No 134
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=8.1e-39 Score=332.57 Aligned_cols=254 Identities=26% Similarity=0.438 Sum_probs=200.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhC---CCCccceEEeEEe--
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEF---DHPNIVKLLGVCA-- 438 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l---~HpnIv~l~g~~~-- 438 (653)
++|++.+.||+|+||.||+|+... ..+..||+|.++.... ......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~ 76 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLK----NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 76 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcC----CCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecc
Confidence 367889999999999999998632 2457899998864322 22233456777777665 6999999999985
Q ss_pred ---cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539 439 ---VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515 (653)
Q Consensus 439 ---~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk 515 (653)
.....++||||++ ++|.+++... ....+++..+..++.||+.||+|||+++|+|||||
T Consensus 77 ~~~~~~~~~lv~e~~~-~~l~~~~~~~------------------~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlk 137 (290)
T cd07862 77 RTDRETKLTLVFEHVD-QDLTTYLDKV------------------PEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK 137 (290)
T ss_pred cCCCCCcEEEEEccCC-CCHHHHHHhC------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence 2456899999996 6999998622 12347899999999999999999999999999999
Q ss_pred CCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
|+|||+++++.+||+|||+++..... .......++..|+|||.+....++.++||||||+++|||++ +.+||.+.+
T Consensus 138 p~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~~f~~~~ 213 (290)
T cd07862 138 PQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSS 213 (290)
T ss_pred HHHEEEcCCCCEEEccccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHc-CCCCcCCCC
Confidence 99999999999999999999754322 12234457889999999999999999999999999999998 566888877
Q ss_pred HHHHHHHHHcCCccC--------------------------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 596 HEEVVKYIKEGNILQ--------------------------APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 596 ~~e~~~~i~~~~~~~--------------------------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..+.+..+.+..... .....+..+.+++.+||+.+|++|||+.++++|.|
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~ 289 (290)
T cd07862 214 DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289 (290)
T ss_pred HHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCC
Confidence 766655554321100 01245678899999999999999999999998764
No 135
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.9e-38 Score=324.97 Aligned_cols=256 Identities=34% Similarity=0.626 Sum_probs=203.9
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
+.||+|+||.||+|...+ ......+|+|.++..........+.+|+.++++++||||+++++++......++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNS---GYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcC---CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECC
Confidence 358999999999998642 23456799999987655555567899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++|+|.++++..... .....++..++.++.|++.||+|||+.+++|+||||+||++++++.+||+
T Consensus 78 ~~g~L~~~l~~~~~~---------------~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~ 142 (269)
T cd05087 78 PLGDLKGYLRSCRKA---------------ELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIG 142 (269)
T ss_pred CCCcHHHHHHHhhhc---------------ccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEC
Confidence 999999999743211 12345677888999999999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccC-------CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-------KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-------~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
|||+++.....+.........++..|+|||.+... .++.++||||||+++|||++.|..||......+.....
T Consensus 143 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~ 222 (269)
T cd05087 143 DYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYT 222 (269)
T ss_pred CccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHH
Confidence 99999765433333333344567889999988642 35889999999999999997566799877766654443
Q ss_pred HcCCccCCC-----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 604 KEGNILQAP-----DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 604 ~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..+.....+ ...+..+.++|..|| .+|++|||+++|++.|.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 223 VREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred hhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 332222221 235678999999999 58999999999998763
No 136
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=8e-39 Score=338.81 Aligned_cols=249 Identities=24% Similarity=0.355 Sum_probs=208.9
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHH---hhCCCCccceEEeEEecCC
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLL---AEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il---~~l~HpnIv~l~g~~~~~~ 441 (653)
|++.+.||+|+||.||+|+.. .+++.||||.++... .....+.+.+|++++ +.++||||+++++++..++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYK-----KTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC
Confidence 567889999999999999864 356889999997542 122334566666554 5678999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+++|+|..+++ ...+++..++.++.||+.||+|||+.+|+||||||+|||+
T Consensus 76 ~~~lv~E~~~~~~L~~~~~---------------------~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill 134 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIH---------------------TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL 134 (324)
T ss_pred EEEEEEcCCCCCcHHHHhh---------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE
Confidence 9999999999999988875 1358899999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++++.+||+|||+++...... .......++..|||||.+.+..++.++||||||+++|||++| ..||.+.+..++..
T Consensus 135 ~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G-~~pf~~~~~~~~~~ 211 (324)
T cd05589 135 DTEGFVKIADFGLCKEGMGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVG-ESPFPGDDEEEVFD 211 (324)
T ss_pred CCCCcEEeCcccCCccCCCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhC-CCCCCCCCHHHHHH
Confidence 999999999999986532211 112334578899999999999999999999999999999995 45998888888888
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW 645 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~ 645 (653)
.+..+.. ..+..++..+.+++.+||+.||.+|| ++.+++++.|
T Consensus 212 ~i~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~ 259 (324)
T cd05589 212 SIVNDEV-RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPF 259 (324)
T ss_pred HHHhCCC-CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCC
Confidence 8877654 46677899999999999999999999 6888888764
No 137
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.1e-38 Score=324.90 Aligned_cols=265 Identities=42% Similarity=0.752 Sum_probs=218.9
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC----
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK---- 441 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~---- 441 (653)
|.+.+.||+|+||.||+|.+.. ....+..||||.++... .....+++.+|+.++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKS--EDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeec--cCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence 3566789999999999998643 23456899999987543 3334567889999999999999999999886432
Q ss_pred --ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 442 --PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 442 --~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
..++++||+.+|+|.+++..... ......+++..++.++.|++.||+|||+.+|+||||||+||
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~--------------~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~ni 144 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRI--------------GEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNC 144 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcc--------------cCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhE
Confidence 24788999999999998852210 01123578899999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
++++++.+||+|||+++...............++..|++||.+....++.++||||||+++|||++++.+||.+.+..+.
T Consensus 145 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~ 224 (273)
T cd05074 145 MLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI 224 (273)
T ss_pred EEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHH
Confidence 99999999999999998764433333333445567899999999999999999999999999999988889998888888
Q ss_pred HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 600 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
...+..+.....+...+..+.+++.+||+.+|++||++.++++.|..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 225 YNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 888877766666667889999999999999999999999999998765
No 138
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.7e-38 Score=327.59 Aligned_cols=259 Identities=34% Similarity=0.599 Sum_probs=208.3
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC--CceE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--KPMC 444 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--~~~~ 444 (653)
+++.+.||+|+||+||++.... ....++..||+|.++..........+.+|++++++++||||+++++++... ...+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDP-ANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceeceecccCCCcEEEEeeEcc-ccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence 4788999999999999876532 233466789999998665545567789999999999999999999987653 4579
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++|+|.+++.. ..+++.+++.++.|++.||.|||+++|+||||||+|||++++
T Consensus 85 lv~e~~~~~~l~~~~~~---------------------~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~ 143 (283)
T cd05080 85 LIMEYVPLGSLRDYLPK---------------------HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDND 143 (283)
T ss_pred EEecCCCCCCHHHHHHH---------------------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCC
Confidence 99999999999999861 248999999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccc-cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC--------
Q psy5539 525 MVVKIADFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT-------- 595 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~-------- 595 (653)
+.+||+|||+++........ .......++..|+|||.+....++.++||||||+++|||++|.. |+....
T Consensus 144 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~-p~~~~~~~~~~~~~ 222 (283)
T cd05080 144 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCD-SKQSPPKKFEEMIG 222 (283)
T ss_pred CcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCC-CCCCCcchhhhhhc
Confidence 99999999999765332211 11223345667999999998999999999999999999999654 554321
Q ss_pred -------HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 596 -------HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 596 -------~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
...+.+.+..+...+.+..++.++.+++.+||+.+|++|||+++|++.|..++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 223 PKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred ccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11122223333334456678899999999999999999999999999998775
No 139
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4e-38 Score=322.23 Aligned_cols=258 Identities=35% Similarity=0.687 Sum_probs=219.6
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++..++|++.+.||+|+||.||+|... .+..+|+|.++... ...+.+.+|++++++++|+||+++++++..
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~- 72 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYN------KHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVTK- 72 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEec------CCccEEEEecCCCh--hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-
Confidence 567789999999999999999999753 23569999887542 234578899999999999999999999877
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...+++|||+++|+|.+++... ....+++..++.++.|++.||.|||+.+++|+||||+||+
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~ 134 (260)
T cd05073 73 EPIYIITEFMAKGSLLDFLKSD------------------EGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 134 (260)
T ss_pred CCeEEEEEeCCCCcHHHHHHhC------------------CccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEE
Confidence 7789999999999999999621 1235788899999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
++.++.+||+|||++........ .......++..|+|||.+....++.++||||||+++|++++++..||.+.+..++.
T Consensus 135 i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~ 213 (260)
T cd05073 135 VSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 213 (260)
T ss_pred EcCCCcEEECCCcceeeccCCCc-ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 99999999999999875432221 12223345678999999999899999999999999999999788899988888888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
..+..+...+.+...+.++.+++.+||+.+|++||++.++++.|..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 214 RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 8888776666677888999999999999999999999999988864
No 140
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.6e-39 Score=341.61 Aligned_cols=246 Identities=24% Similarity=0.341 Sum_probs=208.8
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEe
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFE 448 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~E 448 (653)
+.||+|+||.||+++.. .++..||+|.++... .......+.+|++++..++||||+++++++...+..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEK-----ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEe
Confidence 35899999999999863 356889999997542 22334567889999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCCEeEcCCCcE
Q psy5539 449 YMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 449 y~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivHrDLkp~NILl~~~~~v 527 (653)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+
T Consensus 76 ~~~~~~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~ 135 (325)
T cd05594 76 YANGGELFFHLSR--------------------ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 135 (325)
T ss_pred CCCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCE
Confidence 9999999998852 2357899999999999999999997 799999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++...... .......+++.|||||.+.+..++.++||||||+++|||++|. .||.+.+.++....+....
T Consensus 136 kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~-~Pf~~~~~~~~~~~i~~~~ 212 (325)
T cd05594 136 KITDFGLCKEGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR-LPFYNQDHEKLFELILMEE 212 (325)
T ss_pred EEecCCCCeecCCCC--cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCC-CCCCCCCHHHHHHHHhcCC
Confidence 999999987532211 1112345789999999999999999999999999999999954 5898888888887776654
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW 645 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~ 645 (653)
...+...+.++.+++.+||+.||++|+ ++.++++|.|
T Consensus 213 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 254 (325)
T cd05594 213 -IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKF 254 (325)
T ss_pred -CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCC
Confidence 356777899999999999999999997 8999998865
No 141
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=4.2e-38 Score=319.77 Aligned_cols=250 Identities=40% Similarity=0.761 Sum_probs=214.3
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
+.||+|+||.||+|... . ++.|++|.++..........+.+|++++++++|+||+++++++......++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~-----~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLK-----G-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEe-----C-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcC
Confidence 36899999999999863 2 57899999886655455678999999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++++|.++++. ....+++..++.++.+++.||+|||+++++||||||+|||+++++.+||+
T Consensus 75 ~~~~l~~~l~~-------------------~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~ 135 (251)
T cd05041 75 PGGSLLTFLRK-------------------KKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKIS 135 (251)
T ss_pred CCCcHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEe
Confidence 99999999862 12357888999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccC
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQ 610 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~ 610 (653)
|||++.................+..|+|||.+.++.++.++||||||+++|||++++..||.+....+....+..+....
T Consensus 136 d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~ 215 (251)
T cd05041 136 DFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP 215 (251)
T ss_pred eccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC
Confidence 99999765322221122223446779999999989999999999999999999998888998888888888777765556
Q ss_pred CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 611 APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 611 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.++..+.++.+++.+||..+|.+||++.+|++.|.
T Consensus 216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 67788999999999999999999999999998875
No 142
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.6e-38 Score=333.03 Aligned_cols=255 Identities=25% Similarity=0.398 Sum_probs=201.1
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.++|++.+.||+|+||.||+|+.. .+++.||||.++..........+.+|+.+++.++||||+++++++......
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSK-----VNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEEC-----CCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeE
Confidence 367899999999999999999864 356789999987543333344678899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+. ++|.+++.. ....+++..+..++.||+.||+|||+++|+||||||+|||+++
T Consensus 79 ~lv~e~~~-~~l~~~~~~-------------------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~ 138 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDK-------------------HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD 138 (303)
T ss_pred EEEEECCC-cCHHHHHHh-------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC
Confidence 99999995 688888862 1245788899999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTH-EEVVK 601 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~-~e~~~ 601 (653)
++.+||+|||+++...... .......++..|+|||.+.+ ..++.++||||||+++|||++|. .||.+... .+..+
T Consensus 139 ~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~-~pf~~~~~~~~~~~ 215 (303)
T cd07869 139 TGELKLADFGLARAKSVPS--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGV-AAFPGMKDIQDQLE 215 (303)
T ss_pred CCCEEECCCCcceeccCCC--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCC-CCCCCCccHHHHHH
Confidence 9999999999987542211 12233456889999999875 45889999999999999999954 58876432 23222
Q ss_pred HHHc--CCc--------------------cCCC---------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 602 YIKE--GNI--------------------LQAP---------DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 602 ~i~~--~~~--------------------~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.+.. +.. ...+ ...+..+.+|+.+|++.||++|||++++++|.|-
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f 291 (303)
T cd07869 216 RIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYF 291 (303)
T ss_pred HHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccc
Confidence 2211 000 0000 1234678899999999999999999999998763
No 143
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.1e-38 Score=337.78 Aligned_cols=251 Identities=25% Similarity=0.399 Sum_probs=210.9
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCC-ccceEEeEEecCCc
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHP-NIVKLLGVCAVGKP 442 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~Hp-nIv~l~g~~~~~~~ 442 (653)
+|++.+.||+|+||.||+|+.. .+++.||||.++... .....+.+..|++++..++|+ +|+++++++...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERK-----GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCE
Confidence 4788999999999999999864 345789999987542 223345678899999999765 58889999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||++
T Consensus 76 ~~lv~E~~~~g~L~~~~~~--------------------~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~ 135 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQ--------------------VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD 135 (324)
T ss_pred EEEEEcCCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc
Confidence 9999999999999999862 23578899999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||+++...... .......++..|+|||.+.+..++.++||||||+++|||++ |..||.+.+..+....
T Consensus 136 ~~~~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-G~~pf~~~~~~~~~~~ 212 (324)
T cd05587 136 AEGHIKIADFGMCKENIFGG--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQPPFDGEDEDELFQS 212 (324)
T ss_pred CCCCEEEeecCcceecCCCC--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHh-CCCCCCCCCHHHHHHH
Confidence 99999999999986432111 11223457889999999999999999999999999999999 4569999888888888
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCH-----HHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF-----RTIYQTLW 645 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~eil~~L~ 645 (653)
+.... ...+...+.++.+++++||+.+|.+|++. ++++++++
T Consensus 213 i~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~ 259 (324)
T cd05587 213 IMEHN-VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAF 259 (324)
T ss_pred HHcCC-CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCC
Confidence 87755 35667789999999999999999999976 78887754
No 144
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=6.9e-39 Score=338.81 Aligned_cols=246 Identities=23% Similarity=0.352 Sum_probs=208.1
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+|+.. .+++.||||.++... .......+.+|+.++..+ +||||+++++++...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLK-----ESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEc-----CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEE
Confidence 35899999999999864 356889999987542 222345667888888876 6999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+++|+||||||+|||+++++.+
T Consensus 76 Ey~~~g~L~~~i~~--------------------~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~ 135 (320)
T cd05590 76 EFVNGGDLMFHIQK--------------------SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHC 135 (320)
T ss_pred cCCCCchHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcE
Confidence 99999999998862 2357889999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++| ..||.+.+..++...+..+.
T Consensus 136 kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g-~~Pf~~~~~~~~~~~i~~~~ 212 (320)
T cd05590 136 KLADFGMCKEGIFNG--KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAPFEAENEDDLFEAILNDE 212 (320)
T ss_pred EEeeCCCCeecCcCC--CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhC-CCCCCCCCHHHHHHHHhcCC
Confidence 999999987532211 122334678999999999999999999999999999999995 56999999888888887765
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCH------HHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSF------RTIYQTLW 645 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~eil~~L~ 645 (653)
. ..+..++.++.+++++||+.||.+||++ +++++|.|
T Consensus 213 ~-~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~ 255 (320)
T cd05590 213 V-VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPF 255 (320)
T ss_pred C-CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCC
Confidence 3 4566789999999999999999999998 88888765
No 145
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.6e-38 Score=341.88 Aligned_cols=255 Identities=20% Similarity=0.282 Sum_probs=208.5
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++++.||+|+||+||+|+.. .+++.||||+++... .......+.+|+.++.+++|+||+++++.+..+..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKK-----DTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCe
Confidence 47889999999999999999863 356789999997532 22334568899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.+|||||+++|+|.+++.. ...+++..+..++.|++.||+|||+++|+||||||+|||++
T Consensus 76 ~~lv~E~~~gg~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~ 135 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMK--------------------KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD 135 (363)
T ss_pred EEEEEcCCCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC
Confidence 9999999999999999862 24588999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccc---------------------------------cCCCCCCCccccccchhhccCCCCC
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYY---------------------------------KGDENDAIPVRWMPLESILYNKYTV 569 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~---------------------------------~~~~~~~~t~~y~aPE~~~~~~~t~ 569 (653)
+++.+||+|||+++.+...... .......||+.|+|||.+.+..++.
T Consensus 136 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~ 215 (363)
T cd05628 136 SKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNK 215 (363)
T ss_pred CCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCC
Confidence 9999999999998754221100 0011235789999999999999999
Q ss_pred chhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-ccCCCC--CCcHHHHHHHHHhhc--cCCCCCCCHHHHHHHH
Q psy5539 570 ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN-ILQAPD--NTPDALYDLMKLCWN--MKPMNRPSFRTIYQTL 644 (653)
Q Consensus 570 ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~-~~~~~~--~~~~~l~~li~~cl~--~dP~~RPs~~eil~~L 644 (653)
++|||||||++|||++| ..||.+.+..+....+.... ....|. .+++++.+++.+++. .++..||++++|++|.
T Consensus 216 ~~DvwSlGvil~ell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp 294 (363)
T cd05628 216 LCDWWSLGVIMYEMLIG-YPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNP 294 (363)
T ss_pred chhhhhhHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCC
Confidence 99999999999999995 56999888888888776532 222332 467899999998654 2333578999999986
Q ss_pred H
Q psy5539 645 W 645 (653)
Q Consensus 645 ~ 645 (653)
|
T Consensus 295 ~ 295 (363)
T cd05628 295 F 295 (363)
T ss_pred C
Confidence 4
No 146
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=8.3e-39 Score=338.24 Aligned_cols=246 Identities=21% Similarity=0.302 Sum_probs=208.6
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+|+.. .++..||||+++... .....+.+..|.+++..+ +||||+++++++..++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELK-----GTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEEC-----CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEE
Confidence 35899999999999864 356789999987542 223344577888888866 7999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+++|+||||||+|||+++++.+
T Consensus 76 E~~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~ 135 (321)
T cd05591 76 EYVNGGDLMFQIQR--------------------SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHC 135 (321)
T ss_pred eCCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCE
Confidence 99999999998862 2357888999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||.+.+..++.+.+..+.
T Consensus 136 kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~ 212 (321)
T cd05591 136 KLADFGMCKEGILNG--VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMA-GQPPFEADNEDDLFESILHDD 212 (321)
T ss_pred EEeecccceecccCC--ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhc-CCCCCCCCCHHHHHHHHHcCC
Confidence 999999987532221 11233457889999999999999999999999999999999 456999999888888887765
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCC-------CHHHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRP-------SFRTIYQTLW 645 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-------s~~eil~~L~ 645 (653)
. ..+..++.++.+++.+||+.+|++|| ++++++++.|
T Consensus 213 ~-~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~ 256 (321)
T cd05591 213 V-LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPF 256 (321)
T ss_pred C-CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCc
Confidence 3 45566889999999999999999999 8999998875
No 147
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.1e-38 Score=336.72 Aligned_cols=246 Identities=23% Similarity=0.360 Sum_probs=203.4
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhh-CCCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAE-FDHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~-l~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+|+.. .++..||+|.++... .....+.+..|..++.. .+||||+++++++..++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELK-----GTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence 35899999999999864 356789999997542 12223345566666664 48999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.++++. ...+++..+..++.||+.||.|||+++|+||||||+|||++.++.+
T Consensus 76 e~~~gg~L~~~~~~--------------------~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~ 135 (316)
T cd05592 76 EYLNGGDLMFHIQS--------------------SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHI 135 (316)
T ss_pred cCCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCE
Confidence 99999999998862 2357888999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++...... .......+|+.|+|||.+.+..++.++||||||+++|||++| ..||.+.+..++...+....
T Consensus 136 kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G-~~Pf~~~~~~~~~~~i~~~~ 212 (316)
T cd05592 136 KIADFGMCKENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIG-QSPFHGEDEDELFDSILNDR 212 (316)
T ss_pred EEccCcCCeECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHcCC
Confidence 999999997542222 122334678999999999999999999999999999999995 56999888888888776543
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCHH-HHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFR-TIYQTLW 645 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-eil~~L~ 645 (653)
...+..++.++.+++.+||+.+|.+||++. +++++.+
T Consensus 213 -~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~ 250 (316)
T cd05592 213 -PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPF 250 (316)
T ss_pred -CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcc
Confidence 456677889999999999999999999875 6766643
No 148
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=5.4e-38 Score=319.98 Aligned_cols=253 Identities=37% Similarity=0.760 Sum_probs=216.0
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
..+|++.+.||+|+||.||+|.+. .+..+|+|.++..... ..+|.+|++++++++||||+++++++......
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL------EKRKVAIKTIREGAMS--EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPI 74 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe------CCCeEEEEECCCCCCC--HHHHHHHHHHHHhCCCCCeeeEEEEEccCCce
Confidence 457889999999999999999863 2357999998754322 34688999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++++|.+++.. ....+++..++.++.|++.||+|||+.+++|+||||+||+++.
T Consensus 75 ~~v~e~~~~~~L~~~~~~-------------------~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~ 135 (256)
T cd05112 75 CLVFEFMEHGCLSDYLRA-------------------QRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGE 135 (256)
T ss_pred EEEEEcCCCCcHHHHHHh-------------------CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcC
Confidence 999999999999999862 1235788999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.+||+|||+++...... .........+.+|+|||.+.++.++.++||||||+++|||++.+..||......++.+.+
T Consensus 136 ~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 214 (256)
T cd05112 136 NQVVKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETI 214 (256)
T ss_pred CCeEEECCCcceeecccCc-ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence 9999999999987543221 112223345678999999999999999999999999999999777899888888888888
Q ss_pred HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
..+.....+...+..+.+|+.+||+.+|++|||+.++++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 215 NAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 87755555667889999999999999999999999998876
No 149
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.6e-38 Score=320.81 Aligned_cols=254 Identities=22% Similarity=0.325 Sum_probs=217.9
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|.+.+.||+|+||.||+|+.. .++..|++|.+... .......++.+|++++++++||||+++++++..++..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRK-----ADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEc-----CCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEE
Confidence 4678899999999999999864 35678999988643 23445667999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++++|.++++.. ....+++..++.++.|++.||.|||+.+++|+||||+||+++++
T Consensus 76 lv~e~~~~~~L~~~l~~~------------------~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~ 137 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQ------------------RGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAY 137 (256)
T ss_pred EEEEeCCCCcHHHHHHHh------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCC
Confidence 999999999999999732 12457899999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
+.++|+|||+++....... ......++..|+|||.+.+..++.++||||||+++|||++| ..||...+..+....+.
T Consensus 138 ~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~ 214 (256)
T cd08529 138 DNVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTG-KHPFDANNQGALILKII 214 (256)
T ss_pred CCEEEcccccceeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHH
Confidence 9999999999876533221 12233567889999999999999999999999999999995 55888888888888888
Q ss_pred cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.....+...+.++.+++.+||+.+|++||++.+++++.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 255 (256)
T cd08529 215 RGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPS 255 (256)
T ss_pred cCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCC
Confidence 77776667788899999999999999999999999998753
No 150
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.8e-39 Score=344.44 Aligned_cols=260 Identities=22% Similarity=0.284 Sum_probs=215.1
Q ss_pred cccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEe
Q psy5539 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLG 435 (653)
Q Consensus 358 ~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g 435 (653)
...++..++|++.+.||+|+||.||+|+.. .++..||+|.++... .....+.+.+|+.+++.++||||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~ 110 (370)
T cd05596 36 TKLRMKAEDFDVIKVIGRGAFGEVQLVRHK-----SSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHY 110 (370)
T ss_pred ccCCCCHHHcEEEEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEE
Confidence 344566778999999999999999999864 356789999986432 2223345788999999999999999999
Q ss_pred EEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539 436 VCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515 (653)
Q Consensus 436 ~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk 515 (653)
++..+...++||||+++|+|.++++. ..++...+..++.||+.||+|||+++|+|||||
T Consensus 111 ~~~~~~~~~lv~Ey~~gg~L~~~l~~---------------------~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLk 169 (370)
T cd05596 111 AFQDDKYLYMVMEYMPGGDLVNLMSN---------------------YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVK 169 (370)
T ss_pred EEecCCEEEEEEcCCCCCcHHHHHHh---------------------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence 99999999999999999999999861 236788889999999999999999999999999
Q ss_pred CCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC----CCCCchhHHHHHHHHHHHHhCCCCCC
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN----KYTVESDVWAFGVCLWEIFSFALQPY 591 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~----~~t~ksDVwSlGvvl~ellt~~~~p~ 591 (653)
|+|||+++++.+||+|||++........ .......+++.|||||.+... .++.++||||||+++|||++| .+||
T Consensus 170 p~NILl~~~~~~kL~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG-~~Pf 247 (370)
T cd05596 170 PDNMLLDKSGHLKLADFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG-DTPF 247 (370)
T ss_pred HHHEEEcCCCCEEEEeccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhC-CCCc
Confidence 9999999999999999999976532221 122345688999999998653 478999999999999999995 5699
Q ss_pred CCCCHHHHHHHHHcCC-ccCCCC--CCcHHHHHHHHHhhccCCCC--CCCHHHHHHHHH
Q psy5539 592 YGLTHEEVVKYIKEGN-ILQAPD--NTPDALYDLMKLCWNMKPMN--RPSFRTIYQTLW 645 (653)
Q Consensus 592 ~~~~~~e~~~~i~~~~-~~~~~~--~~~~~l~~li~~cl~~dP~~--RPs~~eil~~L~ 645 (653)
.+.+..+....+..+. ....+. ..+.++.+++.+|+..+|.+ |++++++++|.|
T Consensus 248 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 248 YADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred CCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 8888877777776543 233343 47899999999999999988 999999999875
No 151
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.5e-38 Score=321.36 Aligned_cols=252 Identities=23% Similarity=0.385 Sum_probs=216.3
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
+|++.+.||+|+||.||+++.. .++..+|+|.++........+.+.+|+.+++.++|+||+++++.+..++..++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHV-----NSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEc-----CCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEE
Confidence 4678899999999999999864 35678999998654444456678899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
||||+++|+|.+++... ....++...++.++.|++.||.|||+++++|+||||+||++++++
T Consensus 76 v~e~~~~~~l~~~~~~~------------------~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~ 137 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQ------------------RGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG 137 (255)
T ss_pred EEeeCCCCcHHHHHHhc------------------cCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC
Confidence 99999999999988621 123478889999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~ 605 (653)
.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++|+|++| ..||...+.......+..
T Consensus 138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g-~~p~~~~~~~~~~~~~~~ 214 (255)
T cd08219 138 KVKLGDFGSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTL-KHPFQANSWKNLILKVCQ 214 (255)
T ss_pred cEEEcccCcceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhc-cCCCCCCCHHHHHHHHhc
Confidence 999999999876532221 12234577889999999998999999999999999999995 558988888888888877
Q ss_pred CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy5539 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQT 643 (653)
Q Consensus 606 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 643 (653)
+.....+..++..+.+++.+||+.+|.+||++.+|+..
T Consensus 215 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 215 GSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 77766777889999999999999999999999999764
No 152
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.1e-38 Score=322.87 Aligned_cols=260 Identities=23% Similarity=0.402 Sum_probs=214.4
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccc--cccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD--EASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~--~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++.+.||+|+||.||+|+.. .++..||||.++. .........+.+|+++++.++||||+++++++...+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCL-----LDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEe-----CCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCe
Confidence 57889999999999999999864 3567899998753 2234455678999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++|+||+++|+|.+++.... .....++...++.++.|++.||.|||+++++|+||||+|||++
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~----------------~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~ 140 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFK----------------KQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT 140 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhh----------------hccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc
Confidence 999999999999999986322 1224578899999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC--CHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL--THEEVV 600 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~--~~~e~~ 600 (653)
.++.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++|||++|+. ||... +..++.
T Consensus 141 ~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~-p~~~~~~~~~~~~ 217 (267)
T cd08228 141 ATGVVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS-PFYGDKMNLFSLC 217 (267)
T ss_pred CCCCEEECccccceeccchhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCC-CCccccccHHHHH
Confidence 999999999999876532221 1123456788999999998899999999999999999999666 55433 335566
Q ss_pred HHHHcCCccCCC-CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAP-DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 601 ~~i~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
+.+......+.+ +..+..+.+++.+||+.+|++||++.++++.+..++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 218 QKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 666665443332 457789999999999999999999999999998764
No 153
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=6e-38 Score=319.81 Aligned_cols=254 Identities=35% Similarity=0.659 Sum_probs=213.3
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
+.||+|+||.||+|.+.. .......||||.++........+.+.+|+.++++++||||+++++++.. ...++|+||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWST--SGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEec--CCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 358999999999998743 1233457999999876554566789999999999999999999999888 8899999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++|+|.+++.... ...+++..++.++.|++.||+|||+++++|+||||+||+++.++.+||+
T Consensus 78 ~~~~L~~~l~~~~------------------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~ 139 (257)
T cd05040 78 PLGSLLDRLRKDA------------------LGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIG 139 (257)
T ss_pred CCCcHHHHHHhcc------------------cccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEec
Confidence 9999999997221 1357899999999999999999999999999999999999999999999
Q ss_pred ccCcccccccccc-ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCc
Q psy5539 531 DFGLSRKMYLQDY-YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE-GNI 608 (653)
Q Consensus 531 DfGla~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~-~~~ 608 (653)
|||+++....... +.......++..|+|||.+....++.++||||||+++|||++.|..||...+..++.+.+.. +..
T Consensus 140 dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~ 219 (257)
T cd05040 140 DFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGER 219 (257)
T ss_pred cccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCc
Confidence 9999987643221 11222345677899999999999999999999999999999977779988888877766653 333
Q ss_pred cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 609 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
...+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 220 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 220 LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 4455678899999999999999999999999998774
No 154
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=9.2e-39 Score=343.72 Aligned_cols=254 Identities=22% Similarity=0.311 Sum_probs=210.8
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++.+.||+|+||+||+|+.. .+++.||||+++... .......+.+|+.++..++||||+++++++..++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKK-----DTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCe
Confidence 47889999999999999999864 356789999997532 22334568899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||++
T Consensus 76 ~~lv~E~~~~g~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~ 135 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMK--------------------KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD 135 (364)
T ss_pred EEEEECCCCCcHHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC
Confidence 9999999999999999862 23588999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCcccccccccccc------------------------------------CCCCCCCccccccchhhccCC
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYK------------------------------------GDENDAIPVRWMPLESILYNK 566 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~------------------------------------~~~~~~~t~~y~aPE~~~~~~ 566 (653)
.++.+||+|||+++.+....... ......||+.|||||.+....
T Consensus 136 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 215 (364)
T cd05599 136 AKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG 215 (364)
T ss_pred CCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCC
Confidence 99999999999987542211000 001134789999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-ccCCCC--CCcHHHHHHHHHhhccCCCCCCC---HHHH
Q psy5539 567 YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN-ILQAPD--NTPDALYDLMKLCWNMKPMNRPS---FRTI 640 (653)
Q Consensus 567 ~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~-~~~~~~--~~~~~l~~li~~cl~~dP~~RPs---~~ei 640 (653)
++.++|||||||++|||++| ..||.+.+..+....+.... ....+. .+++++.+++++|+. +|.+|++ ++++
T Consensus 216 ~~~~~DiwSlG~il~el~~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~l 293 (364)
T cd05599 216 YNKECDWWSLGVIMYEMLVG-YPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEI 293 (364)
T ss_pred CCCeeeeecchhHHHHhhcC-CCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHH
Confidence 99999999999999999995 56998888877777665533 223333 468899999999996 8999997 9999
Q ss_pred HHHHH
Q psy5539 641 YQTLW 645 (653)
Q Consensus 641 l~~L~ 645 (653)
+++.|
T Consensus 294 l~h~~ 298 (364)
T cd05599 294 KSHPF 298 (364)
T ss_pred hcCCC
Confidence 99875
No 155
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.2e-38 Score=323.14 Aligned_cols=254 Identities=31% Similarity=0.582 Sum_probs=204.1
Q ss_pred eecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeecC
Q psy5539 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMG 451 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~~ 451 (653)
.||+|+||.||+|+... ......+++|.++........+.+.+|+.+++.++||||+++++.+......++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~---~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYT---DTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEc---CCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 58999999999997532 223456788888766555567789999999999999999999999999999999999999
Q ss_pred CCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEec
Q psy5539 452 RGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIAD 531 (653)
Q Consensus 452 ~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~D 531 (653)
+|+|.++++.... ....++...+..++.||+.||+|||+.+++||||||+|||+++++.+||+|
T Consensus 79 ~~~L~~~l~~~~~----------------~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~D 142 (268)
T cd05086 79 LGDLKSYLSQEQW----------------HRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGD 142 (268)
T ss_pred CCcHHHHHHhhhc----------------ccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecc
Confidence 9999999973211 123456777889999999999999999999999999999999999999999
Q ss_pred cCccccccccccccCCCCCCCccccccchhhcc-------CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-------NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 532 fGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-------~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
||++......+.........++..|+|||.+.. ..++.++||||||+++|||++++.+||...+..+.+..+.
T Consensus 143 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 222 (268)
T cd05086 143 YGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVI 222 (268)
T ss_pred cccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 999864433322223334557789999998753 2457899999999999999998888998888777666554
Q ss_pred cCCcc-----CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EGNIL-----QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+... ..+...++.+.+++..|| .+|++||++++|++.|.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 223 KDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred hhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 33221 223346788999999999 67999999999988763
No 156
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.8e-39 Score=343.08 Aligned_cols=254 Identities=25% Similarity=0.359 Sum_probs=212.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|.+.+.||+|+||+||+|+.. .+++.||||+++... .......+.+|++++..++|+||+++++++..++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDK-----DTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEEC-----CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCe
Confidence 46889999999999999999864 356889999997542 12344578899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||++
T Consensus 76 ~~lv~e~~~~~~L~~~l~~--------------------~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~ 135 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIR--------------------KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID 135 (350)
T ss_pred EEEEEcCCCCCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC
Confidence 9999999999999999862 24578999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccc---------------------------cccCCCCCCCccccccchhhccCCCCCchhHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQD---------------------------YYKGDENDAIPVRWMPLESILYNKYTVESDVWA 575 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~---------------------------~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwS 575 (653)
.++.+||+|||++....... .........+|+.|+|||.+.+..++.++||||
T Consensus 136 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 215 (350)
T cd05573 136 ADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWS 215 (350)
T ss_pred CCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEe
Confidence 99999999999997654322 001123346788999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CccCCC--CCCcHHHHHHHHHhhccCCCCCCC-HHHHHHHHH
Q psy5539 576 FGVCLWEIFSFALQPYYGLTHEEVVKYIKEG-NILQAP--DNTPDALYDLMKLCWNMKPMNRPS-FRTIYQTLW 645 (653)
Q Consensus 576 lGvvl~ellt~~~~p~~~~~~~e~~~~i~~~-~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs-~~eil~~L~ 645 (653)
||+++|||++|. .||.+.+..+....+... .....+ ..+++++.+++.+|+. +|.+||+ ++++++++|
T Consensus 216 lG~il~ell~g~-~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~ 287 (350)
T cd05573 216 LGVILYEMLYGF-PPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287 (350)
T ss_pred cchhhhhhccCC-CCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence 999999999955 588888877776666551 112223 3368999999999997 9999999 999999875
No 157
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=5.7e-38 Score=325.53 Aligned_cols=263 Identities=33% Similarity=0.603 Sum_probs=212.7
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC--Cc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--KP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--~~ 442 (653)
..|++++.||+|+||.||+++... ....++..||+|.++..........+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDP-EGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEcc-CCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 356788999999999999998642 123456889999998665555667899999999999999999999998764 56
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++++|.+++... ...+++..++.++.|++.||+|||+++++||||||+|||++
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~-------------------~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~ 143 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRN-------------------KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE 143 (284)
T ss_pred eEEEEEccCCCCHHHHHHhc-------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc
Confidence 89999999999999998621 23478999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccc-cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCC--------
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG-------- 593 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~-------- 593 (653)
+++.++|+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||+++..+.+..
T Consensus 144 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~ 223 (284)
T cd05079 144 SEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMI 223 (284)
T ss_pred CCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhc
Confidence 9999999999999865332211 1112344567899999999889999999999999999999865422111
Q ss_pred ------CCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 594 ------LTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 594 ------~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
.........+..+...+.+..++..+.+|+.+||+.+|.+||++.++++.+..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 224 GPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 112233444555555556677899999999999999999999999999998865
No 158
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=6e-38 Score=319.06 Aligned_cols=257 Identities=49% Similarity=0.901 Sum_probs=222.1
Q ss_pred eEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEE
Q psy5539 368 IYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 368 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
.+.+.||+|+||.||+++..... ......||+|.++........+.+..|+.++..++|+||+++++++...+..+++|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLS-GEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred cccceeccCCCcceEEEEecCCC-CCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 45678999999999999975321 12347899999987665546678999999999999999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++++|.+++.... ...+++..+..++.|++.||+|||+.+++|+||||+||++++++.+
T Consensus 81 e~~~~~~l~~~~~~~~------------------~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~ 142 (258)
T smart00219 81 EYMEGGDLLDYLRKNR------------------PKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVV 142 (258)
T ss_pred eccCCCCHHHHHHhhh------------------hccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeE
Confidence 9999999999997221 1128999999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
+|+|||+++........... ...++..|+|||.+.+..++.++||||||++++||++++.+||...+..++.+.+..+.
T Consensus 143 ~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~ 221 (258)
T smart00219 143 KISDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY 221 (258)
T ss_pred EEcccCCceecccccccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC
Confidence 99999999876544333222 33467899999999888999999999999999999998888999989899999888888
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
....+...+.++.+++.+||..+|++|||+.++++.|
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 7777788999999999999999999999999998754
No 159
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.9e-38 Score=335.83 Aligned_cols=250 Identities=25% Similarity=0.383 Sum_probs=210.0
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCc
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~ 442 (653)
+|.+.+.||+|+||.||+|+.. .++..||||.++.... ......+..|..++..+ +|++|+++++++...+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERK-----GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCE
Confidence 4788999999999999999864 3557899999875421 22334566788888777 58999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++.. ...+++.++..++.||+.||+|||+++|+||||||+|||++
T Consensus 76 ~~lv~E~~~~g~L~~~~~~--------------------~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~ 135 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQ--------------------VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD 135 (323)
T ss_pred EEEEEcCCCCCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC
Confidence 9999999999999998862 23578899999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||.+.+..++.+.
T Consensus 136 ~~~~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~Pf~~~~~~~~~~~ 212 (323)
T cd05616 136 SEGHIKIADFGMCKENMWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQS 212 (323)
T ss_pred CCCcEEEccCCCceecCCCC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHh-CCCCCCCCCHHHHHHH
Confidence 99999999999987532211 11233457889999999999999999999999999999999 5569999888888888
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCH-----HHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF-----RTIYQTL 644 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~eil~~L 644 (653)
+..... ..|...+.++.+++.+|++.+|++|++. .++.++.
T Consensus 213 i~~~~~-~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~ 258 (323)
T cd05616 213 IMEHNV-AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 258 (323)
T ss_pred HHhCCC-CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCC
Confidence 887653 4667889999999999999999999974 7777664
No 160
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.3e-38 Score=336.58 Aligned_cols=254 Identities=22% Similarity=0.278 Sum_probs=199.0
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC----
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG---- 440 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~---- 440 (653)
+|++.+.||+|+||.||+|+.. .++..||||+++... .......+.+|++++++++||||+++++++...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 75 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDT-----HTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE 75 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEEC-----CCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCC
Confidence 4788899999999999999863 456889999987432 222334688999999999999999999987543
Q ss_pred -CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 441 -KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 441 -~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
...++||||+. ++|.+++.. ...+++..+..++.||++||.|||+++|+||||||+||
T Consensus 76 ~~~~~lv~e~~~-~~L~~~l~~--------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NI 134 (338)
T cd07859 76 FKDIYVVFELME-SDLHQVIKA--------------------NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNI 134 (338)
T ss_pred CceEEEEEecCC-CCHHHHHHh--------------------cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHe
Confidence 24799999995 689998862 23578999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccc-cCCCCCCCccccccchhhcc--CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~--~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
|+++++.+||+|||+++........ .......++..|+|||.+.+ ..++.++||||||+++|||++| .+||.+.+.
T Consensus 135 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg-~~pf~~~~~ 213 (338)
T cd07859 135 LANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGKNV 213 (338)
T ss_pred EECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcC-CCCCCCCCh
Confidence 9999999999999999754322211 11133467889999999875 6789999999999999999995 568876554
Q ss_pred HHHHHHHH---------------------------cCCccC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 597 EEVVKYIK---------------------------EGNILQ---APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 597 ~e~~~~i~---------------------------~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.+....+. ...... .....+..+.+++.+||+.+|++|||+++++++.|-
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f 293 (338)
T cd07859 214 VHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF 293 (338)
T ss_pred HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchh
Confidence 32221111 000000 012456789999999999999999999999999874
No 161
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=9.5e-38 Score=323.53 Aligned_cols=262 Identities=36% Similarity=0.632 Sum_probs=209.0
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec--CC
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV--GK 441 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~--~~ 441 (653)
.++|++.+.||+|+||.||+++..+. ....+..||+|.++... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPL-QDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCC-cCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 35788999999999999999986431 23456789999987543 3345678999999999999999999998754 34
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++|+||+++|+|.+++.. ....+++..++.++.|++.||+|||+++++||||||+|||+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~-------------------~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili 141 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQK-------------------HRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV 141 (284)
T ss_pred ceEEEEEecCCCCHHHHHHh-------------------cCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE
Confidence 68999999999999999862 12357899999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccc-cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC-----
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT----- 595 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~----- 595 (653)
++++.+||+|||+++........ ........+..|+|||.+.+..++.++||||||+++|||+++.. ++....
T Consensus 142 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~-~~~~~~~~~~~ 220 (284)
T cd05081 142 ESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSD-KSCSPPAEFMR 220 (284)
T ss_pred CCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCC-cCCCcchhhhh
Confidence 99999999999999865332211 11122334556999999999999999999999999999999654 322111
Q ss_pred -----------HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 596 -----------HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 596 -----------~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
...+.+.+..+.....+..++.++.+|+.+||+.+|++|||+.+|++.|..+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 221 MMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred hcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 1122333444444455667889999999999999999999999999998765
No 162
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.7e-38 Score=337.31 Aligned_cols=255 Identities=22% Similarity=0.297 Sum_probs=207.6
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc---cHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCC
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA---SEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGK 441 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~---~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~ 441 (653)
+|++.+.||+|+||.||+++... ...++..||+|+++... .....+.+.+|+.++..+ +|+||+++++++...+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVT--GHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcc--cCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC
Confidence 47889999999999999998643 23467899999986532 222345678899999999 5999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||+
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili 138 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQ--------------------RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL 138 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE
Confidence 99999999999999999862 2357889999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCC----CH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGL----TH 596 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~----~~ 596 (653)
++++.+||+|||+++....... .......+|..|||||.+.+. .++.++||||||+++|||++|. .||... ..
T Consensus 139 ~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~-~pf~~~~~~~~~ 216 (332)
T cd05614 139 DSEGHVVLTDFGLSKEFLSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGA-SPFTLEGERNTQ 216 (332)
T ss_pred CCCCCEEEeeCcCCccccccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCC-CCCCCCCCCCCH
Confidence 9999999999999976432221 112234578999999999865 4789999999999999999965 477532 33
Q ss_pred HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW 645 (653)
Q Consensus 597 ~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~ 645 (653)
.++...+.... ...+..++..+.+++.+||+.||++|| ++++++++.|
T Consensus 217 ~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 269 (332)
T cd05614 217 SEVSRRILKCD-PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPF 269 (332)
T ss_pred HHHHHHHhcCC-CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence 44444444433 345667899999999999999999999 8889998875
No 163
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.5e-38 Score=342.75 Aligned_cols=254 Identities=23% Similarity=0.315 Sum_probs=206.1
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.|..++.||+|+||+||+|+.. .++..||||+++... .......+.+|+.++++++|+||+++++++...+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKV-----DTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEE
Confidence 5788999999999999999864 356889999997532 233456789999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+|+||||||+||||+.
T Consensus 77 ~lv~E~~~gg~L~~~l~~--------------------~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~ 136 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIR--------------------MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDL 136 (381)
T ss_pred EEEEecCCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECC
Confidence 999999999999999862 234788889999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccc---ccc------------------------------------------CCCCCCCcccccc
Q psy5539 524 QMVVKIADFGLSRKMYLQD---YYK------------------------------------------GDENDAIPVRWMP 558 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~---~~~------------------------------------------~~~~~~~t~~y~a 558 (653)
++.+||+|||+++...... ... ......||+.|||
T Consensus 137 ~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 216 (381)
T cd05626 137 DGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIA 216 (381)
T ss_pred CCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccC
Confidence 9999999999975321000 000 0012357899999
Q ss_pred chhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CccCCC--CCCcHHHHHHHHHh--hccCCCC
Q psy5539 559 LESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG-NILQAP--DNTPDALYDLMKLC--WNMKPMN 633 (653)
Q Consensus 559 PE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~-~~~~~~--~~~~~~l~~li~~c--l~~dP~~ 633 (653)
||.+.+..++.++|||||||++|||++|. .||...+..+....+... .....+ ..+++++.+|+.++ +..++..
T Consensus 217 PE~~~~~~~~~~~DiwSlG~il~elltG~-~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~ 295 (381)
T cd05626 217 PEVLLRKGYTQLCDWWSVGVILFEMLVGQ-PPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLG 295 (381)
T ss_pred HHHHcCCCCCCccceeehhhHHHHHHhCC-CCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccC
Confidence 99999999999999999999999999955 588877776655555432 222333 35789999999984 4556666
Q ss_pred CCCHHHHHHHHH
Q psy5539 634 RPSFRTIYQTLW 645 (653)
Q Consensus 634 RPs~~eil~~L~ 645 (653)
||+++++++|.|
T Consensus 296 R~~~~~~l~hp~ 307 (381)
T cd05626 296 RNGADDIKAHPF 307 (381)
T ss_pred CCCHHHHhcCcc
Confidence 999999999876
No 164
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.8e-38 Score=335.04 Aligned_cols=246 Identities=23% Similarity=0.351 Sum_probs=204.5
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhh-CCCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAE-FDHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~-l~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+|+.. .++..||+|.++.... ......+..|..++.. ++||||+++++++..++..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELK-----GKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEE
Confidence 36899999999999864 3567899999975421 1223456677777765 48999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||+++++.+
T Consensus 76 E~~~~g~L~~~i~~--------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~ 135 (316)
T cd05620 76 EFLNGGDLMFHIQD--------------------KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHI 135 (316)
T ss_pred CCCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCE
Confidence 99999999998862 2357888999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++...... .......++..|+|||.+.+..++.++||||||+++|||++| ..||.+.+..++.+.+..+.
T Consensus 136 kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g-~~Pf~~~~~~~~~~~~~~~~ 212 (316)
T cd05620 136 KIADFGMCKENVFGD--NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIG-QSPFHGDDEDELFESIRVDT 212 (316)
T ss_pred EeCccCCCeecccCC--CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCC
Confidence 999999986432111 122334578999999999999999999999999999999995 56998888888888877654
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCH-HHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSF-RTIYQTLW 645 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-~eil~~L~ 645 (653)
...+..++.++.+++.+||+.||++||++ +++++|.|
T Consensus 213 -~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~ 250 (316)
T cd05620 213 -PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPF 250 (316)
T ss_pred -CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCC
Confidence 34566788999999999999999999998 47776654
No 165
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=7.6e-39 Score=339.71 Aligned_cols=254 Identities=21% Similarity=0.284 Sum_probs=211.7
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|.+.+.||+|+||+||+|+.. .++..||+|+++.... ....+.+.+|+.+++.++|+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREK-----ATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCe
Confidence 46889999999999999999864 3567899999975432 3345678899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.++++.. ...+++..+..++.||+.||.|||+.+|+||||||+|||++
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~-------------------~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~ 136 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRY-------------------EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID 136 (330)
T ss_pred EEEEECCCCCCCHHHHHHHh-------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC
Confidence 99999999999999999722 24588999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhc------cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL------YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~------~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
.++.+||+|||++......... ......+++.|+|||.+. ...++.++||||||+++|||++|. .||.+.+.
T Consensus 137 ~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~-~Pf~~~~~ 214 (330)
T cd05601 137 RTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGR-SPFHEGTS 214 (330)
T ss_pred CCCCEEeccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCC-CCCCCCCH
Confidence 9999999999999765322211 222346788999999987 456789999999999999999954 58888777
Q ss_pred HHHHHHHHcCC-ccCCCC--CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 597 EEVVKYIKEGN-ILQAPD--NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 597 ~e~~~~i~~~~-~~~~~~--~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+....+.... ....+. .++.++.+|+..|+. +|.+||+++++++|.|
T Consensus 215 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~ 265 (330)
T cd05601 215 AKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPF 265 (330)
T ss_pred HHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCC
Confidence 77777665543 223332 478899999999998 9999999999998875
No 166
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.5e-38 Score=343.87 Aligned_cols=254 Identities=24% Similarity=0.285 Sum_probs=207.8
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|.+++.||+|+||.||+++.. .++..||||.+.... .....+.+.+|++++++++||||+++++++.....
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKK-----DTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCe
Confidence 46889999999999999999864 356789999986432 23344578899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+|+||||||+|||++
T Consensus 76 ~~lv~E~~~gg~L~~~l~~--------------------~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~ 135 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIK--------------------YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID 135 (377)
T ss_pred eEEEEeCCCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC
Confidence 9999999999999999862 23578888999999999999999999999999999999999
Q ss_pred CCCcEEEeccCcccccccccc------------cc---------------------------------CCCCCCCccccc
Q psy5539 523 DQMVVKIADFGLSRKMYLQDY------------YK---------------------------------GDENDAIPVRWM 557 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~------------~~---------------------------------~~~~~~~t~~y~ 557 (653)
.++.+||+|||+++....... .. ......+|+.|+
T Consensus 136 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 215 (377)
T cd05629 136 RGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYI 215 (377)
T ss_pred CCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCcccc
Confidence 999999999999863311000 00 001135788999
Q ss_pred cchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CccCCCC--CCcHHHHHHHHHhhccCCCCC
Q psy5539 558 PLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG-NILQAPD--NTPDALYDLMKLCWNMKPMNR 634 (653)
Q Consensus 558 aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~-~~~~~~~--~~~~~l~~li~~cl~~dP~~R 634 (653)
|||.+.+..++.++|||||||++|||++| .+||.+.+..+....+... .....++ .++.++.+|+.+|+. +|.+|
T Consensus 216 aPE~~~~~~~~~~~DiwSlGvil~elltG-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r 293 (377)
T cd05629 216 APEIFLQQGYGQECDWWSLGAIMFECLIG-WPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENR 293 (377)
T ss_pred CHHHHccCCCCCceeeEecchhhhhhhcC-CCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhc
Confidence 99999999999999999999999999994 5689888877777666542 2233333 478899999999997 66665
Q ss_pred ---CCHHHHHHHHH
Q psy5539 635 ---PSFRTIYQTLW 645 (653)
Q Consensus 635 ---Ps~~eil~~L~ 645 (653)
+++.+++++.|
T Consensus 294 ~~r~~~~~~l~hp~ 307 (377)
T cd05629 294 LGRGGAHEIKSHPF 307 (377)
T ss_pred CCCCCHHHHhcCCC
Confidence 69999999875
No 167
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.2e-39 Score=338.72 Aligned_cols=249 Identities=26% Similarity=0.365 Sum_probs=209.1
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEee
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEY 449 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey 449 (653)
+.||+|+||.||+++... ...++..||+|+++.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKIT--GPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEec--cCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 569999999999997531 234678999999975432 22334577899999999999999999999999999999999
Q ss_pred cCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEE
Q psy5539 450 MGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529 (653)
Q Consensus 450 ~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI 529 (653)
+++|+|.+++.. ...+++..+..++.||+.||+|||+.+|+||||||+|||+++++.+||
T Consensus 80 ~~~~~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL 139 (318)
T cd05582 80 LRGGDLFTRLSK--------------------EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKL 139 (318)
T ss_pred CCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEE
Confidence 999999999862 235789999999999999999999999999999999999999999999
Q ss_pred eccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcc
Q psy5539 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL 609 (653)
Q Consensus 530 ~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~ 609 (653)
+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++| ..||.+.+..+....+.... .
T Consensus 140 ~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg-~~p~~~~~~~~~~~~i~~~~-~ 215 (318)
T cd05582 140 TDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG-SLPFQGKDRKETMTMILKAK-L 215 (318)
T ss_pred eeccCCcccCCCC--CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccC-CCCCCCCCHHHHHHHHHcCC-C
Confidence 9999987543221 112234578899999999998999999999999999999995 55998888888888776654 3
Q ss_pred CCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHHHH
Q psy5539 610 QAPDNTPDALYDLMKLCWNMKPMNRPS-----FRTIYQTLW 645 (653)
Q Consensus 610 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~L~ 645 (653)
..+..++.++.+++++||+.||++||+ +.+++++.|
T Consensus 216 ~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~ 256 (318)
T cd05582 216 GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPF 256 (318)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCC
Confidence 566778999999999999999999999 666776653
No 168
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.3e-38 Score=334.54 Aligned_cols=246 Identities=25% Similarity=0.366 Sum_probs=208.0
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||+||+|+.. .++..||||.++... .......+.+|++++..+ +||||+++++++...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELK-----GTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence 35899999999999864 345789999997542 223345677888998888 7999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+.+|+||||||+|||+++++.+
T Consensus 76 e~~~~~~L~~~~~~--------------------~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~ 135 (318)
T cd05570 76 EYVNGGDLMFHIQR--------------------SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHI 135 (318)
T ss_pred cCCCCCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcE
Confidence 99999999998862 2358899999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++....... ......++..|+|||.+.+..++.++|||||||++|||++| ..||.+.+..++...+....
T Consensus 136 kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G-~~pf~~~~~~~~~~~i~~~~ 212 (318)
T cd05570 136 KIADFGMCKEGILGGV--TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAG-QSPFEGDDEDELFQSILEDE 212 (318)
T ss_pred EecccCCCeecCcCCC--cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhC-CCCCCCCCHHHHHHHHHcCC
Confidence 9999999864321111 11233578899999999999999999999999999999995 55998888888888877665
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCH-----HHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSF-----RTIYQTLW 645 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~eil~~L~ 645 (653)
. ..+..++.++.+|+++||+.||.+||++ .+++++.|
T Consensus 213 ~-~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~ 254 (318)
T cd05570 213 V-RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPF 254 (318)
T ss_pred C-CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCC
Confidence 4 4566789999999999999999999999 99988764
No 169
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.2e-38 Score=334.35 Aligned_cols=246 Identities=26% Similarity=0.385 Sum_probs=204.8
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhh-CCCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAE-FDHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~-l~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+|+.. .++..||||.++.... ......+..|..++.. ++||||+++++++...+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELK-----GTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEE
Confidence 35899999999999864 3567899999975421 2223456677777776 59999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.++++. ...+++.++..++.|++.||+|||+++|+||||||+|||+++++.+
T Consensus 76 ey~~~g~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~ 135 (316)
T cd05619 76 EYLNGGDLMFHIQS--------------------CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHI 135 (316)
T ss_pred eCCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCE
Confidence 99999999999862 2347888999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++...... .......+|..|+|||.+.+..++.++||||||+++|||++|. .||.+.+..++.+.+....
T Consensus 136 kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~-~pf~~~~~~~~~~~i~~~~ 212 (316)
T cd05619 136 KIADFGMCKENMLGD--AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQ-SPFHGHDEEELFQSIRMDN 212 (316)
T ss_pred EEccCCcceECCCCC--CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCC-CCCCCCCHHHHHHHHHhCC
Confidence 999999987432111 1122345788999999999999999999999999999999955 5998888888888877654
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCHH-HHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFR-TIYQTLW 645 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-eil~~L~ 645 (653)
. ..+...+.++.+++.+||+.+|++||++. ++.++.+
T Consensus 213 ~-~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~ 250 (316)
T cd05619 213 P-CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPF 250 (316)
T ss_pred C-CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcc
Confidence 3 45566889999999999999999999997 7777654
No 170
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.2e-38 Score=327.90 Aligned_cols=253 Identities=20% Similarity=0.277 Sum_probs=207.8
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
+|+..+.||+|+||+||++... .++..||+|.+..... ......+.+|+.++++++||||+++++.+..++..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEc-----CCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeE
Confidence 3678899999999999999863 3568999999865322 22234577899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+++||||||+||++++
T Consensus 76 ~lv~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~ 137 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNM------------------GNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDD 137 (285)
T ss_pred EEEEeccCCCcHHHHHHhc------------------CcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC
Confidence 9999999999999988621 1235889999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH----
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV---- 599 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~---- 599 (653)
++.++|+|||++....... ......++..|+|||.+.+..++.++||||||+++|||++| ..||.+......
T Consensus 138 ~~~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g-~~pf~~~~~~~~~~~~ 213 (285)
T cd05605 138 YGHIRISDLGLAVEIPEGE---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEG-KSPFRQRKEKVKREEV 213 (285)
T ss_pred CCCEEEeeCCCceecCCCC---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHC-CCCCCCCchhhHHHHH
Confidence 9999999999987642221 11234578899999999999999999999999999999995 558877655433
Q ss_pred HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHHH
Q psy5539 600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLWN 646 (653)
Q Consensus 600 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~~ 646 (653)
...+... ....+...+..+.+|+.+||+.||.+|| ++++++++.|-
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~ 264 (285)
T cd05605 214 ERRVKED-QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFF 264 (285)
T ss_pred HHHhhhc-ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCc
Confidence 2333322 2344566889999999999999999999 89999988654
No 171
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.8e-38 Score=335.91 Aligned_cols=246 Identities=24% Similarity=0.331 Sum_probs=203.5
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHH-HHhhCCCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREAC-LLAEFDHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~-il~~l~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||+||+|+.. .+++.||+|.+..... ......+.+|.. +++.++||||+++++++...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHK-----ADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEE
Confidence 35899999999999864 3568899999865321 122234445544 567899999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+++|+||||||+|||+++++.+
T Consensus 76 e~~~~g~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~ 135 (323)
T cd05575 76 DYVNGGELFFHLQR--------------------ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHV 135 (323)
T ss_pred cCCCCCCHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcE
Confidence 99999999999862 2357888999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++| ..||.+.+..++.+.+..+.
T Consensus 136 kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g-~~pf~~~~~~~~~~~i~~~~ 212 (323)
T cd05575 136 VLTDFGLCKEGIEHS--KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG-LPPFYSRDTAEMYDNILNKP 212 (323)
T ss_pred EEeccCCCcccccCC--CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcC-CCCCCCCCHHHHHHHHHcCC
Confidence 999999987532211 122334578899999999999999999999999999999995 46998888888888877665
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCH----HHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSF----RTIYQTLW 645 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~eil~~L~ 645 (653)
. ..+...+..+.+++++||+.+|.+||++ .+++++.|
T Consensus 213 ~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~ 253 (323)
T cd05575 213 L-RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVF 253 (323)
T ss_pred C-CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCC
Confidence 3 4556679999999999999999999987 57777654
No 172
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=9.2e-38 Score=319.36 Aligned_cols=255 Identities=24% Similarity=0.337 Sum_probs=209.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc----HHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS----EYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~----~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++|.+.+.||+|+||.||+|... .++..||+|.++.... ....+.+.+|++++++++||||+++++++..+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~-----~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDV-----DTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEc-----CCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC
Confidence 46788899999999999999853 3567899998864321 12335688999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..++|+||+++++|.+++.. ...+++..+..++.|++.||.|||+.+++|+||+|+||+
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~--------------------~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil 136 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKA--------------------YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANIL 136 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHH--------------------hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 999999999999999999862 234788899999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccC-CCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKG-DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
+++++.++|+|||+++.......... .....++..|+|||.+.+..++.++||||||+++|||++|. .||...+..+.
T Consensus 137 v~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~-~p~~~~~~~~~ 215 (263)
T cd06625 137 RDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEK-PPWAEFEAMAA 215 (263)
T ss_pred EcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCC-CCccccchHHH
Confidence 99999999999999875432211111 12344677899999999999999999999999999999965 57876655544
Q ss_pred HHHHH-cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 600 VKYIK-EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 600 ~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
...+. .......+...+..+.+++++||..+|.+|||+.+++++.|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 262 (263)
T cd06625 216 IFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFF 262 (263)
T ss_pred HHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCC
Confidence 43333 33334566778999999999999999999999999998865
No 173
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-37 Score=317.98 Aligned_cols=247 Identities=36% Similarity=0.695 Sum_probs=212.0
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|.+.+.||+|+||.||++.. .+..||+|.++.... ...+.+|+.++++++||||+++++++... ..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-------~~~~~~iK~~~~~~~---~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 74 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-------TGQKVAVKNIKCDVT---AQAFLEETAVMTKLHHKNLVRLLGVILHN-GLY 74 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-------CCCceEEEeecCcch---HHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcE
Confidence 5688999999999999999864 346799999875432 35688999999999999999999998654 479
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++|+|.+++... ....+++..++.++.|++.||.|||+.+++||||||+|||++.+
T Consensus 75 ~v~e~~~~~~L~~~l~~~------------------~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~ 136 (254)
T cd05083 75 IVMELMSKGNLVNFLRTR------------------GRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSED 136 (254)
T ss_pred EEEECCCCCCHHHHHHhc------------------CcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCC
Confidence 999999999999999732 12357889999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
+.+||+|||++..... .......+..|+|||.+.++.++.++||||||+++|||++++.+||...+..+....+.
T Consensus 137 ~~~kl~Dfg~~~~~~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~ 211 (254)
T cd05083 137 GVAKVSDFGLARVGSM-----GVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE 211 (254)
T ss_pred CcEEECCCccceeccc-----cCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh
Confidence 9999999999875321 11223345689999999989999999999999999999997888999988888888887
Q ss_pred cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.....++.++..+.+++.+||+.+|.+||++++|++.|.
T Consensus 212 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 212 KGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 77666666778999999999999999999999999988775
No 174
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6e-38 Score=325.05 Aligned_cols=249 Identities=23% Similarity=0.284 Sum_probs=202.6
Q ss_pred ecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 373 LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
||+|+||+||+++.. .+++.||+|.+..... ....+.+..|+++++.++|+||+++.+++..+...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMR-----ATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEc-----cCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCC
Confidence 699999999999864 3567899999865422 223356788999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++|+|.+++.... .....+++..++.++.||+.||+|||+++|+||||||+|||+++++.+||+
T Consensus 76 ~~g~L~~~~~~~~----------------~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~ 139 (280)
T cd05608 76 NGGDLRYHIYNVD----------------EENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRIS 139 (280)
T ss_pred CCCCHHHHHHhcc----------------ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEe
Confidence 9999998885221 123468999999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHcC
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH----EEVVKYIKEG 606 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~----~e~~~~i~~~ 606 (653)
|||++....... .......++..|+|||.+.+..++.++||||||+++|||++|. .||..... .++...+...
T Consensus 140 dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~-~pf~~~~~~~~~~~~~~~~~~~ 216 (280)
T cd05608 140 DLGLAVELKDGQ--SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAAR-GPFRARGEKVENKELKQRILND 216 (280)
T ss_pred eCccceecCCCC--ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCC-CCCCCCCcchhHHHHHHhhccc
Confidence 999997653222 1122346788999999999999999999999999999999955 57765432 2333333332
Q ss_pred CccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHHH
Q psy5539 607 NILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLWN 646 (653)
Q Consensus 607 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~~ 646 (653)
....+..++..+.+++.+||+.+|++|| +++++++|.|-
T Consensus 217 -~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~ 260 (280)
T cd05608 217 -SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLF 260 (280)
T ss_pred -CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhh
Confidence 2345567899999999999999999999 78999998763
No 175
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.9e-38 Score=340.59 Aligned_cols=262 Identities=21% Similarity=0.283 Sum_probs=214.5
Q ss_pred ccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEE
Q psy5539 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLL 434 (653)
Q Consensus 357 l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~ 434 (653)
+..++...++|++.+.||+|+||.||+|+.. .++..+|+|.++... .......+.+|+.+++.++||||++++
T Consensus 35 ~~~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~ 109 (370)
T cd05621 35 IRKLQMKAEDYDVVKVIGRGAFGEVQLVRHK-----SSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 109 (370)
T ss_pred HHhcCCCHHHCeEEEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEE
Confidence 4455667788999999999999999999864 356789999986421 222345688999999999999999999
Q ss_pred eEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539 435 GVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514 (653)
Q Consensus 435 g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL 514 (653)
+++..++..++||||+++|+|.+++.. ..+++..+..++.||+.||+|||+++|+||||
T Consensus 110 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~---------------------~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDL 168 (370)
T cd05621 110 CAFQDDKYLYMVMEYMPGGDLVNLMSN---------------------YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV 168 (370)
T ss_pred EEEEcCCEEEEEEcCCCCCcHHHHHHh---------------------cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 999999999999999999999999861 23678889999999999999999999999999
Q ss_pred CCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC----CCCCchhHHHHHHHHHHHHhCCCCC
Q psy5539 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN----KYTVESDVWAFGVCLWEIFSFALQP 590 (653)
Q Consensus 515 kp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~----~~t~ksDVwSlGvvl~ellt~~~~p 590 (653)
||+|||+++++.+||+|||++........ .......+|+.|||||.+... .++.++||||||+++|||++| ..|
T Consensus 169 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G-~~P 246 (370)
T cd05621 169 KPDNMLLDKHGHLKLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG-DTP 246 (370)
T ss_pred CHHHEEECCCCCEEEEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhC-CCC
Confidence 99999999999999999999976532221 112345688999999998764 378999999999999999995 568
Q ss_pred CCCCCHHHHHHHHHcCC-ccCCCC--CCcHHHHHHHHHhhccCCCC--CCCHHHHHHHHHH
Q psy5539 591 YYGLTHEEVVKYIKEGN-ILQAPD--NTPDALYDLMKLCWNMKPMN--RPSFRTIYQTLWN 646 (653)
Q Consensus 591 ~~~~~~~e~~~~i~~~~-~~~~~~--~~~~~l~~li~~cl~~dP~~--RPs~~eil~~L~~ 646 (653)
|.+.+..+....+.... ....+. .++..+.+++..|+..++.+ |+++.++++|.|-
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~ 307 (370)
T cd05621 247 FYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFF 307 (370)
T ss_pred CCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCccc
Confidence 88888777777776543 233343 46889999999999865544 8999999999874
No 176
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.4e-38 Score=334.79 Aligned_cols=246 Identities=20% Similarity=0.331 Sum_probs=202.1
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+|+.. .++..||+|.++... .....+.+.+|+.++..+ +||||+++++++......++||
T Consensus 1 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELK-----KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEE
Confidence 35899999999999864 356789999997542 223345688899999998 7999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||+++++.+
T Consensus 76 e~~~~g~L~~~~~~--------------------~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~ 135 (329)
T cd05588 76 EFVSGGDLMFHMQR--------------------QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHI 135 (329)
T ss_pred eCCCCCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCE
Confidence 99999999998852 2458999999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC---------CHHH
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL---------THEE 598 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~---------~~~e 598 (653)
||+|||+++...... .......++..|+|||.+.+..++.++||||||+++|||++|. .||... ..+.
T Consensus 136 kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~-~Pf~~~~~~~~~~~~~~~~ 212 (329)
T cd05588 136 KLTDYGMCKEGIRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR-SPFDIVGMSDNPDQNTEDY 212 (329)
T ss_pred EECcCccccccccCC--CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCC-CCcccccccccccccchHH
Confidence 999999986432111 1122345788999999999999999999999999999999955 577521 1122
Q ss_pred HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC------HHHHHHHHH
Q psy5539 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS------FRTIYQTLW 645 (653)
Q Consensus 599 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~eil~~L~ 645 (653)
+.+.+..+. ...|..++.++.+++++||+.+|.+||+ ++++++|.|
T Consensus 213 ~~~~~~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~ 264 (329)
T cd05588 213 LFQVILEKQ-IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPF 264 (329)
T ss_pred HHHHHHcCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCC
Confidence 444444443 4567788999999999999999999987 789988865
No 177
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=6.8e-38 Score=331.64 Aligned_cols=250 Identities=25% Similarity=0.388 Sum_probs=209.0
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCC-CCccceEEeEEecCCc
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFD-HPNIVKLLGVCAVGKP 442 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~~ 442 (653)
+|++.+.||+|+||+||+|+.. .++..||+|.++... .....+.+..|+.++..+. |++|+++++++...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERK-----GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCE
Confidence 4678899999999999999864 356789999987542 1223445778888888886 5778889999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++.. ...+++.+++.++.||+.||+|||+++|+||||||+|||++
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~--------------------~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~ 135 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQ--------------------VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD 135 (323)
T ss_pred EEEEEcCCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC
Confidence 9999999999999999862 24588999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||+++...... .......++..|+|||.+.+..++.++||||||+++|||++| ..||.+.+..++.+.
T Consensus 136 ~~~~ikL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG-~~pf~~~~~~~~~~~ 212 (323)
T cd05615 136 SEGHIKIADFGMCKEHMVDG--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG-QPPFDGEDEDELFQS 212 (323)
T ss_pred CCCCEEEeccccccccCCCC--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhC-CCCCCCCCHHHHHHH
Confidence 99999999999987532211 112334578999999999999999999999999999999994 569999888888888
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS-----FRTIYQTL 644 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~L 644 (653)
+..... ..+...+.++.+++.+||+.+|.+|++ .+++.++.
T Consensus 213 i~~~~~-~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~ 258 (323)
T cd05615 213 IMEHNV-SYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHA 258 (323)
T ss_pred HHhCCC-CCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCc
Confidence 877653 566778999999999999999999997 46676664
No 178
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.3e-38 Score=340.96 Aligned_cols=253 Identities=23% Similarity=0.313 Sum_probs=206.2
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.|..++.||+|+||.||+|+.. .+++.||+|.+.... .......+.+|+.+++.++|+||+++++.+..++..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKV-----DTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEEC-----CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEE
Confidence 5788999999999999999864 356789999987532 233455788999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||++.
T Consensus 77 ~lv~E~~~gg~L~~~l~~--------------------~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~ 136 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIR--------------------MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 136 (382)
T ss_pred EEEEeCCCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence 999999999999999862 234788889999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccc---cc------------------------------------------cCCCCCCCcccccc
Q psy5539 524 QMVVKIADFGLSRKMYLQD---YY------------------------------------------KGDENDAIPVRWMP 558 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~---~~------------------------------------------~~~~~~~~t~~y~a 558 (653)
++.+||+|||+++...... .. .......+|+.|||
T Consensus 137 ~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 216 (382)
T cd05625 137 DGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIA 216 (382)
T ss_pred CCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCC
Confidence 9999999999975321000 00 00012357889999
Q ss_pred chhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-ccCCC--CCCcHHHHHHHHHhhccCCCCCC
Q psy5539 559 LESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN-ILQAP--DNTPDALYDLMKLCWNMKPMNRP 635 (653)
Q Consensus 559 PE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~-~~~~~--~~~~~~l~~li~~cl~~dP~~RP 635 (653)
||.+.+..++.++|||||||++|||++ |.+||.+.+..+....+.... ....| ...++++.+++.+++ .+|.+|+
T Consensus 217 PE~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~ 294 (382)
T cd05625 217 PEVLLRTGYTQLCDWWSVGVILYEMLV-GQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRL 294 (382)
T ss_pred HHHhcCCCCCCeeeEEechHHHHHHHh-CCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcC
Confidence 999999999999999999999999999 556998887776665554422 22222 357889999999876 5999999
Q ss_pred C---HHHHHHHHH
Q psy5539 636 S---FRTIYQTLW 645 (653)
Q Consensus 636 s---~~eil~~L~ 645 (653)
+ +.++++|.|
T Consensus 295 ~~~~~~ei~~hp~ 307 (382)
T cd05625 295 GKNGADEIKAHPF 307 (382)
T ss_pred CCCCHHHHhcCCC
Confidence 7 999998865
No 179
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.2e-37 Score=315.49 Aligned_cols=254 Identities=24% Similarity=0.335 Sum_probs=218.3
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|+..+.||+|+||.||.++.. .++..+++|.+... .......++.+|++++++++|+||+++++++...+..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRT-----EDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEc-----CCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEE
Confidence 4788999999999999999853 45678999987643 23445667899999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
++|||+++|+|.+++... ....+++.++..++.|++.||.|||+.+++|+||+|+||+++++
T Consensus 76 ~~~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~ 137 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQ------------------KGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKA 137 (256)
T ss_pred EEEEecCCCcHHHHHHhc------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCC
Confidence 999999999999999622 12457899999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
+.+||+|||++........ ......++..|+|||.+.+..++.++||||||+++|||++|. .||...+..+....+.
T Consensus 138 ~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~-~~~~~~~~~~~~~~~~ 214 (256)
T cd08221 138 GLIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLK-RTFDATNPLNLVVKIV 214 (256)
T ss_pred CCEEECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCC-CCCCCCCHHHHHHHHH
Confidence 9999999999876533221 223345688999999999888999999999999999999965 5888888888888888
Q ss_pred cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.....+...+.++.+++.+||+.+|.+||++++++++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~ 255 (256)
T cd08221 215 QGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPL 255 (256)
T ss_pred cCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcC
Confidence 87776666778999999999999999999999999998764
No 180
>KOG0589|consensus
Probab=100.00 E-value=9.1e-39 Score=336.70 Aligned_cols=256 Identities=24% Similarity=0.385 Sum_probs=227.5
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc-
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP- 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~- 442 (653)
++|..++.+|+|+||.+++++.+ .+.+.+++|.+.-. ..+..+.....|+.++++++|||||.+.+.|..++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk-----~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~ 78 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHK-----SDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQL 78 (426)
T ss_pred chhhhhhhcCccccchhhhhhhc-----cCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCce
Confidence 56888999999999999998854 45678999988643 334455578999999999999999999999998888
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.+|||+|++||+|.+.+... +...++++.+..++.|++.|+.|||+++|+|||||+.||+++
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~------------------k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt 140 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQ------------------KGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT 140 (426)
T ss_pred EEEEEeecCCCCHHHHHHHH------------------hhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc
Confidence 99999999999999999732 234589999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
.+..|||+|||+|+.+...+ .......||+.||.||.+.+..|..|+|||||||++|||++- .++|.+.+...++..
T Consensus 141 k~~~VkLgDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~l-k~aF~a~~m~~Li~k 217 (426)
T KOG0589|consen 141 KDKKVKLGDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTL-KPAFKASNMSELILK 217 (426)
T ss_pred ccCceeecchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhc-ccccCccchHHHHHH
Confidence 99999999999999886554 233456889999999999999999999999999999999984 469999999999999
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
|..+...+.|...+.+++.+|+.|+..+|..||++.+++.++..
T Consensus 218 i~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l 261 (426)
T KOG0589|consen 218 INRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHL 261 (426)
T ss_pred HhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhh
Confidence 99998888999999999999999999999999999999987543
No 181
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.6e-38 Score=341.88 Aligned_cols=254 Identities=21% Similarity=0.275 Sum_probs=207.3
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++++.||+|+||.||+|+.. .+++.||||.+.... .......+.+|++++++++|+||+++++.+..++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKV-----DTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC-----CCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCE
Confidence 36889999999999999999864 356889999986432 12234568899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||++
T Consensus 76 ~~lv~E~~~~g~L~~~i~~--------------------~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~ 135 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIR--------------------LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID 135 (376)
T ss_pred EEEEEeCCCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC
Confidence 9999999999999999862 23578888899999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccc---c--------------------------------------ccCCCCCCCccccccchh
Q psy5539 523 DQMVVKIADFGLSRKMYLQD---Y--------------------------------------YKGDENDAIPVRWMPLES 561 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~---~--------------------------------------~~~~~~~~~t~~y~aPE~ 561 (653)
.++.+||+|||++..+.... . ........||..|||||.
T Consensus 136 ~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 215 (376)
T cd05598 136 RDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEV 215 (376)
T ss_pred CCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHH
Confidence 99999999999975321000 0 000112357889999999
Q ss_pred hccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc-cCC--CCCCcHHHHHHHHHhhccCCCCCC---
Q psy5539 562 ILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI-LQA--PDNTPDALYDLMKLCWNMKPMNRP--- 635 (653)
Q Consensus 562 ~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~-~~~--~~~~~~~l~~li~~cl~~dP~~RP--- 635 (653)
+.+..++.++|||||||++|||++| ..||.+.+..+....+..... ... ...++.++.+++.+|+ .+|.+|+
T Consensus 216 ~~~~~~~~~~DiwSlGvilyell~G-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~ 293 (376)
T cd05598 216 LLRTGYTQLCDWWSVGVILYEMLVG-QPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKN 293 (376)
T ss_pred HcCCCCCcceeeeeccceeeehhhC-CCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCC
Confidence 9999999999999999999999995 559988887776666554321 222 2357889999999976 5999999
Q ss_pred CHHHHHHHHH
Q psy5539 636 SFRTIYQTLW 645 (653)
Q Consensus 636 s~~eil~~L~ 645 (653)
++.++++|.|
T Consensus 294 t~~ell~h~~ 303 (376)
T cd05598 294 GADEIKAHPF 303 (376)
T ss_pred CHHHHhCCCC
Confidence 9999999876
No 182
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=7e-38 Score=337.87 Aligned_cols=262 Identities=21% Similarity=0.293 Sum_probs=214.4
Q ss_pred ccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEE
Q psy5539 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLL 434 (653)
Q Consensus 357 l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~ 434 (653)
+...++..++|++.+.||+|+||.||+|+.. .++..+|+|.++... .......+.+|+.+++.++||||++++
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~-----~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~ 109 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHK-----STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 109 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEEC-----CCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 3445677789999999999999999999864 356789999986422 223345678999999999999999999
Q ss_pred eEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539 435 GVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514 (653)
Q Consensus 435 g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL 514 (653)
+.+..+...++||||+++|+|.++++. ..++...+..++.||+.||+|||+++|+||||
T Consensus 110 ~~~~~~~~~~lv~Ey~~gg~L~~~~~~---------------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDL 168 (371)
T cd05622 110 YAFQDDRYLYMVMEYMPGGDLVNLMSN---------------------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 168 (371)
T ss_pred EEEEcCCEEEEEEcCCCCCcHHHHHHh---------------------cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCC
Confidence 999999999999999999999999861 23678888999999999999999999999999
Q ss_pred CCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC----CCCCchhHHHHHHHHHHHHhCCCCC
Q psy5539 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN----KYTVESDVWAFGVCLWEIFSFALQP 590 (653)
Q Consensus 515 kp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~----~~t~ksDVwSlGvvl~ellt~~~~p 590 (653)
||+|||+++++.+||+|||+++....... .......+|+.|||||.+... .++.++||||||+++|||++| ..|
T Consensus 169 kp~NIll~~~~~ikL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G-~~P 246 (371)
T cd05622 169 KPDNMLLDKSGHLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG-DTP 246 (371)
T ss_pred CHHHEEECCCCCEEEEeCCceeEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhC-CCC
Confidence 99999999999999999999976532221 122345688999999998754 378999999999999999994 569
Q ss_pred CCCCCHHHHHHHHHcCC-ccCCC--CCCcHHHHHHHHHhhccCCCC--CCCHHHHHHHHHH
Q psy5539 591 YYGLTHEEVVKYIKEGN-ILQAP--DNTPDALYDLMKLCWNMKPMN--RPSFRTIYQTLWN 646 (653)
Q Consensus 591 ~~~~~~~e~~~~i~~~~-~~~~~--~~~~~~l~~li~~cl~~dP~~--RPs~~eil~~L~~ 646 (653)
|.+.+.......+.... ....+ ..++..+.+++..|+...+.+ |+++++|++|+|-
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~ 307 (371)
T cd05622 247 FYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 307 (371)
T ss_pred CCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence 98888877777776543 22333 358899999999999854443 7899999998753
No 183
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.8e-37 Score=315.34 Aligned_cols=260 Identities=24% Similarity=0.411 Sum_probs=217.1
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccc--cccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD--EASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~--~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++.+.||+|+||.||+|... .+++.||+|.++. .......+.+.+|++++++++|+||+++++++...+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICL-----LDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEc-----CCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCe
Confidence 57899999999999999999864 3567899998863 2233446678999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++.... .....+++..++.++.|++.||.|||+.+++|+||+|+||+++
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~ 140 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFK----------------KQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT 140 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhc----------------ccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC
Confidence 999999999999999986322 1234578999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC--CHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL--THEEVV 600 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~--~~~e~~ 600 (653)
+++.++|+|||+++...... .......++..|+|||.+.+..++.++||||||+++|+|++|.. ||... +..++.
T Consensus 141 ~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~-p~~~~~~~~~~~~ 217 (267)
T cd08224 141 ATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS-PFYGDKMNLYSLC 217 (267)
T ss_pred CCCcEEEeccceeeeccCCC--cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCC-CcccCCccHHHHH
Confidence 99999999999987543221 11223456778999999999999999999999999999999665 66443 345666
Q ss_pred HHHHcCCccCCCC-CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPD-NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 601 ~~i~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
+.+..+...+.+. ..+..+.+++.+||+.+|++||++.+|++.+..++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 218 KKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred hhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 7777666655555 67889999999999999999999999999998775
No 184
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=9.5e-38 Score=328.13 Aligned_cols=254 Identities=27% Similarity=0.433 Sum_probs=204.5
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|.+.+.||+|+||.||+|+.. .++..||+|.++..........+.+|+.++++++||||+++++++..++..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSK-----LTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEec-----CCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEE
Confidence 57899999999999999999864 3457899999875443333446788999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++ +|.+++... ...+++..+..++.||+.||+|||+++|+||||||+|||++++
T Consensus 81 lv~e~~~~-~l~~~~~~~-------------------~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~ 140 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDC-------------------GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINER 140 (309)
T ss_pred EEEeCCCC-CHHHHHHhc-------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 99999975 888887521 2347888999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
+.+||+|||+++...... .......++..|+|||.+.+ ..++.++||||||+++|||++| .+||.+.+..+....+
T Consensus 141 ~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg-~~pf~~~~~~~~~~~~ 217 (309)
T cd07872 141 GELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASG-RPLFPGSTVEDELHLI 217 (309)
T ss_pred CCEEECccccceecCCCc--cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHH
Confidence 999999999987542221 11223456789999998865 4689999999999999999995 4688777665544333
Q ss_pred HcC---------------------Ccc--------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 604 KEG---------------------NIL--------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 604 ~~~---------------------~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
... ... .....++.++.+++++|++.||.+|||+++++++.|-
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~ 289 (309)
T cd07872 218 FRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYF 289 (309)
T ss_pred HHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhh
Confidence 210 000 0112467889999999999999999999999998874
No 185
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.6e-38 Score=338.79 Aligned_cols=251 Identities=21% Similarity=0.285 Sum_probs=198.7
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+..++|.+.+.||+|+||.||+|.+. .++..||+|.... ..+.+|++++++++|||||++++++..+.
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~-----~~~~~vaiK~~~~-------~~~~~E~~il~~l~HpnIv~~~~~~~~~~ 156 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDN-----KTCEHVVIKAGQR-------GGTATEAHILRAINHPSIIQLKGTFTYNK 156 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEEC-----CCCCEEEEechhh-------hhhHHHHHHHHhCCCCCCCCEeEEEEECC
Confidence 45578999999999999999999864 4567899997532 34678999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++|+|++. ++|.+++.. ...+++.+++.++.||+.||+|||+++|+||||||+|||+
T Consensus 157 ~~~lv~e~~~-~~L~~~l~~--------------------~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll 215 (391)
T PHA03212 157 FTCLILPRYK-TDLYCYLAA--------------------KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI 215 (391)
T ss_pred eeEEEEecCC-CCHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE
Confidence 9999999985 689888852 2357889999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC------
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT------ 595 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~------ 595 (653)
+.++.+||+|||+++...... ........+|+.|+|||++.+..++.++||||||+++|||++|..++|....
T Consensus 216 ~~~~~vkL~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~ 294 (391)
T PHA03212 216 NHPGDVCLGDFGAACFPVDIN-ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCD 294 (391)
T ss_pred cCCCCEEEEeCCccccccccc-ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCc
Confidence 999999999999996432111 1112234689999999999999999999999999999999997765443211
Q ss_pred HHHHHHHHH--------------------------cCCcc---CCC-----CCCcHHHHHHHHHhhccCCCCCCCHHHHH
Q psy5539 596 HEEVVKYIK--------------------------EGNIL---QAP-----DNTPDALYDLMKLCWNMKPMNRPSFRTIY 641 (653)
Q Consensus 596 ~~e~~~~i~--------------------------~~~~~---~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil 641 (653)
....+..+. ..... ..+ ...+.++.+|+.+||+.||.+|||+++++
T Consensus 295 ~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL 374 (391)
T PHA03212 295 SDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALL 374 (391)
T ss_pred hhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHh
Confidence 111111110 00000 000 12456899999999999999999999999
Q ss_pred HHHHH
Q psy5539 642 QTLWN 646 (653)
Q Consensus 642 ~~L~~ 646 (653)
++.|-
T Consensus 375 ~hp~f 379 (391)
T PHA03212 375 DFAAF 379 (391)
T ss_pred cChhh
Confidence 98874
No 186
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.7e-37 Score=320.66 Aligned_cols=245 Identities=26% Similarity=0.421 Sum_probs=197.4
Q ss_pred eecccCCeeEEEEEeCCC-------------------CCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccce
Q psy5539 372 DLGQGAFGRVFQAKAPGL-------------------LKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVK 432 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~-------------------~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~ 432 (653)
.||+|+||.||+|..... ........|++|.+..... .....|.+|+.+++.++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeee
Confidence 589999999999975210 0112235699999875433 34457889999999999999999
Q ss_pred EEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceec
Q psy5539 433 LLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHR 512 (653)
Q Consensus 433 l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHr 512 (653)
+++++..+...++||||+++|+|..+++. ....+++..++.++.||++||+|||+++|+||
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-------------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~ 141 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRK-------------------EKGRVPVAWKITVAQQLASALSYLEDKNLVHG 141 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 99999999999999999999999999862 22457889999999999999999999999999
Q ss_pred CCCCCCEeEcCCC-------cEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHH
Q psy5539 513 DLATRNCLINDQM-------VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIF 584 (653)
Q Consensus 513 DLkp~NILl~~~~-------~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ell 584 (653)
||||+|||+++.+ .+|++|||++..... .....++..|+|||.+.. ..++.++||||||+++|||+
T Consensus 142 dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~ 215 (274)
T cd05076 142 NVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEIC 215 (274)
T ss_pred CCCcccEEEeccCcccCccceeeecCCcccccccc------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999997654 489999999864321 122346678999998875 56899999999999999997
Q ss_pred hCCCCCCCCCCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 585 SFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 585 t~~~~p~~~~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
..+..||.+....+....+.... ..+.....++.+++.+||+.+|++||++.+|++.|
T Consensus 216 ~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 216 FDGEVPLKERTPSEKERFYEKKH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred hCCCCCccccChHHHHHHHHhcc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 66777998777666555444322 33445567899999999999999999999999876
No 187
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.1e-37 Score=317.72 Aligned_cols=246 Identities=26% Similarity=0.428 Sum_probs=197.2
Q ss_pred eeecccCCeeEEEEEeCCCC-------CCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 371 RDLGQGAFGRVFQAKAPGLL-------KHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~-------~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
+.||+|+||.||+|+..... .......|++|.+.... ......|.+|+.+++.++||||+++++++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 35899999999999853211 01223468999887543 33456788999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++|+|..++.. ....+++..+++++.||++||+|||+++|+||||||+|||++.
T Consensus 80 ~lv~e~~~~~~l~~~~~~-------------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~ 140 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHR-------------------KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAR 140 (262)
T ss_pred EEEEecccCCCHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEec
Confidence 999999999999998862 1245789999999999999999999999999999999999987
Q ss_pred CCc-------EEEeccCccccccccccccCCCCCCCccccccchhhc-cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 524 QMV-------VKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-YNKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 524 ~~~-------vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
++. ++++|||++..... .....++..|+|||.+. +..++.++||||||+++|||++++..|+....
T Consensus 141 ~~~~~~~~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 214 (262)
T cd05077 141 EGIDGECGPFIKLSDPGIPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT 214 (262)
T ss_pred CCccCCCCceeEeCCCCCCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 664 89999999865421 22345677899999887 46789999999999999999976777887766
Q ss_pred HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 596 ~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
..+..... .+.. ......+.++.+||.+||+.+|.+||++.+|++++
T Consensus 215 ~~~~~~~~-~~~~-~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 215 LAEKERFY-EGQC-MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hhHHHHHH-hcCc-cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 55543322 2222 22334567899999999999999999999998875
No 188
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.6e-37 Score=314.91 Aligned_cols=254 Identities=25% Similarity=0.408 Sum_probs=213.9
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEec-CCce
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAV-GKPM 443 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~-~~~~ 443 (653)
+|++.+.||+|++|.||+++.. .+++.||+|.+.... .....+.+.+|++++++++|+|++++++.+.. ....
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHR-----TDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLL 75 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEc-----CCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEE
Confidence 4788999999999999999864 345789999986432 33445678899999999999999999988764 4467
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
+++|||+++++|.++++.. ....+++.+++.++.|++.||++||+.+++|+||||+||++++
T Consensus 76 ~lv~e~~~~~~l~~~l~~~------------------~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~ 137 (257)
T cd08223 76 YIVMGFCEGGDLYHKLKEQ------------------KGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTR 137 (257)
T ss_pred EEEecccCCCcHHHHHHHh------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEec
Confidence 8999999999999999721 1245789999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.++|+|||++....... .......+++.|+|||.+.+..++.++||||||++++||++|. .||...+..+....+
T Consensus 138 ~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~-~~~~~~~~~~~~~~~ 214 (257)
T cd08223 138 TNIIKVGDLGIARVLENQC--DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLK-HAFNAKDMNSLVYRI 214 (257)
T ss_pred CCcEEEecccceEEecccC--CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCC-CCCCCCCHHHHHHHH
Confidence 9999999999997653222 1222345678899999999999999999999999999999965 588887777777777
Q ss_pred HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..+.....+...+.++.+++.+||+.+|++||++.+++++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 256 (257)
T cd08223 215 IEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPY 256 (257)
T ss_pred HhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 777665667778999999999999999999999999998764
No 189
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.4e-38 Score=333.30 Aligned_cols=246 Identities=20% Similarity=0.326 Sum_probs=201.0
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+|+.. .++..||+|.++... .......+.+|+.++.++ +||||+++++++..++..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLK-----KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEE
Confidence 36899999999999864 356789999987542 223345678888888876 8999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||++.++.+
T Consensus 76 E~~~~~~L~~~~~~--------------------~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~ 135 (329)
T cd05618 76 EYVNGGDLMFHMQR--------------------QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI 135 (329)
T ss_pred eCCCCCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCE
Confidence 99999999988852 2458899999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCC---------CCHHH
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG---------LTHEE 598 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~---------~~~~e 598 (653)
||+|||+++...... .......+|..|+|||.+.+..++.++||||||+++|||++|. .||.. .....
T Consensus 136 kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~-~Pf~~~~~~~~~~~~~~~~ 212 (329)
T cd05618 136 KLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR-SPFDIVGSSDNPDQNTEDY 212 (329)
T ss_pred EEeeCCccccccCCC--CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCC-CCCccCCCcCCcccccHHH
Confidence 999999987532111 1123346789999999999999999999999999999999965 57742 11223
Q ss_pred HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC------HHHHHHHHH
Q psy5539 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS------FRTIYQTLW 645 (653)
Q Consensus 599 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~eil~~L~ 645 (653)
+.+.+... ....|...+..+.+++++||+.||.+||+ +.++++|.|
T Consensus 213 ~~~~i~~~-~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~ 264 (329)
T cd05618 213 LFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF 264 (329)
T ss_pred HHHHHhcC-CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCC
Confidence 44444443 34567788999999999999999999998 578888764
No 190
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.4e-37 Score=319.74 Aligned_cols=262 Identities=37% Similarity=0.691 Sum_probs=213.7
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec--CCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV--GKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~--~~~ 442 (653)
.+|.+.+.||+|+||.||+|+.... ....+..+|||.++........+.|.+|+++++.++|+||+++++++.. +..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPL-GDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCC-CCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 4677889999999999999986431 1345789999999866544456789999999999999999999999877 567
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++++|.+++... ...+++..++.++.|++.||+|||+.+++|+||||+||+++
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~-------------------~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~ 143 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRH-------------------RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE 143 (284)
T ss_pred eEEEEecCCCCCHHHHHHhC-------------------ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc
Confidence 89999999999999999621 12588999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccc-cccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC------
Q psy5539 523 DQMVVKIADFGLSRKMYLQD-YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT------ 595 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~------ 595 (653)
.++.++|+|||++....... ..........+..|+|||.+....++.++||||||+++|||++|.. |+....
T Consensus 144 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~-p~~~~~~~~~~~ 222 (284)
T cd05038 144 SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD-PSQSPPAEFLRM 222 (284)
T ss_pred CCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC-Ccccccchhccc
Confidence 99999999999998664221 1122223345667999999998999999999999999999999765 443321
Q ss_pred ---------HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 596 ---------HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 596 ---------~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
...+.+.+..+.....+..++.++.+++.+||+.+|.+|||+.+|++.|..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 223 IGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 2233444455554555667889999999999999999999999999998765
No 191
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.3e-38 Score=332.67 Aligned_cols=245 Identities=23% Similarity=0.342 Sum_probs=200.4
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHH-HHHhhCCCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREA-CLLAEFDHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei-~il~~l~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+|+.. .++..||+|++..... ......+..|. .+++.++||||+++++++...+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHK-----AEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEE
Confidence 35899999999999864 3557899999875321 12223344444 4578899999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||+++++.+
T Consensus 76 e~~~~~~L~~~~~~--------------------~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~ 135 (325)
T cd05602 76 DYINGGELFYHLQR--------------------ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHI 135 (325)
T ss_pred eCCCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCE
Confidence 99999999999862 2346788888999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++...... .......+++.|||||.+.+..++.++||||||+++|||++| ..||.+.+..+..+.+....
T Consensus 136 kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~ 212 (325)
T cd05602 136 VLTDFGLCKENIEHN--GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG-LPPFYSRNTAEMYDNILNKP 212 (325)
T ss_pred EEccCCCCcccccCC--CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcC-CCCCCCCCHHHHHHHHHhCC
Confidence 999999987532211 122334578999999999999999999999999999999995 46898888888887776654
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCHH----HHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFR----TIYQTL 644 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~----eil~~L 644 (653)
. ..+..++..+.+++.+|++.+|.+||++. ++.+++
T Consensus 213 ~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~ 252 (325)
T cd05602 213 L-QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHI 252 (325)
T ss_pred c-CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCc
Confidence 3 45567899999999999999999999876 555554
No 192
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.4e-37 Score=315.28 Aligned_cols=244 Identities=29% Similarity=0.493 Sum_probs=198.8
Q ss_pred eeecccCCeeEEEEEeCCCCC-----CccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLK-----HEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~-----~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
+.||+|+||.||+|.+..... ......+++|.++..... ...|.+|+.+++.++||||+++++++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence 358999999999999854220 122246888887654332 5678999999999999999999999888 77899
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
||||+++|+|.++++.. ...+++..++.++.||+.||+|||+++|+||||||+|||++.++
T Consensus 78 v~e~~~~~~L~~~l~~~-------------------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~ 138 (259)
T cd05037 78 VEEYVKFGPLDVFLHRE-------------------KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYG 138 (259)
T ss_pred EEEcCCCCcHHHHHHhh-------------------ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCc
Confidence 99999999999999721 12578899999999999999999999999999999999999887
Q ss_pred -------cEEEeccCccccccccccccCCCCCCCccccccchhhccC--CCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 526 -------VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 526 -------~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
.+||+|||++..... .....++..|+|||++... .++.++||||||+++|||++++..|+...+.
T Consensus 139 ~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~ 212 (259)
T cd05037 139 LNEGYVPFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS 212 (259)
T ss_pred cccCCceeEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc
Confidence 899999999976532 2233455679999999877 7899999999999999999987888877765
Q ss_pred HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 597 ~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
.+........... +......+.+++.+||..+|.+|||+.+|++.|
T Consensus 213 ~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 213 SEKERFYQDQHRL--PMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred hhHHHHHhcCCCC--CCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 5555444443322 223347899999999999999999999998876
No 193
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.3e-38 Score=333.35 Aligned_cols=245 Identities=23% Similarity=0.318 Sum_probs=202.6
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHH-HHhhCCCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREAC-LLAEFDHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~-il~~l~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+|+.. .++..+|+|++.... .......+.+|.. +++.++||||+++++++..++..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRK-----LDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEE
Confidence 35899999999999863 456889999986542 1223344555554 577799999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++. ....+++..+..++.||+.||+|||+.+|+||||||+|||+++++.+
T Consensus 76 e~~~~~~L~~~l~--------------------~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~ 135 (325)
T cd05604 76 DFVNGGELFFHLQ--------------------RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHV 135 (325)
T ss_pred cCCCCCCHHHHHH--------------------HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCE
Confidence 9999999998886 22457899999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++...... .......++..|||||.+.+..++.++||||||+++|||++| ..||...+..++.+.+..+.
T Consensus 136 kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G-~~pf~~~~~~~~~~~~~~~~ 212 (325)
T cd05604 136 VLTDFGLCKEGIAQS--DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG-LPPFYCRDVAEMYDNILHKP 212 (325)
T ss_pred EEeecCCcccCCCCC--CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcC-CCCCCCCCHHHHHHHHHcCC
Confidence 999999987532211 122334578899999999999999999999999999999995 46898888888888877765
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCHH----HHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSFR----TIYQTL 644 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~----eil~~L 644 (653)
. ..+...+..+.+++++|++.+|.+||++. +++++.
T Consensus 213 ~-~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~ 252 (325)
T cd05604 213 L-VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHP 252 (325)
T ss_pred c-cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCC
Confidence 3 34456889999999999999999999764 666654
No 194
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.5e-37 Score=323.87 Aligned_cols=254 Identities=23% Similarity=0.357 Sum_probs=208.0
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|++.+.||+|+||.||+++.. .++..+|+|.++..........+.+|++++.+++||||+++++.+..++..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHR-----PSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEc-----CCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEE
Confidence 46889999999999999999864 3557899999876655556677899999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCCEeEcC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVHRDLATRNCLIND 523 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivHrDLkp~NILl~~ 523 (653)
+||||+++++|.++++. ...+++..+..++.||++||.|||+ .+++|+||||+|||+++
T Consensus 76 lv~ey~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~ 135 (308)
T cd06615 76 ICMEHMDGGSLDQVLKK--------------------AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS 135 (308)
T ss_pred EEeeccCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec
Confidence 99999999999999962 2457888999999999999999997 59999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.+||+|||++...... ......++..|+|||.+.+..++.++||||||+++|||++|.. ||...+..+....+
T Consensus 136 ~~~~~l~dfg~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~-p~~~~~~~~~~~~~ 210 (308)
T cd06615 136 RGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRY-PIPPPDAKELEAMF 210 (308)
T ss_pred CCcEEEccCCCccccccc----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCC-CCCCcchhhHHHhh
Confidence 999999999998754221 1233456789999999988889999999999999999999664 66544433332222
Q ss_pred H------------------------------------cCCccCCC-CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 604 K------------------------------------EGNILQAP-DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 604 ~------------------------------------~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
. .......+ ...+.++.+++.+||..+|++||++++|++++|-
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 290 (308)
T cd06615 211 GRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290 (308)
T ss_pred cCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 1 11111111 1357789999999999999999999999999885
Q ss_pred HH
Q psy5539 647 IK 648 (653)
Q Consensus 647 l~ 648 (653)
..
T Consensus 291 ~~ 292 (308)
T cd06615 291 KR 292 (308)
T ss_pred hh
Confidence 44
No 195
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9e-38 Score=320.57 Aligned_cols=253 Identities=24% Similarity=0.416 Sum_probs=203.7
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.++|++.+.||+|+||.||+|+.. .++..||+|+++..... ....+.+|+.++++++||||+++++++..++..
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~~aik~~~~~~~~-~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~ 81 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNL-----HTGELAAVKIIKLEPGD-DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKL 81 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEEC-----CCCeEEEEEEEecCccc-hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEE
Confidence 457889999999999999999863 35678999998754332 234678999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++++|.++++. ...+++..+..++.|++.||.|||+++|+||||||+||++++
T Consensus 82 ~iv~e~~~~~~L~~~~~~--------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~ 141 (267)
T cd06646 82 WICMEYCGGGSLQDIYHV--------------------TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTD 141 (267)
T ss_pred EEEEeCCCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC
Confidence 999999999999999862 235788999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL---YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
++.+||+|||+++...... .......++..|+|||.+. ...++.++||||||+++|||++|.. |+......+..
T Consensus 142 ~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~-p~~~~~~~~~~ 218 (267)
T cd06646 142 NGDVKLADFGVAAKITATI--AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQP-PMFDLHPMRAL 218 (267)
T ss_pred CCCEEECcCccceeecccc--cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCC-Cccccchhhhh
Confidence 9999999999997653221 1122345678899999884 3457889999999999999999665 66554443332
Q ss_pred HHHHcCCcc----CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 601 KYIKEGNIL----QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 601 ~~i~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..+...... .....++..+.+++++||+.+|++||++++|+++|+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 219 FLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred eeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 222222211 112346789999999999999999999999998764
No 196
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=6.5e-38 Score=331.34 Aligned_cols=246 Identities=24% Similarity=0.340 Sum_probs=202.3
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHH-HHHhhCCCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREA-CLLAEFDHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei-~il~~l~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+|+.. .++..||+|++.... .......+.+|. .+++.++||||+++++++...+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRK-----SDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEE
Confidence 35899999999999864 356889999986532 122233455555 4678899999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+.+|+||||||+|||++.++.+
T Consensus 76 e~~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~ 135 (321)
T cd05603 76 DYVNGGELFFHLQR--------------------ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHV 135 (321)
T ss_pred cCCCCCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCE
Confidence 99999999988852 2357888899999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++| ..||.+.+..++.+.+..+.
T Consensus 136 kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~ 212 (321)
T cd05603 136 VLTDFGLCKEGVEPE--ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYG-LPPFYSRDVSQMYDNILHKP 212 (321)
T ss_pred EEccCCCCccCCCCC--CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcC-CCCCCCCCHHHHHHHHhcCC
Confidence 999999987532211 122334578899999999999999999999999999999995 56998888888888777654
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCCH----HHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPSF----RTIYQTLW 645 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~eil~~L~ 645 (653)
...+...+.++.+++.+||+.+|.+||+. .++++++|
T Consensus 213 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05603 213 -LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVF 253 (321)
T ss_pred -CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCC
Confidence 45667788999999999999999999865 46666543
No 197
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.1e-37 Score=319.21 Aligned_cols=254 Identities=26% Similarity=0.417 Sum_probs=216.5
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|++.+.||.|+||.||+|+.. .++..||+|.+...........+.+|+.+++.++|+||+++++++..+...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDK-----RTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEEC-----CCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEE
Confidence 35777888999999999999864 3568899999876544445567899999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+|+||+++++|.++++. ..+++..+..++.|++.||.|||+++++|+||+|+||+++++
T Consensus 76 ~v~e~~~~~~L~~~~~~---------------------~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~ 134 (274)
T cd06609 76 IIMEYCGGGSCLDLLKP---------------------GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEE 134 (274)
T ss_pred EEEEeeCCCcHHHHHhh---------------------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC
Confidence 99999999999999861 257899999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
+.++|+|||+++.+.... .......++..|+|||.+.+..++.++||||||+++|||++ |..||...+..+....+.
T Consensus 135 ~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~t-g~~p~~~~~~~~~~~~~~ 211 (274)
T cd06609 135 GDVKLADFGVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAK-GEPPLSDLHPMRVLFLIP 211 (274)
T ss_pred CCEEEcccccceeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCcccCchHHHHHHhh
Confidence 999999999997764321 12233456778999999999899999999999999999999 556887777767666666
Q ss_pred cCCccCCCCC-CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 605 EGNILQAPDN-TPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 605 ~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
.+.....+.. ++.++.+++.+||..+|++|||+++++++.|-.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~ 255 (274)
T cd06609 212 KNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIK 255 (274)
T ss_pred hcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhc
Confidence 6655444545 788999999999999999999999999987643
No 198
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.5e-37 Score=317.03 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=210.2
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--------HHHHHHHHHHHHHHhhCCCCccceEEeEEe
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--------EYLQTDFEREACLLAEFDHPNIVKLLGVCA 438 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--------~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~ 438 (653)
|.+.+.||+|+||.||+|... .++..+|+|.+..... ....+.+.+|+.++++++||||+++++++.
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 76 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNA-----SSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL 76 (267)
T ss_pred ccccceeecCCCeEEEEEEec-----CCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE
Confidence 456778999999999999853 3457899998864321 223457889999999999999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
..+..++|+||+++++|.++++. ...+++..+..++.|++.||+|||+.+++||||+|+|
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~l~~--------------------~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~n 136 (267)
T cd06628 77 DADHLNIFLEYVPGGSVAALLNN--------------------YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGAN 136 (267)
T ss_pred eCCccEEEEEecCCCCHHHHHHh--------------------ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHH
Confidence 99999999999999999999962 2347888899999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCcccccccccccc----CCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYYK----GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~ 594 (653)
|++++++.++|+|||+++......... ......++..|+|||.+.+..++.++||||||+++|+|++| ..||.+.
T Consensus 137 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~ 215 (267)
T cd06628 137 ILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG-KHPFPDC 215 (267)
T ss_pred EEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhC-CCCCCCc
Confidence 999999999999999998664221111 11123467889999999999999999999999999999995 5588877
Q ss_pred CHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 595 THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 595 ~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+....+..+........+...+..+.+++++||+.+|.+||++.+|+++.|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 266 (267)
T cd06628 216 TQLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPF 266 (267)
T ss_pred cHHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCC
Confidence 666555555555555667788999999999999999999999999998753
No 199
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2e-37 Score=320.55 Aligned_cols=246 Identities=23% Similarity=0.302 Sum_probs=197.6
Q ss_pred ecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 373 LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
||+|+||.||+++.. .++..+|+|.+..... ......+..|++++++++||||+++++++..+...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVK-----NTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEc-----cCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecC
Confidence 699999999999864 3568899999864322 122345567999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++|+|.+++... ....+++..+..++.||+.||+|||+.+|+||||||+|||+++++.++|+
T Consensus 76 ~g~~L~~~~~~~------------------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~ 137 (277)
T cd05607 76 NGGDLKYHIYNV------------------GERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLS 137 (277)
T ss_pred CCCCHHHHHHhc------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEe
Confidence 999999888521 12347889999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC----HHHHHHHHHcC
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT----HEEVVKYIKEG 606 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~----~~e~~~~i~~~ 606 (653)
|||++....... ......++..|+|||.+.+..++.++||||||+++|||++|. .||.+.. ..++.......
T Consensus 138 Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~-~p~~~~~~~~~~~~~~~~~~~~ 213 (277)
T cd05607 138 DLGLAVELKDGK---TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGR-TPFKDHKEKVAKEELKRRTLED 213 (277)
T ss_pred eceeeeecCCCc---eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCC-CCCCCCcchhhHHHHHHHhhcc
Confidence 999987653221 112345788999999999999999999999999999999955 5776543 23444444443
Q ss_pred CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHH----HHHHHH
Q psy5539 607 NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRT----IYQTLW 645 (653)
Q Consensus 607 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e----il~~L~ 645 (653)
.........+.++.+|+++||+.+|.+||++++ +++|.|
T Consensus 214 ~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~ 256 (277)
T cd05607 214 EVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEF 256 (277)
T ss_pred ccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChh
Confidence 333333467899999999999999999999954 545544
No 200
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.8e-37 Score=329.56 Aligned_cols=255 Identities=20% Similarity=0.294 Sum_probs=206.9
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++.+.||+|+||.||+++.. .+++.||+|.++.. ......+.+.+|+.++..++|+||+++++++..++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMK-----NTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCe
Confidence 46889999999999999999864 35678999998642 122334568899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++... ...+++..+..++.||+.||+|||+++|+||||||+|||++
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~-------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~ 136 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKF-------------------EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD 136 (331)
T ss_pred EEEEEecCCCCcHHHHHHHh-------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC
Confidence 99999999999999999621 23578899999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-----NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
.++.+||+|||++........ .......+|+.|||||.+.. ..++.++||||||+++|||++| ..||.+.+..
T Consensus 137 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g-~~Pf~~~~~~ 214 (331)
T cd05597 137 KNGHIRLADFGSCLRLLADGT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYG-ETPFYAESLV 214 (331)
T ss_pred CCCCEEEEECCceeecCCCCC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhC-CCCCCCCCHH
Confidence 999999999999876432221 11222457899999999873 4578899999999999999995 5689888777
Q ss_pred HHHHHHHcCC-ccCCC---CCCcHHHHHHHHHhhccCCC--CCCCHHHHHHHHH
Q psy5539 598 EVVKYIKEGN-ILQAP---DNTPDALYDLMKLCWNMKPM--NRPSFRTIYQTLW 645 (653)
Q Consensus 598 e~~~~i~~~~-~~~~~---~~~~~~l~~li~~cl~~dP~--~RPs~~eil~~L~ 645 (653)
+....+.... ....+ ..++..+.+++++|+..+++ .||+++++++|.|
T Consensus 215 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 215 ETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred HHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence 7766665432 12222 34789999999998865444 3889999999976
No 201
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.3e-37 Score=320.30 Aligned_cols=248 Identities=25% Similarity=0.393 Sum_probs=204.3
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|++.+.||+|+||.||+|... .++..||+|.+...........+.+|++++++++||||+++++++...+..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHL-----LTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEc-----CCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEE
Confidence 36788899999999999999864 3567899999876544555667999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++++|..+. .+++..+..++.|++.||.|||+.+|+|+||||+|||++.+
T Consensus 76 lv~e~~~~~~l~~~~------------------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~ 131 (279)
T cd06619 76 ICTEFMDGGSLDVYR------------------------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTR 131 (279)
T ss_pred EEEecCCCCChHHhh------------------------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCC
Confidence 999999999986543 25778889999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC-------HH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT-------HE 597 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~-------~~ 597 (653)
+.++|+|||++...... ......++..|+|||.+.+..++.++||||||+++|+|++|.. ||.... ..
T Consensus 132 ~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~-pf~~~~~~~~~~~~~ 206 (279)
T cd06619 132 GQVKLCDFGVSTQLVNS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRF-PYPQIQKNQGSLMPL 206 (279)
T ss_pred CCEEEeeCCcceecccc----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCC-CchhhcccccccchH
Confidence 99999999999754221 1233467889999999999999999999999999999999554 665422 12
Q ss_pred HHHHHHHcCCccCC-CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 598 EVVKYIKEGNILQA-PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 598 e~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+....+........ ....+.++.+++.+||+.+|.+||++++++++.|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~ 256 (279)
T cd06619 207 QLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFI 256 (279)
T ss_pred HHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccc
Confidence 33333333322222 23467889999999999999999999999998764
No 202
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.3e-37 Score=321.55 Aligned_cols=252 Identities=24% Similarity=0.421 Sum_probs=212.8
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
.|+..+.||+|+||.||+|.+. .++..||+|.++........+.+.+|++++++++||||+++++++..+...++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDN-----RTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEc-----CCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEE
Confidence 3556678999999999999863 35678999998765545556789999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
|+||+++++|.+++. ...+++..+..++.|++.||.|||+++++|+||+|+||++++++
T Consensus 80 v~e~~~~~~L~~~~~---------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~ 138 (277)
T cd06642 80 IMEYLGGGSALDLLK---------------------PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG 138 (277)
T ss_pred EEEccCCCcHHHHhh---------------------cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC
Confidence 999999999999885 13478889999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~ 605 (653)
.++|+|||++....... .......++..|+|||++.+..++.++||||||+++|||++|. .|+......+....+..
T Consensus 139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~-~p~~~~~~~~~~~~~~~ 215 (277)
T cd06642 139 DVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE-PPNSDLHPMRVLFLIPK 215 (277)
T ss_pred CEEEccccccccccCcc--hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCC-CCCcccchhhHHhhhhc
Confidence 99999999987653221 1122234677899999999999999999999999999999954 58776666666666655
Q ss_pred CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 606 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+.....+...+.++.+++.+||+.+|++||++.+++++.|-
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 256 (277)
T cd06642 216 NSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 256 (277)
T ss_pred CCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHH
Confidence 55445556678899999999999999999999999998764
No 203
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.9e-37 Score=334.70 Aligned_cols=253 Identities=23% Similarity=0.309 Sum_probs=202.9
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC---
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK--- 441 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~--- 441 (653)
+|++.+.||+|+||.||+|+.. .+++.||||.+.... .....+.+.+|+++++.++|+||+++++++....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 75 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDP-----RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDP 75 (372)
T ss_pred CCcccceeeeCCCEEEEEEEEC-----CCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccc
Confidence 4677889999999999999863 356889999986532 2233457889999999999999999999998766
Q ss_pred --ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 442 --PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 442 --~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
..++|+||+. ++|.+++. ....+++..+..++.||+.||.|||+.+|+||||||+||
T Consensus 76 ~~~~~lv~e~~~-~~l~~~~~--------------------~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Ni 134 (372)
T cd07853 76 FEEIYVVTELMQ-SDLHKIIV--------------------SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNL 134 (372)
T ss_pred cceEEEEeeccc-cCHHHHHh--------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHE
Confidence 7899999996 58888775 224588999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
|+++++.+||+|||+++....... .......++..|+|||.+.+. .++.++||||||+++|||++| ..||.+.+..+
T Consensus 135 li~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~ 212 (372)
T cd07853 135 LVNSNCVLKICDFGLARVEEPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGR-RILFQAQSPIQ 212 (372)
T ss_pred EECCCCCEEeccccceeecccCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcC-CCCCCCCCHHH
Confidence 999999999999999975432221 122234567889999998875 479999999999999999995 56888776655
Q ss_pred HHHHHHcC-----------------------Cc--------cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 599 VVKYIKEG-----------------------NI--------LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 599 ~~~~i~~~-----------------------~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
..+.+.+. .. .......++++.+|+.+||+.||.+|||+.+++++.|-
T Consensus 213 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~ 291 (372)
T cd07853 213 QLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYL 291 (372)
T ss_pred HHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhh
Confidence 44443220 00 01223457889999999999999999999999999873
No 204
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=8.3e-38 Score=336.00 Aligned_cols=254 Identities=20% Similarity=0.292 Sum_probs=209.3
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++++.||+|+||+||+|+.. .++..||+|.++... .......+.+|+.++..++|+||+++++.+..++.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKK-----DTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEEC-----CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 46889999999999999999864 356789999987432 23344568889999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+++|+||||||+|||++
T Consensus 76 ~~lv~E~~~gg~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~ 135 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMK--------------------KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD 135 (360)
T ss_pred EEEEEeCCCCccHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC
Confidence 9999999999999999862 24578899999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccc---------------------------------cCCCCCCCccccccchhhccCCCCC
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYY---------------------------------KGDENDAIPVRWMPLESILYNKYTV 569 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~---------------------------------~~~~~~~~t~~y~aPE~~~~~~~t~ 569 (653)
.++.+||+|||+++........ .......||+.|+|||.+.+..++.
T Consensus 136 ~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~ 215 (360)
T cd05627 136 AKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNK 215 (360)
T ss_pred CCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCC
Confidence 9999999999998754211000 0011235789999999999999999
Q ss_pred chhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-ccCCCC--CCcHHHHHHHHHhhccCCCCCC---CHHHHHHH
Q psy5539 570 ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN-ILQAPD--NTPDALYDLMKLCWNMKPMNRP---SFRTIYQT 643 (653)
Q Consensus 570 ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~-~~~~~~--~~~~~l~~li~~cl~~dP~~RP---s~~eil~~ 643 (653)
++|||||||++|||++| .+||.+.+..+....+.... ....+. .++.++.+++.+++. +|.+|+ +++++++|
T Consensus 216 ~~DiwSlGvilyel~tG-~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 216 LCDWWSLGVIMYEMLIG-YPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred cceeccccceeeecccC-CCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 99999999999999995 56998888888777776532 222333 368899999999764 999998 57899988
Q ss_pred HH
Q psy5539 644 LW 645 (653)
Q Consensus 644 L~ 645 (653)
.|
T Consensus 294 p~ 295 (360)
T cd05627 294 PF 295 (360)
T ss_pred CC
Confidence 75
No 205
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.9e-37 Score=313.61 Aligned_cols=254 Identities=21% Similarity=0.368 Sum_probs=216.8
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|++.+.||+|+||.||+++.. .+++.||+|.+... ......+++.+|+.++++++||||+++++++...+..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSK-----EDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEc-----CCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEE
Confidence 4788999999999999999863 35678999998643 23344567899999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+|+||+++++|.+++... ....+++..++.++.|++.||.|||+.+++|+||+|+|||++.+
T Consensus 76 lv~e~~~~~~l~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~ 137 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQ------------------RGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKD 137 (256)
T ss_pred EEEecCCCCcHHHHHHhc------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC
Confidence 999999999999998621 12347888999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
+.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++++|++|. .||...+..+....+.
T Consensus 138 ~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~-~~~~~~~~~~~~~~~~ 214 (256)
T cd08218 138 GTIKLGDFGIARVLNSTVE--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLK-HAFEAGNMKNLVLKII 214 (256)
T ss_pred CCEEEeeccceeecCcchh--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCC-CCccCCCHHHHHHHHh
Confidence 9999999999976532221 112234677899999999999999999999999999999955 5887778888888887
Q ss_pred cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.....+...+.++.+++.+||+.+|.+||++.+|+++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~ 255 (256)
T cd08218 215 RGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNF 255 (256)
T ss_pred cCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcC
Confidence 77777777788999999999999999999999999998764
No 206
>KOG0033|consensus
Probab=100.00 E-value=2.6e-39 Score=308.66 Aligned_cols=254 Identities=24% Similarity=0.328 Sum_probs=215.2
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
+.|++.+.||+|+|+.||++.. ..+++.+|+|.+.-. .+....+++++|++|-+.|+|||||+|.....+.+..
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~-----~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ 85 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVH-----KTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH 85 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHh-----ccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccccee
Confidence 4677788899999999998754 345566676665422 1122456789999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc-
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN- 522 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~- 522 (653)
+||||+|.||+|..-+... ...++..+-+.++||+++|.|+|.++|||||+||.|+|+-
T Consensus 86 ylvFe~m~G~dl~~eIV~R--------------------~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLAS 145 (355)
T KOG0033|consen 86 YLVFDLVTGGELFEDIVAR--------------------EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLAS 145 (355)
T ss_pred EEEEecccchHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeee
Confidence 9999999999998876521 2367888999999999999999999999999999999994
Q ss_pred --CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 523 --DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 523 --~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
..--+||+|||+|..+. ....-....||+.|||||++...+|+..+|||+-||+||-|+. |.+||++.+..++.
T Consensus 146 K~~~A~vKL~~FGvAi~l~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~-G~~PF~~~~~~rly 221 (355)
T KOG0033|consen 146 KAKGAAVKLADFGLAIEVN---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV-GYPPFWDEDQHRLY 221 (355)
T ss_pred ccCCCceeecccceEEEeC---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHh-CCCCCCCccHHHHH
Confidence 44578999999998774 1223456789999999999999999999999999999999998 55699999999999
Q ss_pred HHHHcCCccCCC---CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAP---DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 601 ~~i~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+.|..|...-.+ ++++++.++|+++|+..||.+|.|+.|.++|+|--
T Consensus 222 e~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~ 271 (355)
T KOG0033|consen 222 EQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWIC 271 (355)
T ss_pred HHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhc
Confidence 999998764333 46889999999999999999999999999998843
No 207
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.8e-37 Score=318.13 Aligned_cols=253 Identities=25% Similarity=0.432 Sum_probs=214.6
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
.|+..+.||+|+||.||+|... ..+..||+|.++..........+.+|+.++++++|+||+++++++..+...++
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDN-----RTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWI 79 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEc-----cCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 4667788999999999999863 34678999998765544556789999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
||||+++|+|.++++. ..+++.++..++.|++.||+|||+.+++|+||+|+||++++++
T Consensus 80 v~e~~~~~~L~~~i~~---------------------~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~ 138 (277)
T cd06640 80 IMEYLGGGSALDLLRA---------------------GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG 138 (277)
T ss_pred EEecCCCCcHHHHHhc---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC
Confidence 9999999999998851 2467888999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~ 605 (653)
.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++|||++| .+|+......+....+..
T Consensus 139 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~ 215 (277)
T cd06640 139 DVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKG-EPPNSDMHPMRVLFLIPK 215 (277)
T ss_pred CEEEcccccceeccCCcc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHC-CCCCCCcChHhHhhhhhc
Confidence 999999999976533221 12233567789999999988999999999999999999995 468888777776666655
Q ss_pred CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 606 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+.....+...+..+.+++.+||+.+|++||++.+++++.+-.
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 257 (277)
T cd06640 216 NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIV 257 (277)
T ss_pred CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhh
Confidence 555555566788999999999999999999999999986543
No 208
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.8e-37 Score=317.25 Aligned_cols=246 Identities=26% Similarity=0.472 Sum_probs=200.5
Q ss_pred eeecccCCeeEEEEEeCCCCC--CccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEe
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLK--HEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFE 448 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~--~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~E 448 (653)
+.||+|+||.||+|....... ......|++|.+.... ....+.+.+|+.+++.++||||+++++++..+...++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 358999999999998643211 1234568889886533 3345678899999999999999999999999899999999
Q ss_pred ecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCc--
Q psy5539 449 YMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV-- 526 (653)
Q Consensus 449 y~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~-- 526 (653)
|+++|+|.++++.. ...+++..++.++.||+.||+|||+++|+||||||+|||++.++.
T Consensus 80 ~~~~g~L~~~l~~~-------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~ 140 (258)
T cd05078 80 YVKFGSLDTYLKKN-------------------KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRK 140 (258)
T ss_pred cCCCCcHHHHHhcC-------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccc
Confidence 99999999999722 235788899999999999999999999999999999999987765
Q ss_pred ------EEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 527 ------VKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 527 ------vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
++++|||++..... .....+++.|+|||.+.+. .++.++||||||+++|||++|+.+|+...+....
T Consensus 141 ~~~~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~ 214 (258)
T cd05078 141 TGNPPFIKLSDPGISITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK 214 (258)
T ss_pred cCCCceEEecccccccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH
Confidence 69999999865422 2233466789999999874 5799999999999999999987778877776655
Q ss_pred HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 600 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
...... ....+...+.++.+++.+||+.+|++|||+++|++.|
T Consensus 215 ~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 215 LQFYED--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHHc--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 444333 2345566778899999999999999999999999876
No 209
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3.2e-37 Score=339.81 Aligned_cols=255 Identities=18% Similarity=0.304 Sum_probs=200.0
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
..+..+|.+.+.||+|+||.||+|... .++..||||++..... ...+|+.+++.++|||||++++++...
T Consensus 62 ~~~~~~y~~~~~LG~G~fg~Vy~~~~~-----~~~~~vAiK~i~~~~~-----~~~~Ei~il~~l~h~niv~l~~~~~~~ 131 (440)
T PTZ00036 62 RSPNKSYKLGNIIGNGSFGVVYEAICI-----DTSEKVAIKKVLQDPQ-----YKNRELLIMKNLNHINIIFLKDYYYTE 131 (440)
T ss_pred cCcCCeEEEeEEEEeCCCEEEEEEEEC-----CCCCEEEEEEEecCcc-----hHHHHHHHHHhcCCCCCcceeeeEeec
Confidence 345568999999999999999999864 3557899998864321 245799999999999999999886432
Q ss_pred --------CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceec
Q psy5539 441 --------KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHR 512 (653)
Q Consensus 441 --------~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHr 512 (653)
..+++||||+++ +|.+++.... .....+++..+..++.||+.||+|||+++|+||
T Consensus 132 ~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~----------------~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHr 194 (440)
T PTZ00036 132 CFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYA----------------RNNHALPLFLVKLYSYQLCRALAYIHSKFICHR 194 (440)
T ss_pred ccccCCCceEEEEEEecCCc-cHHHHHHHHh----------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecC
Confidence 246799999975 7888876321 123568899999999999999999999999999
Q ss_pred CCCCCCEeEcCCC-cEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCC
Q psy5539 513 DLATRNCLINDQM-VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQP 590 (653)
Q Consensus 513 DLkp~NILl~~~~-~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p 590 (653)
||||+||||+.++ .+||+|||+++.+.... ......++..|||||.+.+. .++.++|||||||++|||++| .+|
T Consensus 195 DLKp~NILl~~~~~~vkL~DFGla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG-~~p 270 (440)
T PTZ00036 195 DLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILG-YPI 270 (440)
T ss_pred CcCHHHEEEcCCCCceeeeccccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhC-CCC
Confidence 9999999999664 79999999998653222 12234568889999998764 689999999999999999995 568
Q ss_pred CCCCCHHHHHHHHHcC--C-----------------c---------cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy5539 591 YYGLTHEEVVKYIKEG--N-----------------I---------LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642 (653)
Q Consensus 591 ~~~~~~~e~~~~i~~~--~-----------------~---------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 642 (653)
|.+.+..+.+..+... . . ...|...+.++.+|+.+||..+|.+|||+.++++
T Consensus 271 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 271 FSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred CCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 8887665544333210 0 0 0123346789999999999999999999999999
Q ss_pred HHHH
Q psy5539 643 TLWN 646 (653)
Q Consensus 643 ~L~~ 646 (653)
|+|-
T Consensus 351 hp~f 354 (440)
T PTZ00036 351 DPFF 354 (440)
T ss_pred ChhH
Confidence 9873
No 210
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.1e-37 Score=317.85 Aligned_cols=251 Identities=29% Similarity=0.494 Sum_probs=204.8
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHH-HHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ-TDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~-~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
|++.+.||+|+||+||+++.. .++..+|+|.+......... ....+|+.++++++||||+++++++......++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNK-----KNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEET-----TTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEEC-----CCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccc
Confidence 678899999999999999975 35678999999866443332 244669999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
||||+++++|.+++.. ...++...++.++.|++.||++||+.+++|+||||+||++++++
T Consensus 76 v~~~~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~ 135 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQK--------------------NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG 135 (260)
T ss_dssp EEEEETTEBHHHHHHH--------------------HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS
T ss_pred cccccccccccccccc--------------------cccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999961 24578999999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhc-cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHH
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE---EVVK 601 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~---e~~~ 601 (653)
.++|+|||++... ...........++..|+|||.+. +..++.++||||||+++|+|++|. .||...... +...
T Consensus 136 ~~~l~Dfg~~~~~--~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~-~p~~~~~~~~~~~~~~ 212 (260)
T PF00069_consen 136 EVKLIDFGSSVKL--SENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGK-LPFEESNSDDQLEIIE 212 (260)
T ss_dssp EEEESSGTTTEES--TSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSS-SSSTTSSHHHHHHHHH
T ss_pred ccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccc-cccccccchhhhhhhh
Confidence 9999999999753 11122334556788999999998 889999999999999999999965 577776332 3333
Q ss_pred HHHcCCccCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 602 YIKEGNILQA---PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 602 ~i~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.......... ....+.++.+++.+||+.+|++||++.++++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~ 259 (260)
T PF00069_consen 213 KILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPW 259 (260)
T ss_dssp HHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGG
T ss_pred hcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCC
Confidence 3322221111 1223489999999999999999999999998875
No 211
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-37 Score=340.02 Aligned_cols=251 Identities=23% Similarity=0.278 Sum_probs=201.1
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
...|.+.+.||+|+||.||+|+... .+..||||.... ..+.+|++++++++|+|||++++++..++..
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~-----~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~ 235 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPD-----YPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLT 235 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECC-----CCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEE
Confidence 4578999999999999999998743 457899996432 2356899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++|||++. ++|.+++.. ....+++.+++.|+.||+.||.|||+++|+||||||+||||+.
T Consensus 236 ~lv~e~~~-~~L~~~l~~-------------------~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~ 295 (461)
T PHA03211 236 CLVLPKYR-SDLYTYLGA-------------------RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG 295 (461)
T ss_pred EEEEEccC-CCHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC
Confidence 99999995 799998852 1235899999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-------CH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL-------TH 596 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~-------~~ 596 (653)
++.+||+|||+++...............+|..|||||++.+..++.++|||||||+||||++++.+.|... ..
T Consensus 296 ~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~ 375 (461)
T PHA03211 296 PEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYD 375 (461)
T ss_pred CCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcH
Confidence 99999999999976532221112223468999999999999999999999999999999998765444322 23
Q ss_pred HHHHHHHHcCCcc--CCC-------------------------------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy5539 597 EEVVKYIKEGNIL--QAP-------------------------------DNTPDALYDLMKLCWNMKPMNRPSFRTIYQT 643 (653)
Q Consensus 597 ~e~~~~i~~~~~~--~~~-------------------------------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 643 (653)
.++.+.+...... ..+ ...+..+.+|+.+||+.||.+|||+.|++++
T Consensus 376 ~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 376 AQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 3444444432211 000 0234578999999999999999999999998
Q ss_pred HHH
Q psy5539 644 LWN 646 (653)
Q Consensus 644 L~~ 646 (653)
.|-
T Consensus 456 p~f 458 (461)
T PHA03211 456 PLF 458 (461)
T ss_pred ccc
Confidence 763
No 212
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.7e-37 Score=319.50 Aligned_cols=256 Identities=27% Similarity=0.409 Sum_probs=213.8
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
+.++|++.+.||+|+||.||+|+.. .++..+|+|.++... ....+.+.+|++++++++|+||+++++++..+..
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 76 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHK-----ETGLFAAAKIIQIES-EEELEDFMVEIDILSECKHPNIVGLYEAYFYENK 76 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEc-----CCCcEEEEEEEeeCC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCe
Confidence 3457888999999999999999864 256789999987543 3345678899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||+.+|+|+||||+||+++
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-------------------~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~ 137 (280)
T cd06611 77 LWILIEFCDGGALDSIMLEL-------------------ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT 137 (280)
T ss_pred EEEEeeccCCCcHHHHHHHh-------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC
Confidence 99999999999999998621 23588999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
.++.++|+|||++....... .......++..|+|||.+. ...++.++||||||+++|||++|. +||...+..
T Consensus 138 ~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~-~p~~~~~~~ 214 (280)
T cd06611 138 LDGDVKLADFGVSAKNKSTL--QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME-PPHHELNPM 214 (280)
T ss_pred CCCCEEEccCccchhhcccc--cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCC-CCcccCCHH
Confidence 99999999999986542221 1223345678899999875 345778999999999999999954 688888777
Q ss_pred HHHHHHHcCCcc--CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 598 EVVKYIKEGNIL--QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 598 e~~~~i~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+....+..+... ..+..++.++.+++.+||+.+|.+||++.+++++.|-
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 265 (280)
T cd06611 215 RVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFV 265 (280)
T ss_pred HHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhh
Confidence 776666665432 3355688999999999999999999999999999773
No 213
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.6e-37 Score=317.84 Aligned_cols=256 Identities=21% Similarity=0.362 Sum_probs=204.4
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEecC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVG 440 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~ 440 (653)
-+.+.|.+.+.||+|+||.||+|... .++..||+|.+..... ....+.+|+.++.++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 75 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHV-----KTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKK 75 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEc-----CCCcEEEEEEEEcCCc--cHHHHHHHHHHHHHhcCCCCeeeEeeEEeec
Confidence 34567888889999999999999864 3567899999865432 235678999999998 799999999998643
Q ss_pred ------CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539 441 ------KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514 (653)
Q Consensus 441 ------~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL 514 (653)
...++||||+++|+|.+++... ....+++..+..++.|++.||+|||+++|+|+||
T Consensus 76 ~~~~~~~~~~iv~e~~~~~~L~~~l~~~------------------~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl 137 (272)
T cd06637 76 NPPGMDDQLWLVMEFCGAGSVTDLIKNT------------------KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDI 137 (272)
T ss_pred CCCCCCcEEEEEEEcCCCCcHHHHHHhc------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCC
Confidence 4579999999999999998721 1245789999999999999999999999999999
Q ss_pred CCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhc-----cCCCCCchhHHHHHHHHHHHHhCCCC
Q psy5539 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSFALQ 589 (653)
Q Consensus 515 kp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~t~ksDVwSlGvvl~ellt~~~~ 589 (653)
||+||++++++.++|+|||++...... ........++..|+|||.+. ...++.++||||||+++|||++|..
T Consensus 138 ~~~nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~- 214 (272)
T cd06637 138 KGQNVLLTENAEVKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP- 214 (272)
T ss_pred CHHHEEECCCCCEEEccCCCceecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCC-
Confidence 999999999999999999998754221 12223455778899999986 3468889999999999999999665
Q ss_pred CCCCCCHHHHHHHHHcCC-ccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 590 PYYGLTHEEVVKYIKEGN-ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 590 p~~~~~~~e~~~~i~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
||...........+.... ....+..++.++.+|+.+||..+|.+|||+.+++++.|
T Consensus 215 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (272)
T cd06637 215 PLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271 (272)
T ss_pred CccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCC
Confidence 776555444333333322 22233457889999999999999999999999998865
No 214
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.5e-37 Score=328.52 Aligned_cols=255 Identities=20% Similarity=0.269 Sum_probs=208.0
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|.+.+.||+|+||.||+++..+ .++.+|+|.+.... .......+.+|+.++..++|+||+++++.+...+.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKN-----ADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECC-----CCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCE
Confidence 468899999999999999998743 45789999986421 22334458899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.++++.. ...+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~-------------------~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~ 136 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKF-------------------EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 136 (332)
T ss_pred EEEEEeccCCCcHHHHHHHh-------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC
Confidence 99999999999999999721 23578889999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
.++.+||+|||++........ .......+|+.|||||.+. ...++.++||||||+++|||++| ..||.+.+..
T Consensus 137 ~~~~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g-~~Pf~~~~~~ 214 (332)
T cd05623 137 MNGHIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYG-ETPFYAESLV 214 (332)
T ss_pred CCCCEEEeecchheecccCCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcC-CCCCCCCCHH
Confidence 999999999999875432221 1122346789999999986 34688999999999999999995 4589888887
Q ss_pred HHHHHHHcCCc----cCCCCCCcHHHHHHHHHhhccCCCC--CCCHHHHHHHHH
Q psy5539 598 EVVKYIKEGNI----LQAPDNTPDALYDLMKLCWNMKPMN--RPSFRTIYQTLW 645 (653)
Q Consensus 598 e~~~~i~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~eil~~L~ 645 (653)
+....+..... ......++.++.+|+++|+..++.+ |++++++++|.|
T Consensus 215 ~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~ 268 (332)
T cd05623 215 ETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPF 268 (332)
T ss_pred HHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCC
Confidence 77777765432 2222457899999999998665544 789999999865
No 215
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6.7e-38 Score=332.56 Aligned_cols=245 Identities=22% Similarity=0.312 Sum_probs=201.7
Q ss_pred ecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhC---CCCccceEEeEEecCCceEEEE
Q psy5539 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEF---DHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 373 LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l---~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
||+|+||+||+|+.. .++..||||++..... ......+..|..++..+ +||||+++++++......++||
T Consensus 1 lG~G~~g~Vy~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKK-----DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEEC-----CCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEE
Confidence 799999999999863 4567899999864321 11223345566666655 6999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++.. ...+++..+..++.||++||+|||+++|+||||||+|||+++++.+
T Consensus 76 e~~~~g~L~~~l~~--------------------~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~ 135 (330)
T cd05586 76 DYMSGGELFWHLQK--------------------EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHI 135 (330)
T ss_pred cCCCCChHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCE
Confidence 99999999998862 2457899999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~ 606 (653)
||+|||+++...... .......++..|||||.+.+. .++.++||||||+++|||++|. .||.+.+..++...+..+
T Consensus 136 kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~-~Pf~~~~~~~~~~~i~~~ 212 (330)
T cd05586 136 ALCDFGLSKANLTDN--KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGW-SPFYAEDTQQMYRNIAFG 212 (330)
T ss_pred EEecCCcCcCCCCCC--CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCC-CCCCCCCHHHHHHHHHcC
Confidence 999999987532222 122334578899999998765 4899999999999999999954 588888888888888777
Q ss_pred CccCCCCCCcHHHHHHHHHhhccCCCCCC----CHHHHHHHHH
Q psy5539 607 NILQAPDNTPDALYDLMKLCWNMKPMNRP----SFRTIYQTLW 645 (653)
Q Consensus 607 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP----s~~eil~~L~ 645 (653)
.........++++.+++++||+.+|.+|| ++.++++|.|
T Consensus 213 ~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~ 255 (330)
T cd05586 213 KVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPF 255 (330)
T ss_pred CCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCcc
Confidence 65433345789999999999999999998 6889988865
No 216
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2e-37 Score=328.67 Aligned_cols=246 Identities=20% Similarity=0.311 Sum_probs=201.2
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||+||+|+.. ..++.||+|+++.... ....+.+.+|+.++.++ +||||+++++++...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLK-----KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEEC-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEE
Confidence 36899999999999864 3567899999976432 23345688999999888 6999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+|||+++++.+
T Consensus 76 e~~~~~~L~~~~~~--------------------~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~ 135 (327)
T cd05617 76 EYVNGGDLMFHMQR--------------------QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHI 135 (327)
T ss_pred eCCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCE
Confidence 99999999998852 2358899999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC------C-HHHHH
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL------T-HEEVV 600 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~------~-~~e~~ 600 (653)
||+|||+++...... .......+|..|+|||.+.+..++.++||||||+++|||++|. .||... . .+.+.
T Consensus 136 kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~-~pf~~~~~~~~~~~~~~~~ 212 (327)
T cd05617 136 KLTDYGMCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGR-SPFDIITDNPDMNTEDYLF 212 (327)
T ss_pred EEeccccceeccCCC--CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCC-CCCCccCCCcccccHHHHH
Confidence 999999987432111 1122345788999999999999999999999999999999965 577431 2 22344
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC------HHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS------FRTIYQTLW 645 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~eil~~L~ 645 (653)
..+... ....|...+..+.+++++||+.||.+|++ ++++++|.+
T Consensus 213 ~~~~~~-~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~ 262 (327)
T cd05617 213 QVILEK-PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTF 262 (327)
T ss_pred HHHHhC-CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCC
Confidence 444443 34567788999999999999999999997 568887753
No 217
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4e-37 Score=319.78 Aligned_cols=254 Identities=21% Similarity=0.280 Sum_probs=206.2
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
|+..+.||+|+||.||++... .+++.||+|.+..... ......+.+|+.++++++|+||+++++.+..++..+
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~ 76 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVR-----ATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALC 76 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEc-----CCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEE
Confidence 567788999999999999864 3568999999864322 223345778999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++|+|.+++... ....+++..++.++.|++.||.|||+.+|+||||||+||+++++
T Consensus 77 lv~e~~~g~~L~~~l~~~------------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~ 138 (285)
T cd05630 77 LVLTLMNGGDLKFHIYHM------------------GEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDH 138 (285)
T ss_pred EEEEecCCCcHHHHHHHh------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC
Confidence 999999999999998622 12347889999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH---EEVVK 601 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~---~e~~~ 601 (653)
+.++|+|||++....... ......++..|+|||.+.+..++.++||||||+++|||++| ..||..... .+...
T Consensus 139 ~~~~l~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g-~~Pf~~~~~~~~~~~~~ 214 (285)
T cd05630 139 GHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG-QSPFQQRKKKIKREEVE 214 (285)
T ss_pred CCEEEeeccceeecCCCc---cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhC-CCCCCCCCccchHHHHH
Confidence 999999999987542221 11234678899999999999999999999999999999995 458875432 12222
Q ss_pred HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHHHHHH
Q psy5539 602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS-----FRTIYQTLWNI 647 (653)
Q Consensus 602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~L~~l 647 (653)
.+........+..++.++.+|+++||+.+|++||| ++++++|.|-.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~ 265 (285)
T cd05630 215 RLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFK 265 (285)
T ss_pred hhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence 22222222345678899999999999999999999 89999988743
No 218
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=5.1e-37 Score=314.76 Aligned_cols=260 Identities=23% Similarity=0.415 Sum_probs=212.8
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|.+.+.||+|+||.||+|+.. .++..+|||.+... .......++.+|+.+++.++|+||+++++++..++.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~-----~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCL-----LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeec-----CCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCe
Confidence 46778889999999999999853 35678999987642 223345678999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.+++|||+++++|.++++... .....+++..++.++.||+.||.|||+++++|+||||+||+++
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~----------------~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~ 140 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFK----------------KQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT 140 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhh----------------ccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc
Confidence 999999999999999987321 1234588999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC--HHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT--HEEVV 600 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~--~~e~~ 600 (653)
.++.++|+|||++....... .......++..|+|||.+.+..++.++||||||+++|||++|.. ||.+.. ..+..
T Consensus 141 ~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~-p~~~~~~~~~~~~ 217 (267)
T cd08229 141 ATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS-PFYGDKMNLYSLC 217 (267)
T ss_pred CCCCEEECcchhhhccccCC--cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCC-CcccccchHHHHh
Confidence 99999999999987543221 11223456788999999999999999999999999999999665 775443 34555
Q ss_pred HHHHcCCccCCC-CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAP-DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 601 ~~i~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
+.+........+ ...+..+.+++.+||+.+|++|||+.+|++.+.++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 218 KKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred hhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 555554433332 457889999999999999999999999999988764
No 219
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.5e-37 Score=328.87 Aligned_cols=251 Identities=23% Similarity=0.271 Sum_probs=198.8
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC-
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK- 441 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~- 441 (653)
.++|++.+.||+|+||.||+++.. .++..||||.++.. ........+.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 94 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDT-----VLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKS 94 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEc-----CCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCC
Confidence 367999999999999999999863 35688999998643 22334557889999999999999999999986443
Q ss_pred -----ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 442 -----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 442 -----~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
..++||||+++ +|.+.++ ..++...+..++.||+.||.|||+++|+||||||
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~----------------------~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp 151 (359)
T cd07876 95 LEEFQDVYLVMELMDA-NLCQVIH----------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 151 (359)
T ss_pred ccccceeEEEEeCCCc-CHHHHHh----------------------ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence 47999999975 6766654 2367888999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+|||++.++.+||+|||+++..... .......+|..|+|||.+.+..++.++||||||+++|||++|. .||.+.+.
T Consensus 152 ~NIl~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~-~pf~~~~~ 227 (359)
T cd07876 152 SNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGS-VIFQGTDH 227 (359)
T ss_pred HHEEECCCCCEEEecCCCccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCC-CCCCCCCH
Confidence 9999999999999999999754221 1123346788999999999999999999999999999999954 58876654
Q ss_pred HHHHHHHHc-----------------------CCcc------------------CCCCCCcHHHHHHHHHhhccCCCCCC
Q psy5539 597 EEVVKYIKE-----------------------GNIL------------------QAPDNTPDALYDLMKLCWNMKPMNRP 635 (653)
Q Consensus 597 ~e~~~~i~~-----------------------~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~RP 635 (653)
.+....+.. .... ......+.++.+|+.+||..||++||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~ 307 (359)
T cd07876 228 IDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRI 307 (359)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCC
Confidence 332211110 0000 00112356789999999999999999
Q ss_pred CHHHHHHHHHH
Q psy5539 636 SFRTIYQTLWN 646 (653)
Q Consensus 636 s~~eil~~L~~ 646 (653)
|+.|+++|+|-
T Consensus 308 t~~e~l~hp~~ 318 (359)
T cd07876 308 SVDEALRHPYI 318 (359)
T ss_pred CHHHHhcCchh
Confidence 99999999874
No 220
>KOG0663|consensus
Probab=100.00 E-value=7.2e-38 Score=311.06 Aligned_cols=254 Identities=24% Similarity=0.371 Sum_probs=204.9
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH-HHHHHHHHHHHHHhhCCCCccceEEeEEec--C
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPNIVKLLGVCAV--G 440 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~-~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~--~ 440 (653)
.++|+.++.|++|+||.||+|+++ .+...||+|+++.+... ..--.-.|||.+|.+.+|||||.+-.+... -
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk-----~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~ 149 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDK-----KTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM 149 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccC-----CcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence 356888999999999999999853 57789999999865322 112235799999999999999999887653 4
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..||||||+++ ||...|... ..++...+...+..|+++|++|||.+.|+||||||+|+|
T Consensus 150 d~iy~VMe~~Eh-DLksl~d~m-------------------~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLL 209 (419)
T KOG0663|consen 150 DKIYIVMEYVEH-DLKSLMETM-------------------KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLL 209 (419)
T ss_pred ceeeeeHHHHHh-hHHHHHHhc-------------------cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhhee
Confidence 579999999988 999988722 246888999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
+++.|.+||+|||||+...+. .+.-+....|..|.|||.+.+. .|++..|+||+|||+.||++ +.+-|.|.+.-+.
T Consensus 210 m~~~G~lKiaDFGLAR~ygsp--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~-~kPlf~G~sE~dQ 286 (419)
T KOG0663|consen 210 LSHKGILKIADFGLAREYGSP--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLT-QKPLFPGKSEIDQ 286 (419)
T ss_pred eccCCcEEecccchhhhhcCC--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHh-cCCCCCCCchHHH
Confidence 999999999999999976433 3445667789999999999876 58999999999999999998 5567777766554
Q ss_pred HHHHHc--C-------------------CccCCC---------C-CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 600 VKYIKE--G-------------------NILQAP---------D-NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 600 ~~~i~~--~-------------------~~~~~~---------~-~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
++.|-. | .+.+.| . ..++.-.+|+..++..||.+|.|+++.++|-|
T Consensus 287 l~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~ 363 (419)
T KOG0663|consen 287 LDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEY 363 (419)
T ss_pred HHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccc
Confidence 444422 0 000001 0 14477889999999999999999999998755
No 221
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=9.8e-37 Score=318.61 Aligned_cols=253 Identities=22% Similarity=0.384 Sum_probs=208.8
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
..+|.+.+.||+|+||.||+|... .++..|++|.+...... ..+.+.+|+.+++.++|+||+++++.+..+...
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~ 92 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDV-----ATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDEL 92 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEEC-----CCCcEEEEEEEecCCcc-hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEE
Confidence 357889999999999999999853 35678999988754433 245688999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++++|.+++.. ..+++.+++.++.|++.||+|||+.+|+|+||||+|||+++
T Consensus 93 ~lv~e~~~~~~L~~~~~~---------------------~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~ 151 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTE---------------------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151 (296)
T ss_pred EEeecccCCCCHHHHHHh---------------------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC
Confidence 999999999999999851 23688899999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.+||+|||++........ ......++..|+|||.+.+..++.++||||||+++|||++|. +||......+....+
T Consensus 152 ~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~-~pf~~~~~~~~~~~~ 228 (296)
T cd06654 152 DGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE-PPYLNENPLRALYLI 228 (296)
T ss_pred CCCEEECccccchhcccccc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCC-CCCCCCCHHHhHHHH
Confidence 99999999999876432221 122345778899999999888999999999999999999955 588766654433322
Q ss_pred H-cCC-ccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 604 K-EGN-ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 604 ~-~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
. .+. ....+...+..+.+++.+||..+|++||++.+|+++.|-
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~ 273 (296)
T cd06654 229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273 (296)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhh
Confidence 2 221 123355678899999999999999999999999998764
No 222
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.7e-37 Score=320.87 Aligned_cols=254 Identities=26% Similarity=0.404 Sum_probs=204.5
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|.+.+.||+|+||.||+|+.. .++..||+|.++..........+.+|+.++++++||||+++++++......+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSK-----LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEc-----CCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEE
Confidence 57899999999999999999864 3557899999875443333456788999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||++ ++|.+++.. ....+++..+..++.||+.||+|||+.+|+|+||||+|||++++
T Consensus 81 lv~e~~~-~~l~~~l~~-------------------~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~ 140 (301)
T cd07873 81 LVFEYLD-KDLKQYLDD-------------------CGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINER 140 (301)
T ss_pred EEEeccc-cCHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCC
Confidence 9999997 589988862 12357888999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
+.+||+|||++....... .......++..|+|||.+.+. .++.++||||||+++|||++| .+||.+.+..+....+
T Consensus 141 ~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg-~~~f~~~~~~~~~~~~ 217 (301)
T cd07873 141 GELKLADFGLARAKSIPT--KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTG-RPLFPGSTVEEQLHFI 217 (301)
T ss_pred CcEEECcCcchhccCCCC--CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHH
Confidence 999999999987542221 112234557889999988754 578999999999999999995 5688877765544333
Q ss_pred HcC---------------------CccC--------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 604 KEG---------------------NILQ--------APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 604 ~~~---------------------~~~~--------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
... .... ....++.++.+|+.+|++.||.+|||+++++++.|-
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f 289 (301)
T cd07873 218 FRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYF 289 (301)
T ss_pred HHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 210 0000 012467889999999999999999999999998764
No 223
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-36 Score=330.51 Aligned_cols=256 Identities=21% Similarity=0.274 Sum_probs=203.8
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+...+|.+++.||+|+||.||++...+ ...+..||+|.+... ..+.+|++++++++||||+++++++....
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~---~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~ 159 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHG---DEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKS 159 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcC---CccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCC
Confidence 345679999999999999999997643 245678999988653 23568999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++|||++. ++|.+++. ....+++.+++.++.||+.||.|||+++|+||||||+|||+
T Consensus 160 ~~~lv~e~~~-~~l~~~l~--------------------~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill 218 (392)
T PHA03207 160 TVCMVMPKYK-CDLFTYVD--------------------RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL 218 (392)
T ss_pred EEEEEehhcC-CCHHHHHH--------------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE
Confidence 9999999985 68988884 22458899999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH----H
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH----E 597 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~----~ 597 (653)
+.++.+||+|||+++...............+|..|+|||.+.+..++.++||||||+++|||++|.. ||.+... .
T Consensus 219 ~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~-pf~~~~~~~~~~ 297 (392)
T PHA03207 219 DEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNV-TLFGKQVKSSSS 297 (392)
T ss_pred cCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCC-CCCCCCCCCcHH
Confidence 9999999999999976543332223334568999999999999999999999999999999999766 5544321 1
Q ss_pred HHHHHHHc---CC----------------------cc--CCC-----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 598 EVVKYIKE---GN----------------------IL--QAP-----DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 598 e~~~~i~~---~~----------------------~~--~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+...+.. .. .. ..+ ...+.++.+++++||..+|++|||+.+++.+.|
T Consensus 298 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 298 QLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred HHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 11111110 00 00 000 124567889999999999999999999999987
Q ss_pred HHH
Q psy5539 646 NIK 648 (653)
Q Consensus 646 ~l~ 648 (653)
-.+
T Consensus 378 f~~ 380 (392)
T PHA03207 378 FTK 380 (392)
T ss_pred hhc
Confidence 654
No 224
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=8.5e-37 Score=313.69 Aligned_cols=258 Identities=25% Similarity=0.362 Sum_probs=206.4
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV 439 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~ 439 (653)
++++++++.....||+|+||.||+|++. .++..|++|.++..... ..+.+.+|+.++++++|+||+++++++..
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~v~~k~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 76 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDL-----STQVRIAIKEIPERDSR-YVQPLHEEIALHSYLKHRNIVQYLGSDSE 76 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEec-----CCCcEEEEEEecCCCHH-HHHHHHHHHHHHHhcCCCCeeeeeeeecc
Confidence 4566677777788999999999999863 35678999988765433 34578999999999999999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCC--CHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQL--STCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
++..++|+||+++++|.++++.. ...+ ++..+..++.||+.||+|||+++|+||||||+
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~-------------------~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~ 137 (268)
T cd06624 77 NGFFKIFMEQVPGGSLSALLRSK-------------------WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGD 137 (268)
T ss_pred CCEEEEEEecCCCCCHHHHHHHh-------------------cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHH
Confidence 99999999999999999999722 1223 77888999999999999999999999999999
Q ss_pred CEeEcC-CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCC--CCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539 518 NCLIND-QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFSFALQPYYGL 594 (653)
Q Consensus 518 NILl~~-~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~t~ksDVwSlGvvl~ellt~~~~p~~~~ 594 (653)
||+++. ++.++|+|||++......+ .......++..|+|||.+.... ++.++||||||+++|+|++|. +||...
T Consensus 138 nil~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~-~p~~~~ 214 (268)
T cd06624 138 NVLVNTYSGVVKISDFGTSKRLAGIN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGK-PPFIEL 214 (268)
T ss_pred HEEEcCCCCeEEEecchhheecccCC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCC-CCCccc
Confidence 999976 6799999999987543221 1222345678999999987654 789999999999999999954 577654
Q ss_pred CHH-H-HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 595 THE-E-VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 595 ~~~-e-~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
... . .............+...++++.+++.+||+.+|.+|||+.+++++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 267 (268)
T cd06624 215 GEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPF 267 (268)
T ss_pred cChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCC
Confidence 322 2 22211122233456678899999999999999999999999998865
No 225
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.7e-37 Score=312.15 Aligned_cols=254 Identities=26% Similarity=0.462 Sum_probs=209.0
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
+.++|++.+.||+|+||.||+|... .++..+++|.++..... ..+.+.+|++++++++||||+++++++..++.
T Consensus 1 ~~~~~~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 74 (262)
T cd06613 1 PQEDYELIQRIGSGTYGDVYKARDI-----ATGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDK 74 (262)
T ss_pred CccceEEEEEecCCCceEEEEeEec-----CCCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCE
Confidence 3568999999999999999999863 24568999998755433 45678999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.+++|||+++++|.++++.. ...++..++..++.|++.||.|||+.+++|+||+|+||+++
T Consensus 75 ~~l~~e~~~~~~l~~~~~~~-------------------~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~ 135 (262)
T cd06613 75 LWIVMEYCGGGSLQDIYQVT-------------------RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT 135 (262)
T ss_pred EEEEEeCCCCCcHHHHHHhh-------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC
Confidence 99999999999999998621 14578999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC---CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN---KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
+++.+||+|||++....... .......++..|+|||.+... .++.++||||||+++|||++|. .|+.+.+..+.
T Consensus 136 ~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~-~p~~~~~~~~~ 212 (262)
T cd06613 136 EDGDVKLADFGVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQ-PPMFDLHPMRA 212 (262)
T ss_pred CCCCEEECccccchhhhhhh--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCC-CCCCCCCHHHH
Confidence 99999999999987643211 112234567789999998877 8899999999999999999955 58877666555
Q ss_pred HHHHHcCCc----cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 600 VKYIKEGNI----LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 600 ~~~i~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
...+..... ...+...+.++.+++++||..+|.+|||+++|+.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~ 261 (262)
T cd06613 213 LFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261 (262)
T ss_pred HHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 444443321 112234567899999999999999999999998764
No 226
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.9e-37 Score=327.95 Aligned_cols=255 Identities=21% Similarity=0.292 Sum_probs=207.9
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++.+.||+|+||.||+++.. .+++.||+|.++... .......+.+|+.++..++|+||+++++++..++.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMK-----HTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 47899999999999999999864 356789999986431 22234458889999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.++++.. ...+++..+..++.|++.||+|||+++|+||||||+|||++
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~-------------------~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~ 136 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKF-------------------EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD 136 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHh-------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc
Confidence 99999999999999999721 23578889999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-----NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
.++.+||+|||+++....... .......+++.|||||.+.+ +.++.++||||||+++|||++| ..||.+.+..
T Consensus 137 ~~~~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g-~~Pf~~~~~~ 214 (331)
T cd05624 137 MNGHIRLADFGSCLKMNQDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG-ETPFYAESLV 214 (331)
T ss_pred CCCCEEEEeccceeeccCCCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhC-CCCccCCCHH
Confidence 999999999999976533221 11223458899999999875 5688999999999999999995 4588888877
Q ss_pred HHHHHHHcCC-ccCCC---CCCcHHHHHHHHHhhccCCCC--CCCHHHHHHHHH
Q psy5539 598 EVVKYIKEGN-ILQAP---DNTPDALYDLMKLCWNMKPMN--RPSFRTIYQTLW 645 (653)
Q Consensus 598 e~~~~i~~~~-~~~~~---~~~~~~l~~li~~cl~~dP~~--RPs~~eil~~L~ 645 (653)
+....+.... ..+.+ ..++.++.+++.+|+...+.+ |++++++++|.|
T Consensus 215 ~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~ 268 (331)
T cd05624 215 ETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAF 268 (331)
T ss_pred HHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCC
Confidence 7777665532 12222 346889999999999866554 568999998864
No 227
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=6.8e-37 Score=316.97 Aligned_cols=251 Identities=27% Similarity=0.408 Sum_probs=207.7
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLL 446 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV 446 (653)
|++.+.||+|+||.||+|+.. .++..+++|.+.... ....+.+.+|+++++.++||||+++++++..+...++|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~-----~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v 80 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNK-----ETGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHhhcccCCCeEEEEEEEC-----CCCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEE
Confidence 567788999999999999864 356789999986543 33456788999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCc
Q psy5539 447 FEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV 526 (653)
Q Consensus 447 ~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~ 526 (653)
+||+++++|.+++.. ....+++..+..++.|++.||.|||+.+++||||||+|||++.++.
T Consensus 81 ~e~~~~~~l~~~~~~-------------------~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~ 141 (282)
T cd06643 81 IEFCAGGAVDAVMLE-------------------LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGD 141 (282)
T ss_pred EEecCCCcHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCC
Confidence 999999999988752 1245889999999999999999999999999999999999999999
Q ss_pred EEEeccCccccccccccccCCCCCCCccccccchhhc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 527 VKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 527 vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
+||+|||++....... .......++..|+|||.+. ...++.++||||||+++|||++|. +||...+..+...
T Consensus 142 ~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~-~p~~~~~~~~~~~ 218 (282)
T cd06643 142 IKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIE-PPHHELNPMRVLL 218 (282)
T ss_pred EEEccccccccccccc--cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCC-CCccccCHHHHHH
Confidence 9999999987542211 1223345788999999874 345788999999999999999865 6888777766655
Q ss_pred HHHcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 602 YIKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 602 ~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+..... ...+..++.++.+++.+||+.+|.+||++.+++++.|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 219 KIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred HHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence 5544332 2345568899999999999999999999999998875
No 228
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.2e-36 Score=316.03 Aligned_cols=251 Identities=21% Similarity=0.290 Sum_probs=206.0
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
|+..+.||+|+||+||+|+.. .+++.+|+|.+..... ......+.+|+++++.++|+||+++.+.+..++..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVR-----ATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEC-----CCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEE
Confidence 567788999999999999864 3567999999865322 223445788999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+++|+||||||+||+++++
T Consensus 77 lv~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~ 138 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNM------------------GNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDY 138 (285)
T ss_pred EEEEeccCccHHHHHHHh------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCC
Confidence 999999999999988621 12358999999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI- 603 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i- 603 (653)
+.+||+|||++....... ......++..|+|||.+.+..++.++||||||+++|||++|. .||.+.......+.+
T Consensus 139 ~~~kl~Dfg~~~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~-~P~~~~~~~~~~~~~~ 214 (285)
T cd05632 139 GHIRISDLGLAVKIPEGE---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQ-SPFRGRKEKVKREEVD 214 (285)
T ss_pred CCEEEecCCcceecCCCC---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHH
Confidence 999999999986542211 112346789999999999999999999999999999999954 588776654333322
Q ss_pred ---HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHHHH
Q psy5539 604 ---KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS-----FRTIYQTLW 645 (653)
Q Consensus 604 ---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~L~ 645 (653)
..+. ...+...+.++.+|+..||+.+|.+||+ +.+++++.+
T Consensus 215 ~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~ 263 (285)
T cd05632 215 RRVLETE-EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPF 263 (285)
T ss_pred Hhhhccc-cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChh
Confidence 2222 2345668889999999999999999999 888888754
No 229
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.6e-36 Score=313.58 Aligned_cols=253 Identities=25% Similarity=0.429 Sum_probs=215.1
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
-|+..+.||+|+||.||+|... .++..||+|.+...........+.+|+.++++++||||+++++++..+...++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDN-----RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEEC-----CCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEE
Confidence 3567788999999999999753 35678999998755444456689999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
||||+++++|.+++. ...+++..+..++.|++.||.|||+.+++|+||+|+||++++++
T Consensus 80 v~e~~~~~~l~~~i~---------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~ 138 (277)
T cd06641 80 IMEYLGGGSALDLLE---------------------PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG 138 (277)
T ss_pred EEEeCCCCcHHHHHh---------------------cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC
Confidence 999999999999985 12478999999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~ 605 (653)
.++|+|||++..+..... ......++..|+|||.+....++.++||||||+++|+|++| ..|+...........+..
T Consensus 139 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g-~~p~~~~~~~~~~~~~~~ 215 (277)
T cd06641 139 EVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKG-EPPHSELHPMKVLFLIPK 215 (277)
T ss_pred CEEEeecccceecccchh--hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcC-CCCCCccchHHHHHHHhc
Confidence 999999999876533221 12233567789999999988999999999999999999995 558877777777776666
Q ss_pred CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 606 GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 606 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+.....+...+.++.+++.+||+.+|.+||++.+++++.+-.
T Consensus 216 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~ 257 (277)
T cd06641 216 NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIV 257 (277)
T ss_pred CCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHh
Confidence 655556667889999999999999999999999999987654
No 230
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.1e-36 Score=309.77 Aligned_cols=252 Identities=25% Similarity=0.385 Sum_probs=214.3
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|+..+.||+|+||.||++... .++..+|+|.+... ........+.+|++++++++||||+++++.+..++..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRK-----ADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEc-----CCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEE
Confidence 4788899999999999999864 35678999988643 23344567899999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++++|.+++.... ...+++..+..++.|++.||+|||+++++|+||+|+||+++++
T Consensus 76 lv~e~~~~~~L~~~~~~~~------------------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~ 137 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRC------------------NSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKH 137 (256)
T ss_pred EEEecCCCCCHHHHHHHhc------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 9999999999999997321 2347899999999999999999999999999999999999854
Q ss_pred -CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 525 -MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 525 -~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
+.+||+|||++....... ......++..|+|||.+....++.++||||||+++|+|++|. .||.+.+.......+
T Consensus 138 ~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~-~~~~~~~~~~~~~~~ 213 (256)
T cd08220 138 KMVVKIGDFGISKILSSKS---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLK-RAFEAANLPALVLKI 213 (256)
T ss_pred CCEEEEccCCCceecCCCc---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCC-CCcccCchHHHHHHH
Confidence 568999999997653221 122345677899999999888999999999999999999964 588888877777777
Q ss_pred HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
..+.....++..+.++.+++.+||+.+|.+|||+++++++.
T Consensus 214 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p 254 (256)
T cd08220 214 MSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQP 254 (256)
T ss_pred HhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCC
Confidence 77766667778899999999999999999999999999875
No 231
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.1e-37 Score=320.02 Aligned_cols=255 Identities=25% Similarity=0.400 Sum_probs=210.4
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.++|++.+.||+|+||+||++... .+++.||+|.+.........+.+.+|+++++.++||||+++++++......
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHI-----PTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEc-----CCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEE
Confidence 457888899999999999999863 356789999887665555677899999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCCEeEc
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVHRDLATRNCLIN 522 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivHrDLkp~NILl~ 522 (653)
++||||+++++|.+++.. .+.+++..+..++.+++.||.|||+ ++++|+||||+||+++
T Consensus 79 ~lv~e~~~~~~L~~~~~~--------------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~ 138 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKK--------------------GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN 138 (284)
T ss_pred EEEEecCCCCCHHHHHHh--------------------ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC
Confidence 999999999999998862 2357899999999999999999997 6899999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH-----
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE----- 597 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~----- 597 (653)
+++.++|+|||++...... ......++..|+|||.+.+..++.++||||||+++|||++|. .||......
T Consensus 139 ~~~~~~l~d~gl~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~-~p~~~~~~~~~~~~ 213 (284)
T cd06620 139 SRGQIKLCDFGVSGELINS----IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGK-FPFAFSNIDDDGQD 213 (284)
T ss_pred CCCcEEEccCCcccchhhh----ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCC-CCCcccchhhhhhh
Confidence 9999999999998654211 112345788999999999889999999999999999999955 577654431
Q ss_pred ------HHHHHHHcCCccCCCC-CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 598 ------EVVKYIKEGNILQAPD-NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 598 ------e~~~~i~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
+....+........+. .++.++.+|+.+||+.+|.+|||+.+++++++-++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 214 DPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred hhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 2333333332222222 37789999999999999999999999999876654
No 232
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1e-36 Score=312.46 Aligned_cols=253 Identities=24% Similarity=0.396 Sum_probs=206.9
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-----cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-----SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-----~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
+|.+.+.||+|+||.||+|.. .++..+|||.++... .......+.+|++++++++|+||+++++++...
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~------~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT------NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEE------cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC
Confidence 356778899999999999974 245789999886432 123345688999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..++|+||+++++|.+++.. ...+++..+..++.|++.||+|||+.+|+|+||+|+||+
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 134 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNR--------------------FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVM 134 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEE
Confidence 999999999999999999962 134788899999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccc----cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYY----KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+++++.++|+|||++......... .......++..|+|||.+.+..++.++||||||+++|||++|. .||...+.
T Consensus 135 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~-~p~~~~~~ 213 (265)
T cd06631 135 LMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK-PPLASMDR 213 (265)
T ss_pred ECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCC-CccccCCh
Confidence 999999999999998754221111 1112345678899999999999999999999999999999955 58876665
Q ss_pred HHHHHHHHcC--CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 597 EEVVKYIKEG--NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 597 ~e~~~~i~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+....+... .....+...+.++.+++++||+.+|.+||++.+++++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 264 (265)
T cd06631 214 LAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264 (265)
T ss_pred HHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 5444333332 334456678899999999999999999999999998754
No 233
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.3e-36 Score=310.26 Aligned_cols=256 Identities=22% Similarity=0.389 Sum_probs=217.4
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEec--CCc
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV--GKP 442 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~--~~~ 442 (653)
+|++.+.||.|+||.||+|... .++..+|+|.++.. ......+.+.+|+.++++++|+||+++++++.. +..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRK-----SDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQT 75 (265)
T ss_pred CceeeeeeccCCCeEEEEeeec-----CCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCE
Confidence 4678899999999999999853 35678999998643 234445678899999999999999999998753 456
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhh-----hCCceecCCCCC
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLS-----DRKFVHRDLATR 517 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH-----~~~ivHrDLkp~ 517 (653)
.+++|||+++++|.+++.... .....+++..++.++.||+.||.||| +.+++|+||+|+
T Consensus 76 ~~~~~e~~~~~~L~~~l~~~~----------------~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~ 139 (265)
T cd08217 76 LYIVMEYCEGGDLAQLIQKCK----------------KERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPA 139 (265)
T ss_pred EEEEehhccCCCHHHHHHHHh----------------hcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHH
Confidence 799999999999999997332 12356899999999999999999999 899999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
||++++++.+||+|||++......... .....++..|+|||.+....++.++||||||+++|+|++| ..||...+..
T Consensus 140 nili~~~~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g-~~p~~~~~~~ 216 (265)
T cd08217 140 NIFLDANNNVKLGDFGLAKILGHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCAL-SPPFTARNQL 216 (265)
T ss_pred HEEEecCCCEEEecccccccccCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHC-CCcccCcCHH
Confidence 999999999999999999865433211 2234567889999999999999999999999999999995 4588888888
Q ss_pred HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 598 e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
++.+.+..+.....+...+.++.+++.+|++.+|++||++.+|+++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~ 264 (265)
T cd08217 217 QLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPL 264 (265)
T ss_pred HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence 888888888777778889999999999999999999999999998753
No 234
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.9e-37 Score=311.38 Aligned_cols=252 Identities=26% Similarity=0.434 Sum_probs=209.7
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.++|.+.+.||+|+||.||+|... .++..+++|.++.... .+++.+|++++++++|+||+++++++..+...
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~ 73 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHK-----ETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDL 73 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEc-----CCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcE
Confidence 467888999999999999999864 2457899999875432 56899999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++++||+++++|.+++.. ....+++..+..++.|++.||.|||+.+++|+||+|+||++++
T Consensus 74 ~l~~e~~~~~~L~~~l~~-------------------~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~ 134 (256)
T cd06612 74 WIVMEYCGAGSVSDIMKI-------------------TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE 134 (256)
T ss_pred EEEEecCCCCcHHHHHHh-------------------CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECC
Confidence 999999999999999862 1245789999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.+||+|||++....... .......++..|+|||.+.+..++.++||||||+++|||++| ..|+......+....+
T Consensus 135 ~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g-~~p~~~~~~~~~~~~~ 211 (256)
T cd06612 135 EGQAKLADFGVSGQLTDTM--AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEG-KPPYSDIHPMRAIFMI 211 (256)
T ss_pred CCcEEEcccccchhcccCc--cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhC-CCCCCCcchhhhhhhh
Confidence 9999999999987653222 112234467789999999999999999999999999999995 4588776665544443
Q ss_pred HcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 604 KEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 604 ~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..... ...+..++.++.+++.+||+.+|++|||+++|+++.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~ 255 (256)
T cd06612 212 PNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPF 255 (256)
T ss_pred ccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCC
Confidence 33221 2234457789999999999999999999999998754
No 235
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.6e-37 Score=317.56 Aligned_cols=257 Identities=25% Similarity=0.412 Sum_probs=211.9
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|++.+.||+|+||.||+|+.. ..+..||+|.++..........+.+|+.++.+++|+||+++++.+...+..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~-----~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHR-----PTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEc-----CCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEE
Confidence 36788899999999999999864 3567899999876545555568899999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCCEeEcC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVHRDLATRNCLIND 523 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivHrDLkp~NILl~~ 523 (653)
+||||+++++|.++++... ....+++..+..++.|++.||.|||+ .+|+|+||||+||+++.
T Consensus 76 lv~e~~~~~~l~~~~~~~~-----------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~ 138 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGV-----------------ATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG 138 (286)
T ss_pred EEEeecCCCCHHHHHHhcc-----------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC
Confidence 9999999999999986221 12358999999999999999999996 59999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCC------CCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK------YTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~------~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
++.+||+|||++...... ......++..|+|||.+.+.. ++.++||||||+++|||++|.. ||......
T Consensus 139 ~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~-pf~~~~~~ 213 (286)
T cd06622 139 NGQVKLCDFGVSGNLVAS----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRY-PYPPETYA 213 (286)
T ss_pred CCCEEEeecCCcccccCC----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCC-CCCCcchh
Confidence 999999999998754211 122345677899999986543 5889999999999999999655 77655544
Q ss_pred HHH---HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 598 EVV---KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 598 e~~---~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
... ..+..+.....+..++.++.+++.+||+.+|++||++.+++++.|-..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~ 267 (286)
T cd06622 214 NIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVK 267 (286)
T ss_pred hHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhh
Confidence 433 334455555666778999999999999999999999999999987543
No 236
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.5e-36 Score=310.64 Aligned_cols=258 Identities=23% Similarity=0.389 Sum_probs=212.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|++.+.||.|+||+||+|... .++..+++|++.........+.+.+|+++++.++|+||+++++.+..++..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICL-----PNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEc-----CCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEE
Confidence 46889999999999999999863 2557899999975544345678999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+|+||+++++|.++++...+ ...+++..+..++.|++.||+|||+.+++|+||+|+||+++++
T Consensus 76 iv~e~~~~~~l~~~~~~~~~-----------------~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~ 138 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYP-----------------RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGED 138 (267)
T ss_pred EEEeccCCCcHHHHHHHhcc-----------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC
Confidence 99999999999999973221 2357899999999999999999999999999999999999999
Q ss_pred CcEEEeccCcccccccccccc--CCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
+.++|+|||++.......... ......++..|+|||.+... .++.++||||||+++|||++|. .||...+..+...
T Consensus 139 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~-~p~~~~~~~~~~~ 217 (267)
T cd06610 139 GSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGA-APYSKYPPMKVLM 217 (267)
T ss_pred CCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCC-CCccccChhhhHH
Confidence 999999999987664433221 12233567889999998877 7899999999999999999955 5887776665555
Q ss_pred HHHcCCccCCC-----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 602 YIKEGNILQAP-----DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 602 ~i~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+........+ ...+..+.+++.+||..+|++||++.+|+++.|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~ 266 (267)
T cd06610 218 LTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKF 266 (267)
T ss_pred HHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCC
Confidence 54443322222 246788999999999999999999999998764
No 237
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.3e-36 Score=315.92 Aligned_cols=255 Identities=22% Similarity=0.384 Sum_probs=212.9
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
...+|++.+.||.|+||.||+|... .++..|++|.+...... ..+.+.+|+.+++.++|+||+++++++..++.
T Consensus 17 ~~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 90 (296)
T cd06655 17 PKKKYTRYEKIGQGASGTVFTAIDV-----ATGQEVAIKQINLQKQP-KKELIINEILVMKELKNPNIVNFLDSFLVGDE 90 (296)
T ss_pred CcceEEEEEEEecCCCeEEEEEEEc-----CCCcEEEEEEEecccCc-hHHHHHHHHHHHHhcCCCceeeeeeeEecCce
Confidence 3457899999999999999999853 35678999988654332 34578899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++|+||+++++|.+++.. ..+++.+++.++.|++.||+|||+.+++|+||||+||+++
T Consensus 91 ~~lv~e~~~~~~L~~~~~~---------------------~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~ 149 (296)
T cd06655 91 LFVVMEYLAGGSLTDVVTE---------------------TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG 149 (296)
T ss_pred EEEEEEecCCCcHHHHHHh---------------------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 9999999999999998851 2478999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||++........ ......++..|+|||.+....++.++||||||+++|+|++| ..||.+.+..+....
T Consensus 150 ~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg-~~pf~~~~~~~~~~~ 226 (296)
T cd06655 150 MDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG-EPPYLNENPLRALYL 226 (296)
T ss_pred CCCCEEEccCccchhcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHH
Confidence 999999999999876533321 12234567789999999988999999999999999999995 458877766554444
Q ss_pred HHcCC--ccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 603 IKEGN--ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 603 i~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+.... ....+..++..+.+++++||..+|.+||++.+|+++.|--
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~ 273 (296)
T cd06655 227 IATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (296)
T ss_pred HHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence 43322 2334567889999999999999999999999999988753
No 238
>KOG0032|consensus
Probab=100.00 E-value=6e-37 Score=327.03 Aligned_cols=252 Identities=26% Similarity=0.393 Sum_probs=220.0
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH--HHHHHHHHHHHHHhhCC-CCccceEEeEEecC
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE--YLQTDFEREACLLAEFD-HPNIVKLLGVCAVG 440 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~--~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~ 440 (653)
...|.+.+.||+|.||.||+++.+ .++..+|+|.++..... .....+.+|+.+|+++. |||||.+.++++..
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~-----~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~ 108 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREK-----STGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP 108 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEec-----CCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence 456888899999999999999865 35789999999765332 23468999999999998 99999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...++|||++.||.|.+.+.. . .+++.++..++.||+.++.|||+.||+||||||+|+|
T Consensus 109 ~~~~lvmEL~~GGeLfd~i~~-------------------~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L 167 (382)
T KOG0032|consen 109 DSVYLVMELCEGGELFDRIVK-------------------K--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLL 167 (382)
T ss_pred CeEEEEEEecCCchHHHHHHH-------------------c--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHee
Confidence 999999999999999999861 1 2899999999999999999999999999999999999
Q ss_pred EcCC----CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 521 INDQ----MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 521 l~~~----~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+... +.+|++|||++..... ........||+.|+|||++....|+.++||||+|+++|.|++ |.+||.+.+.
T Consensus 168 ~~~~~~~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~-G~~PF~~~~~ 243 (382)
T KOG0032|consen 168 LASKDEGSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLS-GVPPFWGETE 243 (382)
T ss_pred eccccCCCCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhh-CCCCCcCCCh
Confidence 9533 5799999999987643 223355688999999999999999999999999999999987 6779999999
Q ss_pred HHHHHHHHcCCccCCC---CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 597 EEVVKYIKEGNILQAP---DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 597 ~e~~~~i~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+....|..+...... +.++..+.++++.++..||..|+|+.++++|+|
T Consensus 244 ~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 244 FEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred hHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 9999999998763222 357899999999999999999999999999987
No 239
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.6e-37 Score=319.05 Aligned_cols=253 Identities=25% Similarity=0.392 Sum_probs=202.8
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|++.+.||+|+||.||+|+.. .++..||+|.++.... ......+.+|++++++++|+||+++++++......+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~-----~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNR-----ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEEC-----CCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceE
Confidence 3678899999999999999864 3567899999864322 223356788999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+|+||++ ++|.+++.. ....+++..++.++.||++||.|||+++++||||||+||+++.+
T Consensus 76 lv~e~~~-~~l~~~~~~-------------------~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~ 135 (284)
T cd07839 76 LVFEYCD-QDLKKYFDS-------------------CNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN 135 (284)
T ss_pred EEEecCC-CCHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCC
Confidence 9999997 588888752 12458999999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
+.+||+|||+++...... .......++..|+|||.+.+. .++.++||||||+++|||++|+.+++.+.+..+..+.+
T Consensus 136 ~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~ 213 (284)
T cd07839 136 GELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI 213 (284)
T ss_pred CcEEECccchhhccCCCC--CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHH
Confidence 999999999987542211 112234567889999998765 47899999999999999999888777776665544433
Q ss_pred HcCC-------------------cc---------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 604 KEGN-------------------IL---------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 604 ~~~~-------------------~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.... .. +.....+.++.+++++||+.||.+|||+++++++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~ 283 (284)
T cd07839 214 FRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283 (284)
T ss_pred HHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCC
Confidence 2100 00 011246788999999999999999999999998765
No 240
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.9e-36 Score=317.58 Aligned_cols=255 Identities=23% Similarity=0.340 Sum_probs=210.2
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++.+.||+|+||.||+++.. ..+..|++|.+..... ....+.+.+|+++++.++||||+++++.+..++.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHK-----ETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEEC-----CCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCE
Confidence 46889999999999999999864 3567899999876532 2334578899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++++|.++++. ...+++..+..++.|++.||.|||+++++||||||+||+++
T Consensus 76 ~~lv~e~~~g~~L~~~l~~--------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~ 135 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKN--------------------IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT 135 (305)
T ss_pred EEEEEecCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC
Confidence 9999999999999999962 23578899999999999999999999999999999999999
Q ss_pred CCCcEEEeccCcccccccccc-------------ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCC
Q psy5539 523 DQMVVKIADFGLSRKMYLQDY-------------YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~ 589 (653)
+++.+||+|||+++....... ........++..|+|||.+....++.++||||||+++|||++|. .
T Consensus 136 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~-~ 214 (305)
T cd05609 136 SMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGC-V 214 (305)
T ss_pred CCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCC-C
Confidence 999999999999864211100 00111234577899999999889999999999999999999955 5
Q ss_pred CCCCCCHHHHHHHHHcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCC---HHHHHHHHH
Q psy5539 590 PYYGLTHEEVVKYIKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPS---FRTIYQTLW 645 (653)
Q Consensus 590 p~~~~~~~e~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~eil~~L~ 645 (653)
||.+.+.+++...+..+.. +......+.++.+++.+||+.+|++||+ +.+++++.|
T Consensus 215 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~ 275 (305)
T cd05609 215 PFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRF 275 (305)
T ss_pred CCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCcc
Confidence 8888888888887766543 2222357899999999999999999998 577777765
No 241
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.9e-37 Score=328.83 Aligned_cols=251 Identities=22% Similarity=0.241 Sum_probs=200.5
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC--
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG-- 440 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~-- 440 (653)
.++|.+.+.||+|+||.||+|... ..+..||||.++... .......+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~ 97 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDA-----ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS 97 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEEC-----CCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccc
Confidence 468999999999999999999863 345789999987532 233445688999999999999999999987543
Q ss_pred ----CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 441 ----KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 441 ----~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
...++||||+++ +|.+++. ..+++..+..++.|++.||+|||+++|+||||||
T Consensus 98 ~~~~~~~~lv~e~~~~-~l~~~~~----------------------~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp 154 (364)
T cd07875 98 LEEFQDVYIVMELMDA-NLCQVIQ----------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154 (364)
T ss_pred ccccCeEEEEEeCCCC-CHHHHHH----------------------hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCH
Confidence 357999999965 7877764 2367888999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+|||+++++.+||+|||+++...... ......++..|+|||.+.+..++.++||||||+++|||++|. .||.+.+.
T Consensus 155 ~NIll~~~~~~kL~DfG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~-~pf~~~~~ 230 (364)
T cd07875 155 SNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG-VLFPGTDH 230 (364)
T ss_pred HHEEECCCCcEEEEeCCCccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCC-CCCCCCCH
Confidence 99999999999999999997542211 123346788999999999999999999999999999999965 58877766
Q ss_pred HHHHHHHHcCCccC-----------------------------------------CCCCCcHHHHHHHHHhhccCCCCCC
Q psy5539 597 EEVVKYIKEGNILQ-----------------------------------------APDNTPDALYDLMKLCWNMKPMNRP 635 (653)
Q Consensus 597 ~e~~~~i~~~~~~~-----------------------------------------~~~~~~~~l~~li~~cl~~dP~~RP 635 (653)
.+....+......+ .....+.++.+|+.+|++.||.+||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ 310 (364)
T cd07875 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310 (364)
T ss_pred HHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCC
Confidence 55444332210000 0011345789999999999999999
Q ss_pred CHHHHHHHHHH
Q psy5539 636 SFRTIYQTLWN 646 (653)
Q Consensus 636 s~~eil~~L~~ 646 (653)
|+.++++|.|-
T Consensus 311 t~~e~L~hp~~ 321 (364)
T cd07875 311 SVDEALQHPYI 321 (364)
T ss_pred CHHHHhcCccc
Confidence 99999998763
No 242
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=6.4e-37 Score=313.51 Aligned_cols=253 Identities=27% Similarity=0.447 Sum_probs=212.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|++.+.||+|+||.||+|... .++..||+|.+...........+.+|++++++++||||+++++++..+...+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHR-----PTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEc-----CCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEE
Confidence 35778889999999999999864 3568899999877655556678999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCCEeEcC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVHRDLATRNCLIND 523 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivHrDLkp~NILl~~ 523 (653)
+++||+++++|.+++... ...++...+..++.|++.||+|||+ .+++|+||||+||++++
T Consensus 76 lv~e~~~~~~L~~~~~~~-------------------~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~ 136 (265)
T cd06605 76 ICMEYMDGGSLDKILKEV-------------------QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS 136 (265)
T ss_pred EEEEecCCCcHHHHHHHc-------------------cCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC
Confidence 999999999999998722 1457888999999999999999999 99999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-----CHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL-----THEE 598 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~-----~~~e 598 (653)
++.++|+|||++........ ....++..|+|||.+.+..++.++||||||+++|+|++|.. ||... ...+
T Consensus 137 ~~~~~l~d~g~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~-p~~~~~~~~~~~~~ 211 (265)
T cd06605 137 RGQIKLCDFGVSGQLVNSLA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF-PYPPENDPPDGIFE 211 (265)
T ss_pred CCCEEEeecccchhhHHHHh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC-CCCccccccccHHH
Confidence 99999999999875532211 12556778999999999999999999999999999999654 66543 3344
Q ss_pred HHHHHHcCCccCCCCC-CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 599 VVKYIKEGNILQAPDN-TPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 599 ~~~~i~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
..+.+..+.....+.. .+.++.++|.+||..+|++|||+.+++++.|-
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 260 (265)
T cd06605 212 LLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260 (265)
T ss_pred HHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchh
Confidence 5555555544444444 78899999999999999999999999999875
No 243
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9.3e-37 Score=327.10 Aligned_cols=251 Identities=22% Similarity=0.253 Sum_probs=198.4
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC--
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG-- 440 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~-- 440 (653)
.++|++.+.||+|+||.||+|... ..+..||||.++... .......+.+|+.+++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 90 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDA-----VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKS 90 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEec-----CCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccc
Confidence 468999999999999999999853 356789999987542 333455778999999999999999999988643
Q ss_pred ----CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 441 ----KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 441 ----~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
...++||||+++ +|.+++. ..+++..+..++.|++.||+|||+++|+||||||
T Consensus 91 ~~~~~~~~lv~e~~~~-~l~~~~~----------------------~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp 147 (355)
T cd07874 91 LEEFQDVYLVMELMDA-NLCQVIQ----------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 147 (355)
T ss_pred ccccceeEEEhhhhcc-cHHHHHh----------------------hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence 357999999965 6777664 2367888999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+|||+++++.+||+|||+++...... ......+|..|+|||.+.+..++.++||||||+++|||++|. .||.+.+.
T Consensus 148 ~Nill~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~-~pf~~~~~ 223 (355)
T cd07874 148 SNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK-ILFPGRDY 223 (355)
T ss_pred HHEEECCCCCEEEeeCcccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCH
Confidence 99999999999999999997542211 123346788999999999999999999999999999999955 58876654
Q ss_pred HHHHHHHHcC-----------------------Cc------------------cCCCCCCcHHHHHHHHHhhccCCCCCC
Q psy5539 597 EEVVKYIKEG-----------------------NI------------------LQAPDNTPDALYDLMKLCWNMKPMNRP 635 (653)
Q Consensus 597 ~e~~~~i~~~-----------------------~~------------------~~~~~~~~~~l~~li~~cl~~dP~~RP 635 (653)
.+....+... .. ...+...+.++.+|+.+|+..||++||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rp 303 (355)
T cd07874 224 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303 (355)
T ss_pred HHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcC
Confidence 3322211100 00 000112346789999999999999999
Q ss_pred CHHHHHHHHHH
Q psy5539 636 SFRTIYQTLWN 646 (653)
Q Consensus 636 s~~eil~~L~~ 646 (653)
|+.++++++|-
T Consensus 304 s~~ell~hp~~ 314 (355)
T cd07874 304 SVDEALQHPYI 314 (355)
T ss_pred CHHHHhcCcch
Confidence 99999999764
No 244
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.2e-37 Score=315.62 Aligned_cols=254 Identities=23% Similarity=0.421 Sum_probs=204.6
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
+.++|.+.+.||+|+||.||+|+.. .+++.||+|.++..... ....+.+|+.+++.++||||+++++++..++.
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~-~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~ 80 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNV-----NTGELAAIKVIKLEPGE-DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDK 80 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEc-----CCCcEEEEEEEecCchh-HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCE
Confidence 4457888899999999999999863 35678999998765433 33467899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++|+||+++++|.++++. ...+++.+++.++.|++.||.|||+.+++|+||||+||+++
T Consensus 81 ~~lv~e~~~~~~L~~~~~~--------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~ 140 (267)
T cd06645 81 LWICMEFCGGGSLQDIYHV--------------------TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT 140 (267)
T ss_pred EEEEEeccCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC
Confidence 9999999999999999862 23578999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL---YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
.++.+||+|||++...... ........++..|+|||.+. ...++.++||||||+++|||+++.. |+........
T Consensus 141 ~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~-p~~~~~~~~~ 217 (267)
T cd06645 141 DNGHVKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQP-PMFDLHPMRA 217 (267)
T ss_pred CCCCEEECcceeeeEccCc--ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCC-Ccccccchhh
Confidence 9999999999998755321 12223446788999999874 4568899999999999999999665 6655443333
Q ss_pred HHHHHcCCccC----CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 600 VKYIKEGNILQ----APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 600 ~~~i~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
........... ....++..+.+++.+||..+|++||++++|+++.|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 218 LFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 32222222211 11246788999999999999999999999988753
No 245
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.6e-36 Score=315.88 Aligned_cols=256 Identities=27% Similarity=0.414 Sum_probs=209.6
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
.+.+.|++++.||+|+||.||+|+.. .++..+++|.+.... ....+.+.+|+.+++.++|+||+++++.+..++
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~-----~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 82 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNK-----ETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYWDG 82 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEEC-----CCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence 34456889999999999999999864 356789999987543 334567889999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+++++|..++.. ....+++..+..++.|++.||.|||+.+++||||||+||++
T Consensus 83 ~~~lv~e~~~~~~l~~~~~~-------------------~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili 143 (292)
T cd06644 83 KLWIMIEFCPGGAVDAIMLE-------------------LDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL 143 (292)
T ss_pred eEEEEEecCCCCcHHHHHHh-------------------hcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE
Confidence 99999999999999988752 12357899999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+.++.+||+|||++...... ........++..|+|||.+. ...++.++||||||+++|||++|. +|+...+.
T Consensus 144 ~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~-~p~~~~~~ 220 (292)
T cd06644 144 TLDGDIKLADFGVSAKNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE-PPHHELNP 220 (292)
T ss_pred cCCCCEEEccCccceecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCC-CCCccccH
Confidence 99999999999998653221 11122345677899999885 345788999999999999999965 58877666
Q ss_pred HHHHHHHHcCCcc--CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 597 EEVVKYIKEGNIL--QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 597 ~e~~~~i~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+....+...... ..+..++.++.+++.+||+.+|++||++++++++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 271 (292)
T cd06644 221 MRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPF 271 (292)
T ss_pred HHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 6655555443322 234567889999999999999999999999998865
No 246
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.2e-36 Score=322.50 Aligned_cols=254 Identities=17% Similarity=0.255 Sum_probs=198.9
Q ss_pred EEeeeccc--CCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 369 YVRDLGQG--AFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 369 ~~~~LG~G--~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
+++.||+| +||+||+++.. .++..||+|+++... .......+.+|+.+++.++||||+++++++..++..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYK-----PTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeec-----ccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEE
Confidence 45679999 78999999864 467889999997543 23445568889999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
||||+++|+|.+++..+ ....+++..++.++.|++.||+|||+++|+||||||+|||++.++
T Consensus 77 v~e~~~~~~l~~~~~~~------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~ 138 (327)
T cd08227 77 VTSFMAYGSAKDLICTH------------------FMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG 138 (327)
T ss_pred EEeccCCCcHHHHHHhh------------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC
Confidence 99999999999998632 123478999999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccc-----cCCCCCCCccccccchhhcc--CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 526 VVKIADFGLSRKMYLQDYY-----KGDENDAIPVRWMPLESILY--NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~--~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
.++++|||.+......... .......++..|+|||.+.+ ..++.++||||||+++|||++|. .||......+
T Consensus 139 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~-~pf~~~~~~~ 217 (327)
T cd08227 139 KVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH-VPFKDMPATQ 217 (327)
T ss_pred cEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCC-CCCCCcchhH
Confidence 9999999875433211110 01122345677999999976 35899999999999999999954 5887665544
Q ss_pred HHHHHHcCCccC---------------------------------------------CCCCCcHHHHHHHHHhhccCCCC
Q psy5539 599 VVKYIKEGNILQ---------------------------------------------APDNTPDALYDLMKLCWNMKPMN 633 (653)
Q Consensus 599 ~~~~i~~~~~~~---------------------------------------------~~~~~~~~l~~li~~cl~~dP~~ 633 (653)
.......+.... .....++++.+|+.+||+.||++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 297 (327)
T cd08227 218 MLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDA 297 (327)
T ss_pred HHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchh
Confidence 333322221110 01124568999999999999999
Q ss_pred CCCHHHHHHHHHH
Q psy5539 634 RPSFRTIYQTLWN 646 (653)
Q Consensus 634 RPs~~eil~~L~~ 646 (653)
|||++++++++|-
T Consensus 298 Rpt~~ell~~p~f 310 (327)
T cd08227 298 RPSASTLLNHSFF 310 (327)
T ss_pred cCCHHHHhcChhh
Confidence 9999999998764
No 247
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.5e-36 Score=314.72 Aligned_cols=263 Identities=23% Similarity=0.397 Sum_probs=208.0
Q ss_pred ccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEe
Q psy5539 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLG 435 (653)
Q Consensus 357 l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g 435 (653)
+..+..+.++|++.+.||+|+||.||+|+.. ..++.+|+|.++.... ....+.+|+.+++++ +||||+++++
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~ 82 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNK-----KNGSKAAVKILDPIHD--IDEEIEAEYNILKALSDHPNVVKFYG 82 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEEC-----CCCceeEEEeeccccc--hHHHHHHHHHHHHHHhcCCCeeeeee
Confidence 3445567789999999999999999999864 3467899998865322 235678899999999 6999999999
Q ss_pred EEe-----cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCce
Q psy5539 436 VCA-----VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFV 510 (653)
Q Consensus 436 ~~~-----~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~iv 510 (653)
++. .+...++||||+++++|.++++... .....+++..+..++.|++.||.|||+.+++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 146 (286)
T cd06638 83 MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFL----------------KRGERMEEPIIAYILHEALMGLQHLHVNKTI 146 (286)
T ss_pred eeeecccCCCCeEEEEEeecCCCCHHHHHHHhh----------------ccCccccHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 874 3456899999999999999886221 1234578889999999999999999999999
Q ss_pred ecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-----CCCCCchhHHHHHHHHHHHHh
Q psy5539 511 HRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-----NKYTVESDVWAFGVCLWEIFS 585 (653)
Q Consensus 511 HrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~t~ksDVwSlGvvl~ellt 585 (653)
||||||+||++++++.+||+|||+++....... ......++..|+|||.+.. ..++.++||||||+++|||++
T Consensus 147 H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~ 224 (286)
T cd06638 147 HRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD 224 (286)
T ss_pred ccCCCHHhEEECCCCCEEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc
Confidence 999999999999999999999999876532221 1223457889999998753 457899999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 586 FALQPYYGLTHEEVVKYIKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 586 ~~~~p~~~~~~~e~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
|.. |+......+....+..... ...+..++.++.+++.+||+.+|++|||+.+|+++++
T Consensus 225 g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 225 GDP-PLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred CCC-CCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 654 7766554443333322221 2234456789999999999999999999999999875
No 248
>KOG0594|consensus
Probab=100.00 E-value=2.2e-37 Score=313.44 Aligned_cols=255 Identities=25% Similarity=0.388 Sum_probs=203.9
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCc-cceEEeEEecCC-
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPN-IVKLLGVCAVGK- 441 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~Hpn-Iv~l~g~~~~~~- 441 (653)
..|..+++||+|+||+||+|+.. .+++.||+|+++-+.. +..-....+|+.++++|+|+| ||+|++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~-----~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~ 85 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSK-----RTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN 85 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEe-----cCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc
Confidence 34666778999999999999964 4568999999976543 223345689999999999999 999999998776
Q ss_pred -----ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 442 -----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 442 -----~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
.++|||||+.. ||..|+....+.. ..++...+..++.||+.||+|||+++|+||||||
T Consensus 86 ~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~----------------~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKP 148 (323)
T KOG0594|consen 86 HRGIGKLYLVFEFLDR-DLKKYMDSLPKKP----------------QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKP 148 (323)
T ss_pred ccccceEEEEEEeecc-cHHHHHHhccccc----------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCc
Confidence 78999999966 9999998543211 3456688999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
+||||+++|.+||+|||+|+...... ..-....+|..|.|||++.+. .|+...||||+|||+.||++ +.+-|.+.+
T Consensus 149 QNlLi~~~G~lKlaDFGlAra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~-~~~LFpG~s 225 (323)
T KOG0594|consen 149 QNLLISSSGVLKLADFGLARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFT-RRPLFPGDS 225 (323)
T ss_pred ceEEECCCCcEeeeccchHHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHh-CCCCCCCCc
Confidence 99999999999999999998553222 123445678899999999987 79999999999999999999 666888877
Q ss_pred HHHHHHHHHcC--Cc--------c-------CCC------------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 596 HEEVVKYIKEG--NI--------L-------QAP------------DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 596 ~~e~~~~i~~~--~~--------~-------~~~------------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
..+....|-.- .. . ..+ +....+..+++.+|++.+|.+|.|++.+++|.
T Consensus 226 e~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~ 303 (323)
T KOG0594|consen 226 EIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHP 303 (323)
T ss_pred HHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcCh
Confidence 76555444220 00 0 000 11224788999999999999999999999884
No 249
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.9e-36 Score=315.16 Aligned_cols=249 Identities=24% Similarity=0.382 Sum_probs=214.0
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|.+.+.||+|+||.||++... .++..||+|.++... .....+.+.+|++++++++||||+++++++..+..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHK-----GSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEc-----CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCe
Confidence 46889999999999999999864 356789999986532 22344678899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++++|.+++.. ...++...+..++.|++.||.|||+.+++|+||+|+|||++
T Consensus 76 ~~~v~e~~~~~~L~~~~~~--------------------~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~ 135 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRK--------------------SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD 135 (290)
T ss_pred EEEEEecCCCCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC
Confidence 9999999999999999862 24578999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+++.+||+|||++...... .....+++.|+|||.+.+...+.++||||||+++|+|++| ..||...+..+..+.
T Consensus 136 ~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~ 209 (290)
T cd05580 136 SDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAG-YPPFFDDNPIQIYEK 209 (290)
T ss_pred CCCCEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhC-CCCCCCCCHHHHHHH
Confidence 9999999999998765322 2334577899999999888899999999999999999995 568887777777776
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW 645 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~ 645 (653)
+..+. ...+...+..+.+++.+||..+|.+|+ ++++++++.|
T Consensus 210 ~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~ 256 (290)
T cd05580 210 ILEGK-VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPW 256 (290)
T ss_pred HhcCC-ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcc
Confidence 66554 456677889999999999999999999 8999998875
No 250
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.4e-37 Score=316.92 Aligned_cols=252 Identities=27% Similarity=0.412 Sum_probs=196.8
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH-HHHHHHHHHHHHHhhC---CCCccceEEeEEec--
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEF---DHPNIVKLLGVCAV-- 439 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~-~~~~~f~~Ei~il~~l---~HpnIv~l~g~~~~-- 439 (653)
+|++.+.||+|+||.||+|+.. .+++.||+|.++..... .....+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~ 75 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDP-----HSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSR 75 (288)
T ss_pred CceEeeEEeecCCeEEEEEEEC-----CCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecccc
Confidence 4778899999999999999864 35688999998753221 1123455677776665 79999999998754
Q ss_pred ---CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 440 ---GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 440 ---~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
....++||||+++ +|.+++... ....+++..+..++.||+.||.|||+++|+||||||
T Consensus 76 ~~~~~~~~lv~e~~~~-~l~~~~~~~------------------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp 136 (288)
T cd07863 76 TDRETKVTLVFEHVDQ-DLRTYLDKV------------------PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKP 136 (288)
T ss_pred CCCCceEEEEEccccc-CHHHHHHhc------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 3457999999974 899988621 123478999999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+|||+++++.+||+|||+++...... ......++..|+|||.+.+..++.++||||||+++|||++ +.+||.+...
T Consensus 137 ~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~-g~~~f~~~~~ 212 (288)
T cd07863 137 ENILVTSGGQVKLADFGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSE 212 (288)
T ss_pred HHEEECCCCCEEECccCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHh-CCcCcCCCCH
Confidence 99999999999999999997653211 1223456888999999999999999999999999999997 5668877665
Q ss_pred HHHHHHHHcCC------------------cc--------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 597 EEVVKYIKEGN------------------IL--------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 597 ~e~~~~i~~~~------------------~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+....+.... .. .....++..+.+++.+|++.||++|||+.+++++.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~ 287 (288)
T cd07863 213 ADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPF 287 (288)
T ss_pred HHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 55443332200 00 011346778899999999999999999999998765
No 251
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.4e-36 Score=347.37 Aligned_cols=269 Identities=22% Similarity=0.302 Sum_probs=210.2
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|++.+.||+|+||.||+|+.. .+++.||||+++... .+...+++.+|++++++++||||+++++++..++.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~-----~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDP-----VCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEEC-----CCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCE
Confidence 57899999999999999999864 356789999997542 24456679999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.+++......... .......+++..+++++.||++||+|||+++|+||||||+|||++
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l---------~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd 147 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESL---------SKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG 147 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhcccc---------chhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc
Confidence 99999999999999999743211100 001124567888999999999999999999999999999999999
Q ss_pred CCCcEEEeccCcccccccccc----------------ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhC
Q psy5539 523 DQMVVKIADFGLSRKMYLQDY----------------YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF 586 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~----------------~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~ 586 (653)
.++.+||+|||+++....... ........||+.|||||.+.+..++.++||||||+++|||++|
T Consensus 148 ~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG 227 (932)
T PRK13184 148 LFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTL 227 (932)
T ss_pred CCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHC
Confidence 999999999999976521110 0011223578999999999999999999999999999999996
Q ss_pred CCCCCCCCCHHHHHHHHHcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCC-CHHHHHHHHHHHH
Q psy5539 587 ALQPYYGLTHEEVVKYIKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRP-SFRTIYQTLWNIK 648 (653)
Q Consensus 587 ~~~p~~~~~~~e~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~eil~~L~~l~ 648 (653)
. .||......++......... ......+++.+.+++.+|++.+|++|| +++++.+.|....
T Consensus 228 ~-~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 228 S-FPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred C-CCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 5 58876555444332111111 111235788999999999999999996 5666777766553
No 252
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.2e-36 Score=315.07 Aligned_cols=254 Identities=25% Similarity=0.419 Sum_probs=200.4
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|.+.+.||+|+||.||+|+.. .++..||+|.++.... +.....+.+|+.++++++||||+++++++..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNK-----KTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEEC-----CCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEE
Confidence 4778899999999999999864 3467899999864322 223456789999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||++ ++|.+++.... ....+++..+..++.||+.||+|||+.+++|+||||+|||++++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~-----------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~ 137 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLP-----------------KGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNK 137 (285)
T ss_pred EEEecCC-CCHHHHHhcCC-----------------CCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCC
Confidence 9999997 68999886221 22458899999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY- 602 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~- 602 (653)
+.+||+|||++....... .......++..|+|||.+.+. .++.++||||||+++|||++| .+||.+....+....
T Consensus 138 ~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg-~~~~~~~~~~~~~~~~ 214 (285)
T cd07861 138 GVIKLADFGLARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATK-KPLFHGDSEIDQLFRI 214 (285)
T ss_pred CcEEECcccceeecCCCc--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHH
Confidence 999999999987543221 112233557889999988754 578999999999999999996 457776554322211
Q ss_pred HHc---------------------------CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKE---------------------------GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~---------------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.. +........++.++.+++++||+.||.+|||+.+|+++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~ 284 (285)
T cd07861 215 FRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284 (285)
T ss_pred HHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCC
Confidence 110 0001112346788999999999999999999999998754
No 253
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.1e-36 Score=310.53 Aligned_cols=254 Identities=26% Similarity=0.359 Sum_probs=203.4
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc----ccHHHHHHHHHHHHHHhhCCCCccceEEeEEec-
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE----ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV- 439 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~----~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~- 439 (653)
.+|...+.||+|+||.||+|... .++..|++|.++.. ........+.+|+.++++++||||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDV-----DTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEc-----CCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC
Confidence 46788899999999999999864 35678999987632 122334578899999999999999999998865
Q ss_pred -CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 440 -GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 440 -~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
+...++++||+++++|.+++.. ...+++...+.++.|++.||+|||+.+|+|+||||+|
T Consensus 77 ~~~~~~l~~e~~~~~~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~n 136 (266)
T cd06651 77 AEKTLTIFMEYMPGGSVKDQLKA--------------------YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGAN 136 (266)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH
Confidence 3567899999999999999862 2347888899999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccc-cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
|++++++.+||+|||+++.+...... .......++..|+|||.+.+..++.++||||||+++|||++|. .||......
T Consensus 137 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~-~pf~~~~~~ 215 (266)
T cd06651 137 ILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEK-PPWAEYEAM 215 (266)
T ss_pred EEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCC-CCccccchH
Confidence 99999999999999998765321111 1112344678899999999989999999999999999999955 588766554
Q ss_pred HHHHHH-HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 598 EVVKYI-KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 598 e~~~~i-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.+..+ ........+...++.+.+++ .||..+|++||++++|++|.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~ 263 (266)
T cd06651 216 AAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPF 263 (266)
T ss_pred HHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcc
Confidence 433333 33333444556778888988 688889999999999998865
No 254
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.6e-36 Score=312.99 Aligned_cols=262 Identities=21% Similarity=0.366 Sum_probs=210.5
Q ss_pred cccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeE
Q psy5539 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGV 436 (653)
Q Consensus 358 ~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~ 436 (653)
..+.-+.++|.+.+.||+|+||.||+|... .+++.+|+|.+.... .....+.+|+.++.++ +||||++++++
T Consensus 15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~-----~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNK-----KDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred ccCCCCCCCeEEEEEeecCCCeEEEEEEEC-----CCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 344556788999999999999999999863 356789999986532 2345678899999999 89999999999
Q ss_pred EecC-----CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCcee
Q psy5539 437 CAVG-----KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVH 511 (653)
Q Consensus 437 ~~~~-----~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivH 511 (653)
+... ...++|+||+++|+|.++++... .....+++..++.++.|++.||+|||+.+++|
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~----------------~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 151 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLL----------------ICGQRLDEAMISYILYGALLGLQHLHNNRIIH 151 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhh----------------hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 8643 35899999999999999986321 12345789999999999999999999999999
Q ss_pred cCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-----CCCCchhHHHHHHHHHHHHhC
Q psy5539 512 RDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-----KYTVESDVWAFGVCLWEIFSF 586 (653)
Q Consensus 512 rDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----~~t~ksDVwSlGvvl~ellt~ 586 (653)
+||||+||++++++.+||+|||++........ ......++..|+|||.+... .++.++||||||+++|||++|
T Consensus 152 ~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g 229 (291)
T cd06639 152 RDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG 229 (291)
T ss_pred cCCCHHHEEEcCCCCEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence 99999999999999999999999876532221 11234567889999987654 368999999999999999995
Q ss_pred CCCCCCCCCHHHHHHHHHcCCcc--CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 587 ALQPYYGLTHEEVVKYIKEGNIL--QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 587 ~~~p~~~~~~~e~~~~i~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+||......+....+..+... ..++..+..+.+++.+||+.+|++||++.+|+++.|
T Consensus 230 -~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~ 289 (291)
T cd06639 230 -DPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPF 289 (291)
T ss_pred -CCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcc
Confidence 5688777665555555444322 234557788999999999999999999999998865
No 255
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-36 Score=324.37 Aligned_cols=250 Identities=25% Similarity=0.350 Sum_probs=198.4
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
....+|.+.+.||+|+||.||+|+..+ .+..||+|..... ....|+.++++++|+||+++++++..+.
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 130 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPG-----QPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSGA 130 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECC-----CCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeCC
Confidence 344579999999999999999998643 4578999986433 2346899999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++|+||+. ++|.+++.. ....+++..++.|+.||+.||.|||+++|+||||||+|||+
T Consensus 131 ~~~lv~e~~~-~~l~~~l~~-------------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill 190 (357)
T PHA03209 131 ITCMVLPHYS-SDLYTYLTK-------------------RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI 190 (357)
T ss_pred eeEEEEEccC-CcHHHHHHh-------------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 9999999995 689998862 23458899999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-----
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH----- 596 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~----- 596 (653)
++++.+||+|||+++..... .......+|..|+|||.+.+..++.++||||||+++|||++++.++|.....
T Consensus 191 ~~~~~~kl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~ 267 (357)
T PHA03209 191 NDVDQVCIGDLGAAQFPVVA---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEY 267 (357)
T ss_pred CCCCCEEEecCccccccccC---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHH
Confidence 99999999999999743211 1122345788999999999999999999999999999999987766654221
Q ss_pred -----HHHHHHHHcCCc--cCCC------------------------------CCCcHHHHHHHHHhhccCCCCCCCHHH
Q psy5539 597 -----EEVVKYIKEGNI--LQAP------------------------------DNTPDALYDLMKLCWNMKPMNRPSFRT 639 (653)
Q Consensus 597 -----~e~~~~i~~~~~--~~~~------------------------------~~~~~~l~~li~~cl~~dP~~RPs~~e 639 (653)
..+...+..... ...+ ..++.++.+||.+||+.||.+|||+.|
T Consensus 268 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e 347 (357)
T PHA03209 268 VKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEE 347 (357)
T ss_pred HHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHH
Confidence 111111111000 0000 134566778999999999999999999
Q ss_pred HHHHHHH
Q psy5539 640 IYQTLWN 646 (653)
Q Consensus 640 il~~L~~ 646 (653)
+++|.|-
T Consensus 348 ~l~hp~f 354 (357)
T PHA03209 348 ILNYPMF 354 (357)
T ss_pred HhcCchh
Confidence 9999874
No 256
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.2e-36 Score=306.83 Aligned_cols=254 Identities=28% Similarity=0.414 Sum_probs=217.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|++.+.||+|++|.||+|+.. .++..|+||.+...........+.+|+..+.+++|+||+++++++......+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~-----~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHK-----PTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEc-----CCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEE
Confidence 46788999999999999999864 3568899999887654455678999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCCEeEcC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVHRDLATRNCLIND 523 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivHrDLkp~NILl~~ 523 (653)
+|+||+++++|.+++.. ...+++..++.++.|++.||.|||+ .+++|+||+|+||++++
T Consensus 76 lv~e~~~~~~L~~~l~~--------------------~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~ 135 (264)
T cd06623 76 IVLEYMDGGSLADLLKK--------------------VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS 135 (264)
T ss_pred EEEEecCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC
Confidence 99999999999999962 1457899999999999999999999 99999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC---CHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL---THEEVV 600 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~---~~~e~~ 600 (653)
++.++|+|||++........ ......++..|+|||.+....++.++||||||+++|||++|. .||... ...+..
T Consensus 136 ~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~-~p~~~~~~~~~~~~~ 212 (264)
T cd06623 136 KGEVKIADFGISKVLENTLD--QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGK-FPFLPPGQPSFFELM 212 (264)
T ss_pred CCCEEEccCccceecccCCC--cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCC-CCCccccccCHHHHH
Confidence 99999999999876532221 112345678899999999999999999999999999999954 577665 556667
Q ss_pred HHHHcCCccCCCCC-CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDN-TPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
..+........+.. ++..+.+++.+||+.+|++||++.+++++.|-
T Consensus 213 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~ 259 (264)
T cd06623 213 QAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFI 259 (264)
T ss_pred HHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHH
Confidence 77776665556666 88999999999999999999999999998764
No 257
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.4e-36 Score=307.47 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=207.6
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc----cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA----SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~----~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
|+..+.||+|+||.||+|... .++..|++|.+.... .+...+.+.+|+.++++++|+||+++++++..+..
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 76 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNL-----DDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDN 76 (258)
T ss_pred ccccceeeecCCceEEEEEEc-----CCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCe
Confidence 456678999999999999863 356789999886432 23455678999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++++||+++++|.++++. ...+++..+..++.||+.||+|||+.+++|+||+|+||+++
T Consensus 77 ~~lv~e~~~~~~L~~~~~~--------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~ 136 (258)
T cd06632 77 LYIFLELVPGGSLAKLLKK--------------------YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD 136 (258)
T ss_pred EEEEEEecCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 9999999999999999862 23478889999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
+++.+||+|||++....... ......++..|++||.+.... ++.++|+||||+++|+|++|. .||......+...
T Consensus 137 ~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~-~pf~~~~~~~~~~ 212 (258)
T cd06632 137 TNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK-PPWSQLEGVAAVF 212 (258)
T ss_pred CCCCEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC-CCcccCcHHHHHH
Confidence 99999999999987653222 123445678899999988776 899999999999999999955 5876665544444
Q ss_pred HHHc-CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 602 YIKE-GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 602 ~i~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.. ......+..++..+.+++++||+.+|.+||++.+++++.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 257 (258)
T cd06632 213 KIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPF 257 (258)
T ss_pred HHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCC
Confidence 4433 4445566678899999999999999999999999998753
No 258
>KOG0660|consensus
Probab=100.00 E-value=4.4e-37 Score=310.22 Aligned_cols=253 Identities=24% Similarity=0.322 Sum_probs=200.3
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEec-----
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV----- 439 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~----- 439 (653)
.|..++.||+|+||.|.+|... .++..||||++... ......++-.||+++|+.++|+||+.+++++..
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~-----~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDK-----RTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred eecccccccCcceeeEEEEEEc-----CCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 4445788999999999999864 46689999999733 233445567899999999999999999999854
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
-...|+|+|+| ..||+..++ ....|+......++.|+++||.|+|+.+|+||||||+|+
T Consensus 98 f~DvYiV~elM-etDL~~iik--------------------~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNl 156 (359)
T KOG0660|consen 98 FNDVYLVFELM-ETDLHQIIK--------------------SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNL 156 (359)
T ss_pred cceeEEehhHH-hhHHHHHHH--------------------cCccccHHHHHHHHHHHHHhcchhhcccccccccchhhe
Confidence 45789999999 459999886 234488999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
|++.+..+||+|||+|+...........+....|-.|.|||.+.. ..||.+.||||.|||+.||++ +.+-|.|.+.-+
T Consensus 157 l~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~-gkplFpG~d~v~ 235 (359)
T KOG0660|consen 157 LLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLT-GKPLFPGKDYVH 235 (359)
T ss_pred eeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHc-CCCCCCCCchHH
Confidence 999999999999999997643211111244566888999998864 579999999999999999998 455777655333
Q ss_pred HHHH---------------HH---------c-CCccCC-----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 599 VVKY---------------IK---------E-GNILQA-----PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 599 ~~~~---------------i~---------~-~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.. |. . +..... -.+.++...+|+.+||..||.+|+|++|.++|+.
T Consensus 236 Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPY 312 (359)
T KOG0660|consen 236 QLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPY 312 (359)
T ss_pred HHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChh
Confidence 2222 22 1 111111 1356788999999999999999999999999874
No 259
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.3e-36 Score=311.03 Aligned_cols=254 Identities=25% Similarity=0.412 Sum_probs=201.8
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc---------HHHHHHHHHHHHHHhhCCCCccceEEeE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS---------EYLQTDFEREACLLAEFDHPNIVKLLGV 436 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~---------~~~~~~f~~Ei~il~~l~HpnIv~l~g~ 436 (653)
+|...+.||+|+||.||+|... .++..||+|.++.... ....+.+.+|+.+++.++|+||++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~-----~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 76 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNV-----TTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGF 76 (272)
T ss_pred ceeecceecccCceEEEEEeec-----CCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEE
Confidence 3567788999999999999853 3567899998753211 1123568889999999999999999999
Q ss_pred EecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 437 CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 437 ~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
+...+..++||||+++|+|.++++. ...+++..+..++.||+.||.|||+++++|+||+|
T Consensus 77 ~~~~~~~~lv~e~~~~~~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~ 136 (272)
T cd06629 77 ETTEEYLSIFLEYVPGGSIGSCLRT--------------------YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKA 136 (272)
T ss_pred eccCCceEEEEecCCCCcHHHHHhh--------------------ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCCh
Confidence 9999999999999999999999862 24578889999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCC--CCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFSFALQPYYGL 594 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~t~ksDVwSlGvvl~ellt~~~~p~~~~ 594 (653)
+||++++++.++|+|||+++...............++..|+|||.+.... ++.++||||||+++||+++| ..||...
T Consensus 137 ~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g-~~p~~~~ 215 (272)
T cd06629 137 DNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG-RRPWSDE 215 (272)
T ss_pred hhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhC-CCCCcCc
Confidence 99999999999999999987542211111122345678999999987654 88999999999999999995 4577655
Q ss_pred CHHHHHHHHH-cCCccCCC----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 595 THEEVVKYIK-EGNILQAP----DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 595 ~~~e~~~~i~-~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
...+....+. .......+ ..++..+.+++.+||..+|++||++++|+++.|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (272)
T cd06629 216 EAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271 (272)
T ss_pred chHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence 5443332222 22222222 245789999999999999999999999998864
No 260
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2e-36 Score=312.23 Aligned_cols=252 Identities=21% Similarity=0.407 Sum_probs=209.1
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC---CCccceEEeEEecCCc
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD---HPNIVKLLGVCAVGKP 442 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~---HpnIv~l~g~~~~~~~ 442 (653)
.|+..+.||+|+||.||+|... .++..||+|.++.........++.+|+.++++++ |||++++++++..+..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHV-----PTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEc-----CCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCE
Confidence 3567788999999999999863 3567899999876544445567889999999997 9999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++++|.++++. ..+++..++.++.|++.||.|||+.+++|+||+|+||+++
T Consensus 77 ~~lv~e~~~~~~L~~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~ 135 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKA---------------------GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT 135 (277)
T ss_pred EEEEEecCCCCcHHHHHHc---------------------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc
Confidence 9999999999999999861 2578999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
+++.++|+|||++....... .......++..|+|||.+..+ .++.++||||||+++|+|++| ..||.+........
T Consensus 136 ~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g-~~p~~~~~~~~~~~ 212 (277)
T cd06917 136 NTGNVKLCDFGVAALLNQNS--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATG-NPPYSDVDAFRAMM 212 (277)
T ss_pred CCCCEEEccCCceeecCCCc--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhC-CCCCCCCChhhhhh
Confidence 99999999999987654332 122334577889999988754 468999999999999999995 56888777665555
Q ss_pred HHHcCCccCCCC-CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 602 YIKEGNILQAPD-NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 602 ~i~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.+........+. ..+.++.+++.+||+.+|++||++.+++++.|-
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~ 258 (277)
T cd06917 213 LIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWI 258 (277)
T ss_pred ccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHh
Confidence 444433333333 378899999999999999999999999998765
No 261
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.4e-36 Score=312.82 Aligned_cols=253 Identities=22% Similarity=0.366 Sum_probs=203.2
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
++|++.+.||+|+||.||+|+.. .++..||+|++.... .....+.+.+|+.++++++|+||+++++++..+...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNR-----ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEE
Confidence 46888999999999999999864 356889999886432 222345678999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++++|..++. ....+++..++.++.|++.||+|||+.+++|+||||+||++++
T Consensus 76 ~~v~e~~~~~~l~~~~~--------------------~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~ 135 (286)
T cd07847 76 HLVFEYCDHTVLNELEK--------------------NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITK 135 (286)
T ss_pred EEEEeccCccHHHHHHh--------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcC
Confidence 99999999988887764 2235889999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
++.+||+|||++........ ......++..|+|||.+.+ ..++.++||||||+++|||++|. .||.+.+..+....
T Consensus 136 ~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~-~p~~~~~~~~~~~~ 212 (286)
T cd07847 136 QGQIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQ-PLWPGKSDVDQLYL 212 (286)
T ss_pred CCcEEECccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCC-CCCCCCChHHHHHH
Confidence 99999999999976533221 1123346778999999876 45789999999999999999964 68877665544333
Q ss_pred HHcC--C------------------ccCC----------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKEG--N------------------ILQA----------PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~~--~------------------~~~~----------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+... . ..+. .+..+..+.+|+.+||+.+|++||++.+++.+.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~ 285 (286)
T cd07847 213 IRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285 (286)
T ss_pred HHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCC
Confidence 2210 0 0000 1235678999999999999999999999998764
No 262
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.4e-36 Score=347.44 Aligned_cols=263 Identities=22% Similarity=0.375 Sum_probs=209.1
Q ss_pred ccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEe
Q psy5539 357 LEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLG 435 (653)
Q Consensus 357 l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g 435 (653)
+...+...++|.+++.||+|+||+||+|+.. ..+..||+|.+... ........|.+|+.+++.|+|||||++++
T Consensus 5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk-----~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d 79 (1021)
T PTZ00266 5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHK-----RTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYID 79 (1021)
T ss_pred ccCCccccCCEEEEEEEecCCCeEEEEEEEC-----CCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEE
Confidence 3444566679999999999999999999864 35678999988643 23344567899999999999999999999
Q ss_pred EEec--CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC------
Q psy5539 436 VCAV--GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR------ 507 (653)
Q Consensus 436 ~~~~--~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~------ 507 (653)
++.. ...++|||||+++|+|.++|.... .....+++..++.|+.||+.||.|||+.
T Consensus 80 ~f~de~~~~lyIVMEY~~gGSL~~lL~k~~----------------~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~ 143 (1021)
T PTZ00266 80 RFLNKANQKLYILMEFCDAGDLSRNIQKCY----------------KMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNG 143 (1021)
T ss_pred EEEecCCCEEEEEEeCCCCCcHHHHHHHHh----------------hccCCCCHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 8854 456899999999999999997321 1224689999999999999999999984
Q ss_pred -CceecCCCCCCEeEcC-----------------CCcEEEeccCccccccccccccCCCCCCCccccccchhhcc--CCC
Q psy5539 508 -KFVHRDLATRNCLIND-----------------QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY--NKY 567 (653)
Q Consensus 508 -~ivHrDLkp~NILl~~-----------------~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~ 567 (653)
+||||||||+||||+. .+.+||+|||++..+.... ......+|+.|+|||.+.+ ..+
T Consensus 144 k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~ 220 (1021)
T PTZ00266 144 ERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSY 220 (1021)
T ss_pred CCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCC
Confidence 5999999999999964 3458999999997653221 1233467899999999864 458
Q ss_pred CCchhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 568 TVESDVWAFGVCLWEIFSFALQPYYGLT-HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 568 t~ksDVwSlGvvl~ellt~~~~p~~~~~-~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.++|||||||+||||++|. .||...+ ..+++..+..+... .....+.++.+||..||+.+|.+||++.+++.+.+
T Consensus 221 s~KSDVWSLG~ILYELLTGk-~PF~~~~~~~qli~~lk~~p~l-pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ 297 (1021)
T PTZ00266 221 DDKSDMWALGCIIYELCSGK-TPFHKANNFSQLISELKRGPDL-PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQI 297 (1021)
T ss_pred CchhHHHHHHHHHHHHHHCC-CCCCcCCcHHHHHHHHhcCCCC-CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHH
Confidence 89999999999999999955 5776544 44555555554322 22356889999999999999999999999997755
No 263
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-36 Score=316.92 Aligned_cols=253 Identities=22% Similarity=0.366 Sum_probs=208.3
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
..+|.+.+.||+|+||.||+|... .++..||+|.+...... ..+.+.+|+.+++.++|+||+++++++..++..
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDI-----ATGQEVAIKQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDEL 91 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEEC-----CCCCEEEEEEEecCccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEE
Confidence 357889999999999999999853 35678999998754333 345688999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++++|.+++.. ..+++.++..++.|++.||.|||+.+++||||||+|||++.
T Consensus 92 ~lv~e~~~~~~L~~~~~~---------------------~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~ 150 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE---------------------TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM 150 (297)
T ss_pred EEeecccCCCCHHHHHHh---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence 999999999999999851 24688899999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.++|+|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++|. +||.+.+..+....+
T Consensus 151 ~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~-~pf~~~~~~~~~~~~ 227 (297)
T cd06656 151 DGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE-PPYLNENPLRALYLI 227 (297)
T ss_pred CCCEEECcCccceEccCCcc--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCC-CCCCCCCcchheeee
Confidence 99999999999876432221 122345678899999999989999999999999999999954 588665543332222
Q ss_pred HcCC--ccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 604 KEGN--ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 604 ~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.... ....+...+..+.+++.+||..+|++||++++|+++.|-
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (297)
T cd06656 228 ATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 272 (297)
T ss_pred ccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchh
Confidence 2211 123455678899999999999999999999999998764
No 264
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.2e-36 Score=307.98 Aligned_cols=254 Identities=24% Similarity=0.330 Sum_probs=203.4
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc----ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE----ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~----~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
++|.+.+.||+|+||.||+|... .++..||||.+... ......+.+.+|+.++++++||||+++++++...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDA-----DTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEc-----CCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC
Confidence 47888999999999999999863 35678999987532 1123346788999999999999999999988653
Q ss_pred --CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 441 --KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 441 --~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
...+++|||+++++|.+++.. ...+++...++++.|++.||+|||+.+++|+||||+|
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~n 136 (265)
T cd06652 77 MERTLSIFMEHMPGGSIKDQLKS--------------------YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGAN 136 (265)
T ss_pred CCceEEEEEEecCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence 467899999999999999862 1346788899999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccc-cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
||+++++.++|+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++|. +||......
T Consensus 137 il~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~-~p~~~~~~~ 215 (265)
T cd06652 137 ILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEK-PPWAEFEAM 215 (265)
T ss_pred EEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCC-CCCCccchH
Confidence 99999999999999998765321111 1122334678899999999889999999999999999999955 587766544
Q ss_pred HHHHHHHc-CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 598 EVVKYIKE-GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 598 e~~~~i~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..+..+.. ......+...+..+.+++++|+. +|.+||++++|+++.|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~ 263 (265)
T cd06652 216 AAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTF 263 (265)
T ss_pred HHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcc
Confidence 44433332 22333455677889999999995 8999999999998765
No 265
>KOG0610|consensus
Probab=100.00 E-value=9.2e-37 Score=311.38 Aligned_cols=260 Identities=22% Similarity=0.325 Sum_probs=217.3
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEe
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCA 438 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~ 438 (653)
.+..++|++++.||.|.-|+||++++.+ +...+|+|++..+.. .....+.+.|-+||+.++||.++.||+.++
T Consensus 73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~-----t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe 147 (459)
T KOG0610|consen 73 SLGLRHFRLLKRLGCGDIGTVYLVELRG-----TNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE 147 (459)
T ss_pred ccCHHHHHHHHHcCCCCceeEEEEEecC-----CCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee
Confidence 4455678889999999999999999865 348899999976533 333446778999999999999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
..+..||+|||++||||+..+++ +....+++..+..++.+|+.||+|||-.|||.|||||+|
T Consensus 148 t~~~~cl~meyCpGGdL~~Lrqk------------------Qp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPEN 209 (459)
T KOG0610|consen 148 TDKYSCLVMEYCPGGDLHSLRQK------------------QPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPEN 209 (459)
T ss_pred ccceeEEEEecCCCccHHHHHhh------------------CCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcce
Confidence 99999999999999999998762 234568999999999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCccccccc---------------------------------cccc---------------------
Q psy5539 519 CLINDQMVVKIADFGLSRKMYL---------------------------------QDYY--------------------- 544 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~---------------------------------~~~~--------------------- 544 (653)
|||-++|++-|+||.|+..... .+..
T Consensus 210 ILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~ 289 (459)
T KOG0610|consen 210 ILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTG 289 (459)
T ss_pred eEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCC
Confidence 9999999999999999743310 0000
Q ss_pred cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccCCCC--CCcHHHHHH
Q psy5539 545 KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPD--NTPDALYDL 622 (653)
Q Consensus 545 ~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~~~~--~~~~~l~~l 622 (653)
.......||-.|.|||++.+...+.++|.|+|||+||||+. |..||.|.+..+.+..|..... .+|+ .++..+++|
T Consensus 290 ~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLy-G~TPFKG~~~~~Tl~NIv~~~l-~Fp~~~~vs~~akDL 367 (459)
T KOG0610|consen 290 ARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLY-GTTPFKGSNNKETLRNIVGQPL-KFPEEPEVSSAAKDL 367 (459)
T ss_pred ccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHh-CCCCcCCCCchhhHHHHhcCCC-cCCCCCcchhHHHHH
Confidence 00112346778999999999999999999999999999997 5569999999988888776543 3333 577899999
Q ss_pred HHHhhccCCCCCCC----HHHHHHHHH
Q psy5539 623 MKLCWNMKPMNRPS----FRTIYQTLW 645 (653)
Q Consensus 623 i~~cl~~dP~~RPs----~~eil~~L~ 645 (653)
|++.|.+||++|.. +.||.+|.+
T Consensus 368 Ir~LLvKdP~kRlg~~rGA~eIK~HpF 394 (459)
T KOG0610|consen 368 IRKLLVKDPSKRLGSKRGAAEIKRHPF 394 (459)
T ss_pred HHHHhccChhhhhccccchHHhhcCcc
Confidence 99999999999997 899998874
No 266
>KOG0658|consensus
Probab=100.00 E-value=3.2e-37 Score=311.72 Aligned_cols=249 Identities=24% Similarity=0.352 Sum_probs=195.5
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC----
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK---- 441 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~---- 441 (653)
.|...+.+|.|+||.||+|.+.. +...||||+.-.+.. .-.+|+++|+.++|||||+|+-++....
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e-----~~~~vAIKKv~~d~r-----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~ 94 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRE-----TEEEVAIKKVLQDKR-----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDE 94 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcC-----CCceeEEEEecCCCC-----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCch
Confidence 46678889999999999999753 367899998865432 1257999999999999999998875422
Q ss_pred -ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 442 -PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 442 -~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...||||||+. +|.++++... .....++...+.-+..||.+||.|||+.+|+||||||+|+|
T Consensus 95 ~~lnlVleymP~-tL~~~~r~~~----------------~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlL 157 (364)
T KOG0658|consen 95 VYLNLVLEYMPE-TLYRVIRHYT----------------RANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLL 157 (364)
T ss_pred hHHHHHHHhchH-HHHHHHHHHh----------------hcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEE
Confidence 45789999987 9999998432 22356777888899999999999999999999999999999
Q ss_pred EcCC-CcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 521 INDQ-MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 521 l~~~-~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
+|.+ |.+||+|||.|+.+.... .+....-|-.|.|||.+.+. .||.+.||||.|||+.||+- |.+-|.|.+..+
T Consensus 158 vD~~tg~LKicDFGSAK~L~~~e---pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~-g~plFpG~s~~d 233 (364)
T KOG0658|consen 158 VDPDTGVLKICDFGSAKVLVKGE---PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLK-GQPLFPGDSSVD 233 (364)
T ss_pred EcCCCCeEEeccCCcceeeccCC---CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhc-CCcccCCCCHHH
Confidence 9966 999999999998763222 22233446679999999875 79999999999999999998 445777766544
Q ss_pred HHHHHHc------------C----------CccC------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 599 VVKYIKE------------G----------NILQ------APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 599 ~~~~i~~------------~----------~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+..|.. . ++.. .....+++..+|+.+++..+|.+|.++.+++.|.+
T Consensus 234 QL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~f 308 (364)
T KOG0658|consen 234 QLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPF 308 (364)
T ss_pred HHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchh
Confidence 3332211 0 0000 12346789999999999999999999999998764
No 267
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.3e-36 Score=310.33 Aligned_cols=256 Identities=25% Similarity=0.381 Sum_probs=208.3
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec--CCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV--GKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~--~~~ 442 (653)
++|...+.||.|++|.||+|... ..+..+|+|.+...........+.+|++++++++||||+++++++.. ...
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 75 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLK-----NTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSS 75 (287)
T ss_pred CceEEEEEeccCCceEEEEEEEC-----CCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCe
Confidence 46889999999999999999974 35688999999765554556779999999999999999999998864 346
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++++|.+++.... .....++...+..++.||+.||.|||+.+++|+||+|+||+++
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~----------------~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~ 139 (287)
T cd06621 76 IGIAMEYCEGGSLDSIYKKVK----------------KRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT 139 (287)
T ss_pred EEEEEEecCCCCHHHHHHHHH----------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe
Confidence 899999999999999886322 1234578889999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-----CHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL-----THE 597 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~-----~~~ 597 (653)
+++.++|+|||++....... .....++..|+|||.+.+..++.++||||||+++|||++|.. ||... ...
T Consensus 140 ~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~-p~~~~~~~~~~~~ 214 (287)
T cd06621 140 RKGQVKLCDFGVSGELVNSL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRF-PFPPEGEPPLGPI 214 (287)
T ss_pred cCCeEEEeeccccccccccc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCC-CCCcccCCCCChH
Confidence 99999999999986543211 123345778999999999999999999999999999999665 66544 334
Q ss_pred HHHHHHHcCCccCCC------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 598 EVVKYIKEGNILQAP------DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 598 e~~~~i~~~~~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+....+........+ ...++.+.+++.+||+.+|++|||+.+|+++.|-
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 215 ELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred HHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 555555543322222 1245789999999999999999999999998874
No 268
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.1e-36 Score=315.76 Aligned_cols=258 Identities=22% Similarity=0.285 Sum_probs=211.4
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH--HHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE--YLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~--~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|+..+.||+|+||.||+|...+ ++..+|+|.+...... ...+.+.+|+++++.++|+||+++++.+..+..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKG-----TGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcC-----CCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCE
Confidence 368889999999999999998642 5678999998754322 245578899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+.+++|.+++... ....+++..+..++.|++.||+|||+.+++|+||||+||+++
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~------------------~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~ 137 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQ------------------PGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH 137 (316)
T ss_pred EEEEEEecCCCCHHHHHHhC------------------CCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc
Confidence 99999999999999998621 124578999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCcccccccccccc---------------------------CCCCCCCccccccchhhccCCCCCchhHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYK---------------------------GDENDAIPVRWMPLESILYNKYTVESDVWA 575 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~---------------------------~~~~~~~t~~y~aPE~~~~~~~t~ksDVwS 575 (653)
+++.++|+|||++.......... ......++..|+|||.+.+..++.++||||
T Consensus 138 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~s 217 (316)
T cd05574 138 ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWT 217 (316)
T ss_pred CCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHH
Confidence 99999999999986542211100 011234677899999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcc-CCCCCCcHHHHHHHHHhhccCCCCCCC----HHHHHHHHHH
Q psy5539 576 FGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNIL-QAPDNTPDALYDLMKLCWNMKPMNRPS----FRTIYQTLWN 646 (653)
Q Consensus 576 lGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs----~~eil~~L~~ 646 (653)
||+++|+|++| ..||.+.+..+....+...... ......+..+.+++.+||+.+|++||+ +.+++++.|-
T Consensus 218 lG~ll~~l~~g-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~ 292 (316)
T cd05574 218 LGILLYEMLYG-TTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF 292 (316)
T ss_pred HHHHHHHHhhC-CCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchh
Confidence 99999999994 5588888777666655544322 122236899999999999999999999 9999988653
No 269
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.7e-36 Score=311.14 Aligned_cols=258 Identities=25% Similarity=0.355 Sum_probs=203.1
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHH-HhhCCCCccceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACL-LAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~i-l~~l~HpnIv~l~g~~~~~~~~ 443 (653)
++|++.+.||+|+||.||+|+.. .++..||+|+++.........++..|+.+ ++.++||||+++++++..++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHV-----PTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEc-----CCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcE
Confidence 46889999999999999999864 45789999998765433334455666665 6667999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCCEeEc
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLIN 522 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-~ivHrDLkp~NILl~ 522 (653)
+++|||++ |+|.++++... .....+++..++.++.||+.||+|||++ +++||||||+|||++
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~----------------~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~ 138 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVY----------------DKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN 138 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhc----------------cCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC
Confidence 99999996 68998886321 1224689999999999999999999997 999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc----CCCCCchhHHHHHHHHHHHHhCCCCCCCCC-CHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY----NKYTVESDVWAFGVCLWEIFSFALQPYYGL-THE 597 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~----~~~t~ksDVwSlGvvl~ellt~~~~p~~~~-~~~ 597 (653)
+++.+||+|||+++..... .......++..|+|||.+.+ ..++.++|+||||+++|||++|. .||... ...
T Consensus 139 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~-~p~~~~~~~~ 214 (283)
T cd06617 139 RNGQVKLCDFGISGYLVDS---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGR-FPYDSWKTPF 214 (283)
T ss_pred CCCCEEEeecccccccccc---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCC-CCCCccccCH
Confidence 9999999999998764221 11223456778999998865 45689999999999999999955 477542 222
Q ss_pred HHHHHHHcCCccCCC-CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 598 EVVKYIKEGNILQAP-DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 598 e~~~~i~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
+....+..+.....+ +.++.++.+++.+||..+|.+||++.+|+++.|-..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 266 (283)
T cd06617 215 QQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL 266 (283)
T ss_pred HHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence 333333343333333 357899999999999999999999999999877544
No 270
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=7.3e-36 Score=305.28 Aligned_cols=254 Identities=24% Similarity=0.397 Sum_probs=208.4
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|++.+.||+|+||.||+|... .++..|++|.++.... ....+.+.+|+.++++++|+||+++++++...+..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNL-----DTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEEC-----CCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEE
Confidence 4678899999999999999863 3467899999875433 245678999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+|+||+++++|.+++.. ...+++..+..++.|++.||.|||+.+++|+||+|+||+++++
T Consensus 76 lv~e~~~~~~L~~~~~~--------------------~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~ 135 (264)
T cd06626 76 IFMEYCSGGTLEELLEH--------------------GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHN 135 (264)
T ss_pred EEEecCCCCcHHHHHhh--------------------cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 99999999999999862 2346788899999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCC--CCCCCccccccchhhccCC---CCCchhHHHHHHHHHHHHhCCCCCCCCC-CHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGD--ENDAIPVRWMPLESILYNK---YTVESDVWAFGVCLWEIFSFALQPYYGL-THEE 598 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~---~t~ksDVwSlGvvl~ellt~~~~p~~~~-~~~e 598 (653)
+.+||+|||++............ ....++..|+|||.+.... .+.++||||||+++||+++|. .||... ....
T Consensus 136 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~-~pf~~~~~~~~ 214 (264)
T cd06626 136 GVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGK-RPWSELDNEFQ 214 (264)
T ss_pred CCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCC-CCccCCcchHH
Confidence 99999999999776433321111 1345678999999998776 899999999999999999955 578655 3344
Q ss_pred HHHHHHcCCccCCCCC--CcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 599 VVKYIKEGNILQAPDN--TPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 599 ~~~~i~~~~~~~~~~~--~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
....+..+.....+.. ++..+.+++.+||+.+|.+||++.+++.+.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~ 263 (264)
T cd06626 215 IMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263 (264)
T ss_pred HHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 4444444444444444 4889999999999999999999999988754
No 271
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=4.5e-36 Score=310.77 Aligned_cols=253 Identities=26% Similarity=0.325 Sum_probs=204.7
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|++.+.||+|+||.||+|+.. .++..||+|.++.... ......+.+|+.++++++||||+++++++..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDR-----ETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEEC-----CCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeE
Confidence 4678899999999999999864 3467899999875432 334567899999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+|+||+ +++|.+++... ...+++.+++.++.||+.||+|||+.+++|+||||+||+++++
T Consensus 76 ~v~e~~-~~~L~~~~~~~-------------------~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~ 135 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDE-------------------ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISAD 135 (286)
T ss_pred EEeccc-CCCHHHHHHhc-------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCC
Confidence 999999 99999998621 2458899999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
+.++|+|||++........ .......++..|+|||.+.+. .++.++||||||+++|||++| .++|.+....+....+
T Consensus 136 ~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg-~~~~~~~~~~~~~~~~ 213 (286)
T cd07832 136 GVLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNG-SPLFPGENDIEQLAIV 213 (286)
T ss_pred CcEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcC-CcCcCCCCHHHHHHHH
Confidence 9999999999976533221 112334578889999988755 468999999999999999997 6677666554443332
Q ss_pred HcCC---------------------cc--------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 604 KEGN---------------------IL--------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 604 ~~~~---------------------~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.... .. ......+..+.+++++|++.+|++||+++++++|.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~ 284 (286)
T cd07832 214 FRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284 (286)
T ss_pred HHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcC
Confidence 2210 00 011245688999999999999999999999999875
No 272
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=5.1e-36 Score=306.67 Aligned_cols=245 Identities=27% Similarity=0.353 Sum_probs=207.3
Q ss_pred ecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 373 LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
||.|+||.||+|+.. ..+..+|+|.+.... .....+.+.+|+.+++.++||||+++++++..+...++|+||+
T Consensus 1 lg~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVK-----SKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEEC-----CCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecC
Confidence 699999999999974 356789999986543 2234567999999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++++|.+++.. ...+++..+..++.||+.||.|||+.+++|+||+|+||++++++.++|+
T Consensus 76 ~~~~L~~~l~~--------------------~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~ 135 (262)
T cd05572 76 LGGELWTILRD--------------------RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLV 135 (262)
T ss_pred CCCcHHHHHhh--------------------cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEe
Confidence 99999999962 2347888999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHc-CC
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT--HEEVVKYIKE-GN 607 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~--~~e~~~~i~~-~~ 607 (653)
|||++....... ......++..|++||.+....++.++|+||||+++|||++| .+||.... ..++...+.. ..
T Consensus 136 df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~ 211 (262)
T cd05572 136 DFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTG-RPPFGEDDEDPMEIYNDILKGNG 211 (262)
T ss_pred eCCcccccCccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhC-CCCcCCCCCCHHHHHHHHhccCC
Confidence 999997653321 12233567789999999888999999999999999999995 55887766 6666666654 33
Q ss_pred ccCCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHHHHH
Q psy5539 608 ILQAPDNTPDALYDLMKLCWNMKPMNRPS-----FRTIYQTLWN 646 (653)
Q Consensus 608 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~L~~ 646 (653)
....+...+.++.++|.+||+.+|++||+ +++++++.|-
T Consensus 212 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~ 255 (262)
T cd05572 212 KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWF 255 (262)
T ss_pred CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhh
Confidence 45566677899999999999999999999 9999998874
No 273
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.2e-36 Score=305.76 Aligned_cols=254 Identities=24% Similarity=0.421 Sum_probs=212.1
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|.+.+.||+|+||.||+|... .++..+|+|.+.... .....+.+.+|+.+++.++|+||+++++.+......+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAK-----SDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEc-----CCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEE
Confidence 4678899999999999999864 356779999986532 1223456889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+|+||+++++|.+++... ....+++..+..++.|++.||.|||+.+++|+||||+||+++++
T Consensus 76 lv~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~ 137 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQ------------------RGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKN 137 (257)
T ss_pred EEEecCCCCcHHHHHHhc------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCC
Confidence 999999999999998621 12347899999999999999999999999999999999999988
Q ss_pred C-cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 525 M-VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 525 ~-~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
+ .+||+|||.+....... .......++..|+|||.+....++.++||||||+++|||++|. .||...+..+....+
T Consensus 138 ~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~-~p~~~~~~~~~~~~~ 214 (257)
T cd08225 138 GMVAKLGDFGIARQLNDSM--ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLK-HPFEGNNLHQLVLKI 214 (257)
T ss_pred CCeEEecccccchhccCCc--ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCC-CCCCCccHHHHHHHH
Confidence 5 56999999987653221 1112345778899999998889999999999999999999955 588777777777666
Q ss_pred HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..+.....+...+.++.+++.+||..+|++|||+.+|+++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~ 256 (257)
T cd08225 215 CQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPF 256 (257)
T ss_pred hcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCC
Confidence 666665566678899999999999999999999999998765
No 274
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=8.1e-36 Score=306.40 Aligned_cols=256 Identities=21% Similarity=0.392 Sum_probs=210.7
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc---------ccHHHHHHHHHHHHHHhh-CCCCccceEEe
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE---------ASEYLQTDFEREACLLAE-FDHPNIVKLLG 435 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~---------~~~~~~~~f~~Ei~il~~-l~HpnIv~l~g 435 (653)
+|.+.+.||+|+||.||+|.+.+ ..+..+|+|.+... .......++.+|+.++.+ ++||||+++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~----~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~ 76 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKN----NGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYK 76 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcC----CCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEe
Confidence 35677889999999999999743 24578999987532 122334567788888875 79999999999
Q ss_pred EEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceecCC
Q psy5539 436 VCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVHRDL 514 (653)
Q Consensus 436 ~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivHrDL 514 (653)
++..++..++||||+++++|.+++.... .....+++..++.++.|++.||.|||+ .+++|+||
T Consensus 77 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~----------------~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl 140 (269)
T cd08528 77 TFLENDRLYIVMDLIEGAPLGEHFNSLK----------------EKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDL 140 (269)
T ss_pred eEccCCeEEEEEecCCCCcHHHHHHHHH----------------hccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCC
Confidence 9999999999999999999999986321 123458889999999999999999996 68999999
Q ss_pred CCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594 (653)
Q Consensus 515 kp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~ 594 (653)
+|+|||+++++.+||+|||++....... ......++..|+|||.+.+..++.++||||||+++|||++| .+||...
T Consensus 141 ~~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g-~~p~~~~ 216 (269)
T cd08528 141 TPNNIMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTL-QPPFYST 216 (269)
T ss_pred CHHHEEECCCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhC-CCccccc
Confidence 9999999999999999999997653322 22344567889999999998999999999999999999996 5688877
Q ss_pred CHHHHHHHHHcCCccCCCC-CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 595 THEEVVKYIKEGNILQAPD-NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 595 ~~~e~~~~i~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
........+..+...+.+. ..+..+.+++.+||+.||++||++.++..++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 217 NMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 7777777777665544443 57889999999999999999999999988764
No 275
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.4e-36 Score=311.61 Aligned_cols=259 Identities=22% Similarity=0.362 Sum_probs=205.1
Q ss_pred ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEE
Q psy5539 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVC 437 (653)
Q Consensus 359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~ 437 (653)
.+..+.+.|++.+.||+|+||.||+|+.. ..+..+|+|.+.... ....++..|+.++.++ +|+||+++++++
T Consensus 10 ~~~~~~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 10 ALRDPAGIFELVEVVGNGTYGQVYKGRHV-----KTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhcChhhhhhhheeeccCCCeEEEEEEEc-----CCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 33445678889999999999999999864 355789999885432 2345688999999998 799999999998
Q ss_pred ec------CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCcee
Q psy5539 438 AV------GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVH 511 (653)
Q Consensus 438 ~~------~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivH 511 (653)
.. ....+++|||+++|+|.+++... ....+++..++.++.||+.||.|||+.+|+|
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~------------------~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH 144 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNT------------------KGNALKEDWIAYICREILRGLAHLHAHKVIH 144 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHc------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 53 45789999999999999998632 1234778889999999999999999999999
Q ss_pred cCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhc-----cCCCCCchhHHHHHHHHHHHHhC
Q psy5539 512 RDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSF 586 (653)
Q Consensus 512 rDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~t~ksDVwSlGvvl~ellt~ 586 (653)
+||+|+||++++++.++|+|||++....... .......++..|+|||.+. ...++.++||||||+++|||++|
T Consensus 145 ~dl~~~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g 222 (282)
T cd06636 145 RDIKGQNVLLTENAEVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 222 (282)
T ss_pred CCCCHHHEEECCCCCEEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhC
Confidence 9999999999999999999999987542211 1223345678899999876 34688899999999999999996
Q ss_pred CCCCCCCCCHHHHHHHHHcCCc-cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 587 ALQPYYGLTHEEVVKYIKEGNI-LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 587 ~~~p~~~~~~~e~~~~i~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
. +||......+....+..... ......++.++.++|++||+.+|.+||++.+|+++.|
T Consensus 223 ~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~ 281 (282)
T cd06636 223 A-PPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPF 281 (282)
T ss_pred C-CCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCC
Confidence 5 57766655443333333222 2223457899999999999999999999999998764
No 276
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.5e-36 Score=322.12 Aligned_cols=250 Identities=23% Similarity=0.287 Sum_probs=198.5
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecC---
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--- 440 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--- 440 (653)
++|.+.+.||+|+||.||+|... .++..||||.++.... ......+.+|+.++++++||||+++++++...
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDT-----RLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred hhhhhheecccCCCeEEEEEEEC-----CCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 57888999999999999999863 3567899999875422 22345677899999999999999999887532
Q ss_pred ---CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 441 ---KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 441 ---~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
...++++|++ +++|.++++ ...+++..+..++.||+.||+|||+++|+||||||+
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~ 147 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVK---------------------CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPS 147 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHh---------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChh
Confidence 4578999987 779988774 134889999999999999999999999999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
|||+++++.+||+|||+++.... ......++..|+|||.+.+ ..++.++||||||+++|||++|. .||.+.+.
T Consensus 148 Nil~~~~~~~kl~Dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~-~pf~~~~~ 221 (343)
T cd07878 148 NVAVNEDCELRILDFGLARQADD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK-ALFPGNDY 221 (343)
T ss_pred hEEECCCCCEEEcCCccceecCC-----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCC-CCCCCCCH
Confidence 99999999999999999976422 1233457889999999876 56899999999999999999954 58876655
Q ss_pred HHHHHHHHcCC----------------------ccCC--------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 597 EEVVKYIKEGN----------------------ILQA--------PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 597 ~e~~~~i~~~~----------------------~~~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.+.+..+.... .... ....++.+.+|+.+|++.||.+|||+.++++|.|-
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~ 301 (343)
T cd07878 222 IDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYF 301 (343)
T ss_pred HHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcch
Confidence 44333332110 0000 11345668899999999999999999999999875
Q ss_pred H
Q psy5539 647 I 647 (653)
Q Consensus 647 l 647 (653)
.
T Consensus 302 ~ 302 (343)
T cd07878 302 S 302 (343)
T ss_pred h
Confidence 4
No 277
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.7e-36 Score=314.77 Aligned_cols=252 Identities=19% Similarity=0.360 Sum_probs=207.2
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
.+.....||+|+||.||++... .++..||||.+.... ....+.+.+|+.+++.++|+||+++++.+..++..++
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~l 96 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEK-----HTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWV 96 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEEC-----CCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEE
Confidence 3444567999999999999853 346789999986543 3345568899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
||||+++++|.+++. ...+++..+..++.||+.||+|||+++|+||||||+||++++++
T Consensus 97 v~e~~~~~~L~~~~~---------------------~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~ 155 (292)
T cd06658 97 VMEFLEGGALTDIVT---------------------HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG 155 (292)
T ss_pred EEeCCCCCcHHHHHh---------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC
Confidence 999999999999875 12478889999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~ 605 (653)
.++|+|||++....... .......++..|+|||.+....++.++||||||+++|||++|. .||.+.+..+.+..+..
T Consensus 156 ~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~-~p~~~~~~~~~~~~~~~ 232 (292)
T cd06658 156 RIKLSDFGFCAQVSKEV--PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE-PPYFNEPPLQAMRRIRD 232 (292)
T ss_pred CEEEccCcchhhccccc--ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHh
Confidence 99999999987542211 1122345678899999998889999999999999999999955 58877777666665554
Q ss_pred CCcc--CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 606 GNIL--QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 606 ~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
.... ......+..+.+++.+||..+|.+|||+++++++.|-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~ 276 (292)
T cd06658 233 NLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLK 276 (292)
T ss_pred cCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhh
Confidence 3221 22235678899999999999999999999999987643
No 278
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3.3e-36 Score=311.93 Aligned_cols=253 Identities=23% Similarity=0.375 Sum_probs=202.0
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
++|++.+.||+|+||.||+|... ..++.||+|++..... ....+.+.+|+++++.++||||+++++++..+...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHK-----ETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEEC-----CCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeE
Confidence 46888999999999999999864 2457899998865322 23456788999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++|+||+++++|.++.. ....+++..++.++.||+.||+|||+.+++|+||+|+||++++
T Consensus 76 ~lv~e~~~~~~l~~~~~--------------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~ 135 (286)
T cd07846 76 YLVFEFVDHTVLDDLEK--------------------YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ 135 (286)
T ss_pred EEEEecCCccHHHHHHh--------------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC
Confidence 99999999998888764 1234789999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
++.++|+|||++....... .......++..|+|||.+.+. .++.++||||||+++|||++| .+||...+..+....
T Consensus 136 ~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g-~~~~~~~~~~~~~~~ 212 (286)
T cd07846 136 SGVVKLCDFGFARTLAAPG--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTG-EPLFPGDSDIDQLYH 212 (286)
T ss_pred CCcEEEEeeeeeeeccCCc--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcC-CCCCCCCchHHHHHH
Confidence 9999999999987653322 112233467889999998754 578899999999999999996 467765554333222
Q ss_pred HHc--------------------CC-cc---------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKE--------------------GN-IL---------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~--------------------~~-~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.. +. .. .....++..+.+++.+||+.+|++||++.+|+++.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 285 (286)
T cd07846 213 IIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285 (286)
T ss_pred HHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCC
Confidence 211 00 00 012356788999999999999999999999998754
No 279
>KOG0599|consensus
Probab=100.00 E-value=5.2e-37 Score=296.89 Aligned_cols=253 Identities=25% Similarity=0.374 Sum_probs=213.9
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-------ccHHHHHHHHHHHHHHhhC-CCCccceEEeEEe
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-------ASEYLQTDFEREACLLAEF-DHPNIVKLLGVCA 438 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-------~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~ 438 (653)
|.-.+.||.|..++|-++.. ..++...|+|++... ......+.-.+|+.||+++ .||+|+++.++++
T Consensus 19 y~pkeilgrgvss~vrRci~-----k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 19 YEPKEILGRGVSSVVRRCIH-----KETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred cChHHHhcccchhhhhhhhh-----cccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 44456789999999988764 346677888877422 2234455667899999998 6999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
....+++|+|.|+.|.|.|||. ..-.++++...+|++|+..|+.|||.++||||||||+|
T Consensus 94 s~sF~FlVFdl~prGELFDyLt--------------------s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpEN 153 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLT--------------------SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPEN 153 (411)
T ss_pred CcchhhhhhhhcccchHHHHhh--------------------hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhh
Confidence 9999999999999999999996 23568999999999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC------CCCCchhHHHHHHHHHHHHhCCCCCCC
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN------KYTVESDVWAFGVCLWEIFSFALQPYY 592 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~------~~t~ksDVwSlGvvl~ellt~~~~p~~ 592 (653)
||+|+++++||+|||.|..+..... -....||++|.|||.+.-. .|+.+.|+||.||+||-|+. |.+||+
T Consensus 154 ILlddn~~i~isDFGFa~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLa-GcpPFw 229 (411)
T KOG0599|consen 154 ILLDDNMNIKISDFGFACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLA-GCPPFW 229 (411)
T ss_pred eeeccccceEEeccceeeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHc-CCCchh
Confidence 9999999999999999987643332 2345789999999988643 58899999999999999998 557998
Q ss_pred CCCHHHHHHHHHcCCccCCC---CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 593 GLTHEEVVKYIKEGNILQAP---DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 593 ~~~~~e~~~~i~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
....--++..|.+|+..... .++++..++|+.+|++.||++|.|++|.+.|+|.++
T Consensus 230 HRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 230 HRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred HHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 87777788899999875443 357789999999999999999999999999998754
No 280
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3e-36 Score=307.63 Aligned_cols=249 Identities=21% Similarity=0.324 Sum_probs=209.4
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
+|++.+.||+|+||.||+|+.. .++..||+|.+.... .....+.+.+|++++++++||||+++++.+..+...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKR-----DTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEc-----cCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeE
Confidence 4788999999999999999863 356789999987532 223456899999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++|+||+.+++|.+++.. ...+++..+..++.|+++||.|||+.+++|+||+|+||++++
T Consensus 76 ~lv~e~~~~~~L~~~l~~--------------------~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~ 135 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQ--------------------KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDE 135 (258)
T ss_pred EEEEeCCCCCCHHHHHHh--------------------cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC
Confidence 999999999999999862 135788999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC---HHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT---HEEVV 600 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~---~~e~~ 600 (653)
++.++|+|||++....... ......++..|+|||.+....++.++||||||+++|+|++|. .||...+ ..++.
T Consensus 136 ~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~-~p~~~~~~~~~~~~~ 211 (258)
T cd05578 136 QGHVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGK-RPYRGHSRTIRDQIR 211 (258)
T ss_pred CCCEEEeecccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCC-CCCCCCCccHHHHHH
Confidence 9999999999987653322 123345677899999999889999999999999999999965 5777666 44554
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCH--HHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF--RTIYQTL 644 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~eil~~L 644 (653)
..... .....+...+..+.+++.+||+.+|.+||++ ++++++.
T Consensus 212 ~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~ 256 (258)
T cd05578 212 AKQET-ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHP 256 (258)
T ss_pred HHhcc-ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCC
Confidence 44443 3445667789999999999999999999999 8887654
No 281
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.3e-35 Score=311.48 Aligned_cols=253 Identities=24% Similarity=0.417 Sum_probs=206.9
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
+...|...+.||+|+||.||+|+.. .++..||+|.++.. ......+++.+|+++++.++||||+++++++..+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~ 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDV-----RTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE 87 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEc-----CCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC
Confidence 3456888899999999999999864 34678999988643 2233445788999999999999999999999999
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
+..++|+||+. |+|.+++.. ....+++..+..++.|++.||.|||+.+++|+||+|+||+
T Consensus 88 ~~~~lv~e~~~-g~l~~~~~~-------------------~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl 147 (307)
T cd06607 88 HTAWLVMEYCL-GSASDILEV-------------------HKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNIL 147 (307)
T ss_pred CeEEEEHHhhC-CCHHHHHHH-------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEE
Confidence 99999999997 578777752 1235789999999999999999999999999999999999
Q ss_pred EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL---YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
+++++.++|+|||++..... .....++..|+|||.+. .+.++.++||||||+++|||++| .+||.+.+..
T Consensus 148 ~~~~~~~kL~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg-~~p~~~~~~~ 220 (307)
T cd06607 148 LTEPGTVKLADFGSASLVSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER-KPPLFNMNAM 220 (307)
T ss_pred ECCCCCEEEeecCcceecCC------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcC-CCCCCCccHH
Confidence 99999999999999875421 12345677899999874 45688999999999999999995 4588777766
Q ss_pred HHHHHHHcCCccCC-CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 598 EVVKYIKEGNILQA-PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 598 e~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
.....+........ +..++..+.+++.+||+.+|++||++.+|++++|..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 271 (307)
T cd06607 221 SALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVL 271 (307)
T ss_pred HHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 65555544333222 334778999999999999999999999999987643
No 282
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=6.7e-36 Score=315.01 Aligned_cols=256 Identities=23% Similarity=0.348 Sum_probs=189.7
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec--CCceEEEEe
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV--GKPMCLLFE 448 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~--~~~~~LV~E 448 (653)
+.||+|+||.||+|+... ..++..||+|.++.... ...+.+|+.++++++||||+++++++.. +...++|||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~---~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKD---GKDDRDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred cccccCCCeEEEEEEEcc---CCCCceEEEEEECCCCC---cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 569999999999998642 24567899999875432 2356789999999999999999998854 456899999
Q ss_pred ecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE----cCC
Q psy5539 449 YMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI----NDQ 524 (653)
Q Consensus 449 y~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl----~~~ 524 (653)
|+. ++|.+++....... .......+++..+..++.||+.||.|||+++|+||||||+|||+ +.+
T Consensus 81 ~~~-~~l~~~~~~~~~~~-----------~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~ 148 (317)
T cd07868 81 YAE-HDLWHIIKFHRASK-----------ANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER 148 (317)
T ss_pred ccC-CCHHHHHHhccccc-----------ccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCc
Confidence 986 58999886432111 01123458899999999999999999999999999999999999 466
Q ss_pred CcEEEeccCccccccccccc-cCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCH------
Q psy5539 525 MVVKIADFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTH------ 596 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~------ 596 (653)
+.+||+|||+++........ .......+|..|+|||.+.+. .++.++||||+|+++|||++|. +||.....
T Consensus 149 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~-~~f~~~~~~~~~~~ 227 (317)
T cd07868 149 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQEDIKTSN 227 (317)
T ss_pred CcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCC-CCccCCcccccccc
Confidence 89999999999765322211 112334678899999999874 5899999999999999999955 57753221
Q ss_pred ---HHHHHHHHc----------------------------CCccC---------CCCCCcHHHHHHHHHhhccCCCCCCC
Q psy5539 597 ---EEVVKYIKE----------------------------GNILQ---------APDNTPDALYDLMKLCWNMKPMNRPS 636 (653)
Q Consensus 597 ---~e~~~~i~~----------------------------~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs 636 (653)
.+....+.. ..... .....+.++.+|+++|++.||.+|||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t 307 (317)
T cd07868 228 PYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRIT 307 (317)
T ss_pred cccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCC
Confidence 011111100 00000 00112456889999999999999999
Q ss_pred HHHHHHHHH
Q psy5539 637 FRTIYQTLW 645 (653)
Q Consensus 637 ~~eil~~L~ 645 (653)
++|+++|.|
T Consensus 308 ~~e~l~hp~ 316 (317)
T cd07868 308 SEQAMQDPY 316 (317)
T ss_pred HHHHhcCCC
Confidence 999998865
No 283
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.8e-36 Score=331.32 Aligned_cols=254 Identities=18% Similarity=0.271 Sum_probs=197.2
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCC------CccceE
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH------PNIVKL 433 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~H------pnIv~l 433 (653)
+....++|++.+.||+|+||+||+|.+. ..+..||||+++... ....++..|+.++..++| .+++++
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~-----~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i 196 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDR-----KRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKI 196 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEc-----CCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeee
Confidence 4556788999999999999999999864 346789999996432 233456677777777755 458888
Q ss_pred EeEEecC-CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCcee
Q psy5539 434 LGVCAVG-KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVH 511 (653)
Q Consensus 434 ~g~~~~~-~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivH 511 (653)
++++... ...++|||++ +++|.+++.. ...+++..+..|+.||+.||+|||+ .+|||
T Consensus 197 ~~~~~~~~~~~~iv~~~~-g~~l~~~l~~--------------------~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiH 255 (467)
T PTZ00284 197 QRYFQNETGHMCIVMPKY-GPCLLDWIMK--------------------HGPFSHRHLAQIIFQTGVALDYFHTELHLMH 255 (467)
T ss_pred EEEEEcCCceEEEEEecc-CCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCeec
Confidence 8888654 5789999987 6789988862 2458899999999999999999998 59999
Q ss_pred cCCCCCCEeEcCCC----------------cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHH
Q psy5539 512 RDLATRNCLINDQM----------------VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWA 575 (653)
Q Consensus 512 rDLkp~NILl~~~~----------------~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwS 575 (653)
|||||+|||++.++ .+||+|||++.... .......+|..|||||.+.+..++.++||||
T Consensus 256 rDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwS 330 (467)
T PTZ00284 256 TDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWS 330 (467)
T ss_pred CCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHH
Confidence 99999999998765 49999999875321 1223456789999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC--Cc-----------------------cCC--C-------------C-C
Q psy5539 576 FGVCLWEIFSFALQPYYGLTHEEVVKYIKEG--NI-----------------------LQA--P-------------D-N 614 (653)
Q Consensus 576 lGvvl~ellt~~~~p~~~~~~~e~~~~i~~~--~~-----------------------~~~--~-------------~-~ 614 (653)
|||++|||++| .+||.+.+..+.+..+... .+ ... + + .
T Consensus 331 lGvil~elltG-~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (467)
T PTZ00284 331 MGCIIYELYTG-KLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVI 409 (467)
T ss_pred HHHHHHHHHhC-CCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhh
Confidence 99999999995 5688877665544333221 00 000 0 0 0
Q ss_pred CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 615 TPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 615 ~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
..+.+.+||.+||..||.+|||++|+++|+|-.
T Consensus 410 ~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~ 442 (467)
T PTZ00284 410 RDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVL 442 (467)
T ss_pred chHHHHHHHHHhCCcChhhCCCHHHHhcCcccc
Confidence 134577999999999999999999999998854
No 284
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=9.9e-36 Score=305.68 Aligned_cols=258 Identities=23% Similarity=0.391 Sum_probs=207.3
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEecC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVG 440 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~ 440 (653)
-+.++|++.+.||+|+||.||+|... .++..+++|.++.... ..+.+.+|+.+++++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 75 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHK-----KTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKK 75 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEEC-----CCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEec
Confidence 35678999999999999999999864 3457899999875433 346789999999999 799999999998654
Q ss_pred C------ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539 441 K------PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514 (653)
Q Consensus 441 ~------~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL 514 (653)
. ..++||||+++++|.++++... .....+++..+..++.|++.||.|||+.+++|+||
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----------------~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l 139 (275)
T cd06608 76 NPPGNDDQLWLVMELCGGGSVTDLVKGLR----------------KKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDI 139 (275)
T ss_pred CCCCcceEEEEEEEcCCCCcHHHHHHHHh----------------hcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 4 4899999999999999986321 11346889999999999999999999999999999
Q ss_pred CCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-----CCCCCchhHHHHHHHHHHHHhCCCC
Q psy5539 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-----NKYTVESDVWAFGVCLWEIFSFALQ 589 (653)
Q Consensus 515 kp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~t~ksDVwSlGvvl~ellt~~~~ 589 (653)
+|+||++++++.+||+|||++....... .......++..|+|||.+.. ..++.++||||||+++|+|++| ..
T Consensus 140 ~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g-~~ 216 (275)
T cd06608 140 KGQNILLTKNAEVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADG-KP 216 (275)
T ss_pred CHHHEEEccCCeEEECCCccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhC-CC
Confidence 9999999999999999999987543211 12233457788999998754 3467899999999999999995 55
Q ss_pred CCCCCCHHHHHHHHHcCCccC--CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 590 PYYGLTHEEVVKYIKEGNILQ--APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 590 p~~~~~~~e~~~~i~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
||......+....+..+.... .+...+.++.+++.+||..||++|||+.+++++.|
T Consensus 217 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~ 274 (275)
T cd06608 217 PLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274 (275)
T ss_pred CccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence 887666555554444433222 23346789999999999999999999999998765
No 285
>KOG0577|consensus
Probab=100.00 E-value=2.8e-37 Score=324.59 Aligned_cols=249 Identities=24% Similarity=0.426 Sum_probs=211.9
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc---ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE---ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~---~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
-|.-++.||.|+||.||-|++. .+...||||+..-. ..+.+ +++..|+..|.+++|||++.+-|.|.....
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~-----~n~evVAIKKMsySGKQs~EKW-qDIlKEVrFL~~l~HPntieYkgCyLre~T 100 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKW-QDILKEVRFLRQLRHPNTIEYKGCYLREHT 100 (948)
T ss_pred HHHHHHHhcCCccceeEEeecc-----CccceeeeeeccccccccHHHH-HHHHHHHHHHHhccCCCcccccceeeccch
Confidence 3566788999999999999863 45689999998643 23333 478999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.|||||||- |+-.|.|..+ ..++.+.++..|..+.+.||+|||+.+.||||||+.|||++
T Consensus 101 aWLVMEYCl-GSAsDlleVh-------------------kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs 160 (948)
T KOG0577|consen 101 AWLVMEYCL-GSASDLLEVH-------------------KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS 160 (948)
T ss_pred HHHHHHHHh-ccHHHHHHHH-------------------hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec
Confidence 999999995 4788887633 35688899999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL---YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
+.|.|||+|||.|..+ .+.....||+.|||||+|. .+.|+-++||||||++..||.. ..+|+..++.-..
T Consensus 161 e~g~VKLaDFGSAsi~------~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAE-RkPPlFnMNAMSA 233 (948)
T KOG0577|consen 161 EPGLVKLADFGSASIM------APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSA 233 (948)
T ss_pred CCCeeeeccccchhhc------CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhh-cCCCccCchHHHH
Confidence 9999999999999765 3345578999999999986 4689999999999999999998 5678888887777
Q ss_pred HHHHHcCCccCCC-CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 600 VKYIKEGNILQAP-DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 600 ~~~i~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+..|-....+..+ ..+++.+++|+..||++-|.+|||.+++++|.+-+
T Consensus 234 LYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~ 282 (948)
T KOG0577|consen 234 LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVL 282 (948)
T ss_pred HHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence 7777665544433 45889999999999999999999999999886543
No 286
>KOG2345|consensus
Probab=100.00 E-value=4.9e-37 Score=294.21 Aligned_cols=266 Identities=20% Similarity=0.277 Sum_probs=208.4
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV 439 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~ 439 (653)
+.+..++|.+.+.||+|||+.||+++. ..++..+|+|++.-.. .+..+...+|++..++++||||++++++...
T Consensus 16 v~In~~Ryri~~~LgeGGfsfv~LV~~-----~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~ 89 (302)
T KOG2345|consen 16 VIINNKRYRIQRLLGEGGFSFVDLVKG-----LSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLR 89 (302)
T ss_pred EEEcCceEEEeeeecCCCceeeeeecc-----cCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHH
Confidence 356677899999999999999999983 3456889999998665 3456678999999999999999999988643
Q ss_pred -----CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCC--ceec
Q psy5539 440 -----GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRK--FVHR 512 (653)
Q Consensus 440 -----~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~--ivHr 512 (653)
....||+++|...|+|.+.++... .+...+++.+.+.|+.+|.+||++||+.. ++||
T Consensus 90 ~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k----------------~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~ 153 (302)
T KOG2345|consen 90 EEKDGKHEAYLLLPYYKRGSLLDEIERLK----------------IKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHR 153 (302)
T ss_pred hhccCceeEEEEeehhccccHHHHHHHHh----------------hcCCccCHHHHHHHHHHHHHHHHHHhccCCccccc
Confidence 345899999999999999997432 23457899999999999999999999987 9999
Q ss_pred CCCCCCEeEcCCCcEEEeccCccccccccccccC-------CCCCCCccccccchhhcc---CCCCCchhHHHHHHHHHH
Q psy5539 513 DLATRNCLINDQMVVKIADFGLSRKMYLQDYYKG-------DENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWE 582 (653)
Q Consensus 513 DLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~---~~~t~ksDVwSlGvvl~e 582 (653)
||||.|||+.+.+.++|.|||.+......-.... .....-|+.|.|||.+.- ...++++|||||||+||+
T Consensus 154 DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa 233 (302)
T KOG2345|consen 154 DIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYA 233 (302)
T ss_pred CCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHH
Confidence 9999999999999999999999875421110000 011234778999998863 467899999999999999
Q ss_pred HHhCCCCCCCCCCH--HHHHHHHHcCCcc-CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 583 IFSFALQPYYGLTH--EEVVKYIKEGNIL-QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 583 llt~~~~p~~~~~~--~e~~~~i~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
|+-|. .||...-. ..+.-.+..+++. +.....++.+.++++.|++.||.+||++.+++.++..+.
T Consensus 234 ~mf~~-sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 234 MMFGE-SPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred HHHcC-CcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 99744 47743211 1122223333331 222348899999999999999999999999999988764
No 287
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.1e-35 Score=298.31 Aligned_cols=251 Identities=24% Similarity=0.415 Sum_probs=209.9
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
+|...+.||+|++|.||++... .++..+++|+++.... ...+.+.+|+++++.++|+||+++++++......++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 74 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHK-----RTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74 (253)
T ss_pred CceeeeeeccCCceEEEEEEEC-----CCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 4677889999999999999864 2567899999976544 345678999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
++||+++++|.+++... ...+++..+..++.|++.||.+||+.+++|+||+|+||++++++
T Consensus 75 ~~e~~~~~~L~~~~~~~-------------------~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~ 135 (253)
T cd05122 75 VMEFCSGGSLKDLLKST-------------------NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG 135 (253)
T ss_pred EEecCCCCcHHHHHhhc-------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCC
Confidence 99999999999998621 14689999999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~ 605 (653)
.++|+|||.+........ .....++..|+|||.+....++.++||||||+++++|++|. .|+...+..+....+..
T Consensus 136 ~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~-~p~~~~~~~~~~~~~~~ 211 (253)
T cd05122 136 EVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK-PPYSELPPMKALFKIAT 211 (253)
T ss_pred eEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCC-CCCCCCchHHHHHHHHh
Confidence 999999999876533221 23445678899999999888999999999999999999955 58877655555444444
Q ss_pred CCccCCCCC--CcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 606 GNILQAPDN--TPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 606 ~~~~~~~~~--~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
......+.. ++..+.+++.+||+.+|++|||+.+++++.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 212 NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred cCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 333333333 3889999999999999999999999998754
No 288
>KOG1989|consensus
Probab=100.00 E-value=3.9e-36 Score=333.67 Aligned_cols=263 Identities=22% Similarity=0.331 Sum_probs=212.3
Q ss_pred cccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeE
Q psy5539 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGV 436 (653)
Q Consensus 358 ~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~ 436 (653)
..+++...++.+.+.|.+|||+.||+|++.+ .+..+|+|++-.. .+...+.+.+||++|+.|+ |+|||.+++.
T Consensus 30 ~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~-----~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yids 103 (738)
T KOG1989|consen 30 QTFTVGSHRVTVEKVLAEGGFAQVYLAQDVK-----GGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDS 103 (738)
T ss_pred eEEEECCEEEEEEEEEccCCcEEEEEEEecC-----CCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEecc
Confidence 4457778889999999999999999999743 2378999998765 5667778999999999997 9999999993
Q ss_pred -Eec------CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCC-
Q psy5539 437 -CAV------GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRK- 508 (653)
Q Consensus 437 -~~~------~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~- 508 (653)
... .-+.+|+||||.+|.|-++|+..- ...|++.++++|+.|+++|+++||..+
T Consensus 104 s~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rl------------------q~~lte~eVLkIf~dv~~AVa~mH~~~p 165 (738)
T KOG1989|consen 104 SAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRL------------------QTRLTEDEVLKIFYDVCEAVAAMHYLKP 165 (738)
T ss_pred ccccccCCCceeEEEeehhhccCCcHHHHHHHHH------------------hccCChHHHHHHHHHHHHHHHHHhcCCC
Confidence 321 236799999999999999998432 234899999999999999999999775
Q ss_pred -ceecCCCCCCEeEcCCCcEEEeccCcccccccccc-------ccCCCCCCCccccccchhhc---cCCCCCchhHHHHH
Q psy5539 509 -FVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDY-------YKGDENDAIPVRWMPLESIL---YNKYTVESDVWAFG 577 (653)
Q Consensus 509 -ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~-------~~~~~~~~~t~~y~aPE~~~---~~~~t~ksDVwSlG 577 (653)
|||||||-+||||+.++..||||||.+......-. ....-....|+.|.|||.+. +..+++|+||||||
T Consensus 166 PiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALG 245 (738)
T KOG1989|consen 166 PIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALG 245 (738)
T ss_pred ccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHH
Confidence 99999999999999999999999999864321110 01111234688999999875 55789999999999
Q ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccCCC-CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 578 VCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAP-DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 578 vvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
|+||-|+.+. .||.+... ..|..+.+...+ +..+..+.+||+.||+.+|.+||++.+++..+.+|..
T Consensus 246 clLYkLCy~t-~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 246 CLLYKLCYFT-TPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred HHHHHHHHhC-CCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 9999998754 58876532 234555543322 5789999999999999999999999999999988864
No 289
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.3e-35 Score=299.56 Aligned_cols=256 Identities=23% Similarity=0.420 Sum_probs=219.2
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|.+.+.||+|+||.||++... .++..+++|++..... ......+.+|+++++.++|+|++++++.+..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRK-----SDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEc-----CCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEE
Confidence 4678899999999999999864 3567899999875432 345567899999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+|+||+++++|.++++... .....+++..+..++.+++.||.|||+.+++|+||+|+||+++++
T Consensus 76 lv~e~~~~~~L~~~l~~~~----------------~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~ 139 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQK----------------KEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSN 139 (258)
T ss_pred EEEEecCCCcHHHHHHHhh----------------ccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCC
Confidence 9999999999999997321 123568999999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
+.++|+|||++....... .......++..|+|||......++.++||||||+++++|++| ..||...+..++...+.
T Consensus 140 ~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~ 216 (258)
T cd08215 140 GLVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTL-KHPFEGENLLELALKIL 216 (258)
T ss_pred CcEEECCccceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcC-CCCCCCCcHHHHHHHHh
Confidence 999999999987653322 112234567789999999999999999999999999999985 56888888888888887
Q ss_pred cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.......+...+.++.+++++||..+|++||++.+++++.|
T Consensus 217 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 257 (258)
T cd08215 217 KGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPF 257 (258)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCC
Confidence 77777777788999999999999999999999999998754
No 290
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9.6e-36 Score=309.62 Aligned_cols=253 Identities=25% Similarity=0.400 Sum_probs=197.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|++.+.||+|+||.||+|+.. .+++.||||.++..........+.+|++++++++|+||+++++++..++..+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSK-----LTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEc-----CCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEE
Confidence 57889999999999999999863 3567899999875433323345678999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++ +|.+++... ...+++..+..++.|+++||.|||+++|+||||||+|||++++
T Consensus 80 lv~e~~~~-~L~~~~~~~-------------------~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~ 139 (291)
T cd07844 80 LVFEYLDT-DLKQYMDDC-------------------GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISER 139 (291)
T ss_pred EEEecCCC-CHHHHHHhC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCC
Confidence 99999985 999988621 2357889999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLT-HEEVVKY 602 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~-~~e~~~~ 602 (653)
+.+||+|||+++....... ......++..|+|||.+.+ ..++.++||||||+++|||++| .+||.+.. ..+.+..
T Consensus 140 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g-~~~~~~~~~~~~~~~~ 216 (291)
T cd07844 140 GELKLADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATG-RPLFPGSTDVEDQLHK 216 (291)
T ss_pred CCEEECccccccccCCCCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhC-CCCCCCCccHHHHHHH
Confidence 9999999999875422111 1122345778999998875 4589999999999999999995 45776554 2222222
Q ss_pred HHcCC-----------------------c------cCCCCCCc--HHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKEGN-----------------------I------LQAPDNTP--DALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~~~-----------------------~------~~~~~~~~--~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.+.. . ........ .++.+++.+|++.+|++|||+.+++++.|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~ 290 (291)
T cd07844 217 IFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY 290 (291)
T ss_pred HHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCC
Confidence 11100 0 00001233 77889999999999999999999988754
No 291
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.1e-35 Score=306.74 Aligned_cols=251 Identities=20% Similarity=0.350 Sum_probs=208.2
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
.+...+.||+|++|.||++... .++..+++|.++... ....+.+.+|+.+++.++|+||+++++++..++..++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~ 93 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDK-----STGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWV 93 (285)
T ss_pred hhhcceEeccCCCeEEEEEEEC-----CCCCEEEEEEEeccc-hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEE
Confidence 3455678999999999999853 345789999886433 2334568899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
|+||+++++|.+++.. ..+++..+..++.|++.||+|||+++++||||+|+||++++++
T Consensus 94 v~e~~~~~~L~~~~~~---------------------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~ 152 (285)
T cd06648 94 VMEFLEGGALTDIVTH---------------------TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG 152 (285)
T ss_pred EEeccCCCCHHHHHHh---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC
Confidence 9999999999999861 3478889999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~ 605 (653)
.++|+|||++....... .......++..|+|||.+.+..++.++||||||+++|||++|. .||...+..+....+..
T Consensus 153 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~-~p~~~~~~~~~~~~~~~ 229 (285)
T cd06648 153 RVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGE-PPYFNEPPLQAMKRIRD 229 (285)
T ss_pred cEEEcccccchhhccCC--cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCC-CCCcCCCHHHHHHHHHh
Confidence 99999999886542211 1122345778899999999889999999999999999999955 58877777777776666
Q ss_pred CCccCC--CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 606 GNILQA--PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 606 ~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
...... +..++..+.+++.+||+.+|++||++.+++++.+-
T Consensus 230 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (285)
T cd06648 230 NLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFL 272 (285)
T ss_pred cCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCccc
Confidence 533222 23378899999999999999999999999987653
No 292
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6.4e-36 Score=312.67 Aligned_cols=253 Identities=21% Similarity=0.384 Sum_probs=208.5
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLL 446 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV 446 (653)
|.....||+|+||.||+|... .++..||+|.+..... ...+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv 96 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREK-----HSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVL 96 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEc-----CCCCEEEEEEEEeccc-chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEE
Confidence 334456999999999999863 3567899999865432 2345688999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCc
Q psy5539 447 FEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV 526 (653)
Q Consensus 447 ~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~ 526 (653)
+||+++++|.+++. ...+++..++.++.|++.||.|||+.+++|+||||+||++++++.
T Consensus 97 ~e~~~~~~L~~~~~---------------------~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~ 155 (297)
T cd06659 97 MEFLQGGALTDIVS---------------------QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGR 155 (297)
T ss_pred EecCCCCCHHHHHh---------------------hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCc
Confidence 99999999998774 134788999999999999999999999999999999999999999
Q ss_pred EEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy5539 527 VKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606 (653)
Q Consensus 527 vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~ 606 (653)
+||+|||++....... .......++..|+|||.+.+..++.++||||||+++|||++|. .||...+..+....+...
T Consensus 156 ~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~-~p~~~~~~~~~~~~~~~~ 232 (297)
T cd06659 156 VKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGE-PPYFSDSPVQAMKRLRDS 232 (297)
T ss_pred EEEeechhHhhccccc--ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHhcc
Confidence 9999999987543221 1123345778999999999889999999999999999999955 588777766666665543
Q ss_pred Cc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 607 NI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 607 ~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
.. ...+...+..+.+++++||+.+|.+||++++++++.+..+.
T Consensus 233 ~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 233 PPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred CCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 22 12234577899999999999999999999999998776543
No 293
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.7e-35 Score=308.82 Aligned_cols=253 Identities=26% Similarity=0.362 Sum_probs=202.4
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc----HHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS----EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~----~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
+|++.+.||+|+||.||+|... .+++.||||.++.... ......+..|++++++++|+||+++++++...+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDK-----ETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEEC-----CCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC
Confidence 3677889999999999999864 3467899999975432 223456778999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+ +|+|.++++.. ...+++..++.++.||++||.|||+++++|+||+|+|||+
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~-------------------~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill 135 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDK-------------------SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI 135 (298)
T ss_pred EEEEEEccc-CCCHHHHHhcc-------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE
Confidence 999999999 89999998621 1258899999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+.++.++|+|||+++...... .......++..|+|||.+.+ ..++.++||||||+++|||++| .+||.+.+..+..
T Consensus 136 ~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g-~~~~~~~~~~~~~ 212 (298)
T cd07841 136 ASDGVLKLADFGLARSFGSPN--RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLR-VPFLPGDSDIDQL 212 (298)
T ss_pred cCCCCEEEccceeeeeccCCC--ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcC-CccccCCccHHHH
Confidence 999999999999997653221 11223345678999998865 4678999999999999999996 6677766654444
Q ss_pred HHHHcCCc----------------------c-----CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNI----------------------L-----QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~----------------------~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
..+..... . ......+..+.+++.+||+.+|++|||+.+++++.|-
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~ 285 (298)
T cd07841 213 GKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYF 285 (298)
T ss_pred HHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccc
Confidence 33321100 0 0113356789999999999999999999999998663
No 294
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.5e-35 Score=301.22 Aligned_cols=253 Identities=24% Similarity=0.416 Sum_probs=218.0
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|++.+.||+|+||.||+++.. .++..+++|.++... ......++.+|+++++.++|+||+++++++..+...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRL-----SDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEEC-----CCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEE
Confidence 4678899999999999999853 356789999987532 3344567889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+|+||+++++|.+++.... .....+++..++.++.|++.||+|||+.+++|+||+|+||+++++
T Consensus 76 ~v~e~~~~~~L~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~ 139 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRK----------------KKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAN 139 (256)
T ss_pred EEehhcCCCCHHHHHHHHH----------------hhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecC
Confidence 9999999999999987321 123467899999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
+.+||+|||++...... ......++..|+|||.+.+..++.++|+||||+++|||++ +..||...+..++...+.
T Consensus 140 ~~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~ 214 (256)
T cd08530 140 DLVKIGDLGISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMAT-FAPPFEARSMQDLRYKVQ 214 (256)
T ss_pred CcEEEeeccchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHh
Confidence 99999999999765332 2223456788999999999999999999999999999998 456999888888888888
Q ss_pred cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 605 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
.+.....+...+.++.+++.+||+.+|++||++.++++++
T Consensus 215 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p 254 (256)
T cd08530 215 RGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254 (256)
T ss_pred cCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence 8777777778899999999999999999999999999875
No 295
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.9e-35 Score=307.54 Aligned_cols=254 Identities=25% Similarity=0.411 Sum_probs=197.6
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.++|.+.+.||+|+||.||+|... .++..||+|+++..........+.+|+.+++.++|+||+++++++..++..
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 78 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISR-----INGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETL 78 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEc-----CCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeE
Confidence 467899999999999999999864 345789999987654443344678899999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++|+||+. ++|.+++.. ....+++..+..++.||+.||.|||+.+|+|+||||+|||++.
T Consensus 79 ~lv~e~~~-~~l~~~~~~-------------------~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~ 138 (291)
T cd07870 79 TFVFEYMH-TDLAQYMIQ-------------------HPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY 138 (291)
T ss_pred EEEEeccc-CCHHHHHHh-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC
Confidence 99999995 688877641 1234678888999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTH-EEVVK 601 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~-~e~~~ 601 (653)
++.+||+|||+++...... .......++..|+|||.+.+. .++.++||||||+++|||++|. .||.+.+. .+.+.
T Consensus 139 ~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~-~~f~~~~~~~~~~~ 215 (291)
T cd07870 139 LGELKLADFGLARAKSIPS--QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQ-PAFPGVSDVFEQLE 215 (291)
T ss_pred CCcEEEeccccccccCCCC--CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCC-CCCCCchhHHHHHH
Confidence 9999999999987543221 112233457889999998764 5789999999999999999965 57765442 22222
Q ss_pred HHHc--C-----------Cc--------cCC-C---------CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 602 YIKE--G-----------NI--------LQA-P---------DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 602 ~i~~--~-----------~~--------~~~-~---------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.. + .. ... + ...+.++.+++.+|+..||++|||+.+++.+.|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~ 290 (291)
T cd07870 216 KIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290 (291)
T ss_pred HHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCC
Confidence 1110 0 00 000 0 012568899999999999999999999998754
No 296
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2e-35 Score=305.22 Aligned_cols=249 Identities=23% Similarity=0.344 Sum_probs=197.9
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeEEecC--Cce
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGVCAVG--KPM 443 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~--~~~ 443 (653)
|++.+.||+|+||.||+|+.. .++..||+|.++............+|+.++.++. |+||+++++++..+ +..
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~-----~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 75 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSR-----KTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRL 75 (282)
T ss_pred CceEeeccccccceEEEEEEc-----CCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcE
Confidence 467889999999999999863 3567899999876433323334567899999985 99999999999877 889
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++|+||++ |+|.+++.. ....+++.+++.++.|++.||+|||+.+++||||+|+||++++
T Consensus 76 ~lv~e~~~-~~l~~~l~~-------------------~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~ 135 (282)
T cd07831 76 ALVFELMD-MNLYELIKG-------------------RKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD 135 (282)
T ss_pred EEEEecCC-ccHHHHHHh-------------------ccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC
Confidence 99999997 588888762 1245899999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
+.+||+|||+++....... .....++..|+|||.+.. ..++.++||||||+++|||++ +.+||.+.+..+.+..
T Consensus 136 -~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~-~~~p~~~~~~~~~~~~ 210 (282)
T cd07831 136 -DILKLADFGSCRGIYSKPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILS-LFPLFPGTNELDQIAK 210 (282)
T ss_pred -CCeEEEecccccccccCCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHc-CCcCCCCCCHHHHHHH
Confidence 9999999999976532221 122346778999997754 457899999999999999998 5669987776555444
Q ss_pred HHcCC---------------c--cCC-----------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKEGN---------------I--LQA-----------PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~~~---------------~--~~~-----------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.+.. . ... ....+.++.+++.+||+.+|++||++++++++.|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~ 281 (282)
T cd07831 211 IHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281 (282)
T ss_pred HHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCC
Confidence 43210 0 000 1246789999999999999999999999998764
No 297
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.1e-35 Score=310.29 Aligned_cols=252 Identities=23% Similarity=0.416 Sum_probs=206.5
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
+.|...+.||+|+||.||+|+.. .++..||+|.+... ........+.+|++++++++|+|++++++++..+..
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~-----~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 99 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDV-----RTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHT 99 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEc-----CCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCe
Confidence 34677888999999999999863 34678999998643 223345578899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||++ |+|.+++.. ....+++.++..++.|++.||.|||+.+|+|+||+|+||+++
T Consensus 100 ~~lv~e~~~-g~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~ 159 (317)
T cd06635 100 AWLVMEYCL-GSASDLLEV-------------------HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT 159 (317)
T ss_pred EEEEEeCCC-CCHHHHHHH-------------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC
Confidence 999999997 588887752 124588999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL---YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
+++.+||+|||++.... ......++..|+|||.+. .+.++.++||||||+++|||++|. .||...+..+.
T Consensus 160 ~~~~~kl~dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~-~p~~~~~~~~~ 232 (317)
T cd06635 160 EPGQVKLADFGSASIAS------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK-PPLFNMNAMSA 232 (317)
T ss_pred CCCCEEEecCCCccccC------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCC-CCCCCccHHHH
Confidence 99999999999986432 122345677899999974 457899999999999999999965 47777666655
Q ss_pred HHHHHcCCc-cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 600 VKYIKEGNI-LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 600 ~~~i~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
...+..+.. .......+..+.+++.+||+.+|.+||++.+|+++++.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 233 LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred HHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 555554433 2334467889999999999999999999999999887544
No 298
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.5e-35 Score=305.82 Aligned_cols=256 Identities=23% Similarity=0.397 Sum_probs=212.4
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
..+.|...+.||+|+||.||+|... .++..|++|.++.... ....+.+|+++++.++|+||+++++.+.....
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 89 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDR-----ATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDE 89 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEc-----cCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCE
Confidence 3456778889999999999999864 2457899999975433 45678899999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++|+||+++++|.+++.... ..+++..++.++.|++.||.|||+.+++|+||+|+||+++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-------------------~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~ 150 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF-------------------VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS 150 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc-------------------cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc
Confidence 999999999999999997321 3588999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
.++.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++|+|++| ..||...+.......
T Consensus 151 ~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g-~~p~~~~~~~~~~~~ 227 (286)
T cd06614 151 KDGSVKLADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEG-EPPYLREPPLRALFL 227 (286)
T ss_pred CCCCEEECccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhC-CCCCCCCCHHHHHHH
Confidence 999999999999865432211 11223456789999999988899999999999999999995 458887776665555
Q ss_pred HHcCCccCC--CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 603 IKEGNILQA--PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 603 i~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
+........ +..++..+.+++.+||+.+|.+||++.+|+++.+-.
T Consensus 228 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 274 (286)
T cd06614 228 ITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLK 274 (286)
T ss_pred HHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhh
Confidence 554433332 233789999999999999999999999999887654
No 299
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.1e-35 Score=307.94 Aligned_cols=253 Identities=24% Similarity=0.406 Sum_probs=200.2
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|+.++.||+|+||.||+|+.. .++..||||.++.... ......+.+|++++++++||||+++++++..++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNK-----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEEC-----CCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEE
Confidence 4778899999999999999864 3567899999875432 223356889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+. ++|.+++... ....+++..++.++.|++.||+|||+.+++|+||+|+||+++++
T Consensus 76 ~v~e~~~-~~l~~~~~~~------------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~ 136 (284)
T cd07860 76 LVFEFLH-QDLKKFMDAS------------------PLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE 136 (284)
T ss_pred EEeeccc-cCHHHHHHhC------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 9999996 6899988621 23458899999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY- 602 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~- 602 (653)
+.+||+|||++....... .......++..|+|||.+.+.. ++.++||||||+++|||++|. .||.+.+..+....
T Consensus 137 ~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~-~p~~~~~~~~~~~~~ 213 (284)
T cd07860 137 GAIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR-ALFPGDSEIDQLFRI 213 (284)
T ss_pred CCEEEeeccchhhcccCc--cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCC-CCCCCCCHHHHHHHH
Confidence 999999999987543221 1122334577899999887654 588999999999999999965 47766554332222
Q ss_pred HHcCCc---------------------------cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKEGNI---------------------------LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~~~~---------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+..... ......++.++++++.+||+.||.+|||+++++++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 283 (284)
T cd07860 214 FRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283 (284)
T ss_pred HHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCC
Confidence 211000 0112346788999999999999999999999998765
No 300
>KOG0667|consensus
Probab=100.00 E-value=6.8e-36 Score=322.22 Aligned_cols=250 Identities=24% Similarity=0.363 Sum_probs=203.9
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-C-----CccceEEeEEec
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-H-----PNIVKLLGVCAV 439 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-H-----pnIv~l~g~~~~ 439 (653)
+|.+.+.||+|+||.|-+|.+. .++..||||+++... ....+...|+.+|..|+ | -|+|++++++..
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~-----~T~e~VAIKIiKN~k--~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f 259 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDH-----KTGEIVAIKIIKNKK--RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF 259 (586)
T ss_pred EEEEEEEecccccceeEEEEec-----CCCcEEEEEeeccCh--HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc
Confidence 7889999999999999999864 567899999998653 34455678999999997 4 499999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
.+++|||+|.+.. ||.++|+.+ +...++...+..|+.||+.||.+||+.+|||+||||+||
T Consensus 260 r~HlciVfELL~~-NLYellK~n------------------~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENI 320 (586)
T KOG0667|consen 260 RNHLCIVFELLST-NLYELLKNN------------------KFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENI 320 (586)
T ss_pred ccceeeeehhhhh-hHHHHHHhc------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhhe
Confidence 9999999999865 999999843 345689999999999999999999999999999999999
Q ss_pred eEcCC--CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 520 LINDQ--MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 520 Ll~~~--~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
||.+- ..+||+|||.|......-+ ...-+..|.|||++.+.+|+.+.||||||||++||++| .+.|.|.+..
T Consensus 321 LL~~~~r~~vKVIDFGSSc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG-~PLfpG~ne~ 394 (586)
T KOG0667|consen 321 LLKDPKRSRIKVIDFGSSCFESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTG-EPLFPGDNEY 394 (586)
T ss_pred eeccCCcCceeEEecccccccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcC-ccccCCCCHH
Confidence 99744 4899999999976422111 22335569999999999999999999999999999995 7788888776
Q ss_pred HHHHHHHc---------------------C--Ccc----------------------------CCC-C----------CC
Q psy5539 598 EVVKYIKE---------------------G--NIL----------------------------QAP-D----------NT 615 (653)
Q Consensus 598 e~~~~i~~---------------------~--~~~----------------------------~~~-~----------~~ 615 (653)
+.+..|.+ . ..+ ..| . ..
T Consensus 395 DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~ 474 (586)
T KOG0667|consen 395 DQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKAD 474 (586)
T ss_pred HHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhccccc
Confidence 65555432 0 000 001 0 11
Q ss_pred cHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 616 PDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 616 ~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
...+.+++++|++.||.+|+|..+.++|.|--
T Consensus 475 ~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~ 506 (586)
T KOG0667|consen 475 DKLFIDFLKRCLEWDPAERITPAQALNHPFLT 506 (586)
T ss_pred HHHHHHHHHHHhccCchhcCCHHHHhcCcccc
Confidence 24678999999999999999999999998743
No 301
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.8e-35 Score=303.33 Aligned_cols=253 Identities=25% Similarity=0.430 Sum_probs=203.4
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-----HHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-----EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-----~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
|+..+.||+|+||.||+|+.. .++..||+|.++.... ....+.+.+|+.++++++|+||+++++++...+
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~-----~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 76 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDV-----KTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS 76 (268)
T ss_pred ccccceecCcCceEEEEEEEc-----CCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC
Confidence 566788999999999999853 4567899998864321 224567899999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++|+||+++++|.+++.. ...+++..++.++.||+.||.|||+++++|+||+|+||++
T Consensus 77 ~~~~v~e~~~~~~L~~~l~~--------------------~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~ 136 (268)
T cd06630 77 HFNLFVEWMAGGSVSHLLSK--------------------YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLI 136 (268)
T ss_pred eEEEEEeccCCCcHHHHHHH--------------------hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 99999999999999999862 2357888999999999999999999999999999999999
Q ss_pred cCCC-cEEEeccCccccccccccccC--CCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH-
Q psy5539 522 NDQM-VVKIADFGLSRKMYLQDYYKG--DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE- 597 (653)
Q Consensus 522 ~~~~-~vkI~DfGla~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~- 597 (653)
+.++ .+||+|||++........... .....++..|+|||.+.+..++.++||||||+++|+|++|. .||......
T Consensus 137 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~-~p~~~~~~~~ 215 (268)
T cd06630 137 DSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK-PPWNAEKHSN 215 (268)
T ss_pred cCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCC-CCCCCCCCcc
Confidence 8775 699999999876643211111 12235678899999998889999999999999999999955 577544322
Q ss_pred --HHHHHHH-cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 598 --EVVKYIK-EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 598 --e~~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.....+. .......++..+.++.+++.+||..+|.+||++.+++++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~ 266 (268)
T cd06630 216 HLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPV 266 (268)
T ss_pred hHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcc
Confidence 2222221 22234455667889999999999999999999999998764
No 302
>KOG4279|consensus
Probab=100.00 E-value=1.4e-36 Score=323.79 Aligned_cols=246 Identities=25% Similarity=0.410 Sum_probs=206.2
Q ss_pred eecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeecC
Q psy5539 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMG 451 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~~ 451 (653)
.||+|.||+||-|++. .+...+|||-+.+..++. .+-+.+||.+-++|+|.|||+++|.+..++.+-+.||-++
T Consensus 582 VLGKGTYG~VYA~RD~-----~tqvrIaIKEIpekdsr~-~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVP 655 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDM-----DTQVRIAIKEIPEKDSRE-VQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVP 655 (1226)
T ss_pred EeecCceeEEEeeccc-----cceeEEEeeecccccchh-hccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCC
Confidence 4999999999999864 355789999998776654 3468899999999999999999999999999999999999
Q ss_pred CCChHHHHhhcCCCCCcCCCcccccccccCCCCC--CHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc-CCCcEE
Q psy5539 452 RGDLNDFLRICSPNNYINGTYSSMESSIHRVPQL--STCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN-DQMVVK 528 (653)
Q Consensus 452 ~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~-~~~~vk 528 (653)
||+|.+.|+.+ =+++ ++.++-.+.+||++||.|||+..|||||||-+||||+ -.|.+|
T Consensus 656 GGSLSsLLrsk-------------------WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlK 716 (1226)
T KOG4279|consen 656 GGSLSSLLRSK-------------------WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLK 716 (1226)
T ss_pred CCcHHHHHHhc-------------------cCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEE
Confidence 99999999832 1334 7778889999999999999999999999999999996 679999
Q ss_pred EeccCccccccccccccCCCCCCCccccccchhhccC--CCCCchhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHH-
Q psy5539 529 IADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFSFALQPYYGLT-HEEVVKYIK- 604 (653)
Q Consensus 529 I~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~t~ksDVwSlGvvl~ellt~~~~p~~~~~-~~e~~~~i~- 604 (653)
|+|||-++++.. ...-.+...||..|||||++..+ .|..++|||||||++.||.| |.+||.... ++..+-++-
T Consensus 717 ISDFGTsKRLAg--inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMAT-GrPPF~ElgspqAAMFkVGm 793 (1226)
T KOG4279|consen 717 ISDFGTSKRLAG--INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMAT-GRPPFVELGSPQAAMFKVGM 793 (1226)
T ss_pred ecccccchhhcc--CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeecc-CCCCeeecCChhHhhhhhcc
Confidence 999999987632 22345667899999999999876 58899999999999999999 556887553 333333322
Q ss_pred cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
-+..++.|+..+.+.+++|.+|+.++|.+||+++++++.++
T Consensus 794 yKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpF 834 (1226)
T KOG4279|consen 794 YKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPF 834 (1226)
T ss_pred eecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcc
Confidence 22335677888899999999999999999999999998765
No 303
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.6e-35 Score=310.27 Aligned_cols=256 Identities=23% Similarity=0.351 Sum_probs=189.7
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec--CCceEEEEe
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV--GKPMCLLFE 448 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~--~~~~~LV~E 448 (653)
..||+|+||.||+|+... ..++..||+|.++.... ...+.+|++++++++||||+++++++.. +...++|||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~---~~~~~~~a~k~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKD---GKDEKEYALKQIEGTGI---SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred eEeccCCCeeEEEEEecC---CCccceEEEEEecCCCC---cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 569999999999998642 23557899999875432 2357889999999999999999998853 567899999
Q ss_pred ecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE----cCC
Q psy5539 449 YMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI----NDQ 524 (653)
Q Consensus 449 y~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl----~~~ 524 (653)
|+++ +|.+++....... .......+++..+..++.||+.||.|||+.+|+||||||+|||+ +++
T Consensus 81 ~~~~-~l~~~~~~~~~~~-----------~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~ 148 (317)
T cd07867 81 YAEH-DLWHIIKFHRASK-----------ANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPER 148 (317)
T ss_pred eeCC-cHHHHHHhhhccc-----------cCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCC
Confidence 9864 8888886332110 01123458899999999999999999999999999999999999 567
Q ss_pred CcEEEeccCccccccccccc-cCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH-----
Q psy5539 525 MVVKIADFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHE----- 597 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~----- 597 (653)
+.+||+|||+++........ .......+|..|+|||.+.+. .++.++||||||+++|||++|. +||.....+
T Consensus 149 ~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~-~~f~~~~~~~~~~~ 227 (317)
T cd07867 149 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQEDIKTSN 227 (317)
T ss_pred CcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCC-CCcccccccccccc
Confidence 89999999999865332211 112234568899999998764 5899999999999999999955 577532211
Q ss_pred -----HHHHHHH--------------c-------------CCc---------cCCCCCCcHHHHHHHHHhhccCCCCCCC
Q psy5539 598 -----EVVKYIK--------------E-------------GNI---------LQAPDNTPDALYDLMKLCWNMKPMNRPS 636 (653)
Q Consensus 598 -----e~~~~i~--------------~-------------~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPs 636 (653)
.+...+. . ... .......+..+.+|+.+|+..||.+|||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t 307 (317)
T cd07867 228 PFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRIT 307 (317)
T ss_pred cccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccC
Confidence 1100000 0 000 0001123456889999999999999999
Q ss_pred HHHHHHHHH
Q psy5539 637 FRTIYQTLW 645 (653)
Q Consensus 637 ~~eil~~L~ 645 (653)
++|+++|+|
T Consensus 308 ~~e~l~hp~ 316 (317)
T cd07867 308 SEQALQDPY 316 (317)
T ss_pred HHHHhcCCC
Confidence 999998865
No 304
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.5e-35 Score=305.52 Aligned_cols=254 Identities=23% Similarity=0.371 Sum_probs=203.2
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
++|++.+.||+|+||.||+|... .++..||+|.++... .....+.+.+|++++++++|+||+++++++..++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~-----~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNK-----ATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeC-----CCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEE
Confidence 36889999999999999999864 346789999987532 333456789999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||++++.|..+++ ....+++..+..++.||+.||.|||+.+++|+||+|+||++++
T Consensus 76 ~iv~e~~~~~~l~~~~~--------------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~ 135 (288)
T cd07833 76 YLVFEYVERTLLELLEA--------------------SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE 135 (288)
T ss_pred EEEEecCCCCHHHHHHh--------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC
Confidence 99999999877766553 2234789999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
++.+||+|||++........ .......++..|+|||.+.+. .++.++||||||+++|+|++|. +||.+....+....
T Consensus 136 ~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~-~~~~~~~~~~~~~~ 213 (288)
T cd07833 136 SGVLKLCDFGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGE-PLFPGDSDIDQLYL 213 (288)
T ss_pred CCCEEEEeeecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCC-CCCCCCCHHHHHHH
Confidence 99999999999876543321 112234457789999999888 8899999999999999999954 57776554433222
Q ss_pred HHc--------------------C-Ccc----------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKE--------------------G-NIL----------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~--------------------~-~~~----------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.. + ... ..+..++.++.+++++||+.+|++||++++++++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 287 (288)
T cd07833 214 IQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287 (288)
T ss_pred HHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCC
Confidence 211 0 000 012234788999999999999999999999988754
No 305
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=7.4e-35 Score=295.56 Aligned_cols=254 Identities=26% Similarity=0.430 Sum_probs=211.2
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecC--Cc
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--KP 442 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--~~ 442 (653)
+|...+.||+|++|.||+|... .+++.|++|.++.... ....+.+.+|+.++++++|+||+++++.+... ..
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDK-----DTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNT 75 (260)
T ss_pred CceeeeEeeecCceEEEEEEEC-----CCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCe
Confidence 3677889999999999999864 3567899999875432 34566789999999999999999999999888 88
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++++||+++++|.+++.. ...+++..++.++.|++.||+|||+.+++|+||+|+||+++
T Consensus 76 ~~lv~e~~~~~~L~~~~~~--------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~ 135 (260)
T cd06606 76 LNIFLEYVSGGSLSSLLKK--------------------FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD 135 (260)
T ss_pred EEEEEEecCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc
Confidence 9999999999999999862 12689999999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC-HHHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT-HEEVVK 601 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~-~~e~~~ 601 (653)
+++.++|+|||.+................++..|+|||.+.....+.++||||||+++++|++|. .||.... ......
T Consensus 136 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~-~p~~~~~~~~~~~~ 214 (260)
T cd06606 136 SDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK-PPWSELGNPMAALY 214 (260)
T ss_pred CCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCchHHHHH
Confidence 99999999999987664333211123456778899999999888999999999999999999954 5776654 333333
Q ss_pred HHHc-CCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 602 YIKE-GNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 602 ~i~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.. +.....+...+..+.+++.+|++.+|++||++.+++++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~ 259 (260)
T cd06606 215 KIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPF 259 (260)
T ss_pred hccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCC
Confidence 3332 3445566778999999999999999999999999998764
No 306
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2e-35 Score=301.42 Aligned_cols=246 Identities=28% Similarity=0.394 Sum_probs=206.1
Q ss_pred ecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 373 LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
||+|+||.||+++.. .++..+++|.++.... ....+.+.+|++++++++|+||+++++.+..+...++++||+
T Consensus 1 lg~g~~~~vy~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKK-----STGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEEC-----CCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecC
Confidence 689999999999864 3467899999875432 244567899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++++|.+++.. ...+++..+..++.||+.||.|||+.+++|+||+|+||++++++.++|+
T Consensus 76 ~~~~L~~~l~~--------------------~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~ 135 (265)
T cd05579 76 PGGDLASLLEN--------------------VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLT 135 (265)
T ss_pred CCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEE
Confidence 99999999862 1357899999999999999999999999999999999999999999999
Q ss_pred ccCcccccccccc------ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 531 DFGLSRKMYLQDY------YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 531 DfGla~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
|||++........ ........++..|+|||.......+.++||||||+++|||++| ..||......+....+.
T Consensus 136 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~ 214 (265)
T cd05579 136 DFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVG-IPPFHGETPEEIFQNIL 214 (265)
T ss_pred ecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHh
Confidence 9999875432211 0112233456789999999988899999999999999999995 56888888888888877
Q ss_pred cCCccCCCCCC--cHHHHHHHHHhhccCCCCCCCH---HHHHHHHH
Q psy5539 605 EGNILQAPDNT--PDALYDLMKLCWNMKPMNRPSF---RTIYQTLW 645 (653)
Q Consensus 605 ~~~~~~~~~~~--~~~l~~li~~cl~~dP~~RPs~---~eil~~L~ 645 (653)
.+.. ..+... +..+.+++.+||+.+|.+|||+ .+++++.|
T Consensus 215 ~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~ 259 (265)
T cd05579 215 NGKI-EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPF 259 (265)
T ss_pred cCCc-CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCcc
Confidence 6543 344444 8999999999999999999999 77777665
No 307
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=7.7e-35 Score=298.62 Aligned_cols=254 Identities=25% Similarity=0.332 Sum_probs=205.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc----ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE----ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~----~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
.+|++.+.||+|+||.||+|+.. .++..||+|.+... ........+.+|++++++++|+||+++++.+...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDA-----DTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEc-----CCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC
Confidence 57889999999999999999863 35678999987432 1223445789999999999999999999998654
Q ss_pred --CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 441 --KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 441 --~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
...++++||+++++|.+++.. ...+++..+..++.||+.||.|||+.+++|+||||+|
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~~~~--------------------~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~n 136 (264)
T cd06653 77 EEKKLSIFVEYMPGGSIKDQLKA--------------------YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGAN 136 (264)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence 458899999999999999862 2347888899999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCcccccccccc-ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDY-YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
|++++++.++|+|||+++....... ........++..|+|||.+.+..++.++||||||+++|||++| .+||......
T Consensus 137 i~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g-~~p~~~~~~~ 215 (264)
T cd06653 137 ILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTE-KPPWAEYEAM 215 (264)
T ss_pred EEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhC-CCCCCccCHH
Confidence 9999999999999999976422110 0111223467889999999988899999999999999999995 4688776655
Q ss_pred HHHHHHH-cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 598 EVVKYIK-EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 598 e~~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.+..+. .+.....++..++.+.+++.+||. +|.+||+..++++|++
T Consensus 216 ~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~ 263 (264)
T cd06653 216 AAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPF 263 (264)
T ss_pred HHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCC
Confidence 5444443 333345677788999999999999 5799999999988753
No 308
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.3e-35 Score=306.63 Aligned_cols=254 Identities=22% Similarity=0.368 Sum_probs=207.7
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.++|.+.+.||+|+||.||++... .++..|++|.+..... ...+.+.+|+.++++++||||+++++++...+..
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~ 91 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDV-----ATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGDEL 91 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEc-----CCCCEEEEEEeccccc-hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcE
Confidence 357889999999999999999753 3457899999864332 2345688999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++|+||+++++|.+++.. ..+++.++..++.|++.||.|||+++++|+||||+||++++
T Consensus 92 ~lv~e~~~~~~L~~~~~~---------------------~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~ 150 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTE---------------------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 150 (293)
T ss_pred EEEEecCCCCcHHHHHhh---------------------cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC
Confidence 999999999999999861 24678899999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
++.++|+|||++........ ......++..|+|||.+....++.++||||||+++|++++| .+||...+..+.+..+
T Consensus 151 ~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g-~~pf~~~~~~~~~~~~ 227 (293)
T cd06647 151 DGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG-EPPYLNENPLRALYLI 227 (293)
T ss_pred CCCEEEccCcceeccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhC-CCCCCCCChhhheeeh
Confidence 99999999999875533221 12233567889999999888899999999999999999995 5688766554433333
Q ss_pred HcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 604 KEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 604 ~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
..+.. ...++..+..+.+++++||..+|++||++.+++.+.|--
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~ 273 (293)
T cd06647 228 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (293)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHh
Confidence 22221 122345678899999999999999999999999997643
No 309
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.7e-35 Score=303.79 Aligned_cols=254 Identities=24% Similarity=0.394 Sum_probs=203.1
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
+|++.+.||+|++|.||+|+.. .++..||||.++..........+.+|+.++++++|+||+++++++...+..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNR-----TTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEEC-----CCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEE
Confidence 4788999999999999999863 35688999998765443344567889999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
||||+++ +|.+++.... ....+++..+..++.|++.||.|||+.+++|+||||+||++++++
T Consensus 76 v~e~~~~-~l~~~~~~~~-----------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~ 137 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHG-----------------VRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG 137 (284)
T ss_pred EEecCCc-cHHHHHHhcC-----------------CCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC
Confidence 9999985 8999886321 124589999999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
.++|+|||++....... .......++..|++||.+.+. .++.++||||||+++|||++| .+||.+.+..+....+.
T Consensus 138 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g-~~~~~~~~~~~~~~~~~ 214 (284)
T cd07836 138 ELKLADFGLARAFGIPV--NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITG-RPLFPGTNNEDQLLKIF 214 (284)
T ss_pred cEEEeecchhhhhcCCc--cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCcHHHHHHHH
Confidence 99999999997543211 112234457789999988664 578999999999999999995 56887766555444332
Q ss_pred cCC--------------------cc--------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EGN--------------------IL--------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~~--------------------~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
... .. ...+..+..+.+++.+|++.+|.+||++.+++++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~ 283 (284)
T cd07836 215 RIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283 (284)
T ss_pred HHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 110 00 001235678899999999999999999999998754
No 310
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=3.3e-35 Score=312.67 Aligned_cols=254 Identities=23% Similarity=0.289 Sum_probs=199.0
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC---
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--- 440 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--- 440 (653)
.++|.+.+.||+|+||.||+|+.. .++..||||.++..........+.+|+.++++++|+||+++++++...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 78 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHK-----PTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFE 78 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEc-----CCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccccc
Confidence 357999999999999999999863 356789999987544344456688999999999999999999987543
Q ss_pred --CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 441 --KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 441 --~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
...++|+||+.+ +|.++++ ...+++..+..++.|++.||.|||+.+|+||||||+|
T Consensus 79 ~~~~~~lv~e~~~~-~l~~~~~---------------------~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~N 136 (336)
T cd07849 79 SFNDVYIVQELMET-DLYKLIK---------------------TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSN 136 (336)
T ss_pred ccceEEEEehhccc-CHHHHHh---------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH
Confidence 357999999974 8887764 2358899999999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCcccccccccccc-CCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYYK-GDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
||+++++.+||+|||+++......... ......++..|+|||.+.+ ..++.++||||||+++|||++| .+||.+.+.
T Consensus 137 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G-~~~f~~~~~ 215 (336)
T cd07849 137 LLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSN-RPLFPGKDY 215 (336)
T ss_pred EEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCH
Confidence 999999999999999997653322111 1122456788999998765 4689999999999999999995 568866554
Q ss_pred HHHHHHHHc---------------C---------Ccc------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 597 EEVVKYIKE---------------G---------NIL------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 597 ~e~~~~i~~---------------~---------~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
......+.+ . ... ......+.++.+++.+||+.+|++|||+.+++++.|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~ 294 (336)
T cd07849 216 LHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPY 294 (336)
T ss_pred HHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 332221111 0 000 011235678999999999999999999999999865
No 311
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=4.3e-35 Score=302.81 Aligned_cols=246 Identities=25% Similarity=0.308 Sum_probs=199.9
Q ss_pred ecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 373 LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
||+|+||+||+|... .+++.+|+|.+.... .......+.+|++++++++||||+++++++...+..++||||+
T Consensus 1 lg~g~~g~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVK-----ATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEc-----CCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecC
Confidence 699999999999853 356789999986432 1223445678999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++++|.+++.... ...+++.+++.++.|++.||.|||+.+++|+||+|+||++++++.++|+
T Consensus 76 ~~~~L~~~l~~~~------------------~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~ 137 (277)
T cd05577 76 NGGDLKYHIYNVG------------------EPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRIS 137 (277)
T ss_pred CCCcHHHHHHHcC------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEc
Confidence 9999999986221 1357899999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHcC
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH----EEVVKYIKEG 606 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~----~e~~~~i~~~ 606 (653)
|||++..... ........++..|+|||.+.++.++.++||||||+++|+|++|. .||..... .++...+..
T Consensus 138 dfg~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~-~p~~~~~~~~~~~~~~~~~~~- 212 (277)
T cd05577 138 DLGLAVELKG---GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGR-SPFRQRKEKVEKEELKRRTLE- 212 (277)
T ss_pred cCcchhhhcc---CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCC-CCCCCCcccccHHHHHhcccc-
Confidence 9999875422 11222345677899999999888999999999999999999954 57765543 233332222
Q ss_pred CccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHHH
Q psy5539 607 NILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLWN 646 (653)
Q Consensus 607 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~~ 646 (653)
.....+...++.+.+++.+||+.+|.+|| ++.+++++.|-
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~ 257 (277)
T cd05577 213 MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLF 257 (277)
T ss_pred ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhh
Confidence 22345566889999999999999999999 88889988764
No 312
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.6e-35 Score=327.58 Aligned_cols=264 Identities=19% Similarity=0.205 Sum_probs=194.5
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCC----------ccceE----EEEEEccccccHHHHHHHHHHHHHHhhCCCCc
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKH----------EEFTL----VAVKMLKDEASEYLQTDFEREACLLAEFDHPN 429 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~----------~~~~~----VAVK~l~~~~~~~~~~~f~~Ei~il~~l~Hpn 429 (653)
.++|++++.||+|+||+||++........ ..+.. ++.|.++ ........+++|+.++++++|||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~--~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK--AGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh--cchHHHHHHHHHHHHHHhCCCCC
Confidence 46899999999999999999875321100 00011 1112222 12234456889999999999999
Q ss_pred cceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q psy5539 430 IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKF 509 (653)
Q Consensus 430 Iv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~i 509 (653)
||++++++...+..++|+|++. ++|.+++..... ..........+..|+.||+.||+|||+++|
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~---------------~~~~~~~~~~~~~i~~ql~~aL~yLH~~gI 288 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAF---------------DWKDRPLLKQTRAIMKQLLCAVEYIHDKKL 288 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccc---------------cccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence 9999999999999999999985 588888752210 111223456778899999999999999999
Q ss_pred eecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCC
Q psy5539 510 VHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589 (653)
Q Consensus 510 vHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~ 589 (653)
+||||||+|||++.++.+||+|||+++.+..... .......++..|+|||.+.+..++.++|||||||++|||++++..
T Consensus 289 iHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 289 IHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred ecCCCCHHHEEECCCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999999976532211 122335688999999999999999999999999999999998877
Q ss_pred CCCCCC---HHHHHHHHH---------------------cCCccCCC---------CCCcHHHHHHHHHhhccCCCCCCC
Q psy5539 590 PYYGLT---HEEVVKYIK---------------------EGNILQAP---------DNTPDALYDLMKLCWNMKPMNRPS 636 (653)
Q Consensus 590 p~~~~~---~~e~~~~i~---------------------~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs 636 (653)
|+.+.. ..++.+.+. .......+ ...+.++.+++.+|++.||.+|||
T Consensus 368 p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rps 447 (501)
T PHA03210 368 PIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPG 447 (501)
T ss_pred CccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcC
Confidence 775432 122222221 11110011 124567788899999999999999
Q ss_pred HHHHHHHHHH
Q psy5539 637 FRTIYQTLWN 646 (653)
Q Consensus 637 ~~eil~~L~~ 646 (653)
+.|++++.|.
T Consensus 448 a~elL~hp~f 457 (501)
T PHA03210 448 AAELLALPLF 457 (501)
T ss_pred HHHHhhChhh
Confidence 9999998874
No 313
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.7e-35 Score=307.57 Aligned_cols=257 Identities=25% Similarity=0.367 Sum_probs=204.0
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecC-
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVG- 440 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~- 440 (653)
+.++|++.+.||+|+||.||+|... .++..||+|.++.... ......+.+|+.++++++|+||+++++++...
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 79 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDT-----TSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH 79 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEEC-----CCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC
Confidence 3467899999999999999999864 3567899999864322 22233467899999999999999999998654
Q ss_pred -CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 441 -KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 441 -~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
+..++||||+.+ +|.+++... ...+++.+++.++.||+.||+|||+.+++||||||+||
T Consensus 80 ~~~~~lv~e~~~~-~l~~~l~~~-------------------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~ni 139 (309)
T cd07845 80 LDSIFLVMEYCEQ-DLASLLDNM-------------------PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNL 139 (309)
T ss_pred CCeEEEEEecCCC-CHHHHHHhc-------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 568999999964 899888621 14588999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
++++++.+||+|||++....... ........+..|+|||.+.+ ..++.++||||||+++|||++| .+||.+.+..+
T Consensus 140 l~~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g-~~~f~~~~~~~ 216 (309)
T cd07845 140 LLTDKGCLKIADFGLARTYGLPA--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAH-KPLLPGKSEIE 216 (309)
T ss_pred EECCCCCEEECccceeeecCCcc--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhC-CCCCCCCCHHH
Confidence 99999999999999997653322 11222334678999999876 4579999999999999999995 56888877776
Q ss_pred HHHHHHcCCc---------------------cCC--------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 599 VVKYIKEGNI---------------------LQA--------PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 599 ~~~~i~~~~~---------------------~~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
.+..+.+... ... ....+..+.++|.+|++.||++|||++++++|.|--
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~ 294 (309)
T cd07845 217 QLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294 (309)
T ss_pred HHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 6655543100 000 012467889999999999999999999999998754
No 314
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.2e-35 Score=306.41 Aligned_cols=257 Identities=23% Similarity=0.346 Sum_probs=201.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~~~ 443 (653)
+++...+.||+|+||.||+++.. .++..+|+|.+...........+.+|+.++.++. |+||+++++++..++..
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~ 78 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHK-----PSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDC 78 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEEC-----CCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcE
Confidence 45666788999999999999864 3568899999876544455667899999999996 99999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCCEeEc
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNCLIN 522 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-~ivHrDLkp~NILl~ 522 (653)
+++|||+.. +|.++..... ......+++..+..++.|++.||+|||+. +++||||||+|||++
T Consensus 79 ~~~~e~~~~-~l~~l~~~~~---------------~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~ 142 (288)
T cd06616 79 WICMELMDI-SLDKFYKYVY---------------EVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD 142 (288)
T ss_pred EEEEecccC-CHHHHHHHHH---------------HhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc
Confidence 999999864 6666543110 01235689999999999999999999975 999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC---CCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-HH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN---KYTVESDVWAFGVCLWEIFSFALQPYYGLTH-EE 598 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~-~e 598 (653)
+++.+||+|||+++...... ......++..|+|||.+... .++.++||||||+++|||++|. .||..... .+
T Consensus 143 ~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~-~p~~~~~~~~~ 218 (288)
T cd06616 143 RNGNIKLCDFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGK-FPYPKWNSVFD 218 (288)
T ss_pred cCCcEEEeecchhHHhccCC---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCC-CCchhcchHHH
Confidence 99999999999997543221 11233567889999998876 6899999999999999999955 57765432 22
Q ss_pred HHHHHHcCCccCC----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 599 VVKYIKEGNILQA----PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 599 ~~~~i~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.+..+..+..... +..++.++.+|+.+||+.+|++|||+++|+++.|-
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~ 270 (288)
T cd06616 219 QLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFI 270 (288)
T ss_pred HHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 2233222222221 12478899999999999999999999999998764
No 315
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.2e-34 Score=294.20 Aligned_cols=251 Identities=26% Similarity=0.445 Sum_probs=211.5
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|.+.+.||+|++|.||+|+.. ..+..|++|.+..... +...+.+.+|++++++++|+|++++++++..+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNL-----ETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEc-----CCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEE
Confidence 4677899999999999999863 3457899999876532 234567999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+++||+++++|.+++.. ...+++..+..++.|++.||.|||+.+++|+||+|+||+++++
T Consensus 76 ~v~e~~~~~~L~~~~~~--------------------~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~ 135 (254)
T cd06627 76 IILEYAENGSLRQIIKK--------------------FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKD 135 (254)
T ss_pred EEEecCCCCcHHHHHHh--------------------ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCC
Confidence 99999999999999862 2458899999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
+.++|+|||++........ ......++..|+|||...+..++.++||||||+++|+|++|. .|+...+.......+.
T Consensus 136 ~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~-~p~~~~~~~~~~~~~~ 212 (254)
T cd06627 136 GVVKLADFGVATKLNDVSK--DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGN-PPYYDLNPMAALFRIV 212 (254)
T ss_pred CCEEEeccccceecCCCcc--cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCC-CCCCCccHHHHHHHHh
Confidence 9999999999986543221 123345678899999998888999999999999999999965 5777666555555555
Q ss_pred cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 605 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
.......+...+..+.+++.+||..+|++||++.+++.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~ 252 (254)
T cd06627 213 QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHP 252 (254)
T ss_pred ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCC
Confidence 5555566778899999999999999999999999998764
No 316
>KOG0574|consensus
Probab=100.00 E-value=9.5e-38 Score=305.28 Aligned_cols=250 Identities=23% Similarity=0.402 Sum_probs=216.1
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
-|.++.+||+|+||.||+|.+ .+.|..+|||.+.-+. ..+++..|+.+|.+.+.|++|++||.+.....+++
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH-----~EsG~v~AIK~VPV~s---DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWI 105 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIH-----RESGHVLAIKKVPVDT---DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWI 105 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHH-----hccCcEEEEEecCccc---hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEe
Confidence 377889999999999999974 4788999999997643 24578899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
||||+..|++.+.++. ...+|++.++..+++..++||+|||...=+|||||+.|||++.+|
T Consensus 106 VMEYCGAGSiSDI~R~-------------------R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G 166 (502)
T KOG0574|consen 106 VMEYCGAGSISDIMRA-------------------RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDG 166 (502)
T ss_pred ehhhcCCCcHHHHHHH-------------------hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccc
Confidence 9999999999999983 346799999999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKE 605 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~ 605 (653)
.+||+|||.+..+. +.........||+.|||||++..-.|+.++||||||++..||.. |.+||.+..+-..+-.|..
T Consensus 167 ~AKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAE-G~PPYsDIHPMRAIFMIPT 243 (502)
T KOG0574|consen 167 IAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAE-GRPPYSDIHPMRAIFMIPT 243 (502)
T ss_pred hhhhhhccccchhh--hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhc-CCCCcccccccceeEeccC
Confidence 99999999996543 22233345678999999999999999999999999999999998 6679988776555555544
Q ss_pred CCcc--CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 606 GNIL--QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 606 ~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
...+ ..|+.+++++-++++.|+-++|++|-|+.++++|.+
T Consensus 244 ~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~F 285 (502)
T KOG0574|consen 244 KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTF 285 (502)
T ss_pred CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhh
Confidence 4332 235678899999999999999999999999999864
No 317
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=8.6e-35 Score=303.63 Aligned_cols=258 Identities=22% Similarity=0.347 Sum_probs=204.5
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeEEec
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGVCAV 439 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~ 439 (653)
.+..++|.+.+.||+|+||.||+|+.. .++..||||.++.........++.+|+.++.+.. |+||+++++++..
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~ 85 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFK-----KTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT 85 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEEC-----CCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec
Confidence 455678899999999999999999864 2468899999976544444556777887776765 9999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCC
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVHRDLATRN 518 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivHrDLkp~N 518 (653)
+...+++|||++ ++|.+++.. ....+++..+..++.||+.||+|||+ .+|+||||+|+|
T Consensus 86 ~~~~~~v~e~~~-~~l~~l~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~n 145 (296)
T cd06618 86 DSDVFICMELMS-TCLDKLLKR-------------------IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSN 145 (296)
T ss_pred CCeEEEEeeccC-cCHHHHHHH-------------------hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHH
Confidence 999999999985 477777652 12368899999999999999999997 599999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCC----CCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK----YTVESDVWAFGVCLWEIFSFALQPYYGL 594 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~----~t~ksDVwSlGvvl~ellt~~~~p~~~~ 594 (653)
|++++++.+||+|||++..+.... ......++..|+|||.+.+.. ++.++||||||+++|||++|. .||...
T Consensus 146 ill~~~~~~kL~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~-~p~~~~ 221 (296)
T cd06618 146 ILLDASGNVKLCDFGISGRLVDSK---AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ-FPYKNC 221 (296)
T ss_pred EEEcCCCCEEECccccchhccCCC---cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCC-CCCCcc
Confidence 999999999999999987543211 112334677899999987654 789999999999999999955 577553
Q ss_pred C-HHHHHHHHHcCCccCCC--CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 595 T-HEEVVKYIKEGNILQAP--DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 595 ~-~~e~~~~i~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
. ..+....+........+ ..++.++.+++.+||+.+|.+||++.+++++.|-.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~ 277 (296)
T cd06618 222 KTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277 (296)
T ss_pred hhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence 2 33445444444332222 24688999999999999999999999999998743
No 318
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=5.4e-35 Score=302.85 Aligned_cols=245 Identities=20% Similarity=0.283 Sum_probs=192.2
Q ss_pred eecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHH---HhhCCCCccceEEeEEecCCceEEE
Q psy5539 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACL---LAEFDHPNIVKLLGVCAVGKPMCLL 446 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~i---l~~l~HpnIv~l~g~~~~~~~~~LV 446 (653)
.||+|+||.||++... .+++.+|+|.+..... ......+.+|..+ +...+||||+.+++++..++..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEEC-----CCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEE
Confidence 3899999999999863 3567899998864321 1122234444433 3344799999999999999999999
Q ss_pred EeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCc
Q psy5539 447 FEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV 526 (653)
Q Consensus 447 ~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~ 526 (653)
|||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+|+||||||+|||+++++.
T Consensus 76 ~e~~~~~~L~~~i~~--------------------~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~ 135 (279)
T cd05633 76 LDLMNGGDLHYHLSQ--------------------HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGH 135 (279)
T ss_pred EecCCCCCHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCC
Confidence 999999999998862 235899999999999999999999999999999999999999999
Q ss_pred EEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Q psy5539 527 VKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTH--EEVVKYI 603 (653)
Q Consensus 527 vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~--~e~~~~i 603 (653)
++|+|||++...... ......++..|+|||.+.. ..++.++||||||+++|||++|. .||..... .+.....
T Consensus 136 ~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~-~pf~~~~~~~~~~~~~~ 210 (279)
T cd05633 136 VRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGH-SPFRQHKTKDKHEIDRM 210 (279)
T ss_pred EEEccCCcceecccc----CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC-CCcCCCCCcCHHHHHHH
Confidence 999999998654211 1223457889999999864 56899999999999999999955 47754322 1222222
Q ss_pred HcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHHH
Q psy5539 604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLWN 646 (653)
Q Consensus 604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~~ 646 (653)
........++.++.++.+++.+||..||.+|| +++++++|+|.
T Consensus 211 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~ 258 (279)
T cd05633 211 TLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFF 258 (279)
T ss_pred hhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccc
Confidence 22223345667889999999999999999999 69999998764
No 319
>KOG0579|consensus
Probab=100.00 E-value=9.6e-37 Score=322.07 Aligned_cols=253 Identities=27% Similarity=0.438 Sum_probs=213.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+-+.++..||.|+||+||+|..+ .++...|-|++... ++...++|.-||+||+..+||+||+|++.|...+.++
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nk-----et~~lAAaKvIetk-seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLw 105 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNK-----ETKLLAAAKVIETK-SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLW 105 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcc-----cchhhhhhhhhccc-chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceE
Confidence 34677888999999999999743 45556677777543 3445678999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
|+.|||+||-....+- .-...|++.++.-+++|++.+|.|||+++|||||||+.|||++-+
T Consensus 106 iliEFC~GGAVDaiml-------------------EL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld 166 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIML-------------------ELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD 166 (1187)
T ss_pred EEEeecCCchHhHHHH-------------------HhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec
Confidence 9999999998887664 234578999999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
|.++|+|||.+..... .........||+.|||||+.. ...|+.++||||||++|.||.. ..+|-...++-.+
T Consensus 167 GdirLADFGVSAKn~~--t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAq-iEPPHhelnpMRV 243 (1187)
T KOG0579|consen 167 GDIRLADFGVSAKNKS--TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQ-IEPPHHELNPMRV 243 (1187)
T ss_pred CcEeeecccccccchh--HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhc-cCCCccccchHHH
Confidence 9999999999864321 122334567899999999875 4589999999999999999997 5578888888888
Q ss_pred HHHHHcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 600 VKYIKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 600 ~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+-.|..... +-.|..++..+.+++.+||.+||..||++.+|++|+|
T Consensus 244 llKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpf 291 (1187)
T KOG0579|consen 244 LLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPF 291 (1187)
T ss_pred HHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcc
Confidence 777765543 3456789999999999999999999999999999876
No 320
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=8.3e-35 Score=297.36 Aligned_cols=245 Identities=23% Similarity=0.342 Sum_probs=199.3
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHH-HhhCCCCccceEEeEEecCCceEEEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACL-LAEFDHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~i-l~~l~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
+.||+|+||.||+|... .+++.||+|.++.... ......+..|..+ ....+|+||+++++++..++..++|+
T Consensus 2 ~~l~~g~~~~v~~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKR-----STGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEec-----CCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEE
Confidence 46899999999999863 3557899999865321 1222334455444 45568999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcE
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVV 527 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~v 527 (653)
||+++++|.++++. ...++...+..++.||+.||.|||+.+++|+||+|+||++++++.+
T Consensus 77 e~~~~~~L~~~l~~--------------------~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~ 136 (260)
T cd05611 77 EYLNGGDCASLIKT--------------------LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHL 136 (260)
T ss_pred eccCCCCHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcE
Confidence 99999999999862 2357889999999999999999999999999999999999999999
Q ss_pred EEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Q psy5539 528 KIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGN 607 (653)
Q Consensus 528 kI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~ 607 (653)
||+|||+++.... .....++..|+|||.+.+..++.++||||||+++|||++ |..||...+..++...+..+.
T Consensus 137 ~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~ 209 (260)
T cd05611 137 KLTDFGLSRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLF-GYPPFHAETPDAVFDNILSRR 209 (260)
T ss_pred EEeecccceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhcc
Confidence 9999999875422 223456778999999998889999999999999999999 456898888888777776654
Q ss_pred cc---CCCCCCcHHHHHHHHHhhccCCCCCC---CHHHHHHHHHHH
Q psy5539 608 IL---QAPDNTPDALYDLMKLCWNMKPMNRP---SFRTIYQTLWNI 647 (653)
Q Consensus 608 ~~---~~~~~~~~~l~~li~~cl~~dP~~RP---s~~eil~~L~~l 647 (653)
.. .....++.++.+++.+||+.+|++|| ++++++.+.|-.
T Consensus 210 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~ 255 (260)
T cd05611 210 INWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFK 255 (260)
T ss_pred cCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhh
Confidence 32 12235789999999999999999999 457888887653
No 321
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4.2e-35 Score=302.10 Aligned_cols=254 Identities=22% Similarity=0.346 Sum_probs=213.2
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCC-CCccceEEeEEecCC
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFD-HPNIVKLLGVCAVGK 441 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~ 441 (653)
++|.+.+.||+|+||.||+|+.. .++..||+|++.... .......+.+|++++++++ |+||+++++++..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEK-----ETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEc-----CCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc
Confidence 46889999999999999999864 356889999987532 2334567889999999998 999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+++++|.++++. ...+++..++.++.|++.||.|||+.+++|+||+|+||++
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~--------------------~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i 135 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRK--------------------YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL 135 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE
Confidence 99999999999999999962 2368999999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccc------------------cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYY------------------KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI 583 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~------------------~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~el 583 (653)
+.++.++|+|||++......... .......++..|+|||......++.++||||||++++++
T Consensus 136 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l 215 (280)
T cd05581 136 DKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQM 215 (280)
T ss_pred CCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHH
Confidence 99999999999998765432211 111223457889999999988899999999999999999
Q ss_pred HhCCCCCCCCCCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCH----HHHHHHHH
Q psy5539 584 FSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSF----RTIYQTLW 645 (653)
Q Consensus 584 lt~~~~p~~~~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~eil~~L~ 645 (653)
++ +..||...+.......+.... ...+...+..+.+++.+||+.+|.+||++ ++++++.|
T Consensus 216 ~~-g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~ 279 (280)
T cd05581 216 LT-GKPPFRGSNEYLTFQKILKLE-YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279 (280)
T ss_pred Hh-CCCCCCCccHHHHHHHHHhcC-CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCC
Confidence 99 556888777666666665433 34667789999999999999999999999 99988764
No 322
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=4.4e-35 Score=305.13 Aligned_cols=253 Identities=25% Similarity=0.374 Sum_probs=200.8
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecC--C
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--K 441 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--~ 441 (653)
++|++.+.||+|+||.||+|+.. .+++.+++|.++.... +.....+.+|+.++++++||||+++++++... .
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 79 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDK-----KTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLD 79 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEEC-----CCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCC
Confidence 46788899999999999999864 3467899999875432 22334567899999999999999999998776 8
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++|+||++ ++|.+++... ...+++..++.++.||+.||+|||+.+++|+||||+|||+
T Consensus 80 ~~~lv~e~~~-~~L~~~~~~~-------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili 139 (293)
T cd07843 80 KIYMVMEYVE-HDLKSLMETM-------------------KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL 139 (293)
T ss_pred cEEEEehhcC-cCHHHHHHhc-------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE
Confidence 8999999997 4999988621 1358999999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
++++.+||+|||++....... .......++..|+|||.+.+.. ++.++|+||||+++|||++| .+||...+..+..
T Consensus 140 ~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g-~~~f~~~~~~~~~ 216 (293)
T cd07843 140 NNRGILKICDFGLAREYGSPL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTK-KPLFPGKSEIDQL 216 (293)
T ss_pred CCCCcEEEeecCceeeccCCc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhC-CCCCCCCChHHHH
Confidence 999999999999987653321 1122344577899999987654 68999999999999999995 5588776655544
Q ss_pred HHHHcCC---------------------c---------cCCCCC-CcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 601 KYIKEGN---------------------I---------LQAPDN-TPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 601 ~~i~~~~---------------------~---------~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..+.... . ...+.. .+..+.+++++||+.+|++|||+.|++++.|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~ 292 (293)
T cd07843 217 NKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292 (293)
T ss_pred HHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCC
Confidence 4332110 0 001112 4788999999999999999999999998754
No 323
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=8.7e-35 Score=300.82 Aligned_cols=252 Identities=28% Similarity=0.414 Sum_probs=201.1
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC--Cce
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--KPM 443 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--~~~ 443 (653)
|++.+.||+|+||.||+|+.. .++..+|+|.++... .......+.+|+++++.++|+|++++++++... +..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 75 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNK-----KTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSI 75 (287)
T ss_pred CeeeEEeccCCCeEEEEEEEC-----CCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcE
Confidence 467889999999999999864 346789999998653 233445688999999999999999999999887 899
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++|+||+++ +|.+++.. ....+++..++.++.||+.||+|||+.+++|+||+|+||++++
T Consensus 76 ~lv~e~~~~-~l~~~~~~-------------------~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~ 135 (287)
T cd07840 76 YMVFEYMDH-DLTGLLDS-------------------PEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN 135 (287)
T ss_pred EEEeccccc-cHHHHHhc-------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcC
Confidence 999999975 89888751 1145889999999999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
++.+||+|||++........ .......++..|+|||.+.+ ..++.++||||||+++|||++| ..||...+..+....
T Consensus 136 ~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~-~~p~~~~~~~~~~~~ 213 (287)
T cd07840 136 DGVLKLADFGLARPYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLG-KPIFQGSTELEQLEK 213 (287)
T ss_pred CCCEEEccccceeeccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhC-CCCCCCCChHHHHHH
Confidence 99999999999976543321 11233455778999998765 4678999999999999999996 568877766554444
Q ss_pred HHcCCcc-----------------------------C-CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKEGNIL-----------------------------Q-APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~~~~~-----------------------------~-~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+.+.... . ....++..+.+++++||+.+|.+||++++++++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~ 286 (287)
T cd07840 214 IFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286 (287)
T ss_pred HHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcC
Confidence 3321000 0 00113788999999999999999999999998764
No 324
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=5.8e-35 Score=298.52 Aligned_cols=258 Identities=28% Similarity=0.409 Sum_probs=205.8
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+|.+.+.||+|+||.||+++.... .......++|.+... ........+.+|+.++++++||||+++++++......+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKA--VAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFC 78 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCC--CCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceE
Confidence 467889999999999999986431 112223333333221 12222345778999999999999999999999888999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+|+||+++++|.+++.... .....+++..++.++.|++.||.|||+++++|+||+|+||++++
T Consensus 79 lv~e~~~~~~l~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~- 141 (260)
T cd08222 79 IITEYCEGRDLDCKLEELK----------------HTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN- 141 (260)
T ss_pred EEEEeCCCCCHHHHHHHHh----------------hcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-
Confidence 9999999999999986321 12346899999999999999999999999999999999999976
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
+.++|+|||++........ ......++..|+|||.+.+..++.++||||||+++|+|+++. .|+......+....+.
T Consensus 142 ~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~-~~~~~~~~~~~~~~~~ 218 (260)
T cd08222 142 NLLKIGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLA-HAFEGQNFLSVVLRIV 218 (260)
T ss_pred CCEeecccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCC-CCCCCccHHHHHHHHH
Confidence 5699999999876532221 122334677899999998888999999999999999999955 4777777777777776
Q ss_pred cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.....+...+.++.++|.+||..+|++||++.+++++.|
T Consensus 219 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 259 (260)
T cd08222 219 EGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPF 259 (260)
T ss_pred cCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCC
Confidence 77666667778899999999999999999999999998865
No 325
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.4e-34 Score=301.24 Aligned_cols=257 Identities=23% Similarity=0.351 Sum_probs=198.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCC-CCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFD-HPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~~ 442 (653)
++|++.+.||+|+||.||+|... .+++.||||.++.... ......+.+|+.+++.++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~-----~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~ 75 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDK-----NTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEK 75 (295)
T ss_pred CCceEeeEecccCCeEEEEEEEC-----CCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCC
Confidence 36888999999999999999864 3567899998865422 223356788999999995 6999999999876655
Q ss_pred -----eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 443 -----MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 443 -----~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
.++||||+++ +|.+++..... .....+++..++.++.||+.||.|||+++|+||||||+
T Consensus 76 ~~~~~~~lv~e~~~~-~l~~~~~~~~~---------------~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~ 139 (295)
T cd07837 76 NGKPSLYLVFEYLDS-DLKKFMDSNGR---------------GPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQ 139 (295)
T ss_pred CCCceEEEEeeccCc-CHHHHHHHhcc---------------cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChH
Confidence 8999999985 89998863211 11245799999999999999999999999999999999
Q ss_pred CEeEcC-CCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 518 NCLIND-QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 518 NILl~~-~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
||+++. ++.+||+|||+++...... .......+++.|+|||.+.+ ..++.++||||||+++|||++|. +||.+.+
T Consensus 140 nil~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~-~~~~~~~ 216 (295)
T cd07837 140 NLLVDKQKGLLKIADLGLGRAFSIPV--KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQ-PLFPGDS 216 (295)
T ss_pred HEEEecCCCeEEEeecccceecCCCc--cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCC-CCCCCCC
Confidence 999998 8999999999987542211 11123345778999998865 45799999999999999999964 5877665
Q ss_pred HHHHHHHHHcC----C---------------cc--------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 596 HEEVVKYIKEG----N---------------IL--------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 596 ~~e~~~~i~~~----~---------------~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..+....+... . .. ...+..+.++.+++.+||..+|.+||++++++.+.|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~ 293 (295)
T cd07837 217 ELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293 (295)
T ss_pred HHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCC
Confidence 43322222110 0 00 001346788999999999999999999999998765
No 326
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.4e-35 Score=352.33 Aligned_cols=243 Identities=24% Similarity=0.342 Sum_probs=189.5
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
.+...+.||+|+||.||+|+.. .++..||||+++.... ....|++.+++++|||||+++|++...+..++
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~l 760 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSI-----KNGMQFVVKEINDVNS-----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYL 760 (968)
T ss_pred hCCcccEEccCCCeeEEEEEEC-----CCCcEEEEEEccCCcc-----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEE
Confidence 3455677999999999999863 3567899999875332 12356889999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhh---hCCceecCCCCCCEeEc
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLS---DRKFVHRDLATRNCLIN 522 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~ivHrDLkp~NILl~ 522 (653)
||||+++|+|.++++ .++|..+.+|+.|||+||+||| +.+|+||||||+||+++
T Consensus 761 v~Ey~~~g~L~~~l~-----------------------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~ 817 (968)
T PLN00113 761 IHEYIEGKNLSEVLR-----------------------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID 817 (968)
T ss_pred EEeCCCCCcHHHHHh-----------------------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC
Confidence 999999999999985 2688999999999999999999 66999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC--HHHHH
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT--HEEVV 600 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~--~~e~~ 600 (653)
.++.+++. ||...... ......++..|||||++.+..++.++|||||||++|||++|.. ||.... ...+.
T Consensus 818 ~~~~~~~~-~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~-p~~~~~~~~~~~~ 889 (968)
T PLN00113 818 GKDEPHLR-LSLPGLLC------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKS-PADAEFGVHGSIV 889 (968)
T ss_pred CCCceEEE-eccccccc------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCC-CCCcccCCCCcHH
Confidence 99988875 66654321 1223367889999999999999999999999999999999665 653211 11111
Q ss_pred HHHH------------cCCccC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 601 KYIK------------EGNILQ---APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 601 ~~i~------------~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
+..+ +..... .+.....++.+++.+||+.+|++|||++++++.|+.+.+
T Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 890 EWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred HHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 1111 000000 011122467789999999999999999999999988755
No 327
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.2e-34 Score=303.78 Aligned_cols=255 Identities=25% Similarity=0.428 Sum_probs=196.5
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC--
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK-- 441 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~-- 441 (653)
++|.+.+.||+|+||.||+|+.. .++..||||.+.... .+.....+.+|++++++++||||+++++++...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHK-----KTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP 86 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEEC-----CCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccc
Confidence 47899999999999999999864 356899999886432 2222345678999999999999999999986544
Q ss_pred ------ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539 442 ------PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515 (653)
Q Consensus 442 ------~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk 515 (653)
..++||||+.+ +|.+++.. ....+++.+++.++.||+.||+|||+++++|+|||
T Consensus 87 ~~~~~~~~~lv~e~~~~-~l~~~l~~-------------------~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~ 146 (310)
T cd07865 87 YNRYKGSFYLVFEFCEH-DLAGLLSN-------------------KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMK 146 (310)
T ss_pred ccCCCceEEEEEcCCCc-CHHHHHHh-------------------cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence 45999999964 88888751 12358899999999999999999999999999999
Q ss_pred CCCEeEcCCCcEEEeccCccccccccccc--cCCCCCCCccccccchhhccCC-CCCchhHHHHHHHHHHHHhCCCCCCC
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDYY--KGDENDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFSFALQPYY 592 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~-~t~ksDVwSlGvvl~ellt~~~~p~~ 592 (653)
|+||++++++.+||+|||++......... .......++..|+|||.+.+.. ++.++||||||+++|||++| .+||.
T Consensus 147 p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~-~~~~~ 225 (310)
T cd07865 147 AANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTR-SPIMQ 225 (310)
T ss_pred HHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhC-CCCCC
Confidence 99999999999999999999765332211 1112334677899999887654 78999999999999999994 56887
Q ss_pred CCCHHHHHHHHHc--CCc----------------cCCC-------------CCCcHHHHHHHHHhhccCCCCCCCHHHHH
Q psy5539 593 GLTHEEVVKYIKE--GNI----------------LQAP-------------DNTPDALYDLMKLCWNMKPMNRPSFRTIY 641 (653)
Q Consensus 593 ~~~~~e~~~~i~~--~~~----------------~~~~-------------~~~~~~l~~li~~cl~~dP~~RPs~~eil 641 (653)
+.+.......+.. +.. ...+ ...+..+.+++.+||..+|.+|||+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l 305 (310)
T cd07865 226 GNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTAL 305 (310)
T ss_pred CCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence 7665443332222 000 0000 11246678999999999999999999999
Q ss_pred HHHH
Q psy5539 642 QTLW 645 (653)
Q Consensus 642 ~~L~ 645 (653)
++.|
T Consensus 306 ~h~~ 309 (310)
T cd07865 306 NHDF 309 (310)
T ss_pred cCCC
Confidence 8765
No 328
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.2e-34 Score=308.59 Aligned_cols=251 Identities=23% Similarity=0.262 Sum_probs=198.3
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC--
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG-- 440 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~-- 440 (653)
.++|+..+.||+|+||.||+|+.. .++..||||.++.. ........+.+|+.++++++|+||+++++++...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDT-----VTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKS 89 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEEC-----CCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCC
Confidence 467899999999999999999863 35678999998643 2333445677899999999999999999988643
Q ss_pred ----CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 441 ----KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 441 ----~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
...++||||+. ++|.+++. ..++...+..++.|++.||+|||+.+|+||||||
T Consensus 90 ~~~~~~~~lv~e~~~-~~l~~~~~----------------------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp 146 (353)
T cd07850 90 LEEFQDVYLVMELMD-ANLCQVIQ----------------------MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 146 (353)
T ss_pred ccccCcEEEEEeccC-CCHHHHHh----------------------hcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCH
Confidence 35799999996 58888775 1278888999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+|||+++++.+||+|||+++...... ......++..|+|||.+.+..++.++||||||+++|+|++|. .||...+.
T Consensus 147 ~Nil~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~-~pf~~~~~ 222 (353)
T cd07850 147 SNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGT-VLFPGTDH 222 (353)
T ss_pred HHEEECCCCCEEEccCccceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCC-CCCCCCCH
Confidence 99999999999999999997653221 122335678899999999999999999999999999999955 47766554
Q ss_pred HHHHHHHHc-----------------------CCcc-------------------CCCCCCcHHHHHHHHHhhccCCCCC
Q psy5539 597 EEVVKYIKE-----------------------GNIL-------------------QAPDNTPDALYDLMKLCWNMKPMNR 634 (653)
Q Consensus 597 ~e~~~~i~~-----------------------~~~~-------------------~~~~~~~~~l~~li~~cl~~dP~~R 634 (653)
.+....+.. .... ..+...+..+.+++.+||+.||++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 302 (353)
T cd07850 223 IDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKR 302 (353)
T ss_pred HHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhC
Confidence 332222211 0000 0011245678999999999999999
Q ss_pred CCHHHHHHHHHH
Q psy5539 635 PSFRTIYQTLWN 646 (653)
Q Consensus 635 Ps~~eil~~L~~ 646 (653)
||+.+++++.|-
T Consensus 303 ~t~~eiL~~~~~ 314 (353)
T cd07850 303 ISVDDALQHPYI 314 (353)
T ss_pred cCHHHHhcChhH
Confidence 999999999864
No 329
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.1e-34 Score=304.88 Aligned_cols=253 Identities=22% Similarity=0.411 Sum_probs=205.7
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
.+.|...+.||+|+||.||+|+.. .++..+|+|.+... .......++.+|+++++.++|+|++++++++....
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 88 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 88 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEc-----CCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC
Confidence 345677788999999999999864 34578999988632 23334456889999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+. |+|.+++.. ....+++..+..++.|++.||.|||+.+++||||+|+|||+
T Consensus 89 ~~~lv~e~~~-~~l~~~~~~-------------------~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~ 148 (308)
T cd06634 89 TAWLVMEYCL-GSASDLLEV-------------------HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL 148 (308)
T ss_pred eeEEEEEccC-CCHHHHHHH-------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE
Confidence 9999999996 688887751 12347889999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL---YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
++++.++|+|||++..... .....++..|+|||.+. .+.++.++||||||+++|||++|. .|+...+..+
T Consensus 149 ~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~-~p~~~~~~~~ 221 (308)
T cd06634 149 SEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK-PPLFNMNAMS 221 (308)
T ss_pred CCCCcEEECCcccceeecC------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCC-CCCccccHHH
Confidence 9999999999999875422 22345677899999975 356889999999999999999955 5777766655
Q ss_pred HHHHHHcCCccC-CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 599 VVKYIKEGNILQ-APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 599 ~~~~i~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
....+..+.... .....+..+.+++.+||+.+|.+||++.+++++.|.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 222 ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred HHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 555555444332 23467888999999999999999999999999887543
No 330
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=7.5e-35 Score=304.42 Aligned_cols=257 Identities=25% Similarity=0.411 Sum_probs=201.7
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
...++|++.+.||+|+||.||+|... .+++.||+|.++... .......+.+|++++++++||||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~ 78 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDK-----DTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDK 78 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEEC-----CCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCc
Confidence 34567889999999999999999974 345789999987542 222335678899999999999999999998765
Q ss_pred C----------ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCce
Q psy5539 441 K----------PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFV 510 (653)
Q Consensus 441 ~----------~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~iv 510 (653)
. ..++|+||+++ +|.+++.. ....+++..+..++.||+.||+|||+.+|+
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~-------------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~ 138 (302)
T cd07864 79 QDALDFKKDKGAFYLVFEYMDH-DLMGLLES-------------------GLVHFSEDHIKSFMKQLLEGLNYCHKKNFL 138 (302)
T ss_pred chhhhccccCCcEEEEEcccCc-cHHHHHhc-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4 78999999976 77777651 124589999999999999999999999999
Q ss_pred ecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCC
Q psy5539 511 HRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQ 589 (653)
Q Consensus 511 HrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~ 589 (653)
|+||||+||++++++.+||+|||++........ ........+..|+|||.+.+. .++.++||||||+++|||++| .+
T Consensus 139 H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g-~~ 216 (302)
T cd07864 139 HRDIKCSNILLNNKGQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTK-KP 216 (302)
T ss_pred cCCCCHHHEEECCCCcEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhC-CC
Confidence 999999999999999999999999976533221 112223456789999988654 578999999999999999995 56
Q ss_pred CCCCCCHHHHHHHHHcC---Ccc--------------------------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHH
Q psy5539 590 PYYGLTHEEVVKYIKEG---NIL--------------------------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640 (653)
Q Consensus 590 p~~~~~~~e~~~~i~~~---~~~--------------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei 640 (653)
||...+..+....+... ... .....++..+.+++..||+.+|.+||++.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i 296 (302)
T cd07864 217 IFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEA 296 (302)
T ss_pred CCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 88766655444333221 000 0112467899999999999999999999999
Q ss_pred HHHHH
Q psy5539 641 YQTLW 645 (653)
Q Consensus 641 l~~L~ 645 (653)
+++.|
T Consensus 297 l~~~~ 301 (302)
T cd07864 297 LNSPW 301 (302)
T ss_pred hcCCC
Confidence 88754
No 331
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.5e-34 Score=299.07 Aligned_cols=258 Identities=15% Similarity=0.256 Sum_probs=188.9
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHH----------HHHHHHHHHHHhhCCCCcc
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL----------QTDFEREACLLAEFDHPNI 430 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~----------~~~f~~Ei~il~~l~HpnI 430 (653)
++..++|++.+.||+|+||+||+|+..+. ......+|+|.......... ......+...+..++|+|+
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~--~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i 85 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASD--HCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGI 85 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCC--cccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence 45557899999999999999999987431 11235567775432211100 0112233445667799999
Q ss_pred ceEEeEEecCC----ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh
Q psy5539 431 VKLLGVCAVGK----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD 506 (653)
Q Consensus 431 v~l~g~~~~~~----~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~ 506 (653)
+++++.+.... ..++++|+... ++.+.+.. ....++..+..|+.|++.||+|||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------------------~~~~~~~~~~~i~~qi~~~l~~lH~ 144 (294)
T PHA02882 86 PKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKR--------------------IKCKNKKLIKNIMKDMLTTLEYIHE 144 (294)
T ss_pred CcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHh--------------------hccCCHHHHHHHHHHHHHHHHHHHh
Confidence 99998765433 34677777643 66666541 1234677889999999999999999
Q ss_pred CCceecCCCCCCEeEcCCCcEEEeccCccccccccccc-----cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHH
Q psy5539 507 RKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYY-----KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLW 581 (653)
Q Consensus 507 ~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ 581 (653)
.+|+||||||+|||+++++.++|+|||+|+........ .......+|+.|+|||.+.+..++.++||||||+++|
T Consensus 145 ~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~ 224 (294)
T PHA02882 145 HGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCML 224 (294)
T ss_pred CCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999765322111 1112245889999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCC-HHH--------HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 582 EIFSFALQPYYGLT-HEE--------VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 582 ellt~~~~p~~~~~-~~e--------~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
||++| ..||.+.. ..+ ....+..+.. .....+..+.+++..||..+|++||++.+|.+.+
T Consensus 225 el~~g-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 225 KWAGI-KLPWKGFGHNGNLIHAAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhC-CCCCCccccchHHHHHhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 99995 56887763 222 2333333332 2345788999999999999999999999998765
No 332
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.9e-34 Score=299.09 Aligned_cols=255 Identities=25% Similarity=0.368 Sum_probs=199.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
++|++.+.||+|++|.||+|+.. .+++.||+|.++.... ....+.+.+|++++++++|+||+++++++..+...
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDR-----VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEec-----CCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeE
Confidence 47889999999999999999863 3567899999864322 23345688999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||++ ++|.+++... ....+++..+..++.||+.||+|||+++++|+||+|+||++++
T Consensus 77 ~lv~e~~~-~~l~~~~~~~------------------~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~ 137 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSS------------------PDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR 137 (294)
T ss_pred EEEEeccc-ccHHHHHHhC------------------CCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC
Confidence 99999996 5888887521 1123577888899999999999999999999999999999985
Q ss_pred -CCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 524 -QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 524 -~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++.+||+|||++...... ........++..|+|||.+.+. .++.++||||||+++|+|++| .+||...+..+...
T Consensus 138 ~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg-~~pf~~~~~~~~~~ 214 (294)
T PLN00009 138 RTNALKLADFGLARAFGIP--VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQ-KPLFPGDSEIDELF 214 (294)
T ss_pred CCCEEEEcccccccccCCC--ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHHHHH
Confidence 567999999999754221 1111233557889999988764 578999999999999999995 56887665544333
Q ss_pred HHHc--CC------------------cc--------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 602 YIKE--GN------------------IL--------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 602 ~i~~--~~------------------~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.+.. +. .. ......+.++.+++.+|++.+|++||++.+++++.|-
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~ 287 (294)
T PLN00009 215 KIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYF 287 (294)
T ss_pred HHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchH
Confidence 2211 00 00 0123467889999999999999999999999998764
No 333
>KOG4717|consensus
Probab=100.00 E-value=2.4e-35 Score=305.88 Aligned_cols=251 Identities=24% Similarity=0.338 Sum_probs=217.4
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
-|.+.+.||+|-|+.|-+|++ -.+|..||||++.+.. .......+.+|++-|+.++|||||+||.+......+|
T Consensus 19 LYDLekTlG~GHFAVVKLArH-----VFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKly 93 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARH-----VFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLY 93 (864)
T ss_pred eehhhhhhcCCceehhhhhhh-----hcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEE
Confidence 366778899999999999874 4678899999996542 2334456789999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC-
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND- 523 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~- 523 (653)
||+|.-.+|||++|+-.+ ...+.+..+.+++.||+.++.|+|+..+|||||||+||.+.+
T Consensus 94 LiLELGD~GDl~DyImKH-------------------e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEK 154 (864)
T KOG4717|consen 94 LILELGDGGDLFDYIMKH-------------------EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEK 154 (864)
T ss_pred EEEEecCCchHHHHHHhh-------------------hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeee
Confidence 999999999999999632 356889999999999999999999999999999999998864
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCC-CchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT-VESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t-~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
-|-|||.|||++-.+..... -+...|+..|-|||.+.+..|+ ++.||||||||||.|.+ |.+||+..+..|.+-+
T Consensus 155 lGlVKLTDFGFSNkf~PG~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVC-Gq~PFqeANDSETLTm 230 (864)
T KOG4717|consen 155 LGLVKLTDFGFSNKFQPGKK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVC-GQPPFQEANDSETLTM 230 (864)
T ss_pred cCceEeeeccccccCCCcch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHh-CCCccccccchhhhhh
Confidence 58999999999865533322 2345678899999999999987 78999999999999998 5679999999999999
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
|.+-.. ..|..++.+.++||..||..||.+|.+.++|..+.|
T Consensus 231 ImDCKY-tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 231 IMDCKY-TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred hhcccc-cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence 988764 578899999999999999999999999999998876
No 334
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.2e-34 Score=299.17 Aligned_cols=248 Identities=20% Similarity=0.355 Sum_probs=206.4
Q ss_pred EeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEee
Q psy5539 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEY 449 (653)
Q Consensus 370 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey 449 (653)
...||+|+||.||++... .++..||||.+.... ......+.+|+.+++.++|+||+++++.+..++..++||||
T Consensus 25 ~~~lg~g~~g~v~~~~~~-----~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 25 FIKIGEGSTGIVCIATVK-----SSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred HHHcCCCCCeEEEEEEEc-----CCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 356999999999999863 356899999886433 33456789999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEE
Q psy5539 450 MGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529 (653)
Q Consensus 450 ~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI 529 (653)
+++++|.+++. ...+++..+..++.|++.||+|||+.+++|+||+|+||++++++.++|
T Consensus 99 ~~~~~L~~~~~---------------------~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l 157 (292)
T cd06657 99 LEGGALTDIVT---------------------HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKL 157 (292)
T ss_pred CCCCcHHHHHh---------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEE
Confidence 99999999874 124688899999999999999999999999999999999999999999
Q ss_pred eccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc-
Q psy5539 530 ADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI- 608 (653)
Q Consensus 530 ~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~- 608 (653)
+|||++....... .......++..|+|||.+....++.++||||||+++|||++|. .||.+....+....+.....
T Consensus 158 ~dfg~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~-~p~~~~~~~~~~~~~~~~~~~ 234 (292)
T cd06657 158 SDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE-PPYFNEPPLKAMKMIRDNLPP 234 (292)
T ss_pred cccccceeccccc--ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHhhCCc
Confidence 9999987543221 1122345678899999998888999999999999999999955 58877777666666554322
Q ss_pred -cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 609 -LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 609 -~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
.......+..+.+++.+||+.+|.+||++.+++++.|-.
T Consensus 235 ~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~ 274 (292)
T cd06657 235 KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLA 274 (292)
T ss_pred ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHh
Confidence 223345788999999999999999999999999987644
No 335
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=9.5e-35 Score=300.73 Aligned_cols=252 Identities=25% Similarity=0.415 Sum_probs=198.3
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
|++.+.||+|++|.||+|... .++..||+|+++.... ......+.+|++++++++||||+++++++..++..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDK-----LTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEc-----CCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEE
Confidence 456788999999999999864 3568899999874422 2233567889999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
+|||++ ++|.+++.... ...+++..++.++.|++.||+|||+++++|+||+|+||++++++
T Consensus 76 v~e~~~-~~l~~~~~~~~------------------~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~ 136 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSP------------------LTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG 136 (283)
T ss_pred EEeccC-cCHHHHHhhCC------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC
Confidence 999995 68999986211 13589999999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
.++|+|||++....... .......++..|+|||.+.+. .++.++||||||+++|||++|. +||.+.+..+....+.
T Consensus 137 ~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~-~pf~~~~~~~~~~~~~ 213 (283)
T cd07835 137 ALKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRR-PLFPGDSEIDQLFRIF 213 (283)
T ss_pred cEEEeecccccccCCCc--cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHH
Confidence 99999999987542221 111223457789999988765 5789999999999999999965 5776655432221111
Q ss_pred cC----------------------------CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EG----------------------------NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~----------------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+. .........+..+.+++.+||+.+|.+|||+++++++.|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~ 282 (283)
T cd07835 214 RTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282 (283)
T ss_pred HHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCC
Confidence 10 001112456788999999999999999999999998754
No 336
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.1e-34 Score=305.53 Aligned_cols=251 Identities=20% Similarity=0.344 Sum_probs=195.1
Q ss_pred eeccc--CCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEe
Q psy5539 372 DLGQG--AFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFE 448 (653)
Q Consensus 372 ~LG~G--~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~E 448 (653)
.||+| +||+||+|++. .+++.||+|.++... .....+.+.+|+.+++.++||||+++++++..++..++|+|
T Consensus 5 ~ig~g~~~~~~v~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e 79 (328)
T cd08226 5 EIGRGFCNLTSVYLARHT-----PTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISP 79 (328)
T ss_pred HhCCcccCceeEEEEEEc-----CCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEe
Confidence 46666 99999999853 456899999987532 33445688999999999999999999999999999999999
Q ss_pred ecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEE
Q psy5539 449 YMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVK 528 (653)
Q Consensus 449 y~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vk 528 (653)
|+.+|+|.++++... ...+++..+..++.|++.||+|||+.+++||||||+|||++.++.++
T Consensus 80 ~~~~~~l~~~l~~~~------------------~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~ 141 (328)
T cd08226 80 FMAYGSANSLLKTYF------------------PEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVS 141 (328)
T ss_pred cccCCCHHHHHHhhc------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEE
Confidence 999999999987322 13478899999999999999999999999999999999999999999
Q ss_pred EeccCccccccccccc-----cCCCCCCCccccccchhhccC--CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 529 IADFGLSRKMYLQDYY-----KGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 529 I~DfGla~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~--~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
++||+.+......... .......++..|||||.+.+. .++.++||||||+++|||++|. .||.+....+...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~-~p~~~~~~~~~~~ 220 (328)
T cd08226 142 LSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGR-VPFQDMLRTQMLL 220 (328)
T ss_pred EechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCC-CCCCCcChHHHHH
Confidence 9999865433211110 011112345679999998764 4789999999999999999955 5887665444332
Q ss_pred HHHcCCc----------------------------------------------cCCCCCCcHHHHHHHHHhhccCCCCCC
Q psy5539 602 YIKEGNI----------------------------------------------LQAPDNTPDALYDLMKLCWNMKPMNRP 635 (653)
Q Consensus 602 ~i~~~~~----------------------------------------------~~~~~~~~~~l~~li~~cl~~dP~~RP 635 (653)
....+.. ...+...+..+.+|+++||+.||++||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp 300 (328)
T cd08226 221 QKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRP 300 (328)
T ss_pred HHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCC
Confidence 2221110 001123557799999999999999999
Q ss_pred CHHHHHHHHHH
Q psy5539 636 SFRTIYQTLWN 646 (653)
Q Consensus 636 s~~eil~~L~~ 646 (653)
|+.+++++.|-
T Consensus 301 ta~e~l~~~~~ 311 (328)
T cd08226 301 SASSLLSHAFF 311 (328)
T ss_pred CHHHHhhCHHH
Confidence 99999998874
No 337
>KOG0690|consensus
Probab=100.00 E-value=2.5e-35 Score=291.10 Aligned_cols=256 Identities=25% Similarity=0.371 Sum_probs=219.9
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEe
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCA 438 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~ 438 (653)
.+.-++|.+++.||+|.||+|-+++- +.+++.+|+|+++++.- .+...--..|-++|..-+||.+..|--.+.
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rE-----Kat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQ 238 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCRE-----KATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQ 238 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEee-----cccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhc
Confidence 45567899999999999999999984 45789999999987632 222223456889999999999999988889
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
..+.+|+||||+.||.|.-+|.+ ...+++.....+...|+.||.|||+++||.||||.+|
T Consensus 239 t~drlCFVMeyanGGeLf~HLsr--------------------er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLEN 298 (516)
T KOG0690|consen 239 TQDRLCFVMEYANGGELFFHLSR--------------------ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLEN 298 (516)
T ss_pred cCceEEEEEEEccCceEeeehhh--------------------hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhh
Confidence 99999999999999999888752 2457778888899999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
.|+|.+|.+||+||||.+.-.. +........||+.|.|||++..+.|..+.|.|.+||++|||++|.+ ||+..+++.
T Consensus 299 LlLDkDGHIKitDFGLCKE~I~--~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRL-PFyn~dh~k 375 (516)
T KOG0690|consen 299 LLLDKDGHIKITDFGLCKEEIK--YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRL-PFYNKDHEK 375 (516)
T ss_pred heeccCCceEeeecccchhccc--ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccC-cccccchhH
Confidence 9999999999999999975422 1233455789999999999999999999999999999999999665 999999999
Q ss_pred HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW 645 (653)
Q Consensus 599 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~ 645 (653)
+++.|.... +.+|..++++.+.|+...+.+||.+|. .+.||.++-+
T Consensus 376 LFeLIl~ed-~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~F 426 (516)
T KOG0690|consen 376 LFELILMED-LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRF 426 (516)
T ss_pred HHHHHHhhh-ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhh
Confidence 999998876 478899999999999999999999997 5677777654
No 338
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.4e-34 Score=296.55 Aligned_cols=244 Identities=20% Similarity=0.279 Sum_probs=193.4
Q ss_pred eecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH--HHHHHHHHHH---HHHhhCCCCccceEEeEEecCCceEEE
Q psy5539 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE--YLQTDFEREA---CLLAEFDHPNIVKLLGVCAVGKPMCLL 446 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~--~~~~~f~~Ei---~il~~l~HpnIv~l~g~~~~~~~~~LV 446 (653)
.||+|+||.||+|+.. .+++.||+|.+...... .....+..|. .+++...||||+++++++...+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEe-----cCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEE
Confidence 3799999999999863 35678999988643211 1112233333 445556899999999999999999999
Q ss_pred EeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCc
Q psy5539 447 FEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV 526 (653)
Q Consensus 447 ~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~ 526 (653)
|||+++|+|.+++. ....+++..+..++.|++.||.|||+.+++||||||+||++++++.
T Consensus 76 ~e~~~g~~L~~~l~--------------------~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~ 135 (278)
T cd05606 76 LDLMNGGDLHYHLS--------------------QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGH 135 (278)
T ss_pred EecCCCCcHHHHHH--------------------hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCC
Confidence 99999999999885 1245899999999999999999999999999999999999999999
Q ss_pred EEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCC---CHHHHHHH
Q psy5539 527 VKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGL---THEEVVKY 602 (653)
Q Consensus 527 vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~---~~~e~~~~ 602 (653)
+||+|||++...... ......++..|+|||.+..+ .++.++||||+|+++|||++|. .||.+. ...+....
T Consensus 136 ~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~-~p~~~~~~~~~~~~~~~ 210 (278)
T cd05606 136 VRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH-SPFRQHKTKDKHEIDRM 210 (278)
T ss_pred EEEccCcCccccCcc----CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCC-CCCCCCCccchHHHHHH
Confidence 999999998754322 12234578899999998755 6899999999999999999955 477655 33333332
Q ss_pred HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHHH
Q psy5539 603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLWN 646 (653)
Q Consensus 603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~~ 646 (653)
+ .......+...+.++.+++.+|+..+|.+|| ++.+++++.|-
T Consensus 211 ~-~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~ 258 (278)
T cd05606 211 T-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFF 258 (278)
T ss_pred h-hccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccc
Confidence 2 2223455667789999999999999999999 99999988753
No 339
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.1e-34 Score=302.90 Aligned_cols=260 Identities=24% Similarity=0.367 Sum_probs=198.0
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC--C
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--K 441 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--~ 441 (653)
.|.+.+.||+|+||.||+|+... ...+..||+|.++... .......+.+|+.++++++||||+++++++... .
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~---~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKN---GKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecC---CCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCc
Confidence 36788899999999999999642 1256899999997632 122334678899999999999999999999887 7
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+++ +|.+++..... .....+++..++.++.||+.||+|||+.+|+||||||+|||+
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~~---------------~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~ 141 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFHRQ---------------AKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILV 141 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhhcc---------------CCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEE
Confidence 89999999975 78777753221 112468899999999999999999999999999999999999
Q ss_pred cC----CCcEEEeccCcccccccccc-ccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 522 ND----QMVVKIADFGLSRKMYLQDY-YKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 522 ~~----~~~vkI~DfGla~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
+. ++.+||+|||++........ ........++..|+|||.+.+. .++.++||||||++++||++| .+||.+..
T Consensus 142 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~-~~~~~~~~ 220 (316)
T cd07842 142 MGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTL-EPIFKGRE 220 (316)
T ss_pred cCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhc-CCCCcCCc
Confidence 99 99999999999976532221 1122234567889999988764 589999999999999999995 45776543
Q ss_pred HHH-------------HHHHH---------------------HcCCccCCC-----------CCCcHHHHHHHHHhhccC
Q psy5539 596 HEE-------------VVKYI---------------------KEGNILQAP-----------DNTPDALYDLMKLCWNMK 630 (653)
Q Consensus 596 ~~e-------------~~~~i---------------------~~~~~~~~~-----------~~~~~~l~~li~~cl~~d 630 (653)
... ++..+ ........+ ...+.++.+++.+||+.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 300 (316)
T cd07842 221 AKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYD 300 (316)
T ss_pred ccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCC
Confidence 221 11100 000001111 145678999999999999
Q ss_pred CCCCCCHHHHHHHHH
Q psy5539 631 PMNRPSFRTIYQTLW 645 (653)
Q Consensus 631 P~~RPs~~eil~~L~ 645 (653)
|++|||+.+++++.|
T Consensus 301 P~~Rps~~eil~~~~ 315 (316)
T cd07842 301 PTKRITAEEALEHPY 315 (316)
T ss_pred cccCcCHHHHhcCCC
Confidence 999999999998754
No 340
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.9e-34 Score=307.08 Aligned_cols=253 Identities=23% Similarity=0.340 Sum_probs=198.9
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC---
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--- 440 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--- 440 (653)
++|.+.+.||+|+||+||+|+.. .++..||||.++... .......+.+|+.+++.++|+||+++++++...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~ 79 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNS-----ETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHRE 79 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEec-----CCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccc
Confidence 46889999999999999999853 456899999987532 222334677899999999999999999987543
Q ss_pred --CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 441 --KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 441 --~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
...++|+||+. ++|.+++. ....+++..+..++.|++.||.|||+++++||||||+|
T Consensus 80 ~~~~~~lv~e~~~-~~L~~~~~--------------------~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~N 138 (337)
T cd07858 80 AFNDVYIVYELMD-TDLHQIIR--------------------SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSN 138 (337)
T ss_pred ccCcEEEEEeCCC-CCHHHHHh--------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH
Confidence 35799999996 68988885 22458899999999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
|+++.++.+||+|||++....... .......++..|+|||.+.. ..++.++||||||+++|+|++| .+||.+.+..
T Consensus 139 il~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~ 215 (337)
T cd07858 139 LLLNANCDLKICDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGR-KPLFPGKDYV 215 (337)
T ss_pred EEEcCCCCEEECcCccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcC-CCCCCCCChH
Confidence 999999999999999997653221 11123346778999998875 4689999999999999999985 5688765543
Q ss_pred HHHHHHHc------------------------C------CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 598 EVVKYIKE------------------------G------NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 598 e~~~~i~~------------------------~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+....+.. . ......+.++.++.+++++||+.+|++|||+++++++.|-
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~ 294 (337)
T cd07858 216 HQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL 294 (337)
T ss_pred HHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcch
Confidence 32221110 0 0001123577889999999999999999999999999653
No 341
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=4.1e-34 Score=297.11 Aligned_cols=254 Identities=21% Similarity=0.312 Sum_probs=201.9
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc---cHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCC
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA---SEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGK 441 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~---~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~ 441 (653)
+|++.+.||+|+||.||+++..+ ...++..||||.++... .....+.+.+|+.++.++ +||||+++++.+..+.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~--~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~ 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVG--GHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEec--cccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC
Confidence 36788999999999999998643 23456789999987432 123345688999999999 5999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++||||+++|+|.+++.. ...+++..+..++.|+++||.|||+.+++|+||+|+||++
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~--------------------~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~ 138 (288)
T cd05583 79 KLHLILDYVNGGELFTHLYQ--------------------REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL 138 (288)
T ss_pred EEEEEEecCCCCcHHHHHhh--------------------cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE
Confidence 99999999999999999851 2347888999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCC--CCCchhHHHHHHHHHHHHhCCCCCCCCC----C
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK--YTVESDVWAFGVCLWEIFSFALQPYYGL----T 595 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~t~ksDVwSlGvvl~ellt~~~~p~~~~----~ 595 (653)
++++.++|+|||+++....... .......++..|+|||.+.+.. .+.++||||||+++|||++|. .||... .
T Consensus 139 ~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~-~p~~~~~~~~~ 216 (288)
T cd05583 139 DSEGHVVLTDFGLSKEFLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGA-SPFTVDGEQNS 216 (288)
T ss_pred CCCCCEEEEECccccccccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCC-CCcccCcccch
Confidence 9999999999999876533221 1112234678899999987765 789999999999999999955 466432 2
Q ss_pred HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHH---HHHH
Q psy5539 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI---YQTL 644 (653)
Q Consensus 596 ~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei---l~~L 644 (653)
..++.+.+.... ...+..++..+.+++.+||+.+|++|||+.++ ++++
T Consensus 217 ~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 217 QSEISRRILKSK-PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred HHHHHHHHHccC-CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 334444443332 34566688999999999999999999996554 5554
No 342
>KOG0586|consensus
Probab=100.00 E-value=4.7e-35 Score=312.67 Aligned_cols=254 Identities=26% Similarity=0.395 Sum_probs=219.0
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
....|.+...||+|.|++|.+|+.. .++..||||.+.+... ....+.+.+|+++|..|+|||||+++.+.....
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~-----~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~ 128 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHI-----LTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA 128 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEec-----CCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc
Confidence 3457889999999999999999964 3568899999976543 233445889999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
.+++||||+.+|.+.+||..+ +.+.+..+..++.|+.++++|||++.|+|||||++||||
T Consensus 129 ~lylV~eya~~ge~~~yl~~~--------------------gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL 188 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKH--------------------GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL 188 (596)
T ss_pred eeEEEEEeccCchhHHHHHhc--------------------ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc
Confidence 999999999999999999733 345567888999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKY-TVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV 600 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~ 600 (653)
+.++++||+|||++..+.... ......|++.|.|||.+.+..| .++.|+||+|++||-|++|.+ ||.+.+..++.
T Consensus 189 ~~~mnikIaDfgfS~~~~~~~---~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsL-PFDG~~lk~Lr 264 (596)
T KOG0586|consen 189 DENMNIKIADFGFSTFFDYGL---MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSL-PFDGQNLKELR 264 (596)
T ss_pred ccccceeeeccccceeecccc---cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeeccc-ccCCccccccc
Confidence 999999999999998764222 2345678889999999998877 489999999999999999655 99999988888
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+.+..+.+ ..|...+.+..+++++++-.+|.+|+++++|.++-|.
T Consensus 265 ~rvl~gk~-rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 265 PRVLRGKY-RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred chheeeee-cccceeechhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 87777764 4566677889999999999999999999999988763
No 343
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=6.8e-34 Score=299.61 Aligned_cols=247 Identities=23% Similarity=0.427 Sum_probs=200.0
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
|...+.||+|+||+||+|+.. .++..|++|.+.... .......+.+|+++++.++|||++++++++..+...+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~-----~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNS-----HTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEEC-----CCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence 455677999999999999863 356789999986432 2334456889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+. |+|.+++.. ....+++.+++.++.||+.||.|||+.+++|+||+|+||+++++
T Consensus 98 lv~e~~~-~~l~~~l~~-------------------~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~ 157 (313)
T cd06633 98 LVMEYCL-GSASDLLEV-------------------HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP 157 (313)
T ss_pred EEEecCC-CCHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCC
Confidence 9999996 588887752 12457899999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL---YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
+.+||+|||++.... ......++..|+|||.+. ...++.++||||||+++|||++|. .|+.+.+......
T Consensus 158 ~~~kL~dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~-~p~~~~~~~~~~~ 230 (313)
T cd06633 158 GQVKLADFGSASKSS------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK-PPLFNMNAMSALY 230 (313)
T ss_pred CCEEEeecCCCcccC------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCChHHHHH
Confidence 999999999986431 122345678899999974 456889999999999999999965 4777666555444
Q ss_pred HHHcCCccC-CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 602 YIKEGNILQ-APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 602 ~i~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+....... ....++..+.+++.+||+.+|.+||++.+++++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~ 275 (313)
T cd06633 231 HIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDF 275 (313)
T ss_pred HHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 444433222 23456788999999999999999999999998754
No 344
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.6e-34 Score=297.02 Aligned_cols=255 Identities=20% Similarity=0.304 Sum_probs=203.9
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc---HHHHHHHHHHHHHHhhC-CCCccceEEeEEecCC
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS---EYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGK 441 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~---~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~ 441 (653)
+|++.+.||+|+||.||+|+... ...++..||+|+++.... ....+.+.+|+.++.++ +|+||+++++.+..+.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~--~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVS--GHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEecc--CCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC
Confidence 36788999999999999998643 224568899999875321 22345678999999999 5999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
..++|+||+++++|.+++.. ...+++..+..++.|++.||.|||+.+++||||+|+|||+
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~ 138 (290)
T cd05613 79 KLHLILDYINGGELFTHLSQ--------------------RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL 138 (290)
T ss_pred eEEEEEecCCCCcHHHHHHH--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE
Confidence 99999999999999999862 2347788999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC--CCCCchhHHHHHHHHHHHHhCCCCCCCCC----C
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFSFALQPYYGL----T 595 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~t~ksDVwSlGvvl~ellt~~~~p~~~~----~ 595 (653)
++++.+||+|||+++....... .......++..|+|||.+... .++.++||||||+++|+|++|. .||... .
T Consensus 139 ~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~-~p~~~~~~~~~ 216 (290)
T cd05613 139 DSNGHVVLTDFGLSKEFHEDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGA-SPFTVDGEKNS 216 (290)
T ss_pred CCCCCEEEeeCccceecccccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCC-CCCCcCCcccc
Confidence 9999999999999976432221 112234467889999998753 4688999999999999999955 477532 2
Q ss_pred HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539 596 HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW 645 (653)
Q Consensus 596 ~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~ 645 (653)
..++.+.+.... ...+...+..+.+++++||+.+|.+|| ++++++.+.+
T Consensus 217 ~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~ 270 (290)
T cd05613 217 QAEISRRILKSE-PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPF 270 (290)
T ss_pred HHHHHHHhhccC-CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcc
Confidence 344444443332 345667889999999999999999997 8889888754
No 345
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.8e-34 Score=295.52 Aligned_cols=240 Identities=23% Similarity=0.332 Sum_probs=190.7
Q ss_pred CeeEEee--ecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCc
Q psy5539 366 DIIYVRD--LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 366 ~~~~~~~--LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~ 442 (653)
++.+.+. ||+|+||.||+++.. .++..+|+|.++...... . |+.....+ +|+||+++++.+...+.
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~-----~~~~~~~~k~~~~~~~~~----~--e~~~~~~~~~h~~iv~~~~~~~~~~~ 83 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHK-----PTQKLFVQKIIKAKNFNA----I--EPMVHQLMKDNPNFIKLYYSVTTLKG 83 (267)
T ss_pred hhccccceeecCCCceEEEEEEEc-----CCCcEEEEEEEehhhcch----h--hHHHHHHhhcCCCEEEEEEEEecCCe
Confidence 4445554 599999999999864 356789999986532111 1 22222212 79999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++||||+++|+|.++++. ...+++.++..++.|+++||.|||+.+++||||||+||+++
T Consensus 84 ~~iv~e~~~~~~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~ 143 (267)
T PHA03390 84 HVLIMDYIKDGDLFDLLKK--------------------EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD 143 (267)
T ss_pred eEEEEEcCCCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe
Confidence 9999999999999999962 13689999999999999999999999999999999999999
Q ss_pred CCC-cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH---
Q psy5539 523 DQM-VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE--- 598 (653)
Q Consensus 523 ~~~-~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e--- 598 (653)
.++ .++|+|||+++.... .....++..|+|||.+.+..++.++||||||+++|||++|. .||.....++
T Consensus 144 ~~~~~~~l~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~-~p~~~~~~~~~~~ 216 (267)
T PHA03390 144 RAKDRIYLCDYGLCKIIGT------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGK-HPFKEDEDEELDL 216 (267)
T ss_pred CCCCeEEEecCccceecCC------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCC-CCCCCCCcchhhH
Confidence 998 999999999875421 12335678999999999999999999999999999999965 5776554332
Q ss_pred --HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC-HHHHHHHHH
Q psy5539 599 --VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS-FRTIYQTLW 645 (653)
Q Consensus 599 --~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~eil~~L~ 645 (653)
+.... ......+...+..+.+++.+||+.+|.+||+ ++++++|.|
T Consensus 217 ~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~ 264 (267)
T PHA03390 217 ESLLKRQ--QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPF 264 (267)
T ss_pred HHHHHhh--cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCc
Confidence 22222 2223445578899999999999999999995 699998876
No 346
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.3e-34 Score=290.54 Aligned_cols=244 Identities=25% Similarity=0.365 Sum_probs=206.7
Q ss_pred ecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeec
Q psy5539 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 373 LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
||+|+||.||++... .++..+|+|.++.... ......+.+|+.++++++|+||+++++.+..+...++||||+
T Consensus 1 lg~G~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKK-----DTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEEC-----CCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecC
Confidence 699999999999864 2467899999875432 234567899999999999999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
++++|.+++.. ...+++..+..++.|++.||.|||+.+++|+||+|+||++++++.++|+
T Consensus 76 ~~~~L~~~l~~--------------------~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~ 135 (250)
T cd05123 76 PGGELFSHLSK--------------------EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLT 135 (250)
T ss_pred CCCcHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEe
Confidence 99999999862 2357899999999999999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccC
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQ 610 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~ 610 (653)
|||++....... .......++..|++||.+.+...+.++|+||||+++||+++| ..||...+..+....+.... ..
T Consensus 136 d~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g-~~p~~~~~~~~~~~~~~~~~-~~ 211 (250)
T cd05123 136 DFGLAKELSSEG--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTG-KPPFYAEDRKEIYEKILKDP-LR 211 (250)
T ss_pred ecCcceecccCC--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHC-CCCCCCCCHHHHHHHHhcCC-CC
Confidence 999987653322 122344567789999999988899999999999999999994 56887777777777776643 56
Q ss_pred CCCCCcHHHHHHHHHhhccCCCCCCCH---HHHHHHHH
Q psy5539 611 APDNTPDALYDLMKLCWNMKPMNRPSF---RTIYQTLW 645 (653)
Q Consensus 611 ~~~~~~~~l~~li~~cl~~dP~~RPs~---~eil~~L~ 645 (653)
.+...+..+.+++++||..+|++||++ ++++++.|
T Consensus 212 ~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~ 249 (250)
T cd05123 212 FPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249 (250)
T ss_pred CCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCC
Confidence 677789999999999999999999999 77776653
No 347
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.4e-34 Score=297.08 Aligned_cols=251 Identities=25% Similarity=0.360 Sum_probs=202.0
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH-HHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~-~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
|.+.+.||+|++|.||+|... .++..+++|.++..... .....+.+|+.++++++|+||+++++++..+...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDK-----LTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcC-----CCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEE
Confidence 356678999999999999853 35688999998754322 345678899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
|+||+++ +|.+++.. ....+++..+..++.||+.||.|||+.+|+|+||+|+||++++++
T Consensus 76 v~e~~~~-~l~~~l~~-------------------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~ 135 (283)
T cd05118 76 VFEFMDT-DLYKLIKD-------------------RQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG 135 (283)
T ss_pred EEeccCC-CHHHHHHh-------------------hcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC
Confidence 9999975 89888862 124688999999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
.++|+|||.+....... .......++..|+|||.+.+. .++.++||||||+++|+|++| ..||.+.+..+....+.
T Consensus 136 ~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg-~~~~~~~~~~~~~~~~~ 212 (283)
T cd05118 136 VLKLADFGLARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSR-RPLFPGKSEIDQLFKIF 212 (283)
T ss_pred cEEEeeeeeeEecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHH
Confidence 99999999987654332 112234566789999998876 789999999999999999996 46887766554433332
Q ss_pred cCCc-----------------------------cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EGNI-----------------------------LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~~~-----------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.... ....+..+.++.+++.+||+.+|.+||++++++.+.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~ 282 (283)
T cd05118 213 RTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282 (283)
T ss_pred HHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCC
Confidence 1100 0011236788999999999999999999999998764
No 348
>KOG0986|consensus
Probab=100.00 E-value=2.6e-35 Score=302.64 Aligned_cols=257 Identities=23% Similarity=0.298 Sum_probs=214.1
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEE
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVC 437 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~ 437 (653)
..+..+.|..-+.||+|+||.||-++.+ .+|+++|.|.+....- .....-...|-.+|.+++.+.||.+--.+
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvr-----aTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf 254 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVR-----ATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF 254 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEe-----cchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee
Confidence 3455677888999999999999998854 5778999988754321 22334567899999999999999998889
Q ss_pred ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
+..+.++||+..|+||||.-+|-. ...+.+++..++.++.+|+.||++||+++||.|||||+
T Consensus 255 eTkd~LClVLtlMNGGDLkfHiyn------------------~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPe 316 (591)
T KOG0986|consen 255 ETKDALCLVLTLMNGGDLKFHIYN------------------HGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPE 316 (591)
T ss_pred cCCCceEEEEEeecCCceeEEeec------------------cCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChh
Confidence 999999999999999999877642 23467999999999999999999999999999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC---
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL--- 594 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~--- 594 (653)
|||+|+.|+++|+|+|||..+.... ......||++|||||++..+.|+...|.|||||+||||+. |..||...
T Consensus 317 NILLDd~GhvRISDLGLAvei~~g~---~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~-G~sPFr~~KeK 392 (591)
T KOG0986|consen 317 NILLDDHGHVRISDLGLAVEIPEGK---PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIA-GHSPFRQRKEK 392 (591)
T ss_pred heeeccCCCeEeeccceEEecCCCC---ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHc-ccCchhhhhhh
Confidence 9999999999999999998764332 3345689999999999999999999999999999999998 55588653
Q ss_pred -CHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHH
Q psy5539 595 -THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTL 644 (653)
Q Consensus 595 -~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L 644 (653)
..+|+-+++.+.. ...++..+++.++|.+..|++||++|. +++++.+|+
T Consensus 393 vk~eEvdrr~~~~~-~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~Hp 447 (591)
T KOG0986|consen 393 VKREEVDRRTLEDP-EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHP 447 (591)
T ss_pred hhHHHHHHHHhcch-hhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCc
Confidence 3446666655543 456788999999999999999999998 455777665
No 349
>KOG0596|consensus
Probab=100.00 E-value=5.7e-35 Score=306.65 Aligned_cols=260 Identities=21% Similarity=0.304 Sum_probs=208.4
Q ss_pred ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccc-cccHHHHHHHHHHHHHHhhCC-CCccceEEeE
Q psy5539 359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFD-HPNIVKLLGV 436 (653)
Q Consensus 359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~-~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~ 436 (653)
.+.+....|++++.||+||.++||++.- .+...+|+|++.. .+......-|..|+.+|.+|+ |.+||.|++|
T Consensus 355 ~i~Vkg~~Yeilk~iG~GGSSkV~kV~~------s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DY 428 (677)
T KOG0596|consen 355 IIKVKGREYEILKQIGSGGSSKVFKVLN------SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDY 428 (677)
T ss_pred eEEECcchhhHHHhhcCCCcceeeeeec------CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeee
Confidence 3455566788899999999999999974 3446777777653 455666778999999999995 8999999999
Q ss_pred EecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 437 CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 437 ~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
-..++.+||||||= ..||..+|++.. ..++...+..+..|++.++.++|++||||-||||
T Consensus 429 Ev~d~~lYmvmE~G-d~DL~kiL~k~~-------------------~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKP 488 (677)
T KOG0596|consen 429 EVTDGYLYMVMECG-DIDLNKILKKKK-------------------SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKP 488 (677)
T ss_pred eccCceEEEEeecc-cccHHHHHHhcc-------------------CCCchHHHHHHHHHHHHHHHHHHHhceeecCCCc
Confidence 99999999999985 569999998432 2223237788999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCC-----------CCCchhHHHHHHHHHHHHh
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK-----------YTVESDVWAFGVCLWEIFS 585 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-----------~t~ksDVwSlGvvl~ellt 585 (653)
.|+|+-. |.+||+|||+|..+.............||+.||+||.+.... .+.+|||||||||||+|+.
T Consensus 489 ANFLlVk-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvY 567 (677)
T KOG0596|consen 489 ANFLLVK-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVY 567 (677)
T ss_pred ccEEEEe-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHh
Confidence 9999976 489999999999887666666667789999999999987543 5588999999999999996
Q ss_pred CCCCCCCCCC-HHHHHHHHHcCCc-cCCCCCCc-HHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 586 FALQPYYGLT-HEEVVKYIKEGNI-LQAPDNTP-DALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 586 ~~~~p~~~~~-~~e~~~~i~~~~~-~~~~~~~~-~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+.+||.... ...-+..|.+... .++|+.-+ .++.++|+.||.+||.+|||+.+++++.+-
T Consensus 568 -gktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl 630 (677)
T KOG0596|consen 568 -GKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFL 630 (677)
T ss_pred -cCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccc
Confidence 667887654 3334455555422 23444333 349999999999999999999999998753
No 350
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.2e-34 Score=304.89 Aligned_cols=256 Identities=21% Similarity=0.301 Sum_probs=200.7
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEec----
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAV---- 439 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~---- 439 (653)
++|++.+.||+|+||.||+|... .++..||+|+++.... ......+.+|+.++++++||||+++++++..
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~-----~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 79 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDT-----RSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGAD 79 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEc-----CCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCC
Confidence 57888999999999999999864 3567899999875422 2334567889999999999999999988753
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
....++||||+. |+|.+++. ....+++..+..++.||+.||.|||+++|+||||||+||
T Consensus 80 ~~~~~lv~e~~~-~~l~~~~~--------------------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Ni 138 (334)
T cd07855 80 FKDVYVVMDLME-SDLHHIIH--------------------SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNL 138 (334)
T ss_pred CceEEEEEehhh-hhHHHHhc--------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHE
Confidence 346899999996 68988875 123488999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCcccccccccccc--CCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
++++++.+||+|||++.......... ......++..|+|||.+.. ..++.++||||||+++|||++ +.+||.+.+.
T Consensus 139 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~-g~~pf~~~~~ 217 (334)
T cd07855 139 LVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLG-RRQLFPGKNY 217 (334)
T ss_pred EEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHc-CCCccCCCCh
Confidence 99999999999999987653222111 1123456788999998865 468999999999999999998 4568876654
Q ss_pred HHHHHHHHc-------------------------CCccCC-----CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 597 EEVVKYIKE-------------------------GNILQA-----PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 597 ~e~~~~i~~-------------------------~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.+.+..+.. ...... ....+.++.+++++||+.+|.+||++++++.++|.
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~ 297 (334)
T cd07855 218 VHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFL 297 (334)
T ss_pred HHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhh
Confidence 332222111 000001 13467899999999999999999999999999875
Q ss_pred H
Q psy5539 647 I 647 (653)
Q Consensus 647 l 647 (653)
-
T Consensus 298 ~ 298 (334)
T cd07855 298 A 298 (334)
T ss_pred h
Confidence 4
No 351
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.3e-34 Score=296.47 Aligned_cols=251 Identities=28% Similarity=0.423 Sum_probs=197.7
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeEEecCCceEE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~~~~L 445 (653)
|++.+.||+|+||.||+|+... .+..|+||++.............+|+..+++++ |+||+++++++..++..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~-----~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKE-----TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECC-----CCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEE
Confidence 4677889999999999998642 457899999876543223334567999999999 9999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
||||+ +|+|.+++... ....+++..++.++.|++.+|.|||+.+++|+||+|+||++++++
T Consensus 76 v~e~~-~~~l~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~ 136 (283)
T cd07830 76 VFEYM-EGNLYQLMKDR------------------KGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE 136 (283)
T ss_pred EEecC-CCCHHHHHHhc------------------ccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC
Confidence 99999 88999988622 124579999999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
.++|+|||++........ .....++..|+|||.+.. ..++.++||||||+++|||++|. +||......+....+.
T Consensus 137 ~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~-~~~~~~~~~~~~~~~~ 212 (283)
T cd07830 137 VVKIADFGLAREIRSRPP---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLR-PLFPGSSEIDQLYKIC 212 (283)
T ss_pred CEEEeecccceeccCCCC---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCC-CccCCCChHHHHHHHH
Confidence 999999999976532211 123446778999998754 45799999999999999999964 6776655443332221
Q ss_pred cC-C----------------------------ccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EG-N----------------------------ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~-~----------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.. . ........+.++.+++++||+.+|++||++++++.+.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~ 282 (283)
T cd07830 213 SVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282 (283)
T ss_pred HhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence 10 0 00001123678999999999999999999999998754
No 352
>cd07467 CRD_TK_ROR1 Cysteine-rich domain of tyrosine kinase-like orphan receptor 1. The cysteine-rich domain (CRD) is an essential part of the tyrosine kinase-like orphan receptor 1 (Ror1), a conserved family of tyrosine kinases that function in various processes, including neuronal and skeletal development, cell polarity, and cell movement. Ror proteins are receptors of Wnt proteins, which are key players in a number of fundamental cellular processes in embryogenesis and postnatal development. In different cellular contexts, Ror proteins can either activate or repress transcription of Wnt target genes, and can modulate Wnt signaling by sequestering Wnt ligands. In addition, a number of Wnt-independent functions have been proposed for both Ror1 and Ror2.
Probab=100.00 E-value=1.4e-35 Score=263.55 Aligned_cols=138 Identities=25% Similarity=0.592 Sum_probs=118.6
Q ss_pred CCCccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHHH-HHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCC
Q psy5539 31 PQGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMAL-WKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIP 109 (653)
Q Consensus 31 ~~g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~~-~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~ 109 (653)
.+|||++|||+||++||.+ ..|||++. .++ +++++++++++ |-+.+++||+.||+||+++||||+||.|++++..|
T Consensus 1 ~~GyC~~YrG~vC~~~L~~-~~Vf~~~~-~~~-~~~E~~l~aa~~~i~~s~~vs~~Cr~~A~~~LC~~~FP~C~~~~~~P 77 (142)
T cd07467 1 EDGFCQPYRGIACARFIGN-RTIYMESL-HMQ-GEIENQITAAFTMIGTSSHLSDKCSQFAIPSLCHYAFPYCDETSGMP 77 (142)
T ss_pred CCCccccccchHHHHHhCC-CeEEEeCC-CCH-HHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHhCCCCcccCCCC
Confidence 4799999999999999984 57999844 444 46777777553 44446899999999999999999999999999999
Q ss_pred CCCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCCCCCCCCCCcccCCCCcCCCCCCCCc
Q psy5539 110 MSLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELPNCDTLPKYEVVNGKPTCSHAQLTEM 178 (653)
Q Consensus 110 ~~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp~C~~lp~~~~~~~~~~C~~~~~~~~ 178 (653)
+|+|+||++|+++++++|++||+++++++..+ .++.||+|+.||..+ +...+.|++++++..
T Consensus 78 ~pr~iCreeC~~le~~~C~~Ey~~a~~~~~i~------~~~~LP~C~~LP~~~-~~~~~~C~~igi~~~ 139 (142)
T cd07467 78 KPRDLCRDECEILENVLCQTEYIFARSNPMIL------MRLKLPNCEDLAQPD-SPEAANCIRIGIPMA 139 (142)
T ss_pred CcchHHHHHHHHHHHHHhHHHHHHHHhCcccc------cccCCCChhhcCCCC-CCCCCCceeeCCCCC
Confidence 99999999999999999999999999997543 467899999999887 377899999998754
No 353
>KOG1035|consensus
Probab=100.00 E-value=5.3e-35 Score=330.40 Aligned_cols=249 Identities=24% Similarity=0.409 Sum_probs=190.8
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
++|+.++.||+||||.|||++. .-+|+.+|||++.-..+......+.+|+..+++|+|||||+++..|.+.....
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRN-----KlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~ 553 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRN-----KLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAEL 553 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEee-----cccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcc
Confidence 4677788899999999999985 35789999999987766666677899999999999999999998764322111
Q ss_pred --------------------------------------------------------------------------------
Q psy5539 445 -------------------------------------------------------------------------------- 444 (653)
Q Consensus 445 -------------------------------------------------------------------------------- 444 (653)
T Consensus 554 ~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~t 633 (1351)
T KOG1035|consen 554 TVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNT 633 (1351)
T ss_pred ccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccc
Confidence
Q ss_pred ---------------------------------------EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCC
Q psy5539 445 ---------------------------------------LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQL 485 (653)
Q Consensus 445 ---------------------------------------LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l 485 (653)
|-||||+...|.++++ ...+
T Consensus 634 S~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~---------------------~N~~ 692 (1351)
T KOG1035|consen 634 SDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIR---------------------RNHF 692 (1351)
T ss_pred cccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHH---------------------hccc
Confidence 1122222211111111 1112
Q ss_pred --CHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCcccccc----cc------------ccccCC
Q psy5539 486 --STCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMY----LQ------------DYYKGD 547 (653)
Q Consensus 486 --~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~----~~------------~~~~~~ 547 (653)
.....++++++|+.||+|+|++|||||||||.||+++++..|||+|||+|.... .. ......
T Consensus 693 ~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~ 772 (1351)
T KOG1035|consen 693 NSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDL 772 (1351)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccc
Confidence 356779999999999999999999999999999999999999999999998731 00 001123
Q ss_pred CCCCCccccccchhhccC---CCCCchhHHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHcCCccCC---CCCCcHHHH
Q psy5539 548 ENDAIPVRWMPLESILYN---KYTVESDVWAFGVCLWEIFSFALQPYY-GLTHEEVVKYIKEGNILQA---PDNTPDALY 620 (653)
Q Consensus 548 ~~~~~t~~y~aPE~~~~~---~~t~ksDVwSlGvvl~ellt~~~~p~~-~~~~~e~~~~i~~~~~~~~---~~~~~~~l~ 620 (653)
+...||.-|+|||.+.+. .|+.|+|+|||||||+||+. ||. .+....++..++++.++.. ...--+.-.
T Consensus 773 Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y----PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~ 848 (1351)
T KOG1035|consen 773 TSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY----PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEA 848 (1351)
T ss_pred ccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc----cCCchHHHHHHHHhcccCCCCCCcccccccchHHH
Confidence 456789999999998765 49999999999999999995 653 4556677888888887655 333445678
Q ss_pred HHHHHhhccCCCCCCCHHHHHHH
Q psy5539 621 DLMKLCWNMKPMNRPSFRTIYQT 643 (653)
Q Consensus 621 ~li~~cl~~dP~~RPs~~eil~~ 643 (653)
++|+.++++||++|||+.|+++.
T Consensus 849 slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 849 SLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred HHHHHHhcCCCccCCCHHHHhhc
Confidence 99999999999999999999864
No 354
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1e-33 Score=293.01 Aligned_cols=251 Identities=28% Similarity=0.439 Sum_probs=198.7
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhC---CCCccceEEeEEecCCc
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEF---DHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l---~HpnIv~l~g~~~~~~~ 442 (653)
|++.+.||+|+||.||+|+.. .+++.+|+|+++.... ......+.+|+.++.++ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 75 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDL-----NTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT 75 (287)
T ss_pred CeEEEEecccCceEEEEEEEC-----CCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC
Confidence 467889999999999999964 2467899999974322 22234566787777665 69999999999987776
Q ss_pred -----eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 443 -----MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 443 -----~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
.+++|||+++ +|.+++.... ...+++..++.++.|++.||.|||+.+++|+||+|+
T Consensus 76 ~~~~~~~l~~e~~~~-~l~~~l~~~~------------------~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~ 136 (287)
T cd07838 76 DRELKLTLVFEHVDQ-DLATYLSKCP------------------KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQ 136 (287)
T ss_pred CCCceeEEEehhccc-CHHHHHHHcc------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChh
Confidence 9999999974 8999886221 135789999999999999999999999999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
||++++++.+||+|||++....... ......++..|+|||.+.+..++.++||||||+++|||++| .+||.+.+..
T Consensus 137 nili~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~-~~~~~~~~~~ 212 (287)
T cd07838 137 NILVTSDGQVKIADFGLARIYSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRR-RPLFRGTSEA 212 (287)
T ss_pred hEEEccCCCEEEeccCcceeccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhC-CCcccCCChH
Confidence 9999999999999999987653221 11223467889999999999999999999999999999995 6788887766
Q ss_pred HHHHHHHcCCcc------------------C--------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 598 EVVKYIKEGNIL------------------Q--------APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 598 e~~~~i~~~~~~------------------~--------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+....+.+.... . .....+..+.+++.+||+.+|.+||++.+++++.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~ 286 (287)
T cd07838 213 DQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286 (287)
T ss_pred HHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcC
Confidence 655544321000 0 00124567889999999999999999999998754
No 355
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4e-34 Score=304.44 Aligned_cols=255 Identities=28% Similarity=0.364 Sum_probs=198.9
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhC-CCCccceEEeEEec--
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAV-- 439 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~-- 439 (653)
.++|.+.+.||+|+||.||+|.+. .++..+|+|++... ........+.+|+.+++++ +|+||+++++++..
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~ 80 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDR-----RTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN 80 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEc-----CCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC
Confidence 356788899999999999999863 34678999988542 2223345677899999999 99999999999864
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
+...++||||++ ++|.+++.. ..+++..+..++.||+.||+|||+.+|+||||||+||
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~~---------------------~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~ni 138 (337)
T cd07852 81 DKDIYLVFEYME-TDLHAVIRA---------------------NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNI 138 (337)
T ss_pred CceEEEEecccc-cCHHHHHhc---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHE
Confidence 346899999997 599988851 1567888999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccc---cCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYY---KGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
++++++.+||+|||++......... .......++..|+|||.+.. ..++.++||||||+++|||++|. .||.+..
T Consensus 139 ll~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~-~pf~~~~ 217 (337)
T cd07852 139 LLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGK-PLFPGTS 217 (337)
T ss_pred EEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCC-CCCCCCC
Confidence 9999999999999999866433221 11122346788999998765 46789999999999999999964 5787655
Q ss_pred HHHHHHHHHcCC---------------------------c---cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 596 HEEVVKYIKEGN---------------------------I---LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 596 ~~e~~~~i~~~~---------------------------~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..+....+.... . .......+.++.+++.+||+.+|++|||+.+++++.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~ 297 (337)
T cd07852 218 TLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPY 297 (337)
T ss_pred hHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChh
Confidence 443333221110 0 0111236789999999999999999999999999865
Q ss_pred H
Q psy5539 646 N 646 (653)
Q Consensus 646 ~ 646 (653)
-
T Consensus 298 ~ 298 (337)
T cd07852 298 V 298 (337)
T ss_pred h
Confidence 3
No 356
>KOG0584|consensus
Probab=100.00 E-value=7.4e-35 Score=311.38 Aligned_cols=248 Identities=24% Similarity=0.355 Sum_probs=203.1
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccc---cccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC--
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD---EASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK-- 441 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~---~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~-- 441 (653)
.++...||+|+|-+||+|.+ ..++..||--.++. ..++...+.|..|+.+|+.|+|||||+++.+|.+..
T Consensus 42 ~k~~evLGrGafKtVYka~D-----e~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~ 116 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFD-----EEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNK 116 (632)
T ss_pred eehhhhcccccceeeeeccc-----cccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCc
Confidence 35567899999999999975 35566666443322 233445578999999999999999999999997655
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC--CceecCCCCCCE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR--KFVHRDLATRNC 519 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~--~ivHrDLkp~NI 519 (653)
..-+|+|.+..|+|..|++++ ...+...+.++++||++||.|||++ +|||||||-+||
T Consensus 117 ~in~iTEL~TSGtLr~Y~kk~--------------------~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNI 176 (632)
T KOG0584|consen 117 TINFITELFTSGTLREYRKKH--------------------RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNI 176 (632)
T ss_pred eeeeeeecccCCcHHHHHHHh--------------------ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceE
Confidence 488999999999999999843 4567789999999999999999976 799999999999
Q ss_pred eEcCC-CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCC-CCHH
Q psy5539 520 LINDQ-MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG-LTHE 597 (653)
Q Consensus 520 Ll~~~-~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~-~~~~ 597 (653)
+|+.+ |.|||+|+|||..+... ......||+.|||||... ..|++..||||||+.++||.|+.. ||.. .++.
T Consensus 177 FinG~~G~VKIGDLGLAtl~r~s----~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eY-PYsEC~n~A 250 (632)
T KOG0584|consen 177 FVNGNLGEVKIGDLGLATLLRKS----HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEY-PYSECTNPA 250 (632)
T ss_pred EEcCCcCceeecchhHHHHhhcc----ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccC-ChhhhCCHH
Confidence 99754 89999999999876321 122357999999999766 899999999999999999999665 7754 5678
Q ss_pred HHHHHHHcCCccCCCC-CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 598 EVVKYIKEGNILQAPD-NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 598 e~~~~i~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
++.+++..|.-+.... --.+++++||.+|+.. .++|||+.|++++.+.
T Consensus 251 QIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff 299 (632)
T KOG0584|consen 251 QIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFF 299 (632)
T ss_pred HHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhh
Confidence 8999998886543322 2457899999999999 9999999999988653
No 357
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=5.1e-34 Score=303.28 Aligned_cols=251 Identities=26% Similarity=0.368 Sum_probs=197.8
Q ss_pred EEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHH-------------HHHHHHHHHHHHhhCCCCccceEEe
Q psy5539 369 YVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-------------LQTDFEREACLLAEFDHPNIVKLLG 435 (653)
Q Consensus 369 ~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~-------------~~~~f~~Ei~il~~l~HpnIv~l~g 435 (653)
+.+.||+|+||.||+|... ..++.||||.++...... ....+.+|++++++++|+||+++++
T Consensus 13 ~~~~ig~G~~g~vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDT-----LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred hhhcccCCCceeEEEEEEC-----CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4467999999999999863 356789999886542211 1124778999999999999999999
Q ss_pred EEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539 436 VCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515 (653)
Q Consensus 436 ~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk 515 (653)
++..++..++||||+. |+|.+++.. ...++......++.|++.||+|||+.+++|+||+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~--------------------~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~ 146 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR--------------------KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLS 146 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 9999999999999997 699998861 2347889999999999999999999999999999
Q ss_pred CCCEeEcCCCcEEEeccCcccccccccc------------ccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHH
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDY------------YKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWE 582 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~e 582 (653)
|+||+++.++.++|+|||+++....... ........++..|+|||.+.+. .++.++||||||+++||
T Consensus 147 ~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~e 226 (335)
T PTZ00024 147 PANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAE 226 (335)
T ss_pred HHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999976531110 0011123356789999998764 47899999999999999
Q ss_pred HHhCCCCCCCCCCHHHHHHHHHcC----Cc-----------------------cCCCCCCcHHHHHHHHHhhccCCCCCC
Q psy5539 583 IFSFALQPYYGLTHEEVVKYIKEG----NI-----------------------LQAPDNTPDALYDLMKLCWNMKPMNRP 635 (653)
Q Consensus 583 llt~~~~p~~~~~~~e~~~~i~~~----~~-----------------------~~~~~~~~~~l~~li~~cl~~dP~~RP 635 (653)
|++ +.+||.+.+..+....+... .. .......+.++.+++++||+.+|++||
T Consensus 227 l~t-g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~ 305 (335)
T PTZ00024 227 LLT-GKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERI 305 (335)
T ss_pred HHh-CCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhcc
Confidence 999 55688877766544443220 00 001124578899999999999999999
Q ss_pred CHHHHHHHHHH
Q psy5539 636 SFRTIYQTLWN 646 (653)
Q Consensus 636 s~~eil~~L~~ 646 (653)
++++++.+.|-
T Consensus 306 s~~~~l~~~~~ 316 (335)
T PTZ00024 306 SAKEALKHEYF 316 (335)
T ss_pred CHHHHhcCccc
Confidence 99999998774
No 358
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.1e-33 Score=301.92 Aligned_cols=250 Identities=23% Similarity=0.319 Sum_probs=199.4
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC-
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK- 441 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~- 441 (653)
.++|++.+.||+|+||.||+|... .++..||||.++.. ........+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDR-----RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEEC-----CCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 567999999999999999999853 35688999998643 23334557889999999999999999999986543
Q ss_pred -----ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 442 -----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 442 -----~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
..++||||+ +++|.+++. ...+++..++.++.||+.||+|||+.+|+||||||
T Consensus 89 ~~~~~~~~lv~e~~-~~~l~~~~~---------------------~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp 146 (343)
T cd07880 89 LDRFHDFYLVMPFM-GTDLGKLMK---------------------HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKP 146 (343)
T ss_pred ccccceEEEEEecC-CCCHHHHHh---------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 458999998 679988875 13478899999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
+||++++++.++|+|||++..... ......++..|+|||.+.+ ..++.++||||||+++|+|++| .+||.+.+
T Consensus 147 ~Nill~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g-~~pf~~~~ 220 (343)
T cd07880 147 GNLAVNEDCELKILDFGLARQTDS-----EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTG-KPLFKGHD 220 (343)
T ss_pred HHEEEcCCCCEEEeeccccccccc-----CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhC-CCCCCCCC
Confidence 999999999999999999975421 1223456778999999876 4688999999999999999995 45887665
Q ss_pred HHHHHHHHHcCC------------------------------ccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 596 HEEVVKYIKEGN------------------------------ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 596 ~~e~~~~i~~~~------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.......+.... ........+..+.+++.+|++.+|++|||+.+++++.|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~ 300 (343)
T cd07880 221 HLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPY 300 (343)
T ss_pred HHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 433322221100 00112356778999999999999999999999998876
Q ss_pred H
Q psy5539 646 N 646 (653)
Q Consensus 646 ~ 646 (653)
-
T Consensus 301 ~ 301 (343)
T cd07880 301 F 301 (343)
T ss_pred H
Confidence 3
No 359
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=6.3e-34 Score=301.72 Aligned_cols=254 Identities=22% Similarity=0.288 Sum_probs=205.1
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCC---
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK--- 441 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~--- 441 (653)
+|++.+.||+|+||.||+|+.. ..+..||||.+..... ....+.+.+|+.+++.++|+||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDK-----RTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPED 75 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeC-----CCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccc
Confidence 4678899999999999999864 3467899999876432 334567899999999999999999999987765
Q ss_pred --ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 442 --PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 442 --~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
..++||||++ ++|.++++ ....+++..++.++.||+.||+|||+++|+|+||||+||
T Consensus 76 ~~~~~lv~e~~~-~~l~~~l~--------------------~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~ni 134 (330)
T cd07834 76 FNDVYIVTELME-TDLHKVIK--------------------SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNI 134 (330)
T ss_pred ccceEEEecchh-hhHHHHHh--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 7899999998 48888885 223688999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccc-cCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
|+++++.++|+|||++......... .......++..|+|||.+.+. .++.++||||||+++|+|++ +.+||.+.+..
T Consensus 135 li~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~-g~~pf~~~~~~ 213 (330)
T cd07834 135 LVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLT-RKPLFPGRDYI 213 (330)
T ss_pred EEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHc-CCCCcCCCCHH
Confidence 9999999999999999765332210 112234567789999999888 89999999999999999999 45688877766
Q ss_pred HHHHHHHcCCc------------------------------cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 598 EVVKYIKEGNI------------------------------LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 598 e~~~~i~~~~~------------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+....+....- .......+.++.+++++||+.+|.+||++++++++.|-
T Consensus 214 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 292 (330)
T cd07834 214 DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYL 292 (330)
T ss_pred HHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccH
Confidence 55544433110 00112367889999999999999999999999998763
No 360
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=8.3e-34 Score=298.51 Aligned_cols=250 Identities=17% Similarity=0.283 Sum_probs=190.8
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEee
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEY 449 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey 449 (653)
+.+|.|+++.||+++ .+++.||||+++.. ......+.+.+|+++++.++|+||+++++++...+..+++|||
T Consensus 8 ~~~~~~~~v~~~~~~-------~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~ 80 (314)
T cd08216 8 KCFEDLMIVHLAKHK-------PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPL 80 (314)
T ss_pred HhhcCCceEEEEEec-------CCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEec
Confidence 334455555555443 25688999998754 3344556799999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEE
Q psy5539 450 MGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI 529 (653)
Q Consensus 450 ~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI 529 (653)
+++|+|.++++... ...+++..+..++.|++.||+|||+++|+||||||+|||+++++.+||
T Consensus 81 ~~~~~l~~~l~~~~------------------~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl 142 (314)
T cd08216 81 MAYGSCEDLLKTHF------------------PEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVL 142 (314)
T ss_pred cCCCCHHHHHHHhc------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEE
Confidence 99999999997321 234788889999999999999999999999999999999999999999
Q ss_pred eccCccccccccccc-----cCCCCCCCccccccchhhccC--CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH
Q psy5539 530 ADFGLSRKMYLQDYY-----KGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE-VVK 601 (653)
Q Consensus 530 ~DfGla~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~--~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e-~~~ 601 (653)
+|||.+......... .......++..|+|||.+... .++.++||||||+++|||++ +..||....... ..+
T Consensus 143 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~-g~~pf~~~~~~~~~~~ 221 (314)
T cd08216 143 SGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELAN-GHVPFKDMPATQMLLE 221 (314)
T ss_pred ecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Confidence 999998755322211 111223456789999998764 58899999999999999999 556887654432 223
Q ss_pred HHHcCC---------------cc-----------------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 602 YIKEGN---------------IL-----------------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 602 ~i~~~~---------------~~-----------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.+.... .. ......+.++.+++.+||..+|++|||+++++++++-
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~ 298 (314)
T cd08216 222 KVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFF 298 (314)
T ss_pred HHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchH
Confidence 322110 00 0001123578899999999999999999999998873
No 361
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.1e-33 Score=301.89 Aligned_cols=247 Identities=23% Similarity=0.338 Sum_probs=194.8
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC---
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--- 440 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--- 440 (653)
++|...+.||+|+||.||+|+.. .++..||||.++... .+.....+.+|+.+++.++|+||+++++++...
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 89 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDK-----RTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSG 89 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeC-----CCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccC
Confidence 47889999999999999999863 356789999986432 233345678999999999999999999998654
Q ss_pred ---CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 441 ---KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 441 ---~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
...++|+||+.. +|.+++. ..+++..+..++.|++.||+|||+++++||||||+
T Consensus 90 ~~~~~~~lv~e~~~~-~l~~~~~----------------------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~ 146 (342)
T cd07879 90 DEFQDFYLVMPYMQT-DLQKIMG----------------------HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPG 146 (342)
T ss_pred CCCceEEEEeccccc-CHHHHHc----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence 346999999864 6766542 24788899999999999999999999999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
|||++.++.+||+|||+++.... ......++..|+|||.+.+ ..++.++||||||+++|||++|. .||.+.+.
T Consensus 147 NIll~~~~~~kL~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~-~pf~~~~~ 220 (342)
T cd07879 147 NLAVNEDCELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK-TLFKGKDY 220 (342)
T ss_pred HEEECCCCCEEEeeCCCCcCCCC-----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCC-CCCCCCCH
Confidence 99999999999999999875321 1223355778999999876 46899999999999999999954 58877665
Q ss_pred HHHHHHHHcCC----------------------ccCC--------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 597 EEVVKYIKEGN----------------------ILQA--------PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 597 ~e~~~~i~~~~----------------------~~~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.+..+.... .... ....+..+.+++.+||+.+|.+||++++++.+.|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~ 299 (342)
T cd07879 221 LDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPY 299 (342)
T ss_pred HHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 44333322210 0000 1245678999999999999999999999998854
No 362
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=8.6e-34 Score=292.83 Aligned_cols=251 Identities=27% Similarity=0.402 Sum_probs=200.9
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCL 445 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~L 445 (653)
|+..+.||+|+||.||+|+.. .++..+|+|.++... .+...+.+.+|+.++++++|+||+++++++...+..++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~-----~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDK-----KTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeec-----CCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEE
Confidence 356678999999999999863 356889999987643 23344567889999999999999999999999999999
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
|+||++ ++|.+++... ...+++..+..++.|++.||+|||+.+|+|+||+|+||++++++
T Consensus 76 v~e~~~-~~l~~~i~~~-------------------~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~ 135 (282)
T cd07829 76 VFEYCD-MDLKKYLDKR-------------------PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG 135 (282)
T ss_pred EecCcC-cCHHHHHHhh-------------------ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC
Confidence 999998 5999999722 13588999999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK 604 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~ 604 (653)
.++|+|||+++....... .......+..|+|||.+... .++.++||||||+++|||++| .+||.+.+..+....+.
T Consensus 136 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~-~~~~~~~~~~~~~~~~~ 212 (282)
T cd07829 136 VLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITG-KPLFPGDSEIDQLFKIF 212 (282)
T ss_pred CEEEecCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhC-CCCCCCccHHHHHHHHH
Confidence 999999999876532221 12223446779999998777 889999999999999999996 56887766544333322
Q ss_pred cC--------------------Ccc--------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 605 EG--------------------NIL--------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 605 ~~--------------------~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.. ... ......+..+.+++++||..+|++||++++++++.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~ 281 (282)
T cd07829 213 QILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281 (282)
T ss_pred HHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcC
Confidence 10 000 001234678999999999999999999999998865
No 363
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.2e-33 Score=296.93 Aligned_cols=256 Identities=26% Similarity=0.327 Sum_probs=196.7
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhC-CCCccceEEeEEecC---
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVG--- 440 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~--- 440 (653)
+|.+.+.||+|+||.||+++..+ ...+..||+|.++... .....+.+.+|+++++++ +||||+++++.....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 77 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAE---TSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN 77 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCC---CCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc
Confidence 46788999999999999999743 1125789999987532 222345678899999999 599999999875432
Q ss_pred -CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 441 -KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 441 -~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
...++++||+. ++|.+++. ....+++..+..++.||+.||.|||+.+++||||||+||
T Consensus 78 ~~~~~~~~e~~~-~~L~~~l~--------------------~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Ni 136 (332)
T cd07857 78 FNELYLYEELME-ADLHQIIR--------------------SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNL 136 (332)
T ss_pred CCcEEEEEeccc-CCHHHHHh--------------------cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHe
Confidence 45788899886 68998885 224578999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCcccccccccccc--CCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
|+++++.+||+|||+++......... ......++..|+|||.+.+ ..++.++||||||+++|+|++| .+||.+.+.
T Consensus 137 li~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g-~~pf~~~~~ 215 (332)
T cd07857 137 LVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGR-KPVFKGKDY 215 (332)
T ss_pred EEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhC-CcCCCCCCH
Confidence 99999999999999997653222111 1122356888999998766 4689999999999999999974 568876554
Q ss_pred HHHHHHHHcC---------------------------C---ccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 597 EEVVKYIKEG---------------------------N---ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 597 ~e~~~~i~~~---------------------------~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.+.+..+... . +.......+..+.+++.+|++.+|.+|||+.+++++.|-
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~ 295 (332)
T cd07857 216 VDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYL 295 (332)
T ss_pred HHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence 3333222110 0 001112357889999999999999999999999998874
No 364
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.3e-33 Score=299.78 Aligned_cols=252 Identities=23% Similarity=0.280 Sum_probs=198.6
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG 440 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~ 440 (653)
..+++|.+.+.||+|+||.||+|... .++..||+|+++... .....+.+.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDT-----KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEc-----CCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 34578999999999999999999853 356889999987532 223345678899999999999999999987543
Q ss_pred ------CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539 441 ------KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514 (653)
Q Consensus 441 ------~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL 514 (653)
...++++|++ +++|.++++ ...+++..+..++.|++.||+|||+.+|+||||
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~---------------------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dl 146 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVK---------------------CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDL 146 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHh---------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 3467888876 779988775 124788999999999999999999999999999
Q ss_pred CCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q psy5539 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYG 593 (653)
Q Consensus 515 kp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~ 593 (653)
||+||++++++.+||+|||+++.... ......++..|+|||.+.+ ..++.++||||||+++|||++|. .||..
T Consensus 147 kp~NIll~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~-~pf~~ 220 (345)
T cd07877 147 KPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR-TLFPG 220 (345)
T ss_pred ChHHEEEcCCCCEEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCC-CCCCC
Confidence 99999999999999999999875421 1223456778999998866 46889999999999999999965 57766
Q ss_pred CCHHHHHHHHHcCCc----------------------cC--------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy5539 594 LTHEEVVKYIKEGNI----------------------LQ--------APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQT 643 (653)
Q Consensus 594 ~~~~e~~~~i~~~~~----------------------~~--------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 643 (653)
.+..+....+..... .. .....+.++.+++.+|++.+|.+||++.+++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 221 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 554443332211100 00 011356789999999999999999999999999
Q ss_pred HHH
Q psy5539 644 LWN 646 (653)
Q Consensus 644 L~~ 646 (653)
.|-
T Consensus 301 ~~f 303 (345)
T cd07877 301 AYF 303 (345)
T ss_pred hhh
Confidence 874
No 365
>KOG0983|consensus
Probab=100.00 E-value=2.1e-34 Score=279.11 Aligned_cols=257 Identities=22% Similarity=0.355 Sum_probs=210.4
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEec
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAV 439 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~ 439 (653)
....++++++..||.|+-|.|++++.. .++..+|||......+....+++...+.++..- +.|.||+.+|+|..
T Consensus 88 ~~dindl~~l~dlGsGtcG~V~k~~~r-----s~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~ 162 (391)
T KOG0983|consen 88 QADINDLENLGDLGSGTCGQVWKMRFR-----STGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT 162 (391)
T ss_pred ccChHHhhhHHhhcCCCccceEEEEEc-----ccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee
Confidence 344567788899999999999999874 467899999998776666666677777666554 48999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCC
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVHRDLATRN 518 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivHrDLkp~N 518 (653)
+...++.||.|.- .+..+|++. .+++++..+-++...+++||.||-+ ++|+|||+||+|
T Consensus 163 n~dV~IcMelMs~-C~ekLlkri-------------------k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSN 222 (391)
T KOG0983|consen 163 NTDVFICMELMST-CAEKLLKRI-------------------KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSN 222 (391)
T ss_pred CchHHHHHHHHHH-HHHHHHHHh-------------------cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccc
Confidence 9999999999854 566666522 2458888889999999999999986 589999999999
Q ss_pred EeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC---CCCCchhHHHHHHHHHHHHhCCCCCCCCC-
Q psy5539 519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN---KYTVESDVWAFGVCLWEIFSFALQPYYGL- 594 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~t~ksDVwSlGvvl~ellt~~~~p~~~~- 594 (653)
||+|+.|++|++|||++.++... +..+..+|-+.|||||.+... +|+.++||||||++|+||.|| ..||.+-
T Consensus 223 ILlDe~GniKlCDFGIsGrlvdS---kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg-~yPy~~c~ 298 (391)
T KOG0983|consen 223 ILLDERGNIKLCDFGISGRLVDS---KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATG-QYPYKGCK 298 (391)
T ss_pred eEEccCCCEEeecccccceeecc---cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcc-cCCCCCCC
Confidence 99999999999999999876432 345667788899999998754 789999999999999999995 4588774
Q ss_pred CHHHHHHHHHcCCccCCC--CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 595 THEEVVKYIKEGNILQAP--DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 595 ~~~e~~~~i~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
...+++-.|.+.+.+..+ ...++.+.+++..||.+|+.+||...++++|.+-
T Consensus 299 tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi 352 (391)
T KOG0983|consen 299 TDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFI 352 (391)
T ss_pred ccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcce
Confidence 456777777665443333 2378999999999999999999999999998753
No 366
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.4e-33 Score=301.15 Aligned_cols=253 Identities=26% Similarity=0.330 Sum_probs=196.3
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC----
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG---- 440 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~---- 440 (653)
.+|.+.+.||+|+||.||+|... .++..||+|.+..... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~-----~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDS-----DCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDL 78 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEEC-----CCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhccccccc
Confidence 57899999999999999999863 4568899999865433 2345688999999999999999999876543
Q ss_pred ----------CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCce
Q psy5539 441 ----------KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFV 510 (653)
Q Consensus 441 ----------~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~iv 510 (653)
...++||||++ ++|.+++. ...+++..+..++.||++||.|||+.+|+
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~giv 136 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYME-TDLANVLE---------------------QGPLSEEHARLFMYQLLRGLKYIHSANVL 136 (342)
T ss_pred ccccccccccceEEEEeeccc-ccHHHHHH---------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 35789999997 58988875 13478899999999999999999999999
Q ss_pred ecCCCCCCEeEc-CCCcEEEeccCcccccccccccc-CCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCC
Q psy5539 511 HRDLATRNCLIN-DQMVVKIADFGLSRKMYLQDYYK-GDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFA 587 (653)
Q Consensus 511 HrDLkp~NILl~-~~~~vkI~DfGla~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~ 587 (653)
||||||+||+++ +++.+||+|||+++......... ......++..|+|||.+.. ..++.++||||||+++|||++|.
T Consensus 137 H~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~ 216 (342)
T cd07854 137 HRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216 (342)
T ss_pred cCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCC
Confidence 999999999997 56688999999997653221111 1122345778999998754 56889999999999999999965
Q ss_pred CCCCCCCCHHHHHHHHHcCC------------------------cc-----CCCCCCcHHHHHHHHHhhccCCCCCCCHH
Q psy5539 588 LQPYYGLTHEEVVKYIKEGN------------------------IL-----QAPDNTPDALYDLMKLCWNMKPMNRPSFR 638 (653)
Q Consensus 588 ~~p~~~~~~~e~~~~i~~~~------------------------~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 638 (653)
.||.+.+..+....+.+.. .. ......+.++.+++.+||..+|.+|||++
T Consensus 217 -~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 295 (342)
T cd07854 217 -PLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAE 295 (342)
T ss_pred -CCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHH
Confidence 5777665443333222110 00 01134678899999999999999999999
Q ss_pred HHHHHHHH
Q psy5539 639 TIYQTLWN 646 (653)
Q Consensus 639 eil~~L~~ 646 (653)
+++++.|-
T Consensus 296 ell~h~~~ 303 (342)
T cd07854 296 EALMHPYM 303 (342)
T ss_pred HHhCCCcc
Confidence 99988764
No 367
>KOG4645|consensus
Probab=100.00 E-value=1.4e-35 Score=336.50 Aligned_cols=254 Identities=22% Similarity=0.312 Sum_probs=213.6
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
+++....||.|.||.||-|.. ..+|...|+|-++-... ........+|+.++..|+|||+|+++|+-...+..+
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN-----~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVN-----LDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred eeccccccCCcceeeeEEeec-----CCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 455566799999999999974 35778899998764432 233456789999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
|.|||+.+|+|.+.++ .....++.....+..|++.|++|||++|||||||||.||+|+.+
T Consensus 1311 IFMEyC~~GsLa~ll~--------------------~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~ 1370 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLE--------------------HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN 1370 (1509)
T ss_pred HHHHHhccCcHHHHHH--------------------hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC
Confidence 9999999999999987 22335666677888999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccc--cCCCCCCCccccccchhhccCC---CCCchhHHHHHHHHHHHHhCCCCCCCCCC-HHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYY--KGDENDAIPVRWMPLESILYNK---YTVESDVWAFGVCLWEIFSFALQPYYGLT-HEE 598 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~---~t~ksDVwSlGvvl~ellt~~~~p~~~~~-~~e 598 (653)
|.+|++|||.|..+...-.. ..-....||+.|||||++.+.. ...+.||||||||++||+||.. ||...+ ...
T Consensus 1371 g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkr-PW~~~dne~a 1449 (1509)
T KOG4645|consen 1371 GLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKR-PWAELDNEWA 1449 (1509)
T ss_pred CcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCC-chhhccchhH
Confidence 99999999999876433111 1112457899999999998754 5578999999999999999776 776655 457
Q ss_pred HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 599 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
++..+-.|..++.|+.++.+-++++..|+..||++|.++.||+++-+
T Consensus 1450 IMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f 1496 (1509)
T KOG4645|consen 1450 IMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAF 1496 (1509)
T ss_pred HHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhc
Confidence 88889999999999999999999999999999999999999987753
No 368
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.8e-33 Score=296.99 Aligned_cols=252 Identities=26% Similarity=0.309 Sum_probs=198.5
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEec-
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAV- 439 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~- 439 (653)
...++|.+.+.||+|+||.||+|+.. .++..||||.+.... .....+.+.+|+++++.++||||+++++++..
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 81 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQ-----LTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP 81 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEEC-----CCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC
Confidence 35678999999999999999999854 356789999876432 22334567899999999999999999998865
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
+...++|+||+ +++|.++++ ...++...+..++.|+++||.|||+.+|+||||+|+||
T Consensus 82 ~~~~~lv~e~~-~~~L~~~~~---------------------~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Ni 139 (328)
T cd07856 82 LEDIYFVTELL-GTDLHRLLT---------------------SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNI 139 (328)
T ss_pred CCcEEEEeehh-ccCHHHHHh---------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHE
Confidence 56789999998 568988875 12467888889999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
|+++++.++|+|||++..... ......++..|+|||.+.+ ..++.++||||||+++|||++| .+||.+.....
T Consensus 140 li~~~~~~~l~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg-~~~f~~~~~~~ 213 (328)
T cd07856 140 LINENCDLKICDFGLARIQDP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEG-KPLFPGKDHVN 213 (328)
T ss_pred eECCCCCEEeCccccccccCC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhC-CCCCCCCCHHH
Confidence 999999999999999875321 1122345778999998766 5689999999999999999995 56887655432
Q ss_pred HHHHHHc---------------CC------------ccC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 599 VVKYIKE---------------GN------------ILQ---APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 599 ~~~~i~~---------------~~------------~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
....+.+ .. ..+ ....++..+.++|++||+.+|++||++++++.+.|.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~ 291 (328)
T cd07856 214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYL 291 (328)
T ss_pred HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcc
Confidence 2211110 00 000 112467899999999999999999999999988653
No 369
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.3e-33 Score=295.84 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=195.5
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecC--
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVG-- 440 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~-- 440 (653)
.++|.+.+.||+|+||.||+|+.. .++..+|||.+..... ......+.+|++++++++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~-----~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQI-----KTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPD 81 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEEC-----CCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccc
Confidence 468999999999999999999864 3557899998864322 22234567899999999999999999887443
Q ss_pred ------CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539 441 ------KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514 (653)
Q Consensus 441 ------~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL 514 (653)
...++|+||+.+ +|.+.+.. ....+++..+..++.|+++||.|||+++|+|+||
T Consensus 82 ~~~~~~~~~~lv~~~~~~-~l~~~~~~-------------------~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl 141 (311)
T cd07866 82 KSKRKRGSVYMVTPYMDH-DLSGLLEN-------------------PSVKLTESQIKCYMLQLLEGINYLHENHILHRDI 141 (311)
T ss_pred cccccCceEEEEEecCCc-CHHHHHhc-------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 346999999875 77777651 1235899999999999999999999999999999
Q ss_pred CCCCEeEcCCCcEEEeccCccccccccccccC---------CCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHH
Q psy5539 515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKG---------DENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIF 584 (653)
Q Consensus 515 kp~NILl~~~~~vkI~DfGla~~~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ell 584 (653)
||+|||+++++.++|+|||+++.......... .....++..|+|||.+.+. .++.++||||||+++|||+
T Consensus 142 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~ 221 (311)
T cd07866 142 KAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMF 221 (311)
T ss_pred CHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHH
Confidence 99999999999999999999976532221111 0112346779999988654 5899999999999999999
Q ss_pred hCCCCCCCCCCHHHHHHHHHcCCc----------------------cCCC-------CCCcHHHHHHHHHhhccCCCCCC
Q psy5539 585 SFALQPYYGLTHEEVVKYIKEGNI----------------------LQAP-------DNTPDALYDLMKLCWNMKPMNRP 635 (653)
Q Consensus 585 t~~~~p~~~~~~~e~~~~i~~~~~----------------------~~~~-------~~~~~~l~~li~~cl~~dP~~RP 635 (653)
+| .+||.+.+..+..+.+..... ...+ ......+.+++.+||+.+|.+||
T Consensus 222 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~ 300 (311)
T cd07866 222 TR-RPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRL 300 (311)
T ss_pred hC-CCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCc
Confidence 95 568877665544333321000 0000 12346788999999999999999
Q ss_pred CHHHHHHHHH
Q psy5539 636 SFRTIYQTLW 645 (653)
Q Consensus 636 s~~eil~~L~ 645 (653)
|+.+++.+.|
T Consensus 301 t~~ell~~~~ 310 (311)
T cd07866 301 TASDALEHPY 310 (311)
T ss_pred CHHHHhcCCC
Confidence 9999998754
No 370
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.6e-33 Score=300.74 Aligned_cols=249 Identities=24% Similarity=0.327 Sum_probs=200.2
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
.++|.+.+.||+|+||.||+|+.. .++..||||++.... .....+.+.+|+.+++.++|+||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDT-----KTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASS 88 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEEC-----CCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccc
Confidence 457999999999999999999864 356789999987532 22334567889999999999999999988766554
Q ss_pred ------eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 443 ------MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 443 ------~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
.++|+||+ +++|.+++. ...+++..+..++.|++.||+|||+.+|+||||||
T Consensus 89 ~~~~~~~~lv~e~~-~~~L~~~~~---------------------~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp 146 (343)
T cd07851 89 LEDFQDVYLVTHLM-GADLNNIVK---------------------CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKP 146 (343)
T ss_pred ccccccEEEEEecC-CCCHHHHHh---------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 89999998 569999885 13588999999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
+||++++++.++|+|||++...... .....++..|+|||.+.. ..++.++||||||+++|||++|. .||.+.+
T Consensus 147 ~Nill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~-~pf~~~~ 220 (343)
T cd07851 147 SNIAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK-TLFPGSD 220 (343)
T ss_pred HHeEECCCCCEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCC-CCCCCCC
Confidence 9999999999999999999754221 223456778999998865 36789999999999999999954 5887666
Q ss_pred HHHHHHHHHcCCcc------------------------------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 596 HEEVVKYIKEGNIL------------------------------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 596 ~~e~~~~i~~~~~~------------------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
..+....+.+.... ......+.++.+++++||+.+|.+|||+.+|+++.|
T Consensus 221 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~ 300 (343)
T cd07851 221 HIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPY 300 (343)
T ss_pred hHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCC
Confidence 55444443221100 011235788999999999999999999999998875
No 371
>KOG0666|consensus
Probab=100.00 E-value=7e-35 Score=286.88 Aligned_cols=264 Identities=24% Similarity=0.352 Sum_probs=198.7
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH-HHHHHHHHHHHHHhhCCCCccceEEeEEec-CCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE-YLQTDFEREACLLAEFDHPNIVKLLGVCAV-GKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~-~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~-~~~ 442 (653)
..|+.+..||+|.||.||+|.-....+.. .+.+|||+++.+... ......-||+.+++.++||||+.|..++.. +..
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr-~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKR-TKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCccc-chhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 46788889999999999999654322221 357999999865221 123456899999999999999999999876 788
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.+|++||+++ ||...++.++. .....++.....+|++||+.|++|||++=|+||||||.||||.
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~---------------~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvm 166 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRA---------------SKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVM 166 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhcc---------------chhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEe
Confidence 9999999988 99999985542 1235789999999999999999999999999999999999998
Q ss_pred CC----CcEEEeccCcccccccccccc-CCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCC-------
Q psy5539 523 DQ----MVVKIADFGLSRKMYLQDYYK-GDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQ------- 589 (653)
Q Consensus 523 ~~----~~vkI~DfGla~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~------- 589 (653)
.+ |.|||+|||+++.+...-... .......|+.|.|||.+.+. .||.+.||||.|||+.||++- .+
T Consensus 167 gdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl-~PlF~g~E~ 245 (438)
T KOG0666|consen 167 GDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL-EPLFKGREE 245 (438)
T ss_pred ccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc-Cccccchhh
Confidence 77 999999999999764332222 22334568999999999986 589999999999999999972 22
Q ss_pred ------CCCCCCHHHHHHHH------------------------HcCCccCC--------CCCCcHHHHHHHHHhhccCC
Q psy5539 590 ------PYYGLTHEEVVKYI------------------------KEGNILQA--------PDNTPDALYDLMKLCWNMKP 631 (653)
Q Consensus 590 ------p~~~~~~~e~~~~i------------------------~~~~~~~~--------~~~~~~~l~~li~~cl~~dP 631 (653)
||.....+.+++.+ +....... -..-++..++|+.++|..||
T Consensus 246 k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP 325 (438)
T KOG0666|consen 246 KIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDP 325 (438)
T ss_pred hcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCc
Confidence 33221111122111 10000000 01123457899999999999
Q ss_pred CCCCCHHHHHHHHHH
Q psy5539 632 MNRPSFRTIYQTLWN 646 (653)
Q Consensus 632 ~~RPs~~eil~~L~~ 646 (653)
.+|.|+++.+++...
T Consensus 326 ~kRIta~qAleh~yF 340 (438)
T KOG0666|consen 326 IKRITAEQALEHPYF 340 (438)
T ss_pred hhhccHHHHhccccc
Confidence 999999999988643
No 372
>KOG0662|consensus
Probab=100.00 E-value=2e-34 Score=263.53 Aligned_cols=252 Identities=27% Similarity=0.437 Sum_probs=204.2
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
.|.-+++||+|.||+||+|+. .++...||+|+++-+. .+..-....+||.+++.++|.|||+++++..+++.+-
T Consensus 3 ~ydkmekigegtygtvfkarn-----~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARN-----RETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEeccc-----CCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeE
Confidence 345567899999999999984 3577899999987442 2333446789999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
||+||+.. +|..|.... .+.++.+...+++.|+++||.|.|++++.||||||+|.||+.+
T Consensus 78 lvfe~cdq-dlkkyfdsl-------------------ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~n 137 (292)
T KOG0662|consen 78 LVFEFCDQ-DLKKYFDSL-------------------NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRN 137 (292)
T ss_pred EeHHHhhH-HHHHHHHhc-------------------CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccC
Confidence 99999965 888887622 3567888999999999999999999999999999999999999
Q ss_pred CcEEEeccCccccccccccccCCCCCCCccccccchhhccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539 525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI 603 (653)
Q Consensus 525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i 603 (653)
|++|++|||+++.+...- +--+....|..|.+|.++.+.+ |+...|+||-||++.|+...|.+.|.+.+..+....|
T Consensus 138 gelkladfglarafgipv--rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkri 215 (292)
T KOG0662|consen 138 GELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI 215 (292)
T ss_pred CcEEecccchhhhcCCce--EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHH
Confidence 999999999998653221 1224456788999999999875 7899999999999999999999999998887766555
Q ss_pred Hc--C-----C---ccCCCC------------------CCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 604 KE--G-----N---ILQAPD------------------NTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 604 ~~--~-----~---~~~~~~------------------~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
-. | + +.+.|+ .....-++++++.+.-+|.+|.++++.++++
T Consensus 216 f~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhp 284 (292)
T KOG0662|consen 216 FRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHP 284 (292)
T ss_pred HHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCc
Confidence 32 1 0 011111 1223457899999999999999999998875
No 373
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.2e-32 Score=317.52 Aligned_cols=147 Identities=28% Similarity=0.455 Sum_probs=130.8
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++|.+.+.||+|+||.||+|.+. .++..||||+++.. ........+.+|+.+++.++|+||+++++++.....
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKK-----NNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEEC-----CCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCE
Confidence 57899999999999999999864 35678999998743 233445678999999999999999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.+|||||+.+++|.++++. ...+++..++.|+.||+.||.|||+++|+||||||+||||+
T Consensus 79 ~~lVmEy~~g~~L~~li~~--------------------~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~ 138 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHI--------------------YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS 138 (669)
T ss_pred EEEEEeCCCCCCHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc
Confidence 9999999999999999862 23478888999999999999999999999999999999999
Q ss_pred CCCcEEEeccCccc
Q psy5539 523 DQMVVKIADFGLSR 536 (653)
Q Consensus 523 ~~~~vkI~DfGla~ 536 (653)
.++.+||+|||+++
T Consensus 139 ~~g~vkL~DFGls~ 152 (669)
T cd05610 139 NEGHIKLTDFGLSK 152 (669)
T ss_pred CCCCEEEEeCCCCc
Confidence 99999999999986
No 374
>cd07468 CRD_TK_ROR2 Cysteine-rich domain of tyrosine kinase-like orphan receptor 2. The cysteine-rich domain (CRD) is an essential part of the tyrosine kinase-like orphan receptor (Ror2), a conserved family of tyrosine kinases that function in various processes, including neuronal and skeletal development, cell polarity, and cell movement. Ror proteins are receptors of Wnt proteins, which are key players in a number of fundamental cellular processes in embryogenesis and postnatal development. In different cellular contexts, Ror proteins can either activate or repress transcription of Wnt target genes, and can modulate Wnt signaling by sequestering Wnt ligands. In addition, a number of Wnt-independent functions have been proposed for both Ror1 and Ror2.
Probab=100.00 E-value=1.8e-34 Score=255.91 Aligned_cols=136 Identities=22% Similarity=0.543 Sum_probs=119.4
Q ss_pred CCCccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHH-HHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCC
Q psy5539 31 PQGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMA-LWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIP 109 (653)
Q Consensus 31 ~~g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~-~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~ 109 (653)
.+|||++|+|+||++||.+ ..||++... ++++++++|+++ +|.+.+++||+.|++||+++||||+||.|++++..|
T Consensus 1 ~~G~C~~Y~G~vC~~yL~~-~~V~v~~~~--~~~~ie~~l~aa~~~i~~s~~ls~~Cr~~A~~~LC~~~Fp~C~~~~~~p 77 (140)
T cd07468 1 KDGFCQPYRGIACARFIGN-RTIYVDSLQ--MQGEIENRITAAFTMIGTSTHLSDQCSQFAIPSFCHFVFPLCDDRSRTP 77 (140)
T ss_pred CCCcceeccChHHHHHhCC-CeEEEecCC--chHHHHHHHHHHHhhhhccccccHHHHHHHHHHHHHHcCCCCCCCCCCC
Confidence 3799999999999999985 569997764 345667766665 577778999999999999999999999999999999
Q ss_pred CCCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCCCCCCCCCCcccCCCCcCCCCCCC
Q psy5539 110 MSLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELPNCDTLPKYEVVNGKPTCSHAQLT 176 (653)
Q Consensus 110 ~~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp~C~~lp~~~~~~~~~~C~~~~~~ 176 (653)
+|+|+||++|+++++++|++||++++++...+ +++.||+|+.||... +..+++|++++++
T Consensus 78 ~pr~iCreeC~~l~~~~C~~Ey~~a~~~~~i~------~~~~LP~C~~LP~~~-~~~~~~C~riGi~ 137 (140)
T cd07468 78 KPRELCRDECEVLENDLCRQEYNIARSNPLIL------MQLQLPKCEELPLPE-SPEAANCMRIGIP 137 (140)
T ss_pred CCcchHHHHHHHHHHHHhHHHHHHHhhccccc------ccccCCchhhCCCCC-CCCCCCcceeCCc
Confidence 99999999999999999999999999997443 568899999999876 3788999999876
No 375
>KOG0607|consensus
Probab=100.00 E-value=1.9e-33 Score=277.52 Aligned_cols=248 Identities=23% Similarity=0.356 Sum_probs=204.3
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCceEEEEee
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLFEY 449 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~~~LV~Ey 449 (653)
+.||+|+|+.|--+.. ..++..+|||++.+. ....+.++.+|++++... .|+||+.|+.+++++..+|||||-
T Consensus 84 e~LGeGAyasVqtcv~-----i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEK 157 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVS-----IQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEK 157 (463)
T ss_pred HHhcCccceeeeeeee-----eccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEec
Confidence 4589999999988763 356788999999765 445677888999999988 599999999999999999999999
Q ss_pred cCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC---c
Q psy5539 450 MGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM---V 526 (653)
Q Consensus 450 ~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~---~ 526 (653)
|.||.|..++. +...+++.++.+++++|+.||.|||.+||.||||||+|||-.+.. -
T Consensus 158 m~GGplLshI~--------------------~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsP 217 (463)
T KOG0607|consen 158 MRGGPLLSHIQ--------------------KRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSP 217 (463)
T ss_pred ccCchHHHHHH--------------------HhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCc
Confidence 99999999886 335689999999999999999999999999999999999986544 5
Q ss_pred EEEeccCccccccccccccC-C----CCCCCccccccchhhc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC-
Q psy5539 527 VKIADFGLSRKMYLQDYYKG-D----ENDAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSFALQPYYGLT- 595 (653)
Q Consensus 527 vkI~DfGla~~~~~~~~~~~-~----~~~~~t~~y~aPE~~~-----~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~- 595 (653)
+||+||.|..-+........ . ....|+..|||||+.. ...|+.+.|.||||||||-|++ |.+||.|.-
T Consensus 218 vKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLs-GYpPFvG~Cg 296 (463)
T KOG0607|consen 218 VKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLS-GYPPFVGHCG 296 (463)
T ss_pred eeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHh-CCCCccCccC
Confidence 79999988754322211111 1 1234566899999864 2368999999999999999998 667998642
Q ss_pred --------------HHHHHHHHHcCCccCCCC----CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 596 --------------HEEVVKYIKEGNILQAPD----NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 596 --------------~~e~~~~i~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
...+++.|.+|.. ++|+ .++.+..++++..+-.++.+|.++.++++++|-
T Consensus 297 ~dCGWdrGe~Cr~CQ~~LFesIQEGkY-eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~ 364 (463)
T KOG0607|consen 297 ADCGWDRGEVCRVCQNKLFESIQEGKY-EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWV 364 (463)
T ss_pred CcCCccCCCccHHHHHHHHHHHhccCC-cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccc
Confidence 3468899999986 4554 478899999999999999999999999998874
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=6.4e-33 Score=280.18 Aligned_cols=228 Identities=17% Similarity=0.211 Sum_probs=183.3
Q ss_pred cCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeecCCCCh
Q psy5539 376 GAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDL 455 (653)
Q Consensus 376 G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~~~gsL 455 (653)
|.||+||++++. .+++.+|+|+++... .+.+|...+....||||+++++++...+..++||||+++|+|
T Consensus 4 g~~~~v~~~~~~-----~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 72 (237)
T cd05576 4 GVIDKVLLVMDT-----RTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKL 72 (237)
T ss_pred cccceEEEEEEc-----cCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCH
Confidence 899999999864 456789999997642 234455556667899999999999999999999999999999
Q ss_pred HHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCcc
Q psy5539 456 NDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535 (653)
Q Consensus 456 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla 535 (653)
.+++.. ...+++..+..++.|+++||+|||+++|+||||||+||++++++.++++|||++
T Consensus 73 ~~~l~~--------------------~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~ 132 (237)
T cd05576 73 WSHISK--------------------FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRW 132 (237)
T ss_pred HHHHHH--------------------hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccch
Confidence 999862 134789999999999999999999999999999999999999999999999988
Q ss_pred ccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccCCCCCC
Q psy5539 536 RKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNT 615 (653)
Q Consensus 536 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~~~~~~ 615 (653)
...... .....++..|+|||.+....++.++||||+|+++|||++|. .|+..... . +........+..+
T Consensus 133 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~-~~~~~~~~-~----~~~~~~~~~~~~~ 201 (237)
T cd05576 133 SEVEDS-----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGK-TLVECHPS-G----INTHTTLNIPEWV 201 (237)
T ss_pred hccccc-----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCc-chhhcCch-h----cccccccCCcccC
Confidence 654221 12234466799999998888999999999999999999965 34432211 1 1111223456678
Q ss_pred cHHHHHHHHHhhccCCCCCCCH-----HHHHHHHH
Q psy5539 616 PDALYDLMKLCWNMKPMNRPSF-----RTIYQTLW 645 (653)
Q Consensus 616 ~~~l~~li~~cl~~dP~~RPs~-----~eil~~L~ 645 (653)
+..+++++.+|++.||++||++ +++++|.|
T Consensus 202 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~ 236 (237)
T cd05576 202 SEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPF 236 (237)
T ss_pred CHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCC
Confidence 8999999999999999999986 77776653
No 377
>KOG0612|consensus
Probab=100.00 E-value=1.1e-33 Score=317.45 Aligned_cols=263 Identities=22% Similarity=0.290 Sum_probs=222.3
Q ss_pred cccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--ccHHHHHHHHHHHHHHhhCCCCccceE
Q psy5539 356 KLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREACLLAEFDHPNIVKL 433 (653)
Q Consensus 356 ~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~~~~~~~~f~~Ei~il~~l~HpnIv~l 433 (653)
+...+...+++|.+++.||+|+||.|..++.+ .+++++|.|++..- .......-|..|-.+|..-+.+=|+.+
T Consensus 66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k-----~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~L 140 (1317)
T KOG0612|consen 66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHK-----STEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQL 140 (1317)
T ss_pred HHHHHhCCHHhhHHHHHhcccccceeEEEEee-----ccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHH
Confidence 44566788899999999999999999999975 46789999999752 112234568899999999999999999
Q ss_pred EeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecC
Q psy5539 434 LGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRD 513 (653)
Q Consensus 434 ~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrD 513 (653)
.-.|.+...+|||||||+||||-.+|. +...+++..+..++..|+.||.-||+.|+||||
T Consensus 141 hyAFQD~~~LYlVMdY~pGGDlltLlS--------------------k~~~~pE~~ArFY~aEiVlAldslH~mgyVHRD 200 (1317)
T KOG0612|consen 141 HYAFQDERYLYLVMDYMPGGDLLTLLS--------------------KFDRLPEDWARFYTAEIVLALDSLHSMGYVHRD 200 (1317)
T ss_pred HHHhcCccceEEEEecccCchHHHHHh--------------------hcCCChHHHHHHHHHHHHHHHHHHHhccceecc
Confidence 999999999999999999999999985 233689999999999999999999999999999
Q ss_pred CCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhc----c-CCCCCchhHHHHHHHHHHHHhCCC
Q psy5539 514 LATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL----Y-NKYTVESDVWAFGVCLWEIFSFAL 588 (653)
Q Consensus 514 Lkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~----~-~~~t~ksDVwSlGvvl~ellt~~~ 588 (653)
|||+|||||..|++||+|||.+-.+..+ ..-......|||-|.+||++. + +.|....|.||+||++|||+. |.
T Consensus 201 iKPDNvLld~~GHikLADFGsClkm~~d-G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMly-G~ 278 (1317)
T KOG0612|consen 201 IKPDNVLLDKSGHIKLADFGSCLKMDAD-GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLY-GE 278 (1317)
T ss_pred CCcceeEecccCcEeeccchhHHhcCCC-CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHc-CC
Confidence 9999999999999999999998776433 334456678999999999985 3 679999999999999999997 55
Q ss_pred CCCCCCCHHHHHHHHHcC-CccCCC--CCCcHHHHHHHHHhhccCCCCCCC---HHHHHHHHHH
Q psy5539 589 QPYYGLTHEEVVKYIKEG-NILQAP--DNTPDALYDLMKLCWNMKPMNRPS---FRTIYQTLWN 646 (653)
Q Consensus 589 ~p~~~~~~~e~~~~i~~~-~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs---~~eil~~L~~ 646 (653)
.||+..+.-+....|.+. +.+.+| ..++.+.++||...+. +|+.|.. +++|..|++.
T Consensus 279 TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF 341 (1317)
T KOG0612|consen 279 TPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFF 341 (1317)
T ss_pred CcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccc
Confidence 699888877777777654 345666 3589999999999887 5778877 9999999864
No 378
>KOG1006|consensus
Probab=100.00 E-value=2.6e-34 Score=277.68 Aligned_cols=261 Identities=22% Similarity=0.323 Sum_probs=209.2
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhh-CCCCccceEEeEEe
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE-FDHPNIVKLLGVCA 438 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~-l~HpnIv~l~g~~~ 438 (653)
.++..++++-+..||.|+||+|+|-.+ ...++.+|||+++....+..++++..|.+...+ -+.||||+++|.+.
T Consensus 59 ~~F~~~~Lqdlg~iG~G~fG~V~KM~h-----k~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F 133 (361)
T KOG1006|consen 59 HTFTSDNLQDLGEIGNGAFGTVNKMLH-----KPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALF 133 (361)
T ss_pred cccccchHHHHHHhcCCcchhhhhhhc-----CccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhh
Confidence 466677778888899999999999775 457899999999988777778888888876554 47899999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCceecCCCCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKFVHRDLATR 517 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~ivHrDLkp~ 517 (653)
.++..|+-||.|. .+|..+-+... ......+++..+-+|..-.+.||.||-+ .+|||||+||+
T Consensus 134 ~EGdcWiCMELMd-~SlDklYk~vy---------------~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPS 197 (361)
T KOG1006|consen 134 SEGDCWICMELMD-ISLDKLYKRVY---------------SVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPS 197 (361)
T ss_pred cCCceeeeHHHHh-hhHHHHHHHHH---------------HHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChh
Confidence 9999999999995 47776654211 1233568888888999999999999985 48999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC--CCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
||||+..|.+||+|||++..+... ...+..+|-..|||||.+... .|+.+|||||||++|+|+.||.. ||.+.+
T Consensus 198 NILldr~G~vKLCDFGIcGqLv~S---iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~f-Pyr~w~ 273 (361)
T KOG1006|consen 198 NILLDRHGDVKLCDFGICGQLVDS---IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNF-PYRKWD 273 (361)
T ss_pred heEEecCCCEeeecccchHhHHHH---HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCC-CcchHH
Confidence 999999999999999998654211 233556777789999999754 48999999999999999999665 887654
Q ss_pred H-HHHHHHHHcCCcc--CCCC---CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 596 H-EEVVKYIKEGNIL--QAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 596 ~-~e~~~~i~~~~~~--~~~~---~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
. .|.+..+..|..+ ..+. +.+..+..++..|+.+|-+.||++.+++++.+
T Consensus 274 svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~f 329 (361)
T KOG1006|consen 274 SVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPF 329 (361)
T ss_pred HHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCch
Confidence 3 3444455555432 2222 36788999999999999999999999988765
No 379
>KOG0696|consensus
Probab=100.00 E-value=7.5e-33 Score=280.88 Aligned_cols=247 Identities=26% Similarity=0.388 Sum_probs=208.6
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHH--HHHHHHHHHHHHhhC-CCCccceEEeEE
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY--LQTDFEREACLLAEF-DHPNIVKLLGVC 437 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~--~~~~f~~Ei~il~~l-~HpnIv~l~g~~ 437 (653)
.+...+|.++..||+|+||+|-+|.-+| +...+|||+++.+.--+ ..+--..|-++|+.. +-|.++.+...+
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkg-----tdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF 419 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKG-----TDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF 419 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccC-----cchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh
Confidence 4556789999999999999999998544 55789999998753211 011123455666655 578999999999
Q ss_pred ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
..-+.+++||||+.+|||--.+++ .+.+.+..+..+|..||-||-|||++||+.||||.+
T Consensus 420 QTmDRLyFVMEyvnGGDLMyhiQQ--------------------~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLD 479 (683)
T KOG0696|consen 420 QTMDRLYFVMEYVNGGDLMYHIQQ--------------------VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLD 479 (683)
T ss_pred hhhhheeeEEEEecCchhhhHHHH--------------------hcccCCchhhhhhHHHHHHhhhhhcCCeeeeecccc
Confidence 999999999999999999888863 345777888999999999999999999999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
|||+|.+|.+||+|||+++.-...+ .+.....||+.|+|||.+.+..|....|.|||||+||||+. |.+||.+.+.+
T Consensus 480 NvmLd~eGHiKi~DFGmcKEni~~~--~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmla-GQpPFdGeDE~ 556 (683)
T KOG0696|consen 480 NVMLDSEGHIKIADFGMCKENIFDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQPPFDGEDED 556 (683)
T ss_pred ceEeccCCceEeeecccccccccCC--cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHc-CCCCCCCCCHH
Confidence 9999999999999999997643322 23345678999999999999999999999999999999998 66799999999
Q ss_pred HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC
Q psy5539 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS 636 (653)
Q Consensus 598 e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 636 (653)
++++.|.+.+. ..|...+.+..++.+..+.+.|.+|..
T Consensus 557 elF~aI~ehnv-syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 557 ELFQAIMEHNV-SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred HHHHHHHHccC-cCcccccHHHHHHHHHHhhcCCccccC
Confidence 99999999874 578889999999999999999999973
No 380
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.1e-31 Score=269.14 Aligned_cols=240 Identities=30% Similarity=0.417 Sum_probs=201.8
Q ss_pred CCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeecCCCChH
Q psy5539 377 AFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLN 456 (653)
Q Consensus 377 ~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~~~gsL~ 456 (653)
+||.||+|...+ ++..+++|++.........+.+.+|++.+++++|+||+++++.+......++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKK-----TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECC-----CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHH
Confidence 589999998742 467899999976544332578999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCccc
Q psy5539 457 DFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536 (653)
Q Consensus 457 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~ 536 (653)
+++... ..+++..++.++.+++.+|.+||+.+++|+||+|+||++++++.++|+|||.+.
T Consensus 76 ~~~~~~--------------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~ 135 (244)
T smart00220 76 DLLKKR--------------------GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLAR 135 (244)
T ss_pred HHHHhc--------------------cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEcccccee
Confidence 998621 227889999999999999999999999999999999999999999999999997
Q ss_pred cccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCC-CCHHHHHHHHHcCCccCCCCC-
Q psy5539 537 KMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG-LTHEEVVKYIKEGNILQAPDN- 614 (653)
Q Consensus 537 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~-~~~~e~~~~i~~~~~~~~~~~- 614 (653)
...... ......++..|++||.+....++.++||||||+++++|+++. .||.. .....+.+.+..+........
T Consensus 136 ~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (244)
T smart00220 136 QLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGK-PPFPGDDQLLELFKKIGKPKPPFPPPEW 211 (244)
T ss_pred eecccc---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCC-CCCCCCCcHHHHHHHHhccCCCCccccc
Confidence 654332 223345677899999999889999999999999999999955 58876 666667777666554333322
Q ss_pred -CcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 615 -TPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 615 -~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
.+.++.+++.+||..+|++||++.+++++.+
T Consensus 212 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~ 243 (244)
T smart00220 212 KISPEAKDLIRKLLVKDPEKRLTAEEALQHPF 243 (244)
T ss_pred cCCHHHHHHHHHHccCCchhccCHHHHhhCCC
Confidence 8899999999999999999999999998643
No 381
>KOG4250|consensus
Probab=99.98 E-value=2.9e-32 Score=294.89 Aligned_cols=256 Identities=27% Similarity=0.426 Sum_probs=197.4
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC------
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG------ 440 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~------ 440 (653)
+...+.||+||||.||+|+. .++|..||||.++........+..-+|+++|++|+|+|||+++++-...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrn-----ketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~ 89 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRN-----KETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVT 89 (732)
T ss_pred eeehhhhcCCccceeeeecc-----cccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccc
Confidence 44556799999999999984 4688999999999876666677788999999999999999999985443
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
....+||||+++|||...|++ | .+...|++.+++.++.++..||.|||++||+||||||.||+
T Consensus 90 ~~~vlvmEyC~gGsL~~~L~~--P---------------EN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIv 152 (732)
T KOG4250|consen 90 RLPVLVMEYCSGGSLRKVLNS--P---------------ENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIV 152 (732)
T ss_pred ccceEEEeecCCCcHHHHhcC--c---------------ccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Confidence 457899999999999999972 2 23456999999999999999999999999999999999999
Q ss_pred Ec--CCC--cEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCC---
Q psy5539 521 IN--DQM--VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYY--- 592 (653)
Q Consensus 521 l~--~~~--~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~--- 592 (653)
+- ++| .-||+|||.|+.+..+. .-....||..|.+||.... ..|+...|.|||||++||..||.+ ||-
T Consensus 153 l~~Gedgq~IyKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~l-PF~p~~ 228 (732)
T KOG4250|consen 153 LQIGEDGQSIYKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGEL-PFIPFG 228 (732)
T ss_pred EeecCCCceEEeeecccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCC-CCCcCC
Confidence 84 333 56999999999874433 3355689999999999984 889999999999999999999776 553
Q ss_pred CC-CHHHHHHHHHcCCc--------------------cCCCCCCc----HHHHHHHHHhhccCCCCCC--CHHHHHHHHH
Q psy5539 593 GL-THEEVVKYIKEGNI--------------------LQAPDNTP----DALYDLMKLCWNMKPMNRP--SFRTIYQTLW 645 (653)
Q Consensus 593 ~~-~~~e~~~~i~~~~~--------------------~~~~~~~~----~~l~~li~~cl~~dP~~RP--s~~eil~~L~ 645 (653)
+. +..+++..+..++. ++.|...+ ..+-..+..++..+|.+|- .+.+....+.
T Consensus 229 ~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~ 308 (732)
T KOG4250|consen 229 GPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVD 308 (732)
T ss_pred CccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHH
Confidence 22 22334433332111 12222222 3445566678888888888 6665555555
Q ss_pred HHH
Q psy5539 646 NIK 648 (653)
Q Consensus 646 ~l~ 648 (653)
.+.
T Consensus 309 dIL 311 (732)
T KOG4250|consen 309 DIL 311 (732)
T ss_pred HHH
Confidence 443
No 382
>KOG0604|consensus
Probab=99.98 E-value=1.1e-32 Score=270.25 Aligned_cols=252 Identities=22% Similarity=0.340 Sum_probs=205.2
Q ss_pred CCCeeEE-eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEec--
Q psy5539 364 RNDIIYV-RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAV-- 439 (653)
Q Consensus 364 ~~~~~~~-~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~-- 439 (653)
+++|.+. +.||-|-.|+|-.+.. +.++..+|+|++.+.. ..++|+++--.. .|||||.++++++.
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~-----k~T~ekfALKvL~Ds~------KARrEVeLHw~~s~h~~iV~IidVyeNs~ 128 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVH-----KRTQEKFALKVLLDSP------KARREVELHWMASGHPHIVSIIDVYENSY 128 (400)
T ss_pred hhhheehhhhhccccCCceEEEEe-----ccchhhhHHHHHhcCH------HHHhHhhhhhhhcCCCceEEeehhhhhhc
Confidence 3455553 4699999999999875 3567889999997532 346788764444 69999999999854
Q ss_pred --CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 440 --GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 440 --~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
..-+.+|||.|+||+|...++.. ....+++.++..|.+||..|+.|||+.+|.||||||+
T Consensus 129 ~~rkcLLiVmE~meGGeLfsriq~~------------------g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpE 190 (400)
T KOG0604|consen 129 QGRKCLLIVMECMEGGELFSRIQDR------------------GDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPE 190 (400)
T ss_pred cCceeeEeeeecccchHHHHHHHHc------------------ccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChh
Confidence 45688999999999999988732 3467999999999999999999999999999999999
Q ss_pred CEeEc---CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539 518 NCLIN---DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594 (653)
Q Consensus 518 NILl~---~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~ 594 (653)
|+|.. .|-.+||+|||.|+.-.... .-....-|+.|.|||++...+|+...|+||+||++|-|++ |.+||+..
T Consensus 191 NLLyt~t~~na~lKLtDfGFAK~t~~~~---~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLC-GyPPFYS~ 266 (400)
T KOG0604|consen 191 NLLYTTTSPNAPLKLTDFGFAKETQEPG---DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-GYPPFYSN 266 (400)
T ss_pred heeeecCCCCcceEecccccccccCCCc---cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhc-CCCccccc
Confidence 99996 45689999999998643211 1233455789999999999999999999999999999998 67888865
Q ss_pred C----HHHHHHHHHcCCccCCCC---CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 595 T----HEEVVKYIKEGNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 595 ~----~~e~~~~i~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
. ...+..+|+.|+.....+ .++++.+++|+.+|..+|++|.|+++++.+.|-.+
T Consensus 267 hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 267 HGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred CCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 4 345778889988643332 36788999999999999999999999999988654
No 383
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.98 E-value=1.9e-31 Score=300.80 Aligned_cols=278 Identities=16% Similarity=0.174 Sum_probs=176.4
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeE---
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGV--- 436 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~--- 436 (653)
..+..++|.+.+.||+|+||.||+|++.... ...+..||||+++...... .+..| .+....+.+++.++..
T Consensus 127 ~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~-~~~~~~vAvK~~~~~~~~e---~~~~e--~l~~~~~~~~~~~~~~~~~ 200 (566)
T PLN03225 127 PSFKKDDFVLGKKLGEGAFGVVYKASLVNKQ-SKKEGKYVLKKATEYGAVE---IWMNE--RVRRACPNSCADFVYGFLE 200 (566)
T ss_pred CCCccCCeEEeEEEeeCCCeEEEEEEEcCCc-cccCcEEEEEEecccchhH---HHHHH--HHHhhchhhHHHHHHhhhc
Confidence 3556789999999999999999999975321 1236789999886432211 11111 1222223333322221
Q ss_pred ---EecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecC
Q psy5539 437 ---CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRD 513 (653)
Q Consensus 437 ---~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrD 513 (653)
...+...+||+||+++++|.++++.............................+..++.||+.||+|||+++|+|||
T Consensus 201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD 280 (566)
T PLN03225 201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD 280 (566)
T ss_pred ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence 24567899999999999999999743210000000000000001112233455678999999999999999999999
Q ss_pred CCCCCEeEcC-CCcEEEeccCccccccccccccCCCCCCCccccccchhhccC----------------------CCCCc
Q psy5539 514 LATRNCLIND-QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN----------------------KYTVE 570 (653)
Q Consensus 514 Lkp~NILl~~-~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~----------------------~~t~k 570 (653)
|||+|||+++ ++.+||+|||+|+.+.....+ ......+++.|||||.+... .++.+
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 9999999985 689999999999765322221 22344668899999966432 24456
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc--------------------cCCCCCCcHHHHHHHHHhhccC
Q psy5539 571 SDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI--------------------LQAPDNTPDALYDLMKLCWNMK 630 (653)
Q Consensus 571 sDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~--------------------~~~~~~~~~~l~~li~~cl~~d 630 (653)
+|||||||+||||+++.. +.. .........+..... .+..+.......+|+.+|++.|
T Consensus 360 ~DVwSlGviL~el~~~~~-~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNL-RSD-SNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred cccHHHHHHHHHHHhCcC-CCc-hHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 799999999999998443 221 111111111111100 0011122344568999999999
Q ss_pred CCCCCCHHHHHHHHHH
Q psy5539 631 PMNRPSFRTIYQTLWN 646 (653)
Q Consensus 631 P~~RPs~~eil~~L~~ 646 (653)
|++|||++++++|+|-
T Consensus 438 P~kR~ta~e~L~Hpff 453 (566)
T PLN03225 438 GRQRISAKAALAHPYF 453 (566)
T ss_pred cccCCCHHHHhCCcCc
Confidence 9999999999999874
No 384
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.98 E-value=3.1e-31 Score=292.33 Aligned_cols=282 Identities=19% Similarity=0.182 Sum_probs=196.6
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCC-----------CCCccceEEEEEEccccccHHHHH--------------HH
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGL-----------LKHEEFTLVAVKMLKDEASEYLQT--------------DF 415 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~-----------~~~~~~~~VAVK~l~~~~~~~~~~--------------~f 415 (653)
.+..++|++.++||+|+||.||+|..... .....++.||||+++..... ..+ .+
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~-~~~~fl~e~~~~~~~~e~~ 219 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQG-VRQDFLKTGTLAKGSAETG 219 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchh-hHHHHHhhhhhhhcccchh
Confidence 45678999999999999999999975221 12234568999998754321 122 23
Q ss_pred HHHHHHHhhCCCCcc-----ceEEeEEec--------CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcc------ccc
Q psy5539 416 EREACLLAEFDHPNI-----VKLLGVCAV--------GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYS------SME 476 (653)
Q Consensus 416 ~~Ei~il~~l~HpnI-----v~l~g~~~~--------~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~------~~~ 476 (653)
..|+.++.+++|.++ +++++++.. .+..+|||||+++|+|.++|+...... ..... ...
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~--~~~L~e~l~~g~~l 297 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPF--PGCLEEFMMAGKKI 297 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCC--cchHHHHHhcCCch
Confidence 457777888877654 677777643 356899999999999999997432110 00000 000
Q ss_pred ccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCcccc
Q psy5539 477 SSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRW 556 (653)
Q Consensus 477 ~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y 556 (653)
........+++..+..++.|++.||.|||+.+|+||||||+|||++.++.+||+|||+++.+..... .......+++.|
T Consensus 298 ~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y 376 (507)
T PLN03224 298 PDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRY 376 (507)
T ss_pred hhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcce
Confidence 0011223568889999999999999999999999999999999999999999999999976532211 112223447899
Q ss_pred ccchhhccCCC----------------------CCchhHHHHHHHHHHHHhCCCCCCCCCCHH--H---------HHHHH
Q psy5539 557 MPLESILYNKY----------------------TVESDVWAFGVCLWEIFSFALQPYYGLTHE--E---------VVKYI 603 (653)
Q Consensus 557 ~aPE~~~~~~~----------------------t~ksDVwSlGvvl~ellt~~~~p~~~~~~~--e---------~~~~i 603 (653)
+|||.+..... ..+.||||+||+++||+++...|+.+.... + ....+
T Consensus 377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~ 456 (507)
T PLN03224 377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMY 456 (507)
T ss_pred eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhh
Confidence 99998764321 134799999999999999888787643211 1 01111
Q ss_pred HcCCc-cCCCCCCcHHHHHHHHHhhccCC---CCCCCHHHHHHHHHH
Q psy5539 604 KEGNI-LQAPDNTPDALYDLMKLCWNMKP---MNRPSFRTIYQTLWN 646 (653)
Q Consensus 604 ~~~~~-~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~eil~~L~~ 646 (653)
..... ....+..++...+|+.+++..+| .+|+|++|+++|.|-
T Consensus 457 ~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f 503 (507)
T PLN03224 457 KGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFF 503 (507)
T ss_pred cccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence 11111 22235578899999999999866 689999999999875
No 385
>KOG0603|consensus
Probab=99.97 E-value=4e-32 Score=291.72 Aligned_cols=243 Identities=24% Similarity=0.361 Sum_probs=201.7
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCc
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~ 442 (653)
.+.|.+...+|.|+|+.|-.+... .+.+..+||++..... +-.+|+.++... +||||+++.+++..+.+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~-----~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~ 390 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESS-----PTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDGKE 390 (612)
T ss_pred chhhccccccCCCCccceeeeecc-----ccccchhheecccccc-----ccccccchhhhhcCCCcceeecceecCCce
Confidence 566788888999999999988753 3557789999976522 235667555554 79999999999999999
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE-
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI- 521 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl- 521 (653)
.++|||.+.+|-|.+.+... . ....++..|+.+|+.++.|||++|+|||||||+|||+
T Consensus 391 ~~~v~e~l~g~ell~ri~~~--------------------~-~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~ 449 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSK--------------------P-EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD 449 (612)
T ss_pred eeeeehhccccHHHHHHHhc--------------------c-hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec
Confidence 99999999999888877511 1 2226778899999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH-EEVV 600 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~-~e~~ 600 (653)
++.++++|+|||.++..... -.....|..|.|||++....||+++|+||||++||+|++|. .||..... .++.
T Consensus 450 ~~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~-tp~~~~P~~~ei~ 523 (612)
T KOG0603|consen 450 GSAGHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGR-TLFAAHPAGIEIH 523 (612)
T ss_pred CCCCcEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCC-CccccCCchHHHH
Confidence 69999999999999865322 12346678899999999999999999999999999999955 57765544 4777
Q ss_pred HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
..+..+.. .+.++++.++|++.||+.||.+||++.++..+.|.
T Consensus 524 ~~i~~~~~---s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 524 TRIQMPKF---SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HhhcCCcc---ccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 77766643 37899999999999999999999999999999886
No 386
>KOG0587|consensus
Probab=99.97 E-value=1.1e-31 Score=295.17 Aligned_cols=260 Identities=22% Similarity=0.421 Sum_probs=213.8
Q ss_pred cccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeE
Q psy5539 358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGV 436 (653)
Q Consensus 358 ~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~ 436 (653)
..+..+.+.+++.+.||.|.+|.||+++. ..+++.+|+|++..... .+++.+.|.++++.+ +|||++.++|+
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~-----~~~~~~aa~kI~~~~~d--~deEiE~eynil~~~~~hpnv~~fyg~ 84 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRH-----VKTGQLAAIKIMDPTED--EEEEIELEYNMLKKYSHHPNVATFYGA 84 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEee-----eecCceeeeEeecCCcc--ccHHHHHHHHHHHhccCCCCcceEEEE
Confidence 34455677899999999999999999984 34667888888765433 456778889999888 69999999999
Q ss_pred Eec-----CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCcee
Q psy5539 437 CAV-----GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVH 511 (653)
Q Consensus 437 ~~~-----~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivH 511 (653)
+.. ++.+|||||||.+|+..|+++.. ....+.|..+..|++.++.||.+||...++|
T Consensus 85 ~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~------------------~g~rl~E~~IaYI~re~lrgl~HLH~nkviH 146 (953)
T KOG0587|consen 85 FIKKDPGNGDQLWLVMEFCGGGSVTDLVKNT------------------KGNRLKEEWIAYILREILRGLAHLHNNKVIH 146 (953)
T ss_pred EEEecCCCCCeEEEEeeccCCccHHHHHhhh------------------cccchhhHHHHHHHHHHHHHHHHHhhcceee
Confidence 853 57899999999999999999721 1467899999999999999999999999999
Q ss_pred cCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-----CCCCchhHHHHHHHHHHHHhC
Q psy5539 512 RDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-----KYTVESDVWAFGVCLWEIFSF 586 (653)
Q Consensus 512 rDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----~~t~ksDVwSlGvvl~ellt~ 586 (653)
||||-.|||+++++.||+.|||.+..+.+. ........||+.|||||++... .|+.++|+||||++..||.-
T Consensus 147 RDikG~NiLLT~e~~VKLvDFGvSaQldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIElad- 223 (953)
T KOG0587|consen 147 RDIKGQNVLLTENAEVKLVDFGVSAQLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAE- 223 (953)
T ss_pred ecccCceEEEeccCcEEEeeeeeeeeeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcC-
Confidence 999999999999999999999999765332 2334456789999999999754 57889999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 587 ALQPYYGLTHEEVVKYIKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 587 ~~~p~~~~~~~e~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
|.+|+.++-+-..+-.|..... +..|..++.++.++|..|+.+|..+||++.++++|.+
T Consensus 224 G~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpF 284 (953)
T KOG0587|consen 224 GAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPF 284 (953)
T ss_pred CCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCc
Confidence 5568887776554444433222 2235678899999999999999999999999998864
No 387
>KOG0669|consensus
Probab=99.97 E-value=5.9e-33 Score=266.13 Aligned_cols=258 Identities=25% Similarity=0.424 Sum_probs=199.5
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccc-cccHHHHHHHHHHHHHHhhCCCCccceEEeEEec----
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKD-EASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV---- 439 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~-~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~---- 439 (653)
+.|.-..+||+|.||.||+|+.. .+++.||+|.+-- +..+..-....+|+++|..|+|+|++.++..|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~-----n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp 91 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSK-----NTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP 91 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhc-----CccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCC
Confidence 34555677999999999999853 4667788886532 2233333456799999999999999999988743
Q ss_pred ----CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539 440 ----GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA 515 (653)
Q Consensus 440 ----~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk 515 (653)
...++|||.++++ ||...|. .....++..++.++..++..||.|+|...|+|||+|
T Consensus 92 ~~r~r~t~ylVf~~ceh-DLaGlLs-------------------n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmK 151 (376)
T KOG0669|consen 92 TNRDRATFYLVFDFCEH-DLAGLLS-------------------NRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMK 151 (376)
T ss_pred cccccceeeeeHHHhhh-hHHHHhc-------------------CccccccHHHHHHHHHHHHHHHHHHHHhhHHhhccc
Confidence 3458999999987 8888774 223568889999999999999999999999999999
Q ss_pred CCCEeEcCCCcEEEeccCccccccccccccC--CCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCC
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKG--DENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYY 592 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~ 592 (653)
|.|+||+.+|.+||+|||+++.+...+.... -++...|..|.+||.+.+. .|+++.|||+-||++.||++ +.+-++
T Consensus 152 aaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwt-rspimq 230 (376)
T KOG0669|consen 152 AANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWT-RSPIMQ 230 (376)
T ss_pred HhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHc-cCcccc
Confidence 9999999999999999999976644332222 2355678999999998875 68999999999999999999 445677
Q ss_pred CCCHHHHHHHHHc--CCc-------------------cCCCC-------------CCcHHHHHHHHHhhccCCCCCCCHH
Q psy5539 593 GLTHEEVVKYIKE--GNI-------------------LQAPD-------------NTPDALYDLMKLCWNMKPMNRPSFR 638 (653)
Q Consensus 593 ~~~~~e~~~~i~~--~~~-------------------~~~~~-------------~~~~~l~~li~~cl~~dP~~RPs~~ 638 (653)
+.+.+..+..|.. |.+ .+.+. .-.++..+|+.+++..||.+|+.++
T Consensus 231 gnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad 310 (376)
T KOG0669|consen 231 GNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDAD 310 (376)
T ss_pred CChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchH
Confidence 7766655555432 111 00110 1134678999999999999999999
Q ss_pred HHHHHHHHHH
Q psy5539 639 TIYQTLWNIK 648 (653)
Q Consensus 639 eil~~L~~l~ 648 (653)
++++|.+..+
T Consensus 311 ~alnh~~F~k 320 (376)
T KOG0669|consen 311 QALNHDFFWK 320 (376)
T ss_pred hhhchhhhhc
Confidence 9998876543
No 388
>KOG0984|consensus
Probab=99.97 E-value=3.1e-31 Score=247.87 Aligned_cols=222 Identities=27% Similarity=0.392 Sum_probs=182.3
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhh-CCCCccceEEeEEe
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAE-FDHPNIVKLLGVCA 438 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~-l~HpnIv~l~g~~~ 438 (653)
++++.+++.-+..||+|++|.|-+-++. .+++..|+|+++.....+.++...+|+.+..+ ...|.+|.++|...
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~-----~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~ 115 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHI-----QSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF 115 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeec-----cCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh
Confidence 5788888888899999999999888753 57899999999887666777788888877555 57999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceecCCCCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATR 517 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-~ivHrDLkp~ 517 (653)
.....++.||.|+- +|..|-+.. ......+++..+-+|+..|+.||.|||++ .++|||+||+
T Consensus 116 regdvwIcME~M~t-Sldkfy~~v----------------~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPs 178 (282)
T KOG0984|consen 116 REGDVWICMELMDT-SLDKFYRKV----------------LKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPS 178 (282)
T ss_pred ccccEEEeHHHhhh-hHHHHHHHH----------------HhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcc
Confidence 99999999999954 888877632 34567789999999999999999999987 8999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC----CCCCchhHHHHHHHHHHHHhCCCCCCC-
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN----KYTVESDVWAFGVCLWEIFSFALQPYY- 592 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~----~~t~ksDVwSlGvvl~ellt~~~~p~~- 592 (653)
||||+..|+|||+|||++..+... ...+..+|--.|||||.+..+ .|+.+|||||||+++.||.++.. ||.
T Consensus 179 NiLIn~~GqVKiCDFGIsG~L~dS---iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~-PY~~ 254 (282)
T KOG0984|consen 179 NILINYDGQVKICDFGISGYLVDS---IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRF-PYES 254 (282)
T ss_pred eEEEccCCcEEEcccccceeehhh---hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccc-cccc
Confidence 999999999999999999755221 122335566679999988643 68999999999999999999665 664
Q ss_pred CCCHHHHHHHHHcCC
Q psy5539 593 GLTHEEVVKYIKEGN 607 (653)
Q Consensus 593 ~~~~~e~~~~i~~~~ 607 (653)
..++.+.+..+.+..
T Consensus 255 w~tpF~qLkqvVeep 269 (282)
T KOG0984|consen 255 WGTPFQQLKQVVEEP 269 (282)
T ss_pred cCCHHHHHHHHhcCC
Confidence 456666666665543
No 389
>KOG0614|consensus
Probab=99.97 E-value=8.1e-32 Score=279.76 Aligned_cols=257 Identities=23% Similarity=0.318 Sum_probs=220.4
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--ccHHHHHHHHHHHHHHhhCCCCccceEEeEEec
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV 439 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~ 439 (653)
+...+++.+..||-|+||.|=+++..+ ....+|+|.+++. .....++-+..|-.+|...+.|.||++|-.+.+
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~-----~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd 491 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNS-----QKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRD 491 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecc-----cchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhcc
Confidence 344567778889999999999998743 2225788887654 223345567789999999999999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
.+..||+||-+-||.|+..|+ +.+.++......++..+++|++|||+++||.|||||+|+
T Consensus 492 ~kyvYmLmEaClGGElWTiLr--------------------dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENl 551 (732)
T KOG0614|consen 492 SKYVYMLMEACLGGELWTILR--------------------DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENL 551 (732)
T ss_pred chhhhhhHHhhcCchhhhhhh--------------------hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhhe
Confidence 999999999999999999997 345678888899999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV 599 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~ 599 (653)
|+|.+|-+||.|||.|+.+..... .-...||+.|.|||.+.....+.+.|.||||++++||++ |.+||.+.++-..
T Consensus 552 lLd~~Gy~KLVDFGFAKki~~g~K---TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~-G~pPFs~~dpmkt 627 (732)
T KOG0614|consen 552 LLDNRGYLKLVDFGFAKKIGSGRK---TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLT-GSPPFSGVDPMKT 627 (732)
T ss_pred eeccCCceEEeehhhHHHhccCCc---eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHc-CCCCCCCCchHHH
Confidence 999999999999999998744332 234678999999999999999999999999999999999 6689999999888
Q ss_pred HHHHHcCC-ccCCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHHHHHH
Q psy5539 600 VKYIKEGN-ILQAPDNTPDALYDLMKLCWNMKPMNRPS-----FRTIYQTLWNI 647 (653)
Q Consensus 600 ~~~i~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~L~~l 647 (653)
...|..|- ....|..++....+||++.+..+|.+|.. +.+|.+|-|-.
T Consensus 628 Yn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~ 681 (732)
T KOG0614|consen 628 YNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFE 681 (732)
T ss_pred HHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhh
Confidence 88887764 35778889999999999999999999985 78899888754
No 390
>KOG4236|consensus
Probab=99.97 E-value=2.1e-31 Score=277.25 Aligned_cols=246 Identities=22% Similarity=0.365 Sum_probs=206.6
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEee
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEY 449 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey 449 (653)
+.||+|.||+||-|+. ..+|+.||||++.+.. .......+++|+.||..++||.||.|-..++..+..+.|||.
T Consensus 570 evLGSGQFG~VYgg~h-----RktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEK 644 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKH-----RKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEK 644 (888)
T ss_pred hhccCCcceeeeccee-----cccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehh
Confidence 4699999999999875 4678999999986542 233446789999999999999999999999999999999999
Q ss_pred cCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC---Cc
Q psy5539 450 MGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ---MV 526 (653)
Q Consensus 450 ~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~---~~ 526 (653)
+ +||..+.+- ....+.|++.....++.||+.||.|||.++|+|+||||+|||+.+. -.
T Consensus 645 l-~GDMLEMIL------------------SsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQ 705 (888)
T KOG4236|consen 645 L-HGDMLEMIL------------------SSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQ 705 (888)
T ss_pred h-cchHHHHHH------------------HhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCc
Confidence 8 567777663 2345678999999999999999999999999999999999999643 58
Q ss_pred EEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Q psy5539 527 VKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEG 606 (653)
Q Consensus 527 vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~ 606 (653)
+||+|||.|+.+...... ....||+.|.|||++....|+..-|+||.||++|--++|.. ||. ..+++-+.|...
T Consensus 706 vKlCDFGfARiIgEksFR---rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTF-PFN--EdEdIndQIQNA 779 (888)
T KOG4236|consen 706 VKLCDFGFARIIGEKSFR---RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTF-PFN--EDEDINDQIQNA 779 (888)
T ss_pred eeeccccceeecchhhhh---hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccc-cCC--CccchhHHhhcc
Confidence 999999999987554432 34578999999999999999999999999999999999655 664 345677777777
Q ss_pred CccCCCC---CCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 607 NILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 607 ~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.++-.+. .++++..+||...++..-.+|.|.+.-+.|+|.
T Consensus 780 aFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wl 822 (888)
T KOG4236|consen 780 AFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWL 822 (888)
T ss_pred ccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhh
Confidence 6654443 477899999999999999999999998888763
No 391
>KOG1027|consensus
Probab=99.97 E-value=4.6e-31 Score=289.22 Aligned_cols=245 Identities=27% Similarity=0.338 Sum_probs=192.1
Q ss_pred EeeecccCCee-EEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEecCCceEEEE
Q psy5539 370 VRDLGQGAFGR-VFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVGKPMCLLF 447 (653)
Q Consensus 370 ~~~LG~G~fG~-Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~~~~~LV~ 447 (653)
.+.+|.|+.|+ ||+|.. +++.||||++-.+. .+...+||..|..- +|||||++++.-.+....|+..
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y-------e~R~VAVKrll~e~----~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY-------EGREVAVKRLLEEF----FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred HHHcccCCCCcEEEEEee-------CCceehHHHHhhHh----HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 34589999976 799986 44799999986543 33567899998887 6999999999999999999999
Q ss_pred eecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC----
Q psy5539 448 EYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND---- 523 (653)
Q Consensus 448 Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~---- 523 (653)
|.+.- +|.+++..... ..........+.+..|+++||++||+-+||||||||.||||+.
T Consensus 583 ELC~~-sL~dlie~~~~----------------d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~ 645 (903)
T KOG1027|consen 583 ELCAC-SLQDLIESSGL----------------DVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSAD 645 (903)
T ss_pred hHhhh-hHHHHHhcccc----------------chhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCC
Confidence 99965 99999984210 0111122456788899999999999999999999999999975
Q ss_pred -CCcEEEeccCccccccccc-cccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539 524 -QMVVKIADFGLSRKMYLQD-YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK 601 (653)
Q Consensus 524 -~~~vkI~DfGla~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~ 601 (653)
...++|+|||+++.+.... .+.......||-+|+|||.+....-+.+.||||||||+|+.++||..||.+.-..+ .
T Consensus 646 ~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~ 723 (903)
T KOG1027|consen 646 GTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--A 723 (903)
T ss_pred cceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--h
Confidence 2588999999999886443 23345567889999999999999999999999999999999999999997544332 1
Q ss_pred HHHcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 602 YIKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 602 ~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
.|..+.. .........+..+||.+|++++|..||++.+|+.|+
T Consensus 724 NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HP 768 (903)
T KOG1027|consen 724 NILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHP 768 (903)
T ss_pred hhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence 2233322 111111122789999999999999999999999886
No 392
>KOG1151|consensus
Probab=99.97 E-value=3.3e-31 Score=270.84 Aligned_cols=256 Identities=25% Similarity=0.382 Sum_probs=201.5
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--c----cHHHHHHHHHHHHHHhhCCCCccceEEe
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--A----SEYLQTDFEREACLLAEFDHPNIVKLLG 435 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~----~~~~~~~f~~Ei~il~~l~HpnIv~l~g 435 (653)
.-.++|.++..||+|||+.||+|.+ ..+.+.||||+-.-+ . .+...+-..+|.+|-+.|+||.||++|+
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFD-----l~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD 534 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFD-----LTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD 534 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcc-----cchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee
Confidence 3445677788899999999999985 346688999975422 1 1222334568999999999999999999
Q ss_pred EEe-cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC--Cceec
Q psy5539 436 VCA-VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR--KFVHR 512 (653)
Q Consensus 436 ~~~-~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~--~ivHr 512 (653)
++. +.+.+|-|+||++|.||.-||+++ ..+++.++..|+.||+.+|.||.+. +|||-
T Consensus 535 yfslDtdsFCTVLEYceGNDLDFYLKQh--------------------klmSEKEARSIiMQiVnAL~YLNEikpPIIHY 594 (775)
T KOG1151|consen 535 YFSLDTDSFCTVLEYCEGNDLDFYLKQH--------------------KLMSEKEARSIIMQIVNALKYLNEIKPPIIHY 594 (775)
T ss_pred eeeeccccceeeeeecCCCchhHHHHhh--------------------hhhhHHHHHHHHHHHHHHHHHHhccCCCeeee
Confidence 986 456889999999999999999843 3578999999999999999999965 79999
Q ss_pred CCCCCCEeEcC---CCcEEEeccCccccccccccc-----cCCCCCCCccccccchhhccC----CCCCchhHHHHHHHH
Q psy5539 513 DLATRNCLIND---QMVVKIADFGLSRKMYLQDYY-----KGDENDAIPVRWMPLESILYN----KYTVESDVWAFGVCL 580 (653)
Q Consensus 513 DLkp~NILl~~---~~~vkI~DfGla~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~----~~t~ksDVwSlGvvl 580 (653)
||||.|||+-+ -|.+||.||||++.+....+. ......+||..|.+||.+.-+ +.+.|.||||.|||+
T Consensus 595 DLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIF 674 (775)
T KOG1151|consen 595 DLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIF 674 (775)
T ss_pred ccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhh
Confidence 99999999954 478999999999988654443 234567899999999987644 678999999999999
Q ss_pred HHHHhCCCCCCCCC-CHHHHHHH---HHcCCccCCC--CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 581 WEIFSFALQPYYGL-THEEVVKY---IKEGNILQAP--DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 581 ~ellt~~~~p~~~~-~~~e~~~~---i~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
|+.+.|.. ||... +.+++++. +...+ ..+| +.++.+..++|++||+..-++|....++..+.
T Consensus 675 yQClYGrK-PFGhnqsQQdILqeNTIlkAtE-VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dp 742 (775)
T KOG1151|consen 675 YQCLYGRK-PFGHNQSQQDILQENTILKATE-VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDP 742 (775)
T ss_pred hhhhccCC-CCCCchhHHHHHhhhchhccee-ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCc
Confidence 99997555 77544 44555443 12222 2222 45789999999999999999999888876653
No 393
>KOG0671|consensus
Probab=99.97 E-value=5.3e-31 Score=266.94 Aligned_cols=254 Identities=22% Similarity=0.305 Sum_probs=198.4
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCC--C----ccceEE
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH--P----NIVKLL 434 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~H--p----nIv~l~ 434 (653)
..-.++|.++..+|+|.||+|-++.+. +.+..||||+++.- ....+...-|++++.++.+ | -+|.+.
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~-----~~~~~vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDR-----ETKEHVALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeec-----CCCceehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 344678999999999999999999864 33689999999853 3456677889999999942 2 467788
Q ss_pred eEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539 435 GVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL 514 (653)
Q Consensus 435 g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL 514 (653)
+++.-.++.|+|+|.+ |-++.+||+.+ +..+++...+..|+.|++++++|||+.+++|-||
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~N------------------~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDL 218 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKEN------------------NYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDL 218 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhccC------------------CccccchHHHHHHHHHHHHHHHHHHhcceeecCC
Confidence 8899999999999988 45999999722 3456888999999999999999999999999999
Q ss_pred CCCCEeEc--------------------CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHH
Q psy5539 515 ATRNCLIN--------------------DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVW 574 (653)
Q Consensus 515 kp~NILl~--------------------~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVw 574 (653)
||+|||+. .+..++|+|||.|+..... ......|-.|.|||++.+-.++..+|||
T Consensus 219 KPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvW 293 (415)
T KOG0671|consen 219 KPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVW 293 (415)
T ss_pred ChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCce
Confidence 99999982 1346899999999764221 1334557789999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHcCC-----------------ccC------------------------
Q psy5539 575 AFGVCLWEIFSFALQPYYGLTHEE---VVKYIKEGN-----------------ILQ------------------------ 610 (653)
Q Consensus 575 SlGvvl~ellt~~~~p~~~~~~~e---~~~~i~~~~-----------------~~~------------------------ 610 (653)
|+||||.|+++|.. .|+..+..| +++.|...- .+.
T Consensus 294 SiGCIL~ElytG~~-LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~ 372 (415)
T KOG0671|consen 294 SIGCILVELYTGET-LFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYM 372 (415)
T ss_pred eeeeEEEEeeccce-ecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHh
Confidence 99999999999665 555444333 333332100 000
Q ss_pred -CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 611 -APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 611 -~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
..+....++.+|+++||..||.+|+|+.|++.|++-
T Consensus 373 ~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF 409 (415)
T KOG0671|consen 373 LQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFF 409 (415)
T ss_pred ccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHh
Confidence 001123478999999999999999999999999874
No 394
>cd07459 CRD_TK_ROR_like Cysteine-rich domain of tyrosine kinase-like orphan receptors. The cysteine-rich domain (CRD) is an essential part of the tyrosine kinase-like orphan receptor (Ror) proteins, a conserved family of tyrosine kinases that function in various processes, including neuronal and skeletal development, cell polarity, and cell movement. Ror proteins are receptors of Wnt proteins, which are key players in a number of fundamental cellular processes in embryogenesis and postnatal development. In different cellular contexts, Ror proteins can either activate or repress transcription of Wnt target genes, and can modulate Wnt signaling by sequestering Wnt ligands. In addition, a number of Wnt-independent functions have been proposed for both Ror1 and Ror2.
Probab=99.96 E-value=7.1e-30 Score=231.94 Aligned_cols=132 Identities=27% Similarity=0.621 Sum_probs=115.6
Q ss_pred CccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHH--HHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCC
Q psy5539 33 GYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMA--LWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPM 110 (653)
Q Consensus 33 g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~--~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~ 110 (653)
|||++|+|.+|++||. +..|||++.. +++.++++|.++ +|++. ++||+.|++||+++||+|+||+|++....|.
T Consensus 1 G~C~~Y~G~vC~~~L~-~~~Vyv~~~~--~q~~~e~~l~~~~~~i~~~-~~ls~~C~~~a~~~lC~~~FP~C~~~~~~~~ 76 (135)
T cd07459 1 GYCQPYRGSVCAKYLG-NKSVYVTSKQ--TQEDIEEQLSAAFTVISTS-SDVSPKCQQYALPSLCYYAFPLCDEGSSTPK 76 (135)
T ss_pred CcCccccchhhHHhcC-CCeEEEeCCC--CHHHHHHHHHHHHHHHHhc-ccccHHHHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 8999999999999998 5679996653 355777788776 45555 7899999999999999999999999888899
Q ss_pred CCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCCCCCCCCCCcccCCCCcCCCCCC
Q psy5539 111 SLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELPNCDTLPKYEVVNGKPTCSHAQL 175 (653)
Q Consensus 111 ~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp~C~~lp~~~~~~~~~~C~~~~~ 175 (653)
|+++||++|+.++.++|.+||+++++++.+| +++.+|+|+.||..+. .+++.|+.+++
T Consensus 77 p~~iCre~C~~l~~~~C~~E~~~~~~~~~~g------~~~~lp~C~~LP~~~~-~~~~~C~~ig~ 134 (135)
T cd07459 77 PRRICRDECELLENDLCKKEYAIAKRHPLIG------HQLLLPDCSSLPSPGS-PESSNCIRLGI 134 (135)
T ss_pred CCcccHHHHHHHHHhHhHHHHHHHHhCcccC------CccCCCCccCCCCCCC-CCCCCCeecCC
Confidence 9999999999999999999999999999877 6789999999998873 57889988765
No 395
>KOG0695|consensus
Probab=99.96 E-value=3.3e-29 Score=248.53 Aligned_cols=256 Identities=20% Similarity=0.336 Sum_probs=206.7
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhC-CCCccceEEeE
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEF-DHPNIVKLLGV 436 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~ 436 (653)
..+..++|.+++.||+|+|++|.++++. .+.+.+|+|+++++. .....+-.+.|-.+.... +||.+|.|...
T Consensus 245 ~~l~l~df~ll~vigrgsyakvl~~~~~-----~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc 319 (593)
T KOG0695|consen 245 QGLGLQDFDLLRVIGRGSYAKVLLVRLK-----KTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC 319 (593)
T ss_pred cccccccceeeeeecCcchhhhhheehc-----ccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh
Confidence 4556789999999999999999999864 456899999998652 112233455666665554 79999999999
Q ss_pred EecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 437 CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 437 ~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
+..+..+++|.||+++|+|--+++ ....++++.+..+...|..+|.|||++||+.||||.
T Consensus 320 fqtesrlffvieyv~ggdlmfhmq--------------------rqrklpeeharfys~ei~lal~flh~rgiiyrdlkl 379 (593)
T KOG0695|consen 320 FQTESRLFFVIEYVNGGDLMFHMQ--------------------RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKL 379 (593)
T ss_pred hcccceEEEEEEEecCcceeeehh--------------------hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccc
Confidence 999999999999999999976664 345789999999999999999999999999999999
Q ss_pred CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCC--C-
Q psy5539 517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY--G- 593 (653)
Q Consensus 517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~--~- 593 (653)
+|||+|..|.+||.|+|+.+...... .......||+.|.|||.+.+..|....|.|+|||+++||+.|. .||. +
T Consensus 380 dnvlldaeghikltdygmcke~l~~g--d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagr-spfdivgm 456 (593)
T KOG0695|consen 380 DNVLLDAEGHIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGR-SPFDIVGM 456 (593)
T ss_pred cceEEccCCceeecccchhhcCCCCC--cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCC-CCcceecC
Confidence 99999999999999999997643222 2335567899999999999999999999999999999999855 4774 2
Q ss_pred ----CCHHH-HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC------CHHHHHHHH
Q psy5539 594 ----LTHEE-VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP------SFRTIYQTL 644 (653)
Q Consensus 594 ----~~~~e-~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP------s~~eil~~L 644 (653)
++.++ +++.|.+.++ ..|...+-....+++.-+++||.+|. .++++..|.
T Consensus 457 ~n~d~ntedylfqvilekqi-riprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ 517 (593)
T KOG0695|consen 457 DNPDMNTEDYLFQVILEKQI-RIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHA 517 (593)
T ss_pred CCcccchhHHHHHHHhhhcc-cccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcch
Confidence 23333 5566666553 56777777788899999999999986 456666554
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=5.1e-28 Score=236.06 Aligned_cols=213 Identities=36% Similarity=0.562 Sum_probs=183.7
Q ss_pred ecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeecCC
Q psy5539 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGR 452 (653)
Q Consensus 373 LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~~~ 452 (653)
||+|++|.||+++..+ .+..+++|.+.........+.+.+|+..++.++|++|+++++++......++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~-----~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKK-----TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecC-----CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCC
Confidence 6899999999998642 46789999998665433456799999999999999999999999998999999999999
Q ss_pred CChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC-CCcEEEec
Q psy5539 453 GDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND-QMVVKIAD 531 (653)
Q Consensus 453 gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~-~~~vkI~D 531 (653)
++|.+++... ...++...+..++.+++++|.+||+.+++|+||+|.||++++ ++.++|+|
T Consensus 76 ~~l~~~~~~~-------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d 136 (215)
T cd00180 76 GSLKDLLKEN-------------------EGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLAD 136 (215)
T ss_pred CcHHHHHHhc-------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEec
Confidence 9999998621 135789999999999999999999999999999999999999 89999999
Q ss_pred cCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccC
Q psy5539 532 FGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQ 610 (653)
Q Consensus 532 fGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~ 610 (653)
||.+........ ..........|++||.+... ..+.++|+|++|+++++|
T Consensus 137 ~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------- 187 (215)
T cd00180 137 FGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------- 187 (215)
T ss_pred CCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------
Confidence 999976532211 12334566789999999887 889999999999999998
Q ss_pred CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 611 APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 611 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
..+.+++..|++.+|++||++.++++++
T Consensus 188 ------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 6789999999999999999999998754
No 397
>KOG0608|consensus
Probab=99.96 E-value=3.2e-29 Score=265.84 Aligned_cols=258 Identities=21% Similarity=0.302 Sum_probs=200.1
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEe
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCA 438 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~ 438 (653)
.....-|..++.||-|+||.|.+++- ..+...+|.|.+++.. ......-++.|-.||+.-+.+=||+||-.|.
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~K-----vDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ 699 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRK-----VDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ 699 (1034)
T ss_pred hccccceEEEeeecccccceeEEEee-----cchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec
Confidence 34566788899999999999999973 3346789999997542 1223344678999999999999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN 518 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N 518 (653)
+++.+|+||||++|||+-.+|- ..+-+.+..+..++.+++.++++.|..|+|||||||+|
T Consensus 700 DkdnLYFVMdYIPGGDmMSLLI--------------------rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDN 759 (1034)
T KOG0608|consen 700 DKDNLYFVMDYIPGGDMMSLLI--------------------RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDN 759 (1034)
T ss_pred cCCceEEEEeccCCccHHHHHH--------------------HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccc
Confidence 9999999999999999999886 23557888889999999999999999999999999999
Q ss_pred EeEcCCCcEEEeccCcccccc--------c-ccccc-------------------------------CCCCCCCcccccc
Q psy5539 519 CLINDQMVVKIADFGLSRKMY--------L-QDYYK-------------------------------GDENDAIPVRWMP 558 (653)
Q Consensus 519 ILl~~~~~vkI~DfGla~~~~--------~-~~~~~-------------------------------~~~~~~~t~~y~a 558 (653)
||||.+|.+||.||||..-+. . .+... ......||..|+|
T Consensus 760 ILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyia 839 (1034)
T KOG0608|consen 760 ILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIA 839 (1034)
T ss_pred eEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccC
Confidence 999999999999999975331 0 00000 0112347889999
Q ss_pred chhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCccCCC--CCCcHHHHHHHHHhhccCCCCCC
Q psy5539 559 LESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK-EGNILQAP--DNTPDALYDLMKLCWNMKPMNRP 635 (653)
Q Consensus 559 PE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~-~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RP 635 (653)
||++....++.-.|.||.||||+||+- |.+||...++.+...+|. -...+.++ .+++.+..+||.+++. +++.|.
T Consensus 840 pevl~r~g~~q~cdwws~gvil~em~~-g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RL 917 (1034)
T KOG0608|consen 840 PEVLARTGYTQLCDWWSVGVILYEMLV-GQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRL 917 (1034)
T ss_pred hHHhcccCccccchhhHhhHHHHHHhh-CCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Chhhhh
Confidence 999999999999999999999999997 567888776655433332 22334443 4678888888887544 456665
Q ss_pred ---CHHHHHHHHH
Q psy5539 636 ---SFRTIYQTLW 645 (653)
Q Consensus 636 ---s~~eil~~L~ 645 (653)
..++|..|.|
T Consensus 918 Gkng~d~vKaHpf 930 (1034)
T KOG0608|consen 918 GKNGADQVKAHPF 930 (1034)
T ss_pred cccchhhhhcCcc
Confidence 4455665543
No 398
>KOG0664|consensus
Probab=99.96 E-value=6e-30 Score=247.81 Aligned_cols=248 Identities=25% Similarity=0.389 Sum_probs=187.9
Q ss_pred EeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC-----Cce
Q psy5539 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG-----KPM 443 (653)
Q Consensus 370 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~-----~~~ 443 (653)
-+.||-|+||.||.++++ ++++.||.|++..-. +-..-+.+.+|+++|..++|.|++..++...-. .+.
T Consensus 58 DRPIGYGAFGVVWsVTDP-----RdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDP-----RSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred CCcccccceeEEEeccCC-----CCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 356899999999999865 578899999886432 223345788999999999999999999886543 356
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
|.|.|.|.. ||++.+. ....++...+.-++.||++||.|||+.+|.||||||.|.|++.
T Consensus 133 YV~TELmQS-DLHKIIV--------------------SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS 191 (449)
T KOG0664|consen 133 YVLTELMQS-DLHKIIV--------------------SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS 191 (449)
T ss_pred HHHHHHHHh-hhhheec--------------------cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc
Confidence 778888854 7776654 3456777778888999999999999999999999999999999
Q ss_pred CCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539 524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY 602 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~ 602 (653)
|..+||+|||+++.-.. +.....+....|-.|.|||.+.+. .|+.+.||||.||++.||+. ..-.|+..++-+.++.
T Consensus 192 NCvLKICDFGLARvee~-d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLg-RrILFQAq~PiqQL~l 269 (449)
T KOG0664|consen 192 NCILKICDFGLARTWDQ-RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQ-RKILFQAAGPIEQLQM 269 (449)
T ss_pred CceEEecccccccccch-hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHh-hhhhhhccChHHHHHH
Confidence 99999999999986432 222333445567789999999876 68999999999999999995 4446665554433333
Q ss_pred HHc---------------CCc-------cCC-----------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 603 IKE---------------GNI-------LQA-----------PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 603 i~~---------------~~~-------~~~-----------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
|.+ |.. ... ++.-..+...+..+++..+|+.|.+..+.+.++.
T Consensus 270 ItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 270 IIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred HHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 322 110 011 1223356778888999999999999998887764
No 399
>KOG0668|consensus
Probab=99.95 E-value=1.4e-28 Score=233.14 Aligned_cols=247 Identities=20% Similarity=0.349 Sum_probs=191.4
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeEEec--C
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGVCAV--G 440 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~--~ 440 (653)
.++|++++++|+|.|+.||.|... .+...++||++++-. .+.+.+|+.+|..|+ ||||++|+++..+ .
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~-----~~~eK~ViKiLKPVk----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~S 107 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINI-----TNNEKCVIKILKPVK----KKKIKREIKILQNLRGGPNIIKLLDIVKDPES 107 (338)
T ss_pred cchHHHHHHHcCccHhhHhccccc-----CCCceEEEeeechHH----HHHHHHHHHHHHhccCCCCeeehhhhhcCccc
Confidence 357899999999999999999742 345679999998642 346889999999997 9999999999865 4
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
....||+||+.+.|..... +.++..++..++.++++||.|+|++||.|||+||.|++
T Consensus 108 ktpaLiFE~v~n~Dfk~ly-----------------------~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvm 164 (338)
T KOG0668|consen 108 KTPSLIFEYVNNTDFKQLY-----------------------PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVM 164 (338)
T ss_pred cCchhHhhhhccccHHHHh-----------------------hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceee
Confidence 5678999999998776654 45788899999999999999999999999999999999
Q ss_pred EcC-CCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 521 IND-QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 521 l~~-~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
||. ...++|+|+|||........+ .....+-.|.-||.+.. ..|+..-|+|||||+|..|+-.+.+.|.|.+..+
T Consensus 165 Idh~~rkLrlIDWGLAEFYHp~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D 241 (338)
T KOG0668|consen 165 IDHELRKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 241 (338)
T ss_pred echhhceeeeeecchHhhcCCCcee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHH
Confidence 995 468999999999765332221 12233445788998764 5688999999999999999986666666655433
Q ss_pred HH-------------HHHHcCCc-------------cCC-------C---CCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy5539 599 VV-------------KYIKEGNI-------------LQA-------P---DNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642 (653)
Q Consensus 599 ~~-------------~~i~~~~~-------------~~~-------~---~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 642 (653)
.+ ..+..=++ ... + ...+++..+|+.+.+..|-.+|||++|.+.
T Consensus 242 QLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 242 QLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 21 22211000 000 0 124588999999999999999999999998
Q ss_pred HHH
Q psy5539 643 TLW 645 (653)
Q Consensus 643 ~L~ 645 (653)
|+.
T Consensus 322 Hpy 324 (338)
T KOG0668|consen 322 HPY 324 (338)
T ss_pred Cch
Confidence 875
No 400
>KOG1152|consensus
Probab=99.95 E-value=1.7e-28 Score=258.85 Aligned_cols=199 Identities=29% Similarity=0.387 Sum_probs=166.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHH-----HHHHHHHHHhhCC---CCccceEE
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQT-----DFEREACLLAEFD---HPNIVKLL 434 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~-----~f~~Ei~il~~l~---HpnIv~l~ 434 (653)
.+|..++.||+|+||.|++|.++ +....|+||++.++.- ..+.+ .+--||.||+.++ |+||++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K-----~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHK-----ENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLL 635 (772)
T ss_pred ccceeeeeccccccceEEEeeec-----ccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhh
Confidence 35788899999999999999874 3468899999976521 11111 2457999999998 99999999
Q ss_pred eEEecCCceEEEEeec-CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecC
Q psy5539 435 GVCAVGKPMCLLFEYM-GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRD 513 (653)
Q Consensus 435 g~~~~~~~~~LV~Ey~-~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrD 513 (653)
++|++++.++|+||-. ++.||.+|+. ..+.+++.++..|++||+.|+++||+.+|||||
T Consensus 636 dfFEddd~yyl~te~hg~gIDLFd~IE--------------------~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrd 695 (772)
T KOG1152|consen 636 DFFEDDDYYYLETEVHGEGIDLFDFIE--------------------FKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRD 695 (772)
T ss_pred heeecCCeeEEEecCCCCCcchhhhhh--------------------ccCccchHHHHHHHHHHHhccccccccCceecc
Confidence 9999999999999975 4679999986 235689999999999999999999999999999
Q ss_pred CCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCC-CCchhHHHHHHHHHHHHhCCCCCCC
Q psy5539 514 LATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKY-TVESDVWAFGVCLWEIFSFALQPYY 592 (653)
Q Consensus 514 Lkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-t~ksDVwSlGvvl~ellt~~~~p~~ 592 (653)
||-+||.++.+|.+||+|||.|....+ .+-....||+.|.|||++.+.+| ...-|||++|++||-++. +..||+
T Consensus 696 ikdenvivd~~g~~klidfgsaa~~ks----gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivy-kenpyy 770 (772)
T KOG1152|consen 696 IKDENVIVDSNGFVKLIDFGSAAYTKS----GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVY-KENPYY 770 (772)
T ss_pred cccccEEEecCCeEEEeeccchhhhcC----CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEe-ccCCCc
Confidence 999999999999999999999865321 12234678999999999999987 577899999999999885 666876
Q ss_pred C
Q psy5539 593 G 593 (653)
Q Consensus 593 ~ 593 (653)
.
T Consensus 771 n 771 (772)
T KOG1152|consen 771 N 771 (772)
T ss_pred C
Confidence 4
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=1.9e-26 Score=229.00 Aligned_cols=216 Identities=34% Similarity=0.466 Sum_probs=178.3
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEE
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLL 446 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV 446 (653)
|.+.+.||+|++|.||++...+ ++..+++|.+.........+.+.+|++.+++++|+|++++++++......+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~-----~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKG-----TGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcC-----CCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEE
Confidence 3567889999999999998642 45789999998654433466889999999999999999999999999999999
Q ss_pred EeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCC-CCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC
Q psy5539 447 FEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ-LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM 525 (653)
Q Consensus 447 ~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~ 525 (653)
+||+++++|.+++... .. +++.....++.+++.++.+||+.+++|+||+|+||+++.++
T Consensus 76 ~e~~~~~~L~~~~~~~--------------------~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~ 135 (225)
T smart00221 76 MEYCEGGDLFDYLRKK--------------------GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDG 135 (225)
T ss_pred EeccCCCCHHHHHHhc--------------------ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 9999999999998621 12 78889999999999999999999999999999999999999
Q ss_pred cEEEeccCccccccccccccCCCCCCCccccccchhh-ccCCCCCchhHHHHHHHHHHHHhCCCCCCCC--CCHHHHHHH
Q psy5539 526 VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESI-LYNKYTVESDVWAFGVCLWEIFSFALQPYYG--LTHEEVVKY 602 (653)
Q Consensus 526 ~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~--~~~~e~~~~ 602 (653)
.++|+|||++........ .......++..|++||.. ....++.++|||+||++++||++ +..||.. ....++.+.
T Consensus 136 ~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~-g~~pf~~~~~~~~~~~~~ 213 (225)
T smart00221 136 LVKLADFGLARFIHRDLA-ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLW-GPEPFSGEGEFTSLLSDV 213 (225)
T ss_pred CEEEeeCceeeEecCccc-ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHH-CCCCccccchhHHHHHHH
Confidence 999999999876533210 011234456789999998 66778889999999999999999 5668877 344577788
Q ss_pred HHcCCcc
Q psy5539 603 IKEGNIL 609 (653)
Q Consensus 603 i~~~~~~ 609 (653)
+..+...
T Consensus 214 ~~~~~~~ 220 (225)
T smart00221 214 WSFGVPL 220 (225)
T ss_pred HhcCCcc
Confidence 8776543
No 402
>KOG0576|consensus
Probab=99.95 E-value=1.3e-28 Score=263.48 Aligned_cols=254 Identities=25% Similarity=0.408 Sum_probs=205.6
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
-++++|..+..+|.|.||.|||+++. ..+...|||+++-+.... ..-.++|+-+++.-+|||||.++|.+...+
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~-----~s~elaavkvVkLep~dd-~~~iqqei~~~~dc~h~nivay~gsylr~d 85 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDK-----RSGELAAVKVVKLEPGDD-FSGIQQEIGMLRDCRHPNIVAYFGSYLRRD 85 (829)
T ss_pred CCccchhheeeecCCcccchhhhccc-----ccCchhhheeeeccCCcc-ccccccceeeeecCCCcChHHHHhhhhhhc
Confidence 35568999999999999999999863 567899999998765543 345778999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
.+++.|||+.+|+|.+.-+ ..+++++.++..+.+..++||+|||+.+=+|||||-.|||+
T Consensus 86 klwicMEycgggslQdiy~--------------------~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill 145 (829)
T KOG0576|consen 86 KLWICMEYCGGGSLQDIYH--------------------VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL 145 (829)
T ss_pred CcEEEEEecCCCcccceee--------------------ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceee
Confidence 9999999999999987543 45789999999999999999999999999999999999999
Q ss_pred cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhc---cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL---YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE 598 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~---~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e 598 (653)
++.|.+|++|||.+..+.. .........||+.|||||+.. .+.|...+|||++|+...|+-. -.+|..+.-+..
T Consensus 146 td~gDvklaDfgvsaqita--ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~e-Lqpplfdlhpmr 222 (829)
T KOG0576|consen 146 TDEGDVKLADFGVSAQITA--TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGE-LQPPLFDLHPMR 222 (829)
T ss_pred cccCceeecccCchhhhhh--hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhh-cCCcccccchHH
Confidence 9999999999999865421 122335578999999999864 4578999999999999999864 223333333333
Q ss_pred HHHHHH-cCCc---cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 599 VVKYIK-EGNI---LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 599 ~~~~i~-~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
...... .+.. ++.+..+.+.+.+|++.++.++|.+||+++.+++|.
T Consensus 223 ~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~ 272 (829)
T KOG0576|consen 223 ALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHP 272 (829)
T ss_pred HHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheece
Confidence 333332 2221 223345788999999999999999999999988765
No 403
>smart00130 KR Kringle domain. Named after a Danish pastry. Found in several serine proteases and in ROR-like receptors. Can occur in up to 38 copies (in apolipoprotein(a)). Plasminogen-like kringles possess affinity for free lysine and lysine- containing peptides.
Probab=99.95 E-value=2.9e-28 Score=202.35 Aligned_cols=82 Identities=54% Similarity=1.209 Sum_probs=77.3
Q ss_pred ccccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccCCC
Q psy5539 186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPTC 265 (653)
Q Consensus 186 ~C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip~C 265 (653)
+||.|+|..|||++++|.+|++||.|+++.++.+.+.+..+|...+.||||||||++..+|||||.++...||||+||+|
T Consensus 2 ~Cy~g~G~~YrG~~s~T~sG~~Cl~W~s~~~~~~~~~~~~~~~~~~~hNyCRNPd~~~~~PWCyv~~~~~~~e~C~ip~C 81 (83)
T smart00130 2 DCYAGNGESYRGTVSVTKSGKPCQRWDSQTPHLHRFTPESFPEAGLEENYCRNPDGDSEGPWCYTTDPNVRWEYCDIPQC 81 (83)
T ss_pred cCcCCCCCcccccceECCCCCcccCccCCCCcccccChhhCccccccccccCCCCCCCCCCEEEeCCCCcceEeCCCCcC
Confidence 79999999999999999999999999999999998888899988899999999999766999999888899999999999
Q ss_pred CC
Q psy5539 266 AD 267 (653)
Q Consensus 266 ~~ 267 (653)
.+
T Consensus 82 ~~ 83 (83)
T smart00130 82 EE 83 (83)
T ss_pred CC
Confidence 74
No 404
>cd00108 KR Kringle domain; Kringle domains are believed to play a role in binding mediators, such as peptides, other proteins, membranes, or phospholipids. They are autonomous structural domains, found in a varying number of copies, in blood clotting and fibrinolytic proteins, some serine proteases and plasma proteins. Plasminogen-like kringles possess affinity for free lysine and lysine-containing peptides.
Probab=99.95 E-value=3.3e-28 Score=202.22 Aligned_cols=82 Identities=54% Similarity=1.144 Sum_probs=77.7
Q ss_pred cccccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccCC
Q psy5539 185 YDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPT 264 (653)
Q Consensus 185 ~~C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip~ 264 (653)
.+||.|+|..|||++++|.+|++||.|+++.++.|.+.+..+|...+.||||||||++..+|||||.++...||||+||+
T Consensus 2 ~~Cy~g~G~~YrG~~s~T~sG~~C~~W~s~~~~~~~~~~~~~~~~~~~hNyCRNPd~~~~~PWCyv~~~~~~~eyC~ip~ 81 (83)
T cd00108 2 RDCYWGNGESYRGTVSTTKSGKPCQRWNSQLPHQHKFNPERFPEGLLEENYCRNPDGDPEGPWCYTTDPNVRWEYCDIPR 81 (83)
T ss_pred CcCCCCCCCcccCceeECCCCCcccCCcccCcccccccccccccccccccccCCCCCCCCCCEEEeCCCCccEeecCCCc
Confidence 47999999999999999999999999999999999999999998889999999999995699999998889999999999
Q ss_pred CC
Q psy5539 265 CA 266 (653)
Q Consensus 265 C~ 266 (653)
|+
T Consensus 82 C~ 83 (83)
T cd00108 82 CE 83 (83)
T ss_pred Cc
Confidence 95
No 405
>KOG0665|consensus
Probab=99.94 E-value=1.7e-27 Score=236.48 Aligned_cols=247 Identities=23% Similarity=0.272 Sum_probs=187.5
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC---
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--- 440 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--- 440 (653)
.+|.-++.+|.|+- .|-.|.+ ...++.||+|.+... ......++..+|..++..++|+||++++.++.-.
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D-----~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l 90 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFD-----QVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTL 90 (369)
T ss_pred eeeeeecccCCCCc-eEEecch-----hhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccH
Confidence 35677778899988 5655543 345688999987543 2223345678999999999999999999998543
Q ss_pred ---CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 441 ---KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 441 ---~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
.+.++|||||.. +|.+.+. ..++...+..|+.|++.|+.|||+.+|+||||||+
T Consensus 91 ~~~~e~y~v~e~m~~-nl~~vi~----------------------~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPs 147 (369)
T KOG0665|consen 91 EEFQEVYLVMELMDA-NLCQVIL----------------------MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPS 147 (369)
T ss_pred HHHHhHHHHHHhhhh-HHHHHHH----------------------HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcc
Confidence 367999999954 8888775 34688899999999999999999999999999999
Q ss_pred CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
||++..+..+||.|||+|+.-.. .-..+....+-.|.|||++.+..+.+.+||||+||++.||++|.. .|.|.+.-
T Consensus 148 nivv~~~~~lKi~dfg~ar~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~V-lf~g~d~i 223 (369)
T KOG0665|consen 148 NIVVNSDCTLKILDFGLARTEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTV-LFPGKDHI 223 (369)
T ss_pred cceecchhheeeccchhhcccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceE-EecCchHH
Confidence 99999999999999999975321 123344556678999999999999999999999999999998654 44444322
Q ss_pred HHHHHHHc--------------------------------------CCc---cCCCCCCcHHHHHHHHHhhccCCCCCCC
Q psy5539 598 EVVKYIKE--------------------------------------GNI---LQAPDNTPDALYDLMKLCWNMKPMNRPS 636 (653)
Q Consensus 598 e~~~~i~~--------------------------------------~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs 636 (653)
+-..++.+ ..+ ++.+......+++++.+||-.+|++|.+
T Consensus 224 dQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Ris 303 (369)
T KOG0665|consen 224 DQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRIS 303 (369)
T ss_pred HHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhccc
Confidence 11111100 000 0001112356889999999999999999
Q ss_pred HHHHHHHH
Q psy5539 637 FRTIYQTL 644 (653)
Q Consensus 637 ~~eil~~L 644 (653)
++++++|+
T Consensus 304 v~daL~HP 311 (369)
T KOG0665|consen 304 VDDALRHP 311 (369)
T ss_pred HHHHhcCC
Confidence 99999886
No 406
>KOG0670|consensus
Probab=99.94 E-value=3e-27 Score=246.42 Aligned_cols=257 Identities=20% Similarity=0.313 Sum_probs=202.8
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC------CCccceE
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD------HPNIVKL 433 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~------HpnIv~l 433 (653)
.|+-.++|.+....|+|-|++|.+|.+. ..+..||||+++.+ +.+.+.=.+|+++|++|+ --|+++|
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~-----~r~~~vAiKIIRnN--E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQ-----ARGQEVAIKIIRNN--EVMHKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeecccc-----CCCCeeEEEEeecc--hHHhhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 3556678888889999999999999863 34558999999854 556667789999999995 3589999
Q ss_pred EeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecC
Q psy5539 434 LGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRD 513 (653)
Q Consensus 434 ~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrD 513 (653)
+..|...+++|||||-+. -+|.+.|+.... .-.|.......++.|+..||..|-.-+|+|.|
T Consensus 500 ~r~F~hknHLClVFE~Ls-lNLRevLKKyG~-----------------nvGL~ikaVRsYaqQLflALklLK~c~vlHaD 561 (752)
T KOG0670|consen 500 FRHFKHKNHLCLVFEPLS-LNLREVLKKYGR-----------------NVGLHIKAVRSYAQQLFLALKLLKKCGVLHAD 561 (752)
T ss_pred HHHhhhcceeEEEehhhh-chHHHHHHHhCc-----------------ccceeehHHHHHHHHHHHHHHHHHhcCeeecc
Confidence 999999999999999874 599999985542 33577788999999999999999999999999
Q ss_pred CCCCCEeEcCC-CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q psy5539 514 LATRNCLINDQ-MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY 592 (653)
Q Consensus 514 Lkp~NILl~~~-~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~ 592 (653)
|||+|||++++ ..+||||||.|.....++. +....+-.|.|||.+.+-.|+...|+||.||+||||+||.. .|.
T Consensus 562 IKPDNiLVNE~k~iLKLCDfGSA~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkI-lFp 636 (752)
T KOG0670|consen 562 IKPDNILVNESKNILKLCDFGSASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKI-LFP 636 (752)
T ss_pred cCccceEeccCcceeeeccCccccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccce-ecC
Confidence 99999999976 5789999999976532221 11223346999999999999999999999999999999765 677
Q ss_pred CCCHHHHHHHHHc------------CCccC--------------------------------------------CCCC--
Q psy5539 593 GLTHEEVVKYIKE------------GNILQ--------------------------------------------APDN-- 614 (653)
Q Consensus 593 ~~~~~e~~~~i~~------------~~~~~--------------------------------------------~~~~-- 614 (653)
|.+.-+++....+ |++.. .|+.
T Consensus 637 G~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~ 716 (752)
T KOG0670|consen 637 GRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQP 716 (752)
T ss_pred CCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhH
Confidence 7665554433221 11110 0000
Q ss_pred -CcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 615 -TPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 615 -~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
.-.++.+|+..|+..||++|.|..+.++|++-
T Consensus 717 ~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi 749 (752)
T KOG0670|consen 717 KIVQQLRDLLDKMLILDPEKRITVNQALKHPFI 749 (752)
T ss_pred HHHHHHHHHHHHHhccChhhcCCHHHHhcCCcc
Confidence 11478899999999999999999999998864
No 407
>KOG1290|consensus
Probab=99.93 E-value=2.3e-25 Score=231.62 Aligned_cols=135 Identities=25% Similarity=0.385 Sum_probs=114.0
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-----C---Cccce
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-----H---PNIVK 432 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-----H---pnIv~ 432 (653)
.|...+|.+.++||-|-|++||++.+. ...+.||+|+.+.. +...+....||++|++++ | .+||+
T Consensus 74 ~F~~gRY~v~rKLGWGHFSTVWLawDt-----q~~r~VAlKVvKSA--qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~ 146 (590)
T KOG1290|consen 74 VFNGGRYHVQRKLGWGHFSTVWLAWDT-----QNKRYVALKVVKSA--QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQ 146 (590)
T ss_pred cccCceEEEEEeccccccceeEEEeec-----cCCeEEEEEEEehh--hHHHHHHHHHHHHHHHHHhcCCCCCCCceeee
Confidence 466689999999999999999999864 45688999999853 445667889999999984 2 47999
Q ss_pred EEeEEec----CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC-
Q psy5539 433 LLGVCAV----GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR- 507 (653)
Q Consensus 433 l~g~~~~----~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~- 507 (653)
|++.|.. +.+.|||+|++ |-+|..++... ....++...+.+|++||+.||.|||.+
T Consensus 147 LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s------------------~YrGlpl~~VK~I~~qvL~GLdYLH~ec 207 (590)
T KOG1290|consen 147 LLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYS------------------NYRGLPLSCVKEICRQVLTGLDYLHREC 207 (590)
T ss_pred eeccceecCCCCcEEEEEehhh-hhHHHHHHHHh------------------CCCCCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999864 56899999999 45899988732 235688999999999999999999976
Q ss_pred CceecCCCCCCEeE
Q psy5539 508 KFVHRDLATRNCLI 521 (653)
Q Consensus 508 ~ivHrDLkp~NILl 521 (653)
||||-||||+|||+
T Consensus 208 gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 208 GIIHTDLKPENVLL 221 (590)
T ss_pred CccccCCCcceeee
Confidence 99999999999998
No 408
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=2.3e-26 Score=271.46 Aligned_cols=200 Identities=15% Similarity=0.128 Sum_probs=143.2
Q ss_pred hCCC-CccceEEeEE-------ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHH
Q psy5539 424 EFDH-PNIVKLLGVC-------AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIAL 495 (653)
Q Consensus 424 ~l~H-pnIv~l~g~~-------~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 495 (653)
.++| +||+++++++ ...+.+.+++||+ +++|.++|+. ....+++.+++.++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-------------------~~~~~~~~~~~~i~~ 87 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-------------------PDRSVDAFECFHVFR 87 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-------------------ccccccHHHHHHHHH
Confidence 3445 5788888877 2334678889987 5699999961 124589999999999
Q ss_pred HHHHHHHHhhhCCceecCCCCCCEeEcC-------------------CCcEEEeccCcccccccccc--------cc---
Q psy5539 496 QIASGMVYLSDRKFVHRDLATRNCLIND-------------------QMVVKIADFGLSRKMYLQDY--------YK--- 545 (653)
Q Consensus 496 qia~gL~yLH~~~ivHrDLkp~NILl~~-------------------~~~vkI~DfGla~~~~~~~~--------~~--- 545 (653)
||++||.|||+++|+||||||+||||+. ++.+||+|||+++....... ..
T Consensus 88 qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~ 167 (793)
T PLN00181 88 QIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQP 167 (793)
T ss_pred HHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCC
Confidence 9999999999999999999999999954 44566666666653211000 00
Q ss_pred ---CCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccCCCCCCcHHHHHH
Q psy5539 546 ---GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDL 622 (653)
Q Consensus 546 ---~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~~~~~~~~~l~~l 622 (653)
......+|+.|||||.+.+..++.++|||||||+||||++ +.+|+.. ..+.+..+.................++
T Consensus 168 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (793)
T PLN00181 168 FPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFC-PVSSREE--KSRTMSSLRHRVLPPQILLNWPKEASF 244 (793)
T ss_pred CcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhh-CCCchhh--HHHHHHHHHHhhcChhhhhcCHHHHHH
Confidence 0011346778999999999999999999999999999998 3445432 122333333222211111234567789
Q ss_pred HHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 623 MKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 623 i~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
+..||+.+|.+||++.+|++++|-
T Consensus 245 ~~~~L~~~P~~Rps~~eil~h~~~ 268 (793)
T PLN00181 245 CLWLLHPEPSCRPSMSELLQSEFI 268 (793)
T ss_pred HHHhCCCChhhCcChHHHhhchhh
Confidence 999999999999999999998764
No 409
>KOG1345|consensus
Probab=99.93 E-value=5.1e-26 Score=220.85 Aligned_cols=241 Identities=22% Similarity=0.301 Sum_probs=182.6
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeE-EecCCc
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGV-CAVGKP 442 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~-~~~~~~ 442 (653)
+.|.+.+.||+|.||.+-++++++ +.+.+++|.+.... .-+++|.+|..---.| .|.||+.-+++ ++..+.
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~-----s~t~ivlKavp~p~--tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQ-----SKTRIVLKAVPRPQ--TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccC-----CceEEEeeccCcch--hhHHHHHHHhccceeeccchhhhHHHHHHhhcCce
Confidence 457888899999999999999754 55889999987543 3467899998765555 58999988765 466778
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
.++++||++.|||.+-+. ...+.+....+++.|+++|+.|||++++||||||.+||||-
T Consensus 97 YvF~qE~aP~gdL~snv~---------------------~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif 155 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVE---------------------AAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIF 155 (378)
T ss_pred EEEeeccCccchhhhhcC---------------------cccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEe
Confidence 899999999999987653 24567888899999999999999999999999999999994
Q ss_pred --CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-----CCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 523 --DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-----KYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 523 --~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
+...+||+|||+++..... -....-+..|-+||....- ...+.+|||.||++++.+++|.. ||+...
T Consensus 156 ~~df~rvKlcDFG~t~k~g~t-----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~-PWQka~ 229 (378)
T KOG1345|consen 156 DADFYRVKLCDFGLTRKVGTT-----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKF-PWQKAS 229 (378)
T ss_pred cCCccEEEeeecccccccCce-----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCC-cchhhh
Confidence 3458999999998754211 1222334568899876532 35688999999999999999665 777432
Q ss_pred H-----HHHHHHHHcCCccCCCC---CCcHHHHHHHHHhhccCCCCCCCHHHH
Q psy5539 596 H-----EEVVKYIKEGNILQAPD---NTPDALYDLMKLCWNMKPMNRPSFRTI 640 (653)
Q Consensus 596 ~-----~e~~~~i~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~ei 640 (653)
. .+..++ ..+..+..|. ..++.+..+.++-+.+++++|-...++
T Consensus 230 ~~d~~Y~~~~~w-~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 230 IMDKPYWEWEQW-LKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred ccCchHHHHHHH-hcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHH
Confidence 2 223333 2333334443 477889999999999999999444433
No 410
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=5.3e-25 Score=211.53 Aligned_cols=163 Identities=19% Similarity=0.308 Sum_probs=128.3
Q ss_pred CChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEecc
Q psy5539 453 GDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADF 532 (653)
Q Consensus 453 gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~Df 532 (653)
|+|.++++. ....+++.+++.|+.||+.||+|||+++ ||+|||+++++.+|+ |
T Consensus 1 GsL~~~l~~-------------------~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--f 53 (176)
T smart00750 1 VSLADILEV-------------------RGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--D 53 (176)
T ss_pred CcHHHHHHH-------------------hCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--c
Confidence 688888862 1345899999999999999999999998 999999999999999 9
Q ss_pred CccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCccC-
Q psy5539 533 GLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH-EEVVKYIKEGNILQ- 610 (653)
Q Consensus 533 Gla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~-~e~~~~i~~~~~~~- 610 (653)
|+++.... ....+++.|||||.+.+..++.++||||||+++|||++|.. ||..... ......+..+....
T Consensus 54 G~~~~~~~-------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~ 125 (176)
T smart00750 54 GSVAFKTP-------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYEL-PYNEERELSAILEILLNGMPADD 125 (176)
T ss_pred cceEeecc-------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCC-CccccchhcHHHHHHHHHhccCC
Confidence 99876422 12257889999999999999999999999999999999665 7654432 23333333222111
Q ss_pred -----CCCCCcH--HHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 611 -----APDNTPD--ALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 611 -----~~~~~~~--~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
.+...+. ++.+++.+||+.+|.+||++.+++++++.+..+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 126 PRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred ccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 1112233 699999999999999999999999999987654
No 411
>KOG1167|consensus
Probab=99.92 E-value=1.6e-25 Score=230.17 Aligned_cols=256 Identities=23% Similarity=0.388 Sum_probs=195.3
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeEEec
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGVCAV 439 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~ 439 (653)
....+.|..+++||+|.|++||++.+.. .......||+|.+...... ..+..|+++|..+. +.||+++.+.+..
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~--~~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIE--QDTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhh--hccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 3345678889999999999999998743 1235678999999765544 35789999999995 8999999999999
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
++...+|+||+++.+..++++ .++..++..+++.++.||.++|..|||||||||+|+
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~-----------------------~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNF 163 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYR-----------------------SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNF 163 (418)
T ss_pred CCeeEEEecccCccCHHHHHh-----------------------cCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccc
Confidence 999999999999999988885 367888999999999999999999999999999999
Q ss_pred eEc-CCCcEEEeccCcccccc--c-----c---------------------------cccc--------CCCCCCCcccc
Q psy5539 520 LIN-DQMVVKIADFGLSRKMY--L-----Q---------------------------DYYK--------GDENDAIPVRW 556 (653)
Q Consensus 520 Ll~-~~~~vkI~DfGla~~~~--~-----~---------------------------~~~~--------~~~~~~~t~~y 556 (653)
|.+ ..+.-.|.|||||.... . . .+.. ..-..+||++|
T Consensus 164 L~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~Gf 243 (418)
T KOG1167|consen 164 LYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGF 243 (418)
T ss_pred ccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCC
Confidence 997 45678999999986210 0 0 0000 01135689999
Q ss_pred ccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCC-CCHHH-------------HHHHH-HcCC--c----------
Q psy5539 557 MPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYG-LTHEE-------------VVKYI-KEGN--I---------- 608 (653)
Q Consensus 557 ~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~-~~~~e-------------~~~~i-~~~~--~---------- 608 (653)
.|||++.. ..-|.++||||.|||++-++++.. ||.. .+.-+ +.+.. ..|. +
T Consensus 244 RaPEvL~k~~~QttaiDiws~GVI~Lslls~~~-PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~ 322 (418)
T KOG1167|consen 244 RAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRY-PFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIP 322 (418)
T ss_pred CchHHHhhccCcCCccceeeccceeehhhcccc-ccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccH
Confidence 99999875 467899999999999999998555 5542 21111 11000 0011 0
Q ss_pred ------------------------cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 609 ------------------------LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 609 ------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
....+..+..+++|+.+|++.||.+|.|+++.++|.+
T Consensus 323 e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpF 383 (418)
T KOG1167|consen 323 ELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPF 383 (418)
T ss_pred HHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcC
Confidence 0011224568999999999999999999999998864
No 412
>PF00051 Kringle: Kringle domain; InterPro: IPR000001 Kringles are autonomous structural domains, found throughout the blood clotting and fibrinolytic proteins. Kringle domains are believed to play a role in binding mediators (e.g., membranes, other proteins or phospholipids), and in the regulation of proteolytic activity [, , ]. Kringle domains [, , ] are characterised by a triple loop, 3-disulphide bridge structure, whose conformation is defined by a number of hydrogen bonds and small pieces of anti-parallel beta-sheet. They are found in a varying number of copies in some plasma proteins including prothrombin and urokinase-type plasminogen activator, which are serine proteases belonging to MEROPS peptidase family S1A. Steroid or nuclear hormone receptors (4A nuclear receptor, NRs) constitute an important superfamily of transcription regulators that are involved in widely diverse physiological functions, including control of embryonic development, cell differentiation and homeostasis. Members of the superfamily include the steroid hormone receptors and receptors for thyroid hormone, retinoids, 1,25-dihydroxy-vitamin D3 and a variety of other ligands []. The proteins function as dimeric molecules in nuclei to regulate the transcription of target genes in a ligand-responsive manner [, ]. In addition to C-terminal ligand-binding domains, these nuclear receptors contain a highly-conserved, N-terminal zinc-finger that mediates specific binding to target DNA sequences, termed ligand-responsive elements. In the absence of ligand, steroid hormone receptors are thought to be weakly associated with nuclear components; hormone binding greatly increases receptor affinity. NRs are extremely important in medical research, a large number of them being implicated in diseases such as cancer, diabetes, hormone resistance syndromes, etc. While several NRs act as ligand-inducible transcription factors, many do not yet have a defined ligand and are accordingly termed 'orphan' receptors. During the last decade, more than 300 NRs have been described, many of which are orphans, which cannot easily be named due to current nomenclature confusions in the literature. However, a new system has recently been introduced in an attempt to rationalise the increasingly complex set of names used to describe superfamily members.; PDB: 1JFN_A 3HN4_A 2FEB_A 4A5T_S 5HPG_B 4DUR_B 4DUU_A 2KNF_A 2QJ4_B 2QJ2_A ....
Probab=99.92 E-value=3.6e-26 Score=189.17 Aligned_cols=78 Identities=47% Similarity=1.164 Sum_probs=71.3
Q ss_pred cccCCccccceeeeccCCCCcccccCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccCCC
Q psy5539 187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHE-RPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPTC 265 (653)
Q Consensus 187 C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~-~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip~C 265 (653)
||.|+|..|||++++|.+|++|++|+++.++.+. +.+..++...++||||||||++.. |||||.++.+.||||+||.|
T Consensus 1 Cy~~~G~~YrG~~~~T~sG~~C~~W~~~~~~~~~~~~~~~~~~~~l~~NyCRNPd~~~~-PWCy~~~~~~~~~~C~Ip~C 79 (79)
T PF00051_consen 1 CYTGNGQDYRGTVNVTESGKPCLPWNSQSPHKHSFYTPSSYPEAGLGHNYCRNPDGDPR-PWCYTKDPGIRWEYCDIPKC 79 (79)
T ss_dssp SBSTTSTTBSSSCTBBTTSCBBE-TTSCSSSHHSSSSTTTSTTSTHTTTSSBETTSCSS-SEEEBSSTTESEEEBSSEBS
T ss_pred CCCCCCCcceeceeECCCCCccccCccCCCcccccceeccccccCcCcceeeCCCCCCC-cceEecCCCceEEecCCCcC
Confidence 8999999999999999999999999999988754 367788888899999999999994 99999889999999999998
No 413
>KOG0195|consensus
Probab=99.91 E-value=6.3e-25 Score=213.00 Aligned_cols=253 Identities=23% Similarity=0.435 Sum_probs=201.6
Q ss_pred CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
...++.+..+|.+...|..|+|++.+ ..+++|+++-. .......+|..|.-.|+-+.||||++++|.|....
T Consensus 188 d~~~lnl~tkl~e~hsgelwrgrwqg-------ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp 260 (448)
T KOG0195|consen 188 DVSSLNLITKLAESHSGELWRGRWQG-------NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP 260 (448)
T ss_pred chhhhhhhhhhccCCCcccccccccC-------cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC
Confidence 33455667789999999999999865 34677777532 23344568999999999999999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC-Cce-ecCCCCCCE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFV-HRDLATRNC 519 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-~iv-HrDLkp~NI 519 (653)
.+.++..||+.|+|...|+.. ..-..+..++.+++.++|+||+|||+. .++ ---|.+..|
T Consensus 261 nlv~isq~mp~gslynvlhe~------------------t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hv 322 (448)
T KOG0195|consen 261 NLVIISQYMPFGSLYNVLHEQ------------------TSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHV 322 (448)
T ss_pred CceEeeeeccchHHHHHHhcC------------------ccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceE
Confidence 999999999999999999722 122356778999999999999999985 343 456899999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCC---CchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYT---VESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t---~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
+||++.+++|+ ++-++. .-......-.+.||+||.+...+-+ .+.|+|||++++|||-|.. .||.+.++
T Consensus 323 midedltaris-mad~kf------sfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~tre-vpfadlsp 394 (448)
T KOG0195|consen 323 MIDEDLTARIS-MADTKF------SFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTRE-VPFADLSP 394 (448)
T ss_pred Eecchhhhhee-ccccee------eeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccc-cccccCCc
Confidence 99999988875 222221 1122334556789999999876543 6799999999999999955 58988777
Q ss_pred HHH-HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539 597 EEV-VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK 648 (653)
Q Consensus 597 ~e~-~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~ 648 (653)
-|. ++...+|.....|+.++..+.+||..|.+.||.+||.|..|+-.|++++
T Consensus 395 mecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 395 MECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred hhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 665 4445678888899999999999999999999999999999999988774
No 414
>KOG1164|consensus
Probab=99.90 E-value=3.1e-22 Score=211.77 Aligned_cols=259 Identities=17% Similarity=0.219 Sum_probs=197.1
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCC----CccceEEeEE-ecC
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH----PNIVKLLGVC-AVG 440 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~H----pnIv~l~g~~-~~~ 440 (653)
+|.+.+.||+|+||.||+|..... ....+|+|........... .+..|+.++..+.. +++..+++.. ..+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~----~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~ 93 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSE----KNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTE 93 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCC----CCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCC
Confidence 789999999999999999986431 1467888887654332222 57788888888873 5888888888 477
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
...++||+.+ |.+|.++.+.. ....++..+.+.|+.|++.+|++||+.|++||||||.|++
T Consensus 94 ~~~~iVM~l~-G~sL~dl~~~~------------------~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~ 154 (322)
T KOG1164|consen 94 DFNFIVMSLL-GPSLEDLRKRN------------------PPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFV 154 (322)
T ss_pred ceeEEEEecc-CccHHHHHHhC------------------CCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHee
Confidence 7889999987 66999977522 1356899999999999999999999999999999999999
Q ss_pred EcCC-----CcEEEeccCccc--cccccccc---c--C-CCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCC
Q psy5539 521 INDQ-----MVVKIADFGLSR--KMYLQDYY---K--G-DENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFA 587 (653)
Q Consensus 521 l~~~-----~~vkI~DfGla~--~~~~~~~~---~--~-~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~ 587 (653)
++.. ..+.|.|||+++ ........ . . .....||.+|+++....+...+.+.|+||++.++.|++.|.
T Consensus 155 ~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~ 234 (322)
T KOG1164|consen 155 VGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGS 234 (322)
T ss_pred ecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCC
Confidence 9865 469999999998 33222211 1 1 12345899999999999999999999999999999999866
Q ss_pred CCCCCCCCHHHHHHHH---HcCCccC-CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 588 LQPYYGLTHEEVVKYI---KEGNILQ-APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 588 ~~p~~~~~~~e~~~~i---~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
.||.+.........+ ....... .....+.++.+++..+-..+..++|....+...+.....
T Consensus 235 -LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~ 299 (322)
T KOG1164|consen 235 -LPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD 299 (322)
T ss_pred -CCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence 588665532222222 2221111 234456788888888888999999999999888776544
No 415
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=7.6e-23 Score=216.93 Aligned_cols=169 Identities=17% Similarity=0.069 Sum_probs=127.0
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc----cHHHHHHHHHHHHHHhhCCCCccce-EEeE
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA----SEYLQTDFEREACLLAEFDHPNIVK-LLGV 436 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~----~~~~~~~f~~Ei~il~~l~HpnIv~-l~g~ 436 (653)
...++|.+.+.||+|+||+||+|+... .++..||||++.... .......|.+|+++|++++|+|+++ +++.
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~----~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~ 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAG----DPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcC----CCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc
Confidence 344679999999999999999998632 245668999875331 2334667999999999999999995 4432
Q ss_pred EecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC-C
Q psy5539 437 CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL-A 515 (653)
Q Consensus 437 ~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL-k 515 (653)
+..+|||||+++++|.. +. + .. ...++.|++++|.|||++||+|||| |
T Consensus 91 ----~~~~LVmE~~~G~~L~~-~~---~--------------------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~K 139 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLHL-AR---P--------------------HG---DPAWFRSAHRALRDLHRAGITHNDLAK 139 (365)
T ss_pred ----CCcEEEEEccCCCCHHH-hC---c--------------------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCC
Confidence 45799999999999962 11 0 00 1367889999999999999999999 9
Q ss_pred CCCEeEcCCCcEEEeccCccccccccccccC------CCCCCCccccccchhhccC
Q psy5539 516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKG------DENDAIPVRWMPLESILYN 565 (653)
Q Consensus 516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~------~~~~~~t~~y~aPE~~~~~ 565 (653)
|+|||++.++.+||+|||+|+.......... -....++..|+|||.+...
T Consensus 140 P~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 140 PQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9999999999999999999986643221100 0223456678999987543
No 416
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.89 E-value=2.3e-21 Score=200.91 Aligned_cols=251 Identities=30% Similarity=0.437 Sum_probs=199.7
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHH--HHHHHHHHHHHHhhCCCC-ccceEEeEEecCCce
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY--LQTDFEREACLLAEFDHP-NIVKLLGVCAVGKPM 443 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~--~~~~f~~Ei~il~~l~Hp-nIv~l~g~~~~~~~~ 443 (653)
|.+.+.||.|+||.||++... ..+++|.+....... ....+.+|+.+++.+.|+ +|+++++++......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--------~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--------KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--------cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEE
Confidence 567888999999999999863 678999987664433 467899999999999988 799999999777778
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++++||+.+++|.+++..... . ..++......++.|++.++.|+|+.+++|||+||+||+++.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~----------------~-~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~ 136 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGR----------------K-GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR 136 (384)
T ss_pred EEEEecCCCCcHHHHHHhccc----------------c-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecC
Confidence 999999999999977752110 0 35788899999999999999999999999999999999999
Q ss_pred CC-cEEEeccCcccccccccccc----CCCCCCCccccccchhhcc---CCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539 524 QM-VVKIADFGLSRKMYLQDYYK----GDENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYYGLT 595 (653)
Q Consensus 524 ~~-~vkI~DfGla~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~---~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~ 595 (653)
.+ .++++|||+++......... ......++..|++||.+.+ ...+...|+||+|+++++++++.. |+....
T Consensus 137 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~-p~~~~~ 215 (384)
T COG0515 137 DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLP-PFEGEK 215 (384)
T ss_pred CCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCC-CCCCCC
Confidence 88 79999999997553332221 2355678899999999988 688999999999999999998554 666555
Q ss_pred ----HHHHHHHHHcCCcc-CCCC---CC----cHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy5539 596 ----HEEVVKYIKEGNIL-QAPD---NT----PDALYDLMKLCWNMKPMNRPSFRTIYQT 643 (653)
Q Consensus 596 ----~~e~~~~i~~~~~~-~~~~---~~----~~~l~~li~~cl~~dP~~RPs~~eil~~ 643 (653)
..+....+...... .... .. ...+.+++..++..+|..|.+..+....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 216 NSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 35555555544322 1111 11 1578999999999999999998877654
No 417
>KOG1163|consensus
Probab=99.88 E-value=1.7e-21 Score=186.57 Aligned_cols=259 Identities=20% Similarity=0.292 Sum_probs=203.6
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCC-CccceEEeEEecC
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH-PNIVKLLGVCAVG 440 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~H-pnIv~l~g~~~~~ 440 (653)
+..+.|.++++||.|+||.+|+|... .++..||||+-+..+.. -.+..|..+.+.|++ ..|..+..+..++
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i-----~~ge~VAiK~Es~~a~h---pqL~yEskvY~iL~~g~GiP~i~~y~~e~ 83 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISI-----TSGEEVAIKLESSKAKH---PQLLYESKVYRILQGGVGIPHIRHYGTEK 83 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeec-----cCCceEEEEeecccCCC---cchhHHHHHHHHhccCCCCchhhhhcccc
Confidence 44568999999999999999999753 46788999998765443 246788899999976 5677777777888
Q ss_pred CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
..-.||||.+ |-+|.+.+..++ ..++.++.+-++-|++.-++|+|.+++|||||||+|+|
T Consensus 84 ~ynvlVMdLL-GPsLEdLfnfC~-------------------R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFL 143 (341)
T KOG1163|consen 84 DYNVLVMDLL-GPSLEDLFNFCS-------------------RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFL 143 (341)
T ss_pred ccceeeeecc-CccHHHHHHHHh-------------------hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCcccee
Confidence 8899999988 669999987543 35788899999999999999999999999999999999
Q ss_pred EcCC---CcEEEeccCcccccccccc-----ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q psy5539 521 INDQ---MVVKIADFGLSRKMYLQDY-----YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY 592 (653)
Q Consensus 521 l~~~---~~vkI~DfGla~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~ 592 (653)
.+-+ ..+.++|||||+....... +..+....||.+|++-....+-..+.+.|+-|+|.+|..+.- |..||+
T Consensus 144 MGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnr-G~LPWQ 222 (341)
T KOG1163|consen 144 MGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNR-GSLPWQ 222 (341)
T ss_pred eccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeec-CCCccc
Confidence 9744 5789999999987643322 234456678999999998888888999999999999988775 556999
Q ss_pred CCCHH---HHHHHHHcCCccCCC----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539 593 GLTHE---EVVKYIKEGNILQAP----DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR 649 (653)
Q Consensus 593 ~~~~~---e~~~~i~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~ 649 (653)
+.... +-.+.|.+......+ ...|.++.-.+.-|-..--++-|...-|-+....+..
T Consensus 223 glka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 223 GLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred ccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 87543 445556555443222 4578899999999999888888987766555444433
No 418
>KOG1165|consensus
Probab=99.85 E-value=3.4e-20 Score=185.20 Aligned_cols=257 Identities=18% Similarity=0.307 Sum_probs=202.9
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~~~ 443 (653)
-.|.+.++||+|+||.++.|+. ...+..||||.-...... -+++.|.+..+.|. .++|...+-+...+..-
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~N-----l~nne~VAIKfEPrkS~A---PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~N 99 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKN-----LYNNEPVAIKFEPRKSEA---PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYN 99 (449)
T ss_pred ccceeccccccCcceeeecccc-----cccCceEEEEeccccCCc---chHHHHHHHHHHHcCCCCCCceeeeccccchh
Confidence 3689999999999999999973 345689999986543221 24567777777774 58888888888888888
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
.||+|.+ |-+|.|+..-+ ...++.++.+-||.|++.-++|+|++.+|.|||||+|+||+.
T Consensus 100 iLVidLL-GPSLEDLFD~C-------------------gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGr 159 (449)
T KOG1165|consen 100 ILVIDLL-GPSLEDLFDLC-------------------GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGR 159 (449)
T ss_pred hhhhhhh-CcCHHHHHHHh-------------------cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecC
Confidence 9999988 56899888633 256899999999999999999999999999999999999974
Q ss_pred C-----CcEEEeccCcccccccccc-----ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q psy5539 524 Q-----MVVKIADFGLSRKMYLQDY-----YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYG 593 (653)
Q Consensus 524 ~-----~~vkI~DfGla~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~ 593 (653)
. ..+.|+|||+|+....... +.......||.+||+--...+..-+.+.|+-|||-++.+.+- |..||+|
T Consensus 160 p~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLR-GsLPWQG 238 (449)
T KOG1165|consen 160 PGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR-GSLPWQG 238 (449)
T ss_pred CCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhcc-CCCcccc
Confidence 3 4689999999987543332 222345678999999999999999999999999999999997 4559987
Q ss_pred CC---HHHHHHHHHcCCccCCC----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539 594 LT---HEEVVKYIKEGNILQAP----DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 594 ~~---~~e~~~~i~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~ 650 (653)
.. ..+-.++|-+....... +..|.++..-|+..-..+-.+-|..+-+...+.++...
T Consensus 239 LKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 239 LKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred ccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 54 45566666665543322 45788999999988888999999988777666666554
No 419
>KOG0590|consensus
Probab=99.85 E-value=6e-22 Score=223.32 Aligned_cols=256 Identities=21% Similarity=0.261 Sum_probs=188.0
Q ss_pred eEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEc-cccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEE
Q psy5539 368 IYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKML-KDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLL 446 (653)
Q Consensus 368 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l-~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV 446 (653)
...+.+|.|++|.|+.+...........+.+.+| . +..........+..|..+-..|+|+|++..+..........-.
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcc-cCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence 3456789999998888765432222222333333 2 2223333333477888889999999998887777666655556
Q ss_pred EeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCc
Q psy5539 447 FEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV 526 (653)
Q Consensus 447 ~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~ 526 (653)
|||+++ ||..++. ....++..++..++.|++.|+.|||+.||.|||||++|+++..+|.
T Consensus 400 mE~~~~-Dlf~~~~--------------------~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~ 458 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVM--------------------SNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGI 458 (601)
T ss_pred hhcccH-HHHHHHh--------------------cccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCc
Confidence 999999 9999986 1235788899999999999999999999999999999999999999
Q ss_pred EEEeccCccccccccccc--cCCCCCCCccccccchhhccCCCC-CchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH--H
Q psy5539 527 VKIADFGLSRKMYLQDYY--KGDENDAIPVRWMPLESILYNKYT-VESDVWAFGVCLWEIFSFALQPYYGLTHEEVV--K 601 (653)
Q Consensus 527 vkI~DfGla~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~t-~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~--~ 601 (653)
+||+|||.+......... .......|+-.|+|||.+.+..|+ ...||||.|+++..|.++ ..||.....++.. +
T Consensus 459 lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~-~~~Wk~a~~~~~~~~~ 537 (601)
T KOG0590|consen 459 LKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILG-RFPWKVAKKSDNSFKT 537 (601)
T ss_pred eEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecC-CCccccccccccchhh
Confidence 999999998755322211 223345677789999999999987 568999999999999996 5677654433221 1
Q ss_pred HHH--cCCcc----CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539 602 YIK--EGNIL----QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN 646 (653)
Q Consensus 602 ~i~--~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~ 646 (653)
... ..... .....++.+.+.+|.++++.+|.+|.|+++|++..|-
T Consensus 538 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~ 588 (601)
T KOG0590|consen 538 NNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWI 588 (601)
T ss_pred hccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHh
Confidence 111 11111 1113467889999999999999999999999998874
No 420
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=9.8e-21 Score=187.41 Aligned_cols=174 Identities=15% Similarity=0.197 Sum_probs=133.6
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH--HHHHH------HHHHHHHHhhCCCCccce
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE--YLQTD------FEREACLLAEFDHPNIVK 432 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~--~~~~~------f~~Ei~il~~l~HpnIv~ 432 (653)
.+-.++|+.++.||+|+||.||++.. ++..+|||.+++.... ..... +++|+..+.+++|++|..
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~-------~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~ 99 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT-------DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLAS 99 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec-------CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCc
Confidence 34578899999999999999999753 1346999999865332 22222 689999999999999999
Q ss_pred EEeEEecC--------CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHh
Q psy5539 433 LLGVCAVG--------KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYL 504 (653)
Q Consensus 433 l~g~~~~~--------~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yL 504 (653)
+..++... ...+|||||++|.+|.++.. ++. ....+++.+|..|
T Consensus 100 ~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------------------------~~~----~~~~~i~~~l~~l 151 (232)
T PRK10359 100 LNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE------------------------ISE----DVKAKIKASIESL 151 (232)
T ss_pred ceEeeeecccccccccCCeEEEEEEECCccHHHhhh------------------------ccH----HHHHHHHHHHHHH
Confidence 98885532 35899999999999987642 122 2456999999999
Q ss_pred hhCCceecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHH
Q psy5539 505 SDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIF 584 (653)
Q Consensus 505 H~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ell 584 (653)
|+.|++|||++|+||++++++ ++|+|||.+....... +. ........+..++|+||||+++..+.
T Consensus 152 H~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~--------a~------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 152 HQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK--------AK------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred HHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchh--------hH------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999999999999999998 9999999886431111 00 11344556778999999999887665
No 421
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=2.8e-20 Score=181.35 Aligned_cols=138 Identities=23% Similarity=0.200 Sum_probs=105.4
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH--H-----------------------HHHHHHHHHHHHhhC
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE--Y-----------------------LQTDFEREACLLAEF 425 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~--~-----------------------~~~~f~~Ei~il~~l 425 (653)
..||+|+||.||+|... +++.||||+++..... . ......+|++++.++
T Consensus 3 ~~ig~G~~~~Vy~a~~~------~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 76 (190)
T cd05147 3 GCISTGKEANVYHATTA------NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL 76 (190)
T ss_pred CccccccceEEEEEECC------CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999852 5689999999754210 0 011234599999999
Q ss_pred CCCccceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHh-
Q psy5539 426 DHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYL- 504 (653)
Q Consensus 426 ~HpnIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yL- 504 (653)
.++++.....+.. ...+|||||+++++|...+. ....++..++..++.|++.+|.+|
T Consensus 77 ~~~~v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~--------------------~~~~~~~~~~~~i~~qi~~~L~~l~ 134 (190)
T cd05147 77 VTAGIPCPEPILL--KSHVLVMEFIGDDGWAAPRL--------------------KDAPLSESKARELYLQVIQIMRILY 134 (190)
T ss_pred HHCCCCCCcEEEe--cCCEEEEEEeCCCCCcchhh--------------------hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8887644333322 22389999999887764421 123578889999999999999999
Q ss_pred hhCCceecCCCCCCEeEcCCCcEEEeccCcccc
Q psy5539 505 SDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537 (653)
Q Consensus 505 H~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~ 537 (653)
|+.+|+||||||+|||+++ +.++|+|||+|..
T Consensus 135 H~~giiHrDlkP~NIli~~-~~v~LiDFG~a~~ 166 (190)
T cd05147 135 QDCRLVHADLSEYNLLYHD-GKLYIIDVSQSVE 166 (190)
T ss_pred HhCCcccCCCCHHHEEEEC-CcEEEEEcccccc
Confidence 7999999999999999984 7899999999964
No 422
>KOG1240|consensus
Probab=99.82 E-value=9.1e-21 Score=213.37 Aligned_cols=244 Identities=23% Similarity=0.287 Sum_probs=180.3
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHH---HHHHHHhhCCCCccceEEeEEecCCc
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFE---REACLLAEFDHPNIVKLLGVCAVGKP 442 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~---~Ei~il~~l~HpnIv~l~g~~~~~~~ 442 (653)
++.+.+.||++.|=+|.+|+++ +| .|+||++-..........|. +|++ .+.++|||.+++.-+-.....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~------eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR------EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC------Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHH
Confidence 6788999999999999999864 23 38888875443222222333 3444 566799999999888777788
Q ss_pred eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
-|||-+|..+ +|+|.|. ..+.+...+..-|+.|++.||.-+|..||+|+|||.+||||+
T Consensus 96 AylvRqyvkh-nLyDRlS--------------------TRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT 154 (1431)
T KOG1240|consen 96 AYLVRQYVKH-NLYDRLS--------------------TRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT 154 (1431)
T ss_pred HHHHHHHHhh-hhhhhhc--------------------cchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe
Confidence 8999999876 8888774 345678888899999999999999999999999999999999
Q ss_pred CCCcEEEeccCccccccccccccCCCC-----CCCccccccchhhccC-----------CCCCchhHHHHHHHHHHHHhC
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDEN-----DAIPVRWMPLESILYN-----------KYTVESDVWAFGVCLWEIFSF 586 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~-----~~~t~~y~aPE~~~~~-----------~~t~ksDVwSlGvvl~ellt~ 586 (653)
.-.-+.|+||..-+..|.......+-. ...-..|.|||.+... ..+++.||||+||++.||++-
T Consensus 155 SWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~E 234 (1431)
T KOG1240|consen 155 SWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLE 234 (1431)
T ss_pred eechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhc
Confidence 999999999988766554332111100 1112469999987541 267899999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHcCCccCCC-----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy5539 587 ALQPYYGLTHEEVVKYIKEGNILQAP-----DNTPDALYDLMKLCWNMKPMNRPSFRTIYQT 643 (653)
Q Consensus 587 ~~~p~~~~~~~e~~~~i~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 643 (653)
|.++|. ..+++.+ +.+. ...+ .-.+..+++|+..|++.||++|.++++.++.
T Consensus 235 g~PlF~---LSQL~aY-r~~~-~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 235 GRPLFT---LSQLLAY-RSGN-ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred CCCccc---HHHHHhH-hccC-ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 888874 2222222 1111 0000 0112368999999999999999999999876
No 423
>KOG1023|consensus
Probab=99.82 E-value=8.8e-20 Score=197.08 Aligned_cols=208 Identities=27% Similarity=0.487 Sum_probs=164.9
Q ss_pred HhhCCCCccceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHH
Q psy5539 422 LAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGM 501 (653)
Q Consensus 422 l~~l~HpnIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL 501 (653)
|+.+.|.|+.+++|.+..+...+.|.+|+..|+|.|.+.. ....+++.-...++++|++||
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-------------------~~~~~d~~F~~s~~rdi~~Gl 61 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-------------------EDIKLDYFFILSFIRDISKGL 61 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-------------------cccCccHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999962 235688889999999999999
Q ss_pred HHhhhCCc-eecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC---C----CCCchhH
Q psy5539 502 VYLSDRKF-VHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN---K----YTVESDV 573 (653)
Q Consensus 502 ~yLH~~~i-vHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~----~t~ksDV 573 (653)
+|||+..| .|+.|+++|+++|..+.+||+|||+.................-..-|.|||.+... . .+.+.||
T Consensus 62 ~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdi 141 (484)
T KOG1023|consen 62 AYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDI 141 (484)
T ss_pred HHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCe
Confidence 99998876 89999999999999999999999998765321111111222234569999998764 1 4778999
Q ss_pred HHHHHHHHHHHhCCCCCCCC----CCHHHHHHHHHc-CCccCCCC-----CCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy5539 574 WAFGVCLWEIFSFALQPYYG----LTHEEVVKYIKE-GNILQAPD-----NTPDALYDLMKLCWNMKPMNRPSFRTIYQT 643 (653)
Q Consensus 574 wSlGvvl~ellt~~~~p~~~----~~~~e~~~~i~~-~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 643 (653)
||||++++|+++... ||.. .++.+++..++. +.....|. ..++++..+++.||..+|.+||++++|-..
T Consensus 142 Ys~~ii~~ei~~r~~-~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~ 220 (484)
T KOG1023|consen 142 YSFGIIMYEILFRSG-PFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSK 220 (484)
T ss_pred ehHHHHHHHHHhccC-ccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhh
Confidence 999999999998554 6654 344678888877 33222222 345679999999999999999999999887
Q ss_pred HHHHHH
Q psy5539 644 LWNIKR 649 (653)
Q Consensus 644 L~~l~~ 649 (653)
+..+..
T Consensus 221 ~~~~~~ 226 (484)
T KOG1023|consen 221 LLTINK 226 (484)
T ss_pred hhhhcc
Confidence 765543
No 424
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=2.4e-19 Score=175.08 Aligned_cols=139 Identities=19% Similarity=0.155 Sum_probs=108.6
Q ss_pred EeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-------------------------HHHHHHHHHHHHHHhh
Q psy5539 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-------------------------EYLQTDFEREACLLAE 424 (653)
Q Consensus 370 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-------------------------~~~~~~f~~Ei~il~~ 424 (653)
...||+|+||.||+|+.. +++.||||+++.... ......+.+|.+.+.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~------~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 75 (190)
T cd05145 2 NGCISTGKEANVYHARTG------DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKR 75 (190)
T ss_pred CceeecCCCcEEEEEEcC------CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 357999999999999852 568999999875421 0112235689999999
Q ss_pred CCCCccceEEeEEecCCceEEEEeecCCCChHHH-HhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHH
Q psy5539 425 FDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDF-LRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVY 503 (653)
Q Consensus 425 l~HpnIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~-L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~y 503 (653)
+.|+++.....+... ..+|||||++++++... +. ...++..+...++.|++.+|.+
T Consensus 76 l~~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~---------------------~~~~~~~~~~~i~~~l~~~l~~ 132 (190)
T cd05145 76 LYEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLK---------------------DVPLEEEEAEELYEQVVEQMRR 132 (190)
T ss_pred HHhCCCCCceEEEec--CCEEEEEEecCCCchhhhhh---------------------hccCCHHHHHHHHHHHHHHHHH
Confidence 999987554444333 24899999998755432 22 1346778899999999999999
Q ss_pred hhh-CCceecCCCCCCEeEcCCCcEEEeccCccccc
Q psy5539 504 LSD-RKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538 (653)
Q Consensus 504 LH~-~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~ 538 (653)
||+ .||+||||||+|||++ ++.++|+|||++..+
T Consensus 133 lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 133 LYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred HHHhCCEecCCCChhhEEEE-CCCEEEEEcccceec
Confidence 999 9999999999999999 789999999999764
No 425
>KOG4158|consensus
Probab=99.80 E-value=2e-19 Score=183.30 Aligned_cols=259 Identities=21% Similarity=0.259 Sum_probs=175.6
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCC------------------------------ccceEEEEEEccc----c
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKH------------------------------EEFTLVAVKMLKD----E 406 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~------------------------------~~~~~VAVK~l~~----~ 406 (653)
.+..++|++.+.||+|....||.|+++..... ...-+.|||++-. .
T Consensus 153 kFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s 232 (598)
T KOG4158|consen 153 KFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDS 232 (598)
T ss_pred ccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCC
Confidence 34567899999999999999999987531100 0112356665421 1
Q ss_pred ccHHHHHHHHHHH------HH--------Hhh--------CCCCccceEEeEEec-------------------------
Q psy5539 407 ASEYLQTDFEREA------CL--------LAE--------FDHPNIVKLLGVCAV------------------------- 439 (653)
Q Consensus 407 ~~~~~~~~f~~Ei------~i--------l~~--------l~HpnIv~l~g~~~~------------------------- 439 (653)
......+.+-+|. .. .+. -+|||||+++++|.+
T Consensus 233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~ 312 (598)
T KOG4158|consen 233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGA 312 (598)
T ss_pred chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccccc
Confidence 1222222222221 11 111 259999999987632
Q ss_pred --CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 440 --GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 440 --~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
+..+|+||.-.+. +|.+||.. ...+.....-|+.|+++|+.|||.+||.|||||++
T Consensus 313 g~~~tlylvMkrY~~-tLr~yl~~---------------------~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSD 370 (598)
T KOG4158|consen 313 GEPKTLYLVMKRYRQ-TLREYLWT---------------------RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSD 370 (598)
T ss_pred CCCceEEEehhcchh-hHHHHHhc---------------------CCCchHHHHHHHHHHHHHHHHHHHccchhhccccc
Confidence 2367899987765 89999862 23455667788999999999999999999999999
Q ss_pred CEeE--cCCC--cEEEeccCccccccc---c-ccccCCCCCCCccccccchhhccCC------CCCchhHHHHHHHHHHH
Q psy5539 518 NCLI--NDQM--VVKIADFGLSRKMYL---Q-DYYKGDENDAIPVRWMPLESILYNK------YTVESDVWAFGVCLWEI 583 (653)
Q Consensus 518 NILl--~~~~--~vkI~DfGla~~~~~---~-~~~~~~~~~~~t~~y~aPE~~~~~~------~t~ksDVwSlGvvl~el 583 (653)
|||| |+++ .+.|+|||.+---.. . .+....-...|....||||...... -..|+|.|+.|.+.||+
T Consensus 371 NiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEI 450 (598)
T KOG4158|consen 371 NILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEI 450 (598)
T ss_pred ceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHH
Confidence 9998 4444 678999998621100 0 1111112234566789999876432 23689999999999999
Q ss_pred HhCCCCCCCCCCHHHH-HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy5539 584 FSFALQPYYGLTHEEV-VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642 (653)
Q Consensus 584 lt~~~~p~~~~~~~e~-~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 642 (653)
+. ...||++...-.+ .....+.+++..|+.+++.+++++...+++||++|++..-..+
T Consensus 451 fg-~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAAN 509 (598)
T KOG4158|consen 451 FG-RSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAAN 509 (598)
T ss_pred hc-cCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHh
Confidence 96 6678887321110 1113556677888999999999999999999999998765443
No 426
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=1.8e-19 Score=183.64 Aligned_cols=239 Identities=21% Similarity=0.314 Sum_probs=152.4
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc--ccHHHHHHHHHHHHHHhhCCC----------CccceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE--ASEYLQTDFEREACLLAEFDH----------PNIVKL 433 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~--~~~~~~~~f~~Ei~il~~l~H----------pnIv~l 433 (653)
.+...+.||.|+|+.||.+++. +++..+|+|.+.-. ......+++++|.-....+.+ -.++.-
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~-----~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P 87 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDV-----ETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVP 87 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEET-----TTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred EEEEccccccCCceEEEEEEEc-----cCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEee
Confidence 4567788999999999999964 56789999987432 233345567777655555432 122222
Q ss_pred EeEEe---------cCC--------ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHH
Q psy5539 434 LGVCA---------VGK--------PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQ 496 (653)
Q Consensus 434 ~g~~~---------~~~--------~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 496 (653)
++... .+. +.+++|+-+ .+||.+++..... .......+....++.+..|
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~-------------~~~~~~~l~~~arl~lT~Q 153 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFS-------------RAQTHSPLAFAARLSLTVQ 153 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHH-------------HTTTSHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhh-------------cccccchhHHHHHHHHHHH
Confidence 22221 111 346778776 5699888752211 0011223455667888899
Q ss_pred HHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC--------CCC
Q psy5539 497 IASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN--------KYT 568 (653)
Q Consensus 497 ia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--------~~t 568 (653)
+++.+++||+.|++|+||+|+|++++++|.++|+||+....... ... . ...+..|.|||..... .+|
T Consensus 154 ~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~--~~~--~-~~~~~~~~PPe~~~~~~~~~~~~~~~t 228 (288)
T PF14531_consen 154 MIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGT--RYR--C-SEFPVAFTPPELESCAGQFGQNNAPYT 228 (288)
T ss_dssp HHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTE--EEE--G-GGS-TTTS-HHHHHHHTSCHHSEEEE-
T ss_pred HHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCc--eee--c-cCCCcccCChhhhhhhcccCcccceee
Confidence 99999999999999999999999999999999999987754321 111 1 3345679999976442 578
Q ss_pred CchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCC
Q psy5539 569 VESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNR 634 (653)
Q Consensus 569 ~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 634 (653)
.+.|.|+||+++|.|.++.. ||........... .+..+. +.|+.++.||+.+|+++|.+|
T Consensus 229 ~~~DaW~LG~~ly~lWC~~l-Pf~~~~~~~~~~~----~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 229 FATDAWQLGITLYSLWCGRL-PFGLSSPEADPEW----DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHHHHHHHHHHSS--STCCCGGGSTSGG----GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred eccCHHHHHHHHHHHHHccC-CCCCCCccccccc----cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999999999999999765 7765543211111 344566 899999999999999999988
No 427
>KOG0603|consensus
Probab=99.79 E-value=2.4e-20 Score=201.22 Aligned_cols=229 Identities=25% Similarity=0.372 Sum_probs=185.6
Q ss_pred ecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHH-HHHHHHHHHHHHhhCC-CCccceEEeEEecCCceEEEEeec
Q psy5539 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-LQTDFEREACLLAEFD-HPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 373 LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~-~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
+|+|+||.|++++-.+ ....+..+|.|+++...... .+.....|..++...+ ||.+|++.-.+..+...+++++|.
T Consensus 2 lg~g~~gkvfLvrk~~--g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAG--GADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCcCCCcchHHHHHhc--cccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 7999999999976433 33456788888887543211 1113445778888887 999999999999999999999999
Q ss_pred CCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEe
Q psy5539 451 GRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIA 530 (653)
Q Consensus 451 ~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~ 530 (653)
.+|+|...+. ....++..........++-+++++|+.+++|||+|++||+++.+|.+++.
T Consensus 80 rgg~lft~l~--------------------~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~t 139 (612)
T KOG0603|consen 80 RGGDLFTRLS--------------------KEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLT 139 (612)
T ss_pred ccchhhhccc--------------------cCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccC
Confidence 9999987664 33456777778888899999999999999999999999999999999999
Q ss_pred ccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccC
Q psy5539 531 DFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQ 610 (653)
Q Consensus 531 DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~ 610 (653)
|||+++....... ..|+..|||||.+. .....+|.||||++++||++|.. ||.+ ++...|...+ +.
T Consensus 140 dfglske~v~~~~------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~-pf~~----~~~~~Il~~~-~~ 205 (612)
T KOG0603|consen 140 DFGLSKEAVKEKI------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTL-PFGG----DTMKRILKAE-LE 205 (612)
T ss_pred CchhhhHhHhhhh------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCC-CCch----HHHHHHhhhc-cC
Confidence 9999987533221 27899999999988 67789999999999999999655 7766 6666666544 35
Q ss_pred CCCCCcHHHHHHHHHhhccCCCCCCCH
Q psy5539 611 APDNTPDALYDLMKLCWNMKPMNRPSF 637 (653)
Q Consensus 611 ~~~~~~~~l~~li~~cl~~dP~~RPs~ 637 (653)
.|........+++..++.++|..|...
T Consensus 206 ~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 206 MPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 677888899999999999999999754
No 428
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=1.5e-18 Score=168.47 Aligned_cols=186 Identities=14% Similarity=0.084 Sum_probs=134.5
Q ss_pred EEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc---HHHHHHHHHHHHHHhhCC-CCccceEEeEEecCCceE
Q psy5539 369 YVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS---EYLQTDFEREACLLAEFD-HPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 369 ~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~---~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~~~~ 444 (653)
....|++|+||+||.+.. .+..++.+.++.... ......|.+|+++|++|+ |+++++++++ +..+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-------~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~ 74 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-------GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRH 74 (218)
T ss_pred cceeecCCCcceEEEeec-------CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEE
Confidence 456799999999997753 346788777765432 112235889999999995 5889999886 4469
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC-CCCCEeEcC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL-ATRNCLIND 523 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL-kp~NILl~~ 523 (653)
++|||+.|.+|.+.+. . ....++.|++.+|.++|+.||+|||| ||+|||+++
T Consensus 75 lvmeyI~G~~L~~~~~--------------------------~-~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~ 127 (218)
T PRK12274 75 LDRSYLAGAAMYQRPP--------------------------R-GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQE 127 (218)
T ss_pred EEEeeecCccHHhhhh--------------------------h-hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcC
Confidence 9999999988865331 0 11357789999999999999999999 799999999
Q ss_pred CCcEEEeccCccccccccccc----c-C------CCCCCCccccccchhhccC-CCC-CchhHHHHHHHHHHHHhCCCCC
Q psy5539 524 QMVVKIADFGLSRKMYLQDYY----K-G------DENDAIPVRWMPLESILYN-KYT-VESDVWAFGVCLWEIFSFALQP 590 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~~----~-~------~~~~~~t~~y~aPE~~~~~-~~t-~ksDVwSlGvvl~ellt~~~~p 590 (653)
++.++|+|||++......... . . ......++.+++|+....- ..+ ...+.++-|.-+|.++|++..-
T Consensus 128 ~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 128 DGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred CCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 999999999999743211100 0 0 0011235567777654322 333 5678899999999999998865
Q ss_pred CC
Q psy5539 591 YY 592 (653)
Q Consensus 591 ~~ 592 (653)
|.
T Consensus 208 ~~ 209 (218)
T PRK12274 208 WE 209 (218)
T ss_pred cc
Confidence 54
No 429
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=4.2e-17 Score=161.62 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=111.4
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-------HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-------EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-------~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
+.||+|++|.||+|... +..|++|....... ......+.+|++++..++|++|.....++...+..
T Consensus 2 ~~l~~G~~~~vy~~~~~-------~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFL-------GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENF 74 (211)
T ss_pred cccccCceEEEEEEeeC-------CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCC
Confidence 56899999999999853 35688887653211 11234678999999999999988777777777788
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
++||||+++++|.+++.. ... .+..++.+++.+|.+||+.+++|+|++|.|||++
T Consensus 75 ~lv~e~~~G~~L~~~~~~-----------------------~~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~- 129 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINS-----------------------NGM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS- 129 (211)
T ss_pred EEEEEEeCCcCHHHHHHh-----------------------ccH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-
Confidence 999999999999998851 111 7789999999999999999999999999999999
Q ss_pred CCcEEEeccCcccc
Q psy5539 524 QMVVKIADFGLSRK 537 (653)
Q Consensus 524 ~~~vkI~DfGla~~ 537 (653)
++.++|+|||++..
T Consensus 130 ~~~~~liDf~~a~~ 143 (211)
T PRK14879 130 GGKIYLIDFGLAEF 143 (211)
T ss_pred CCCEEEEECCcccC
Confidence 78999999999863
No 430
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=1.1e-17 Score=165.07 Aligned_cols=135 Identities=17% Similarity=0.251 Sum_probs=102.3
Q ss_pred EeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-----CCCccceEEeEEecCC---
Q psy5539 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-----DHPNIVKLLGVCAVGK--- 441 (653)
Q Consensus 370 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-----~HpnIv~l~g~~~~~~--- 441 (653)
.+.||+|+||.||. .+ .+.. .+||++...... ..+++.+|+.+++.+ +||||++++|++..+.
T Consensus 7 ~~~LG~G~~~~Vy~--hp-----~~~~-k~IKv~~~~~~~-~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g 77 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HP-----EDAQ-RCIKIVYHRGDG-GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG 77 (210)
T ss_pred cceecCCCceEEEE--CC-----CCcC-eEEEEEeccccc-hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe
Confidence 35699999999995 32 1223 368887654322 346789999999999 6799999999998763
Q ss_pred c-eEEEEee--cCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHH-HHhhhCCceecCCCCC
Q psy5539 442 P-MCLLFEY--MGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGM-VYLSDRKFVHRDLATR 517 (653)
Q Consensus 442 ~-~~LV~Ey--~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL-~yLH~~~ivHrDLkp~ 517 (653)
. ..+|+|| ..+|+|.++++. ..+++. ..++.|++.++ +|||+++|+||||||+
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~---------------------~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~ 134 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQ---------------------CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQ 134 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHc---------------------ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHH
Confidence 3 3478999 557999999962 123433 35677888777 9999999999999999
Q ss_pred CEeEcC----CCcEEEeccCccc
Q psy5539 518 NCLIND----QMVVKIADFGLSR 536 (653)
Q Consensus 518 NILl~~----~~~vkI~DfGla~ 536 (653)
|||++. +..++|+||+.+.
T Consensus 135 NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 135 NILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred HEEEeccCCCCCcEEEEECCCCc
Confidence 999974 3489999955443
No 431
>KOG1166|consensus
Probab=99.75 E-value=1.3e-17 Score=192.06 Aligned_cols=246 Identities=17% Similarity=0.191 Sum_probs=174.2
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC---CCccceEEeE
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD---HPNIVKLLGV 436 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~---HpnIv~l~g~ 436 (653)
.++....|.+.+.||+|+||+||+|... +++.||+|+-+...... |---.+++.||+ -+-|+.+...
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~------~~~~~alK~e~P~~~WE----fYI~~q~~~RLk~~~~~~~~~~~~a 762 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHS------NGKLVALKVEKPPNPWE----FYICLQVMERLKPQMLPSIMHISSA 762 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecC------CCcEEEEEeecCCCcee----eeehHHHHHhhchhhhcchHHHHHH
Confidence 3555667888999999999999999852 37999999988764431 222233444554 2344444444
Q ss_pred EecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539 437 CAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT 516 (653)
Q Consensus 437 ~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp 516 (653)
+.-.+..+||+||.+.|+|.++++ ....+++.....++.|++..+++||..+|||+||||
T Consensus 763 ~~~~~~S~lv~ey~~~Gtlld~~N--------------------~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKP 822 (974)
T KOG1166|consen 763 HVFQNASVLVSEYSPYGTLLDLIN--------------------TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKP 822 (974)
T ss_pred HccCCcceeeeeccccccHHHhhc--------------------cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCc
Confidence 556677899999999999999986 234578889999999999999999999999999999
Q ss_pred CCEeEc-------CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCC
Q psy5539 517 RNCLIN-------DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ 589 (653)
Q Consensus 517 ~NILl~-------~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~ 589 (653)
+|+||. ++..++|+|||.+..+..-.....-.....|-.+--+|...+..++.+.|.|.|+.+++-|+-|..
T Consensus 823 DNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y- 901 (974)
T KOG1166|consen 823 DNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY- 901 (974)
T ss_pred ceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH-
Confidence 999993 345789999999977643221112233445667888999999999999999999999999997543
Q ss_pred CCCCCCHHHHHHHHHcCCccCCCC----CCcHHH-HHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 590 PYYGLTHEEVVKYIKEGNILQAPD----NTPDAL-YDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 590 p~~~~~~~e~~~~i~~~~~~~~~~----~~~~~l-~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
++ ...|....... .+..++ .+++..+|+.+-..=|...+|...+.+.
T Consensus 902 ----------~q-~~~g~~~~~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~ 953 (974)
T KOG1166|consen 902 ----------ME-VKNGSSWMVKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEV 953 (974)
T ss_pred ----------HH-hcCCcceeccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHH
Confidence 22 33333322222 222333 4577778884444445555555555443
No 432
>KOG1033|consensus
Probab=99.72 E-value=3.2e-18 Score=181.64 Aligned_cols=176 Identities=23% Similarity=0.305 Sum_probs=137.1
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
.+++.|+++...+|.+||+... .....++...+.++.|++.|++| ++.+|||+||.||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~-----------------~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~ 389 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRR-----------------TGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFF 389 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCC-----------------cccccchhHHHHHHHhhccchhh---ccchhhhcccccccc
Confidence 5889999999999999997332 23346778889999999999999 999999999999999
Q ss_pred cCCCcEEEeccCccccccccc----cccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539 522 NDQMVVKIADFGLSRKMYLQD----YYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE 597 (653)
Q Consensus 522 ~~~~~vkI~DfGla~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~ 597 (653)
..+..+||.|||+...+.... .....+...+|..||+||.+.+..|+.++||||||++|+|++..-.. .+...
T Consensus 390 ~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T---~~er~ 466 (516)
T KOG1033|consen 390 SDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFST---QFERI 466 (516)
T ss_pred ccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhcc---HHHHH
Confidence 999999999999987653332 12234567889999999999999999999999999999999972111 12223
Q ss_pred HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHH
Q psy5539 598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640 (653)
Q Consensus 598 e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei 640 (653)
..+..++++.+++....--+.-+.|+.+++.+.|.+||++.+.
T Consensus 467 ~t~~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 467 ATLTDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred HhhhhhhcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 3455566776653222223446789999999999999955443
No 433
>smart00090 RIO RIO-like kinase.
Probab=99.72 E-value=3.2e-17 Score=165.29 Aligned_cols=142 Identities=19% Similarity=0.141 Sum_probs=108.2
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-----------------------HHHHHHHHHHHHHHh
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-----------------------EYLQTDFEREACLLA 423 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-----------------------~~~~~~f~~Ei~il~ 423 (653)
|.+.+.||+|+||.||+|.+. ..++..||+|.++.... ......+.+|+.++.
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~----~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~ 105 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDF----DGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQ 105 (237)
T ss_pred HHhCCeeccCcceeEEEEEec----CCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 667788999999999999721 13568899999874321 012234678999999
Q ss_pred hCCCCc--cceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHH
Q psy5539 424 EFDHPN--IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGM 501 (653)
Q Consensus 424 ~l~Hpn--Iv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL 501 (653)
++.+.. +.++++. ...+|||||+++++|..++. ....+...+...++.||+.+|
T Consensus 106 ~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--------------------~~~~~~~~~~~~i~~qi~~~l 161 (237)
T smart00090 106 RLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--------------------KDVEPEEEEEFELYDDILEEM 161 (237)
T ss_pred HHHhcCCCCCeeeEe----cCceEEEEEecCCccccccc--------------------ccCCcchHHHHHHHHHHHHHH
Confidence 997633 3344443 23589999999988866432 112345566789999999999
Q ss_pred HHhhhCC-ceecCCCCCCEeEcCCCcEEEeccCcccc
Q psy5539 502 VYLSDRK-FVHRDLATRNCLINDQMVVKIADFGLSRK 537 (653)
Q Consensus 502 ~yLH~~~-ivHrDLkp~NILl~~~~~vkI~DfGla~~ 537 (653)
++||+.+ |+||||||+||+++ ++.++|+|||.+..
T Consensus 162 ~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 162 RKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred HHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhc
Confidence 9999999 99999999999999 88999999999864
No 434
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=8.8e-17 Score=157.84 Aligned_cols=131 Identities=18% Similarity=0.171 Sum_probs=104.8
Q ss_pred eecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--c-----HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--S-----EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~-----~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
.||+|+||.||+|... +..|++|...... . ......+.+|++++..++|+++.....++......+
T Consensus 1 ~ig~G~~~~vy~~~~~-------~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-------GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeecC-------CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCE
Confidence 3799999999999853 3678888854321 1 112356789999999999887665555555666779
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
+||||+++++|.+++... . ..++.+++.+|.+||+.+++|+|++|.||+++ +
T Consensus 74 lv~e~~~g~~l~~~~~~~--------------------~-------~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~ 125 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEG--------------------N-------DELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-D 125 (199)
T ss_pred EEEEEECCccHHHHHhhc--------------------H-------HHHHHHHHHHHHHHHHCCeecCCCCcceEEEE-C
Confidence 999999999999987510 0 07899999999999999999999999999999 7
Q ss_pred CcEEEeccCcccc
Q psy5539 525 MVVKIADFGLSRK 537 (653)
Q Consensus 525 ~~vkI~DfGla~~ 537 (653)
+.++++|||+++.
T Consensus 126 ~~~~liDfg~a~~ 138 (199)
T TIGR03724 126 DKLYLIDFGLGKY 138 (199)
T ss_pred CcEEEEECCCCcC
Confidence 8999999999864
No 435
>KOG0606|consensus
Probab=99.71 E-value=2.3e-17 Score=186.23 Aligned_cols=208 Identities=26% Similarity=0.406 Sum_probs=153.3
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM 443 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~ 443 (653)
.++|..++.|..|+||.||.++++ ...+.+|.|+=++. .+.|. ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~-----~trqrfa~kiNkq~-------lilRn--ilt~a~npfvv------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHK-----ETRQRFAMKINKQN-------LILRN--ILTFAGNPFVV------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeecc-----ccccchhhcccccc-------hhhhc--cccccCCccee------------
Confidence 357889999999999999999864 34467777433221 11111 22222333333
Q ss_pred EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539 444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND 523 (653)
Q Consensus 444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~ 523 (653)
||-...++ ..++++.. ++.+++|||+-+|+|||+||+|.||+.
T Consensus 136 ---------gDc~tllk--------------------~~g~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~ 178 (1205)
T KOG0606|consen 136 ---------GDCATLLK--------------------NIGPLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITS 178 (1205)
T ss_pred ---------chhhhhcc--------------------cCCCCcch--------hhHHhHhhccCCeecCCCCCCcceeee
Confidence 45544443 22233322 278899999999999999999999999
Q ss_pred CCcEEEeccCcccccccccc-------------ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCC
Q psy5539 524 QMVVKIADFGLSRKMYLQDY-------------YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQP 590 (653)
Q Consensus 524 ~~~vkI~DfGla~~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p 590 (653)
-|.+|+.|||+++....... .-.+....+|+.|.|||++....|...+|.|++|+|+||.+-|.. |
T Consensus 179 mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcv-p 257 (1205)
T KOG0606|consen 179 MGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCV-P 257 (1205)
T ss_pred cccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeee-e
Confidence 99999999999875421100 012334578999999999999999999999999999999998654 9
Q ss_pred CCCCCHHHHHHHHHcCC--ccCCCCCCcHHHHHHHHHhhccCCCCCC
Q psy5539 591 YYGLTHEEVVKYIKEGN--ILQAPDNTPDALYDLMKLCWNMKPMNRP 635 (653)
Q Consensus 591 ~~~~~~~e~~~~i~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RP 635 (653)
|.+.++++++..+..-. .++-.+..+.+.++++.++++.+|..|.
T Consensus 258 ffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 258 FFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 99999999988875533 3344456789999999999999999996
No 436
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=1.2e-16 Score=180.44 Aligned_cols=135 Identities=22% Similarity=0.268 Sum_probs=108.3
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEE-c-c---cc--ccHHHHHHHHHHHHHHhhCCCCccceEEeEEec
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKM-L-K---DE--ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV 439 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~-l-~---~~--~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~ 439 (653)
+...+.||+|+||+||+|.+.+ ..+++|+ . + .. ......+.+.+|++++..++|++++....++..
T Consensus 335 ~~~~~~iG~G~~g~Vy~~~~~~-------~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~ 407 (535)
T PRK09605 335 KIPDHLIGKGAEADIKKGEYLG-------RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD 407 (535)
T ss_pred cCccceeccCCcEEEEEEeecC-------ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe
Confidence 3456789999999999998643 1223332 1 1 11 111223568899999999999999988877777
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
....++||||+++++|.+++. ....++.+++.+|.+||+.+++||||||+||
T Consensus 408 ~~~~~lv~E~~~g~~L~~~l~----------------------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NI 459 (535)
T PRK09605 408 PEEKTIVMEYIGGKDLKDVLE----------------------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNF 459 (535)
T ss_pred CCCCEEEEEecCCCcHHHHHH----------------------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHE
Confidence 778899999999999999874 2467899999999999999999999999999
Q ss_pred eEcCCCcEEEeccCcccc
Q psy5539 520 LINDQMVVKIADFGLSRK 537 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~ 537 (653)
|+ +++.++|+|||+++.
T Consensus 460 Ll-~~~~~~liDFGla~~ 476 (535)
T PRK09605 460 IV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EE-ECCcEEEEeCccccc
Confidence 99 677999999999974
No 437
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=2.1e-16 Score=155.22 Aligned_cols=136 Identities=18% Similarity=0.180 Sum_probs=105.5
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc---------------------HHHHHHHHHHHHHHhhC
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS---------------------EYLQTDFEREACLLAEF 425 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~---------------------~~~~~~f~~Ei~il~~l 425 (653)
+.+.+.||+|+||.||++... ++..||||+++.... ......+.+|..++..+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 90 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP------DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL 90 (198)
T ss_pred hhcCCccccCcceEEEEEEcC------CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH
Confidence 556788999999999999752 468899998654320 01122467889999999
Q ss_pred CCCc--cceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHH
Q psy5539 426 DHPN--IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVY 503 (653)
Q Consensus 426 ~Hpn--Iv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~y 503 (653)
.|++ +...++ ....++||||+++++|.+... ......++.+++.++.+
T Consensus 91 ~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------------------------~~~~~~~~~~i~~~l~~ 140 (198)
T cd05144 91 YEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV--------------------------LEDPEEVLDEILEEIVK 140 (198)
T ss_pred HHcCCCCCceee----cCCceEEEEEeCCcchhhccc--------------------------cccHHHHHHHHHHHHHH
Confidence 8874 444443 245589999999998865431 02346788999999999
Q ss_pred hhhCCceecCCCCCCEeEcCCCcEEEeccCccccc
Q psy5539 504 LSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538 (653)
Q Consensus 504 LH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~ 538 (653)
+|+.+|+|+||||+||++++++.++|+|||++...
T Consensus 141 lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 141 AYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred HHHCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 99999999999999999999999999999999654
No 438
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.58 E-value=1.7e-14 Score=145.78 Aligned_cols=135 Identities=19% Similarity=0.179 Sum_probs=102.0
Q ss_pred eeec-ccCCeeEEEEEeCCCCCCccceEEEEEEccccc------------cHHHHHHHHHHHHHHhhCCCCcc--ceEEe
Q psy5539 371 RDLG-QGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA------------SEYLQTDFEREACLLAEFDHPNI--VKLLG 435 (653)
Q Consensus 371 ~~LG-~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~------------~~~~~~~f~~Ei~il~~l~HpnI--v~l~g 435 (653)
..|| .|+.|+||.++.. +..++||++.... .......+.+|++++.+|+|++| ++.++
T Consensus 37 ~~lg~~~g~gtv~~v~~~-------~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~ 109 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-------GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIA 109 (239)
T ss_pred ceeecCCCCccEEEEEeC-------CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEe
Confidence 3477 8888999998763 3568888774311 11233567899999999998875 66777
Q ss_pred EEecC-Cc---eEEEEeecCC-CChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCce
Q psy5539 436 VCAVG-KP---MCLLFEYMGR-GDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFV 510 (653)
Q Consensus 436 ~~~~~-~~---~~LV~Ey~~~-gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~iv 510 (653)
+.... .. .++|+||+++ .+|.+++.. ..++.. .+.+|+.+|.+||+.||+
T Consensus 110 ~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~---------------------~~l~~~----~~~~i~~~l~~lH~~GI~ 164 (239)
T PRK01723 110 ARVVRHGLFYRADILIERIEGARDLVALLQE---------------------APLSEE----QWQAIGQLIARFHDAGVY 164 (239)
T ss_pred eeeeecCcceeeeEEEEecCCCCCHHHHHhc---------------------CCCCHH----HHHHHHHHHHHHHHCCCC
Confidence 64432 22 3599999997 699988751 123332 357899999999999999
Q ss_pred ecCCCCCCEeEcCCCcEEEeccCcccc
Q psy5539 511 HRDLATRNCLINDQMVVKIADFGLSRK 537 (653)
Q Consensus 511 HrDLkp~NILl~~~~~vkI~DfGla~~ 537 (653)
||||||.|||++.++.++|+|||.+..
T Consensus 165 HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 165 HADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred CCCCCchhEEEcCCCCEEEEECCCccc
Confidence 999999999999999999999999864
No 439
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=5.5e-15 Score=143.50 Aligned_cols=136 Identities=24% Similarity=0.233 Sum_probs=95.9
Q ss_pred EeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH--HHHHH---------------------HHHHHHHHhhCC
Q psy5539 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE--YLQTD---------------------FEREACLLAEFD 426 (653)
Q Consensus 370 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~--~~~~~---------------------f~~Ei~il~~l~ 426 (653)
.+.||+|+||+||+|... ++..||||+++..... ..... ...|...+.++.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~------~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~ 75 (187)
T cd05119 2 GGPIGTGKEADVYLALDG------DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLY 75 (187)
T ss_pred CcccccccceeEEEEECC------CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHH
Confidence 356999999999999853 4578999988753211 11111 135566666664
Q ss_pred CCc--cceEEeEEecCCceEEEEeecCCCChHHH-HhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHH
Q psy5539 427 HPN--IVKLLGVCAVGKPMCLLFEYMGRGDLNDF-LRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVY 503 (653)
Q Consensus 427 Hpn--Iv~l~g~~~~~~~~~LV~Ey~~~gsL~~~-L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~y 503 (653)
+.. +.+.++. ...++||||++++++... +. .. ... .+...++.+++.++.+
T Consensus 76 ~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~--------------------~~-~~~-~~~~~~~~~~~~~l~~ 129 (187)
T cd05119 76 EAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLK--------------------DV-RLL-EDPEELYDQILELMRK 129 (187)
T ss_pred HcCCCCCceEec----CCCEEEEEEeCCCCccChhhh--------------------hh-hhc-ccHHHHHHHHHHHHHH
Confidence 432 4444443 246899999999654321 11 00 001 5678899999999999
Q ss_pred hhh-CCceecCCCCCCEeEcCCCcEEEeccCccccc
Q psy5539 504 LSD-RKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538 (653)
Q Consensus 504 LH~-~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~ 538 (653)
+|+ .+|+|+||||+||+++ ++.++|+|||.+...
T Consensus 130 lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 130 LYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred HhhccCcCcCCCChhhEEEE-CCcEEEEECcccccc
Confidence 999 9999999999999999 889999999999653
No 440
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=2.8e-14 Score=132.01 Aligned_cols=132 Identities=23% Similarity=0.262 Sum_probs=110.5
Q ss_pred EEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCC--CccceEEeEEecCCceEEE
Q psy5539 369 YVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH--PNIVKLLGVCAVGKPMCLL 446 (653)
Q Consensus 369 ~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~H--pnIv~l~g~~~~~~~~~LV 446 (653)
+++.||+|.++.||+++..+ ..+++|..+.... ...+.+|+.++..++| .++.+++++....+..+++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-------~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v 71 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-------EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLL 71 (155)
T ss_pred cceecccccccceEEEEecC-------CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEE
Confidence 35679999999999998632 5799999876543 4578899999999977 5899999988888889999
Q ss_pred EeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC---CceecCCCCCCEeEcC
Q psy5539 447 FEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR---KFVHRDLATRNCLIND 523 (653)
Q Consensus 447 ~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~ivHrDLkp~NILl~~ 523 (653)
+||++++.+..+ +......++.+++.+|++||.. +++|+|++|+|||+++
T Consensus 72 ~e~~~g~~~~~~---------------------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~ 124 (155)
T cd05120 72 MEWIEGETLDEV---------------------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD 124 (155)
T ss_pred EEecCCeecccC---------------------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC
Confidence 999988655321 4456678899999999999985 6999999999999999
Q ss_pred CCcEEEeccCcccc
Q psy5539 524 QMVVKIADFGLSRK 537 (653)
Q Consensus 524 ~~~vkI~DfGla~~ 537 (653)
++.++++|||+++.
T Consensus 125 ~~~~~l~Df~~~~~ 138 (155)
T cd05120 125 GKILGIIDWEYAGY 138 (155)
T ss_pred CcEEEEEecccccC
Confidence 99999999999863
No 441
>KOG0590|consensus
Probab=99.55 E-value=3e-16 Score=177.33 Aligned_cols=261 Identities=20% Similarity=0.260 Sum_probs=192.7
Q ss_pred CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCC-CCccceEEeEEecCC
Q psy5539 364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFD-HPNIVKLLGVCAVGK 441 (653)
Q Consensus 364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~ 441 (653)
...|.+.+.||+|+|+.|-..... ......+|+|.+.... ..........|..+-..+. |+|++++++.....+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~----~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~ 94 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNS----RDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR 94 (601)
T ss_pred cccccccccccccccchhhhhhhc----CCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCc
Confidence 345667777999999999877642 2334567777765442 3334445556888877887 999999999999999
Q ss_pred ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhh-hCCceecCCCCCCEe
Q psy5539 442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLS-DRKFVHRDLATRNCL 520 (653)
Q Consensus 442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~ivHrDLkp~NIL 520 (653)
..++++||..+|++.+.+. .......+......++.|+..++.|+| ..++.|+|+||+|.+
T Consensus 95 ~~~~~~~~s~g~~~f~~i~------------------~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~ 156 (601)
T KOG0590|consen 95 SYLLSLSYSDGGSLFSKIS------------------HPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSL 156 (601)
T ss_pred ccccccCcccccccccccc------------------cCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccch
Confidence 9999999999999887652 011113455566788999999999999 999999999999999
Q ss_pred EcCCC-cEEEeccCccccccc-cccccCCCCCCC-ccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 521 INDQM-VVKIADFGLSRKMYL-QDYYKGDENDAI-PVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 521 l~~~~-~vkI~DfGla~~~~~-~~~~~~~~~~~~-t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
++.++ ..+++|||+|..... ...........+ ++.|+|||...+. ......|+||.|+++.-+++|.. |+.....
T Consensus 157 l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~-p~~~~~~ 235 (601)
T KOG0590|consen 157 LDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGEL-PWDFPSR 235 (601)
T ss_pred hccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCC-Ccccccc
Confidence 99999 999999999986644 222223334455 8899999998874 45688999999999999999776 4433222
Q ss_pred H--HHHHHHHcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 597 E--EVVKYIKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 597 ~--e~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
. .....+..... ............+++.+++..+|..|.+.+++....|..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~ 290 (601)
T KOG0590|consen 236 KDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLS 290 (601)
T ss_pred ccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccccccc
Confidence 1 11222222211 223345778889999999999999999999988766644
No 442
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.46 E-value=2.1e-12 Score=141.74 Aligned_cols=140 Identities=22% Similarity=0.264 Sum_probs=99.5
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHH--------------------------------------
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ-------------------------------------- 412 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~-------------------------------------- 412 (653)
+.||.|++|.||+|+++ +|+.||||+.++...+...
T Consensus 123 ~plasaSigQVh~A~l~------~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV------DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred cceeeeehhheEEEEec------CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 46999999999999974 4578999998765322111
Q ss_pred -HHHHHHHHHHhhCC----CCccceEEeEE-ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCC
Q psy5539 413 -TDFEREACLLAEFD----HPNIVKLLGVC-AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486 (653)
Q Consensus 413 -~~f~~Ei~il~~l~----HpnIv~l~g~~-~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~ 486 (653)
-+|.+|++.+.+++ |.+-+.+-.++ ......+|||||++|++|.+++.... ...
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-------------------~~~- 256 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-------------------AGL- 256 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-------------------cCC-
Confidence 13556666666652 33333332333 23456799999999999998765210 011
Q ss_pred HHHHHHHHHHHHH-HHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCccccc
Q psy5539 487 TCDLITIALQIAS-GMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538 (653)
Q Consensus 487 ~~~~~~i~~qia~-gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~ 538 (653)
....++.+++. .+..+|..|++|+|++|.||++++++.++++|||++..+
T Consensus 257 --~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 257 --DRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred --CHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 23456666666 478899999999999999999999999999999998754
No 443
>KOG0601|consensus
Probab=99.35 E-value=7.9e-13 Score=143.47 Aligned_cols=255 Identities=19% Similarity=0.165 Sum_probs=186.3
Q ss_pred CCCCeeEEeeecc--cCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhC-CCCccceEEeEEe
Q psy5539 363 PRNDIIYVRDLGQ--GAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEF-DHPNIVKLLGVCA 438 (653)
Q Consensus 363 ~~~~~~~~~~LG~--G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~ 438 (653)
..+.+.+...+|. |.+|.||.++.. ..++...+|+|+-+...+ ......=.+|+..-+.+ .|+|.++....+.
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~---~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e 188 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCT---NSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE 188 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCC---cccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc
Confidence 3445566777899 999999998752 246778899998443222 11122234566666666 4999999999999
Q ss_pred cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHH----HHHHhhhCCceecCC
Q psy5539 439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIAS----GMVYLSDRKFVHRDL 514 (653)
Q Consensus 439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~----gL~yLH~~~ivHrDL 514 (653)
.++..++-+|++. .+|.++.+. ....++...++.+..+..+ ||.++|+.+++|-|+
T Consensus 189 ~~~~lfiqtE~~~-~sl~~~~~~-------------------~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~ 248 (524)
T KOG0601|consen 189 GSGILFIQTELCG-ESLQSYCHT-------------------PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDL 248 (524)
T ss_pred cCCcceeeecccc-chhHHhhhc-------------------ccccCCchhhhhHHhhhhhcccccccccCCCccccccc
Confidence 9999999999886 688877651 2234677788888888888 999999999999999
Q ss_pred CCCCEeEcCC-CcEEEeccCccccccccccccCC---CCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCC
Q psy5539 515 ATRNCLINDQ-MVVKIADFGLSRKMYLQDYYKGD---ENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQP 590 (653)
Q Consensus 515 kp~NILl~~~-~~vkI~DfGla~~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p 590 (653)
||.||+..++ ...+++|||+...+...+..... ....+...|++||.+. +-++..+|+||+|.++.+...+-.+|
T Consensus 249 kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~ 327 (524)
T KOG0601|consen 249 KPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLP 327 (524)
T ss_pred chhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccc
Confidence 9999999999 89999999999877554432211 2225567899999754 57889999999999999998877766
Q ss_pred CCCCCHHHHHHHHHcCCc-cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy5539 591 YYGLTHEEVVKYIKEGNI-LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQT 643 (653)
Q Consensus 591 ~~~~~~~e~~~~i~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 643 (653)
-.+.... ...++.+.+ .+.-+..+.++...+..+++.+|..|++.+.+..+
T Consensus 328 ~~g~~~~--W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 328 SVGKNSS--WSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred cCCCCCC--ccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 6653221 111222221 12223455677779999999999999998877653
No 444
>KOG1266|consensus
Probab=99.32 E-value=1.4e-12 Score=130.91 Aligned_cols=206 Identities=20% Similarity=0.239 Sum_probs=147.2
Q ss_pred HHHhhCCCCccceEEeEEecC-----CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHH
Q psy5539 420 CLLAEFDHPNIVKLLGVCAVG-----KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIA 494 (653)
Q Consensus 420 ~il~~l~HpnIv~l~g~~~~~-----~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 494 (653)
.-|-.+.|-|||++..++.+. ....++.|||..|+|..||+.... ....+......+++
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~----------------~~~a~~~~~wkkw~ 182 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK----------------NQKALFQKAWKKWC 182 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH----------------hhhhhhHHHHHHHH
Confidence 345556799999999998653 357899999999999999985432 33557788888999
Q ss_pred HHHHHHHHHhhh--CCceecCCCCCCEeEcCCCcEEEeccCcccccccccccc--CCCCCCCccccccchhhccCCCCCc
Q psy5539 495 LQIASGMVYLSD--RKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNKYTVE 570 (653)
Q Consensus 495 ~qia~gL~yLH~--~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~t~k 570 (653)
.||+.||.|||+ ..|+|+++.-+-|++..+|-+||.--.-......-.... ......+-++|-+||+-.....+.+
T Consensus 183 tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a 262 (458)
T KOG1266|consen 183 TQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGA 262 (458)
T ss_pred HHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccc
Confidence 999999999996 489999999999999999998875322211111111000 1112334568999998888888999
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539 571 SDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW 645 (653)
Q Consensus 571 sDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~ 645 (653)
+|||+||...+||.-+..+|-.+.+.-++-..+..--+ ...+ ..-+.++.+|++..|..||++++++.|+.
T Consensus 263 ~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~-~len---~lqr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 263 SDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVII-GLEN---GLQRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred hhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhee-eccC---ccccCcCcccccCCCCCCcchhhhhcCce
Confidence 99999999999999888777655443322222221111 0111 11246788999999999999999988763
No 445
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.32 E-value=1.6e-11 Score=136.45 Aligned_cols=146 Identities=17% Similarity=0.208 Sum_probs=93.0
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHH---------------------------------HH
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY---------------------------------LQ 412 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~---------------------------------~~ 412 (653)
+|+. +.||+|++|.||+|+++. +|+.||||++++...+. ..
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~-----~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~ 194 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKD-----NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFE 194 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECC-----CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHH
Confidence 3444 679999999999999742 36889999997652111 11
Q ss_pred H------HHHHHHHHHhhCC----CCccceEEeEEe-cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccC
Q psy5539 413 T------DFEREACLLAEFD----HPNIVKLLGVCA-VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHR 481 (653)
Q Consensus 413 ~------~f~~Ei~il~~l~----HpnIv~l~g~~~-~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~ 481 (653)
+ +|.+|+..+.+++ +.+.+.+=.++. -....+|||||++|++|.++-..... . ..
T Consensus 195 ~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~-g-------------~d 260 (537)
T PRK04750 195 KTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA-G-------------TD 260 (537)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc-C-------------CC
Confidence 1 2445555555542 333343333332 24567899999999999875321000 0 00
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC----cEEEeccCccccc
Q psy5539 482 VPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM----VVKIADFGLSRKM 538 (653)
Q Consensus 482 ~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~----~vkI~DfGla~~~ 538 (653)
...+....+..++.| +...|++|+|+||.||+++.++ .++++|||++..+
T Consensus 261 ~~~la~~~v~~~~~Q-------if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 261 MKLLAERGVEVFFTQ-------VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHHHHHHHHHHHHH-------HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 011222223333333 3468999999999999999888 9999999998754
No 446
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.30 E-value=1.1e-11 Score=118.07 Aligned_cols=127 Identities=17% Similarity=0.130 Sum_probs=95.3
Q ss_pred EeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccc-eEEeEEecCCceEEEEe
Q psy5539 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV-KLLGVCAVGKPMCLLFE 448 (653)
Q Consensus 370 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv-~l~g~~~~~~~~~LV~E 448 (653)
++.|+.|.++.||+++.. +..+++|....... ....+.+|+.++..+.+.+++ +++.+. ....++|||
T Consensus 3 ~~~l~~G~~~~vy~~~~~-------~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e 71 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-------NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITE 71 (170)
T ss_pred eeecCCcccCceEEEEEC-------CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEE
Confidence 466899999999999853 36799999865532 123467899999998766555 444443 334589999
Q ss_pred ecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCc-----eecCCCCCCEeEcC
Q psy5539 449 YMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKF-----VHRDLATRNCLIND 523 (653)
Q Consensus 449 y~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~i-----vHrDLkp~NILl~~ 523 (653)
|+++.++.+.. . ....++.+++++|+.||+.++ +|+|++|.||+++
T Consensus 72 ~i~G~~l~~~~-------------------------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~- 122 (170)
T cd05151 72 FIEGSELLTED-------------------------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD- 122 (170)
T ss_pred ecCCCcccccc-------------------------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-
Confidence 99998764320 0 012456789999999999875 9999999999999
Q ss_pred CCcEEEeccCccc
Q psy5539 524 QMVVKIADFGLSR 536 (653)
Q Consensus 524 ~~~vkI~DfGla~ 536 (653)
++.++++|||.+.
T Consensus 123 ~~~~~liDf~~a~ 135 (170)
T cd05151 123 DGRLWLIDWEYAG 135 (170)
T ss_pred CCeEEEEeccccc
Confidence 6689999999985
No 447
>KOG0601|consensus
Probab=99.27 E-value=4e-12 Score=138.01 Aligned_cols=252 Identities=18% Similarity=0.153 Sum_probs=184.9
Q ss_pred cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHH-HHHHHHHHHHhhC-CCCccceEEeEEec
Q psy5539 362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQ-TDFEREACLLAEF-DHPNIVKLLGVCAV 439 (653)
Q Consensus 362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~-~~f~~Ei~il~~l-~HpnIv~l~g~~~~ 439 (653)
....+|..+..||.|.|+.|++... ...++..+++|.+......... ..-..|+.+...+ .|.++++....+..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~----r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~ 337 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSK----RPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ 337 (524)
T ss_pred eecCCcceeEEccCCccccceeeee----cCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc
Confidence 3456788999999999999999763 2256688999988765432222 2234566666665 58899998888888
Q ss_pred CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
....++-.||++++++...+. ....++....+++..|++.++.++|++.++|+|+||+||
T Consensus 338 ~r~~~ip~e~~~~~s~~l~~~--------------------~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni 397 (524)
T KOG0601|consen 338 LRQGYIPLEFCEGGSSSLRSV--------------------TSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNI 397 (524)
T ss_pred cccccCchhhhcCcchhhhhH--------------------HHHhcCcchhhhhHHHHHhccccccchhhhcccccccce
Confidence 888889999999998877653 123466777889999999999999999999999999999
Q ss_pred eEcCC-CcEEEeccCccccccccccccCCCCCCCccccc--cchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539 520 LINDQ-MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWM--PLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH 596 (653)
Q Consensus 520 Ll~~~-~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~--aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~ 596 (653)
++..+ +..++.|||.+..+.... ......-+++ ++.......+-.+.|++|||..+.|.+++...+..+..
T Consensus 398 ~i~~~~~~~~~~~~~~~t~~~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~- 471 (524)
T KOG0601|consen 398 LISNDGFFSKLGDFGCWTRLAFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ- 471 (524)
T ss_pred eeccchhhhhccccccccccceec-----ccccccccccccchhhccccccccccccccccccccccccCcccCccccc-
Confidence 99886 788999999986532211 1122223444 44455556788999999999999999986655544333
Q ss_pred HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539 597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI 647 (653)
Q Consensus 597 ~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l 647 (653)
...|..+.....+. ...++..+.+.+..+++..||.+.++..+....
T Consensus 472 ---~~~i~~~~~p~~~~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 472 ---SLTIRSGDTPNLPG-LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ---ceeeecccccCCCc-hHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 23344454433333 337788888999999999999999887766544
No 448
>KOG0606|consensus
Probab=99.19 E-value=8.8e-12 Score=141.76 Aligned_cols=253 Identities=19% Similarity=0.237 Sum_probs=184.6
Q ss_pred cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEE
Q psy5539 360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVC 437 (653)
Q Consensus 360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~ 437 (653)
.....+++.+.+.+-+|+++.++.++-.+ .+...++|..+.... ....+...++-.++-..++|-++...-.+
T Consensus 799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~-----sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~ 873 (1205)
T KOG0606|consen 799 YRSSPDGFEITKPSQSGSPSSSFPASPAG-----SGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF 873 (1205)
T ss_pred ccCCCccceecccccCCCCcccccCCccc-----cccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC
Confidence 45667788888999999999999886433 334444444432111 00011223333333334556666655555
Q ss_pred ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539 438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR 517 (653)
Q Consensus 438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~ 517 (653)
....+..|+++|+.+++|...|+.. +..+..-.......+...+++||+..+.|+|++|.
T Consensus 874 ~~rsP~~L~~~~~~~~~~~Skl~~~--------------------~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~ 933 (1205)
T KOG0606|consen 874 PCRSPLPLVGHYLNGGDLPSKLHNS--------------------GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPD 933 (1205)
T ss_pred CCCCCcchhhHHhccCCchhhhhcC--------------------CCcccccccchhHHHHhhhhccccchhhccccccc
Confidence 6678999999999999999888622 23344444556667888999999999999999999
Q ss_pred CEeEcCCCcEEEeccCcccccccc--------------------cc---------ccCCCCCCCccccccchhhccCCCC
Q psy5539 518 NCLINDQMVVKIADFGLSRKMYLQ--------------------DY---------YKGDENDAIPVRWMPLESILYNKYT 568 (653)
Q Consensus 518 NILl~~~~~vkI~DfGla~~~~~~--------------------~~---------~~~~~~~~~t~~y~aPE~~~~~~~t 568 (653)
|.|+..++..+++|||........ .. ........+|+.|.+||...+....
T Consensus 934 ~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hg 1013 (1205)
T KOG0606|consen 934 SLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHG 1013 (1205)
T ss_pred chhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCC
Confidence 999999999999999843322100 00 0112234568889999999999999
Q ss_pred CchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHH
Q psy5539 569 VESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFR 638 (653)
Q Consensus 569 ~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 638 (653)
..+|.|++|++++|.++ |.+|+....++.+++.+..+.. ...+...+.+..+++...+..+|.+|..+.
T Consensus 1014 s~ad~~~~g~~l~e~l~-g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1014 SAADWWSSGVCLFEVLT-GIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccchhhhhhhhhhhhhc-CCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 99999999999999999 6679999999999988877654 334566788999999999999999998765
No 449
>KOG1243|consensus
Probab=99.16 E-value=4.4e-10 Score=123.41 Aligned_cols=164 Identities=20% Similarity=0.233 Sum_probs=122.3
Q ss_pred ccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCc
Q psy5539 393 EEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY 472 (653)
Q Consensus 393 ~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~ 472 (653)
.++.+|.|...+.... .......+-++.|+.+|||||++++..+...+..|||+|-+. -|..+++
T Consensus 35 ~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk------------ 99 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLK------------ 99 (690)
T ss_pred ccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHH------------
Confidence 4556777777765544 344556778899999999999999999999999999999874 4777775
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHHHHHHhh-hCCceecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCC
Q psy5539 473 SSMESSIHRVPQLSTCDLITIALQIASGMVYLS-DRKFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDA 551 (653)
Q Consensus 473 ~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH-~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~ 551 (653)
.+........+.||+.||.||| +.+++|++|.-+.|+|++.|..||++|.++......+. ......
T Consensus 100 -----------~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~ 166 (690)
T KOG1243|consen 100 -----------ELGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLY 166 (690)
T ss_pred -----------HhHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccch
Confidence 1335566778899999999998 56899999999999999999999999988754311110 011111
Q ss_pred CccccccchhhccCCCCCchhHHHHHHHHHHHHhC
Q psy5539 552 IPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSF 586 (653)
Q Consensus 552 ~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~ 586 (653)
.-..|..|+.+.... -..|.|-||+++||++.|
T Consensus 167 ~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 167 LIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 112356666544333 346999999999999986
No 450
>PF01392 Fz: Fz domain; InterPro: IPR020067 The frizzled (fz) domain is an extracellular domain of about 120 amino acids.It was first identified in the alpha-1 chain of type XVIII collagen and in members of the Frizzled family of seven transmembrane (7TM) proteins which act as receptors for secreted Wingless (Wg)/Wnt glycoproteins []. In addition to these proteins, one or two copies of the fz domain are also found [, , , , ] in: The frizbee (Frzb) family; secreted frizzled-like proteins. Smoothened; another 7TM receptor involved in hedgehog signaling. Carboxpeptidase Z (CPZ). Transmembrane serine protease corin. Two receptor tyrosine kinases (RTKs) subfamilies, the Ror family and the muscle-specific kinase (MuSK) family. As the fz domain contains 10 cysteines which are largely conserved, it has also been called cysteine-rich domain (CRD) []. The fz domain also contains several other highly conserved residues, for example, a basic amino acid follows C6, and a conserved proline residues lies four residues C-terminal to C9 []. The crystal structure of a fz domain shows that it is predominantly alpha-helical with all cysteines forming disulphide bonds. In addition to helical regions, two short beta-strands at the N terminus form a minimal beta-sheet with the second beta sheet passing through a knot created by disulphide bonds []. Several fz domains have been shown to be both necessary and sufficient for Wg/Wnt ligand binding, strongly suggesting that the fz domain is a Wg/Wnt interacting domain [, ].; GO: 0005515 protein binding; PDB: 1IJX_E 3HKL_B 1IJY_B 4F0A_A.
Probab=99.15 E-value=1.9e-11 Score=109.27 Aligned_cols=109 Identities=19% Similarity=0.422 Sum_probs=70.4
Q ss_pred cccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCCCCCc
Q psy5539 35 CSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPMSLPL 114 (653)
Q Consensus 35 c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~~~p~ 114 (653)
|++|++..|+.++- +..+|.|......+ .+......+|..+ ++..|++++..+||+++||+|...+..+ +.+.
T Consensus 1 C~pi~~~~C~~~~y-~~t~~pn~~~~~~~--~~~~~~~~~~~~l---~~~~C~~~~~~flC~~~~P~C~~~~~~~-~~~p 73 (116)
T PF01392_consen 1 CEPITLSFCRGLPY-NQTSFPNSLGHQTQ--DEASQQLNAFSTL---VNSGCHPYLRPFLCSLYFPPCDEGGPTP-PLPP 73 (116)
T ss_dssp EEE---GGGTTSS--TEEESSETTTSSSH--HHHHHHHHCCHHH---HCCTSHTTHHHHHHHHHS-BBBSSSSSS-B-EB
T ss_pred CccCChHHhcCCCC-CceEeecccCCcCH--HHHHHHHHHHHHH---hcchhhHHHhhhhhcccCCcCCCCCccc-ccCC
Confidence 89999999999864 44555555532222 1212223346666 4459999999999999999997655433 3889
Q ss_pred ccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCCCCCCCCCCc
Q psy5539 115 CYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELPNCDTLPKYE 162 (653)
Q Consensus 115 C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp~C~~lp~~~ 162 (653)
||+.|+.++. .|..+|..+ +.+....++|+.+|...
T Consensus 74 Cr~~C~~v~~-~C~~~~~~~-----------~~~~~~~~~C~~lP~~~ 109 (116)
T PF01392_consen 74 CRSLCEEVKS-SCSPELENL-----------GLGWPSFLDCSNLPESN 109 (116)
T ss_dssp -HHHHHHHHH-HHHHHHHHT-----------TTTTSGGG-GGGSS-TT
T ss_pred CHHHcccccc-ccHHHHHHh-----------cCCCCCCCCcccCCCCC
Confidence 9999999997 999999762 12334578999999765
No 451
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.14 E-value=7.6e-10 Score=107.56 Aligned_cols=141 Identities=21% Similarity=0.209 Sum_probs=98.1
Q ss_pred eeecccCCeeEEEEEeCCC-CCCccceEEEEEEcccccc-------------------------HHHHHHHHHHHHHHhh
Q psy5539 371 RDLGQGAFGRVFQAKAPGL-LKHEEFTLVAVKMLKDEAS-------------------------EYLQTDFEREACLLAE 424 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~-~~~~~~~~VAVK~l~~~~~-------------------------~~~~~~f~~Ei~il~~ 424 (653)
..||.|--+.||.|...+. .....+..+|||..+.... .......++|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3589999999999974310 0011346899997642110 0111223489999999
Q ss_pred CCC--CccceEEeEEecCCceEEEEeecCCCChHH-HHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHH
Q psy5539 425 FDH--PNIVKLLGVCAVGKPMCLLFEYMGRGDLND-FLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGM 501 (653)
Q Consensus 425 l~H--pnIv~l~g~~~~~~~~~LV~Ey~~~gsL~~-~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL 501 (653)
+.. -++.+.+++ ..-+|||||+.++.+.. .|+ ...++..+...+..+++.+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---------------------d~~~~~~~~~~i~~~i~~~l 137 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---------------------DAKLNDEEMKNAYYQVLSMM 137 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---------------------ccccCHHHHHHHHHHHHHHH
Confidence 853 466666765 56789999997754421 121 11244556678889999999
Q ss_pred HHh-hhCCceecCCCCCCEeEcCCCcEEEeccCcccc
Q psy5539 502 VYL-SDRKFVHRDLATRNCLINDQMVVKIADFGLSRK 537 (653)
Q Consensus 502 ~yL-H~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~ 537 (653)
..| |+.++||+||++.|||+++ +.+.|+|||.+..
T Consensus 138 ~~l~H~~glVHGDLs~~NIL~~~-~~v~iIDF~qav~ 173 (197)
T cd05146 138 KQLYKECNLVHADLSEYNMLWHD-GKVWFIDVSQSVE 173 (197)
T ss_pred HHHHHhCCeecCCCCHHHEEEEC-CcEEEEECCCcee
Confidence 999 8999999999999999974 6799999998854
No 452
>KOG3741|consensus
Probab=99.06 E-value=4.9e-09 Score=111.83 Aligned_cols=228 Identities=11% Similarity=0.125 Sum_probs=162.5
Q ss_pred CeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEe----cCCceEEEEeecCC-
Q psy5539 378 FGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCA----VGKPMCLLFEYMGR- 452 (653)
Q Consensus 378 fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~----~~~~~~LV~Ey~~~- 452 (653)
-.+.||+.. ..+|..+++|+++..... .......-++.++++.|.|||++..++. .+..+++||+|.++
T Consensus 289 ~~Ttyk~~s-----~~DG~~YvLkRlhg~r~~-~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s 362 (655)
T KOG3741|consen 289 SITTYKATS-----NVDGNAYVLKRLHGDRDQ-STNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSS 362 (655)
T ss_pred cceeEeeee-----ccCCceeeeeeecccccc-CcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCC
Confidence 367888874 467889999999533221 1112234578899999999999998875 34578999999986
Q ss_pred CChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEecc
Q psy5539 453 GDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADF 532 (653)
Q Consensus 453 gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~Df 532 (653)
++|.++--...+.... .+ ..........++..+|.++.|++.||.++|+.|+.-+-|.+++||++.+.+++|+.-
T Consensus 363 ~TL~d~~F~~~~~t~~-~n----~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C 437 (655)
T KOG3741|consen 363 PTLYDLYFANPPFTKR-TN----SFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGC 437 (655)
T ss_pred chHHHHHccCCccccc-cc----cccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecc
Confidence 7888765433332200 00 011123456789999999999999999999999999999999999999999999988
Q ss_pred CccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHcCCccCC
Q psy5539 533 GLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV-VKYIKEGNILQA 611 (653)
Q Consensus 533 Gla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~-~~~i~~~~~~~~ 611 (653)
|....+..+. + |-+. --.+-|.=.||.+++.|.+|...-+.....++. .+.|.
T Consensus 438 ~i~Dvl~~d~---------~-------~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~------- 491 (655)
T KOG3741|consen 438 GIMDVLQEDP---------T-------EPLE---SQQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT------- 491 (655)
T ss_pred cceeeecCCC---------C-------cchh---HHhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh-------
Confidence 8876543222 0 1111 124678889999999999987765554444433 33332
Q ss_pred CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q psy5539 612 PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTL 644 (653)
Q Consensus 612 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L 644 (653)
...+.++++++......++++ -++.+++.++
T Consensus 492 -~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 492 -TTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred -hhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 356788999999999988887 6788877654
No 453
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1.8e-09 Score=101.81 Aligned_cols=131 Identities=21% Similarity=0.207 Sum_probs=94.6
Q ss_pred eecccCCeeEEEEEeCCCCCCccceEEEEEE-cccc-cc-----HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539 372 DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKM-LKDE-AS-----EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC 444 (653)
Q Consensus 372 ~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~-l~~~-~~-----~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~ 444 (653)
.+++|+-+.+|.+.+.+ ..+++|. +++. .. .--...-.+|+.++++++--.|-.-+=+..+.....
T Consensus 3 ~i~~GAEa~i~~~~~~g-------~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~ 75 (204)
T COG3642 3 LIKQGAEAIIYLTDFLG-------LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGL 75 (204)
T ss_pred hhhCCcceeEEeeeccC-------cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCE
Confidence 47899999999986643 2355553 2221 11 112334568999999986544443333445667778
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ 524 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~ 524 (653)
|+|||.++..|.+++... ...++..|-.-+.-||..||+|+||.++||++..+
T Consensus 76 I~me~I~G~~lkd~l~~~---------------------------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~ 128 (204)
T COG3642 76 IVMEYIEGELLKDALEEA---------------------------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG 128 (204)
T ss_pred EEEEEeCChhHHHHHHhc---------------------------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC
Confidence 999999999999888611 24566777778888999999999999999999877
Q ss_pred CcEEEeccCcccc
Q psy5539 525 MVVKIADFGLSRK 537 (653)
Q Consensus 525 ~~vkI~DfGla~~ 537 (653)
. +.++||||+..
T Consensus 129 ~-i~~IDfGLg~~ 140 (204)
T COG3642 129 R-IYFIDFGLGEF 140 (204)
T ss_pred c-EEEEECCcccc
Confidence 5 99999999863
No 454
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.03 E-value=1.4e-09 Score=108.12 Aligned_cols=139 Identities=22% Similarity=0.225 Sum_probs=94.9
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCC--CccceEEeEEecC---CceEE
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH--PNIVKLLGVCAVG---KPMCL 445 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~H--pnIv~l~g~~~~~---~~~~L 445 (653)
+.||.|..+.||+++.. ++..+++|.............+.+|++++..+++ .++.+++.+.... +..++
T Consensus 4 ~~l~~G~~n~~~~v~~~------~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~ 77 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG------GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFY 77 (223)
T ss_pred eecCCCccceEEEEEec------CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceE
Confidence 56899999999999753 2467999987654322234468899999999976 4457778776654 25689
Q ss_pred EEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhh--------------------
Q psy5539 446 LFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLS-------------------- 505 (653)
Q Consensus 446 V~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH-------------------- 505 (653)
||||+++.+|.+.+.. ..++..+...++.++++.|..||
T Consensus 78 v~e~i~G~~l~~~~~~---------------------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~ 136 (223)
T cd05154 78 VMERVDGRVLRDRLLR---------------------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLE 136 (223)
T ss_pred EEEEeCCEecCCCCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHH
Confidence 9999999887664310 11222223333333333333333
Q ss_pred ------------------------------------hCCceecCCCCCCEeEcC--CCcEEEeccCccc
Q psy5539 506 ------------------------------------DRKFVHRDLATRNCLIND--QMVVKIADFGLSR 536 (653)
Q Consensus 506 ------------------------------------~~~ivHrDLkp~NILl~~--~~~vkI~DfGla~ 536 (653)
...++|+|+.+.|||+++ ++.+.|+||+.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 137 RQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 235799999999999998 6778999999875
No 455
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.03 E-value=1.4e-08 Score=105.91 Aligned_cols=253 Identities=18% Similarity=0.190 Sum_probs=164.0
Q ss_pred EEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEE-------ecC
Q psy5539 369 YVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVC-------AVG 440 (653)
Q Consensus 369 ~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~-------~~~ 440 (653)
..+.||+|+-+.+|-.- +..--+-|+.+...... +. +.++.|... .||-+-.-+.+= ..+
T Consensus 15 ~gr~LgqGgea~ly~l~--------e~~d~VAKIYh~Pppa~-~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~ 82 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--------EVRDQVAKIYHAPPPAA-QA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRG 82 (637)
T ss_pred CCccccCCccceeeecc--------hhhchhheeecCCCchH-HH---HHHHHhccCCCCcchhhhhcccHHHhhCCCcc
Confidence 34568999999999642 11223345554332221 11 122233333 455433211111 122
Q ss_pred CceEEEEeecCCC-ChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539 441 KPMCLLFEYMGRG-DLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC 519 (653)
Q Consensus 441 ~~~~LV~Ey~~~g-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI 519 (653)
....++|..+++. -+..+++ ........+...|.-+++.++.+|.+.+.||+.|.+-+|+.++|+
T Consensus 83 ~~iGflmP~v~g~~pI~~~y~--------------p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~ 148 (637)
T COG4248 83 KVIGFLMPKVSGKEPIHMIYS--------------PATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSF 148 (637)
T ss_pred ceeEEecccCCCccchhhhcC--------------chhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccce
Confidence 2366777777653 1222221 111223456789999999999999999999999999999999999
Q ss_pred eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539 520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSFALQPYYGL 594 (653)
Q Consensus 520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~ 594 (653)
|+++++.|.|.|-..-..- .+ ........+...|.+||... +-.-+..+|.|.||+++++++-||..||.|.
T Consensus 149 lVsd~~~V~LVdsDsfqi~-~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 149 LVSDDSKVVLVDSDSFQIN-AN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred eeecCceEEEEcccceeec-cC--CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 9999999999986543221 11 11223456677899999765 3355788999999999999999999999874
Q ss_pred C-------HHHHHHHHHcCCc----------cCCC-----CCCcHHHHHHHHHhhcc--CCCCCCCHHHHHHHHHHHHHH
Q psy5539 595 T-------HEEVVKYIKEGNI----------LQAP-----DNTPDALYDLMKLCWNM--KPMNRPSFRTIYQTLWNIKRD 650 (653)
Q Consensus 595 ~-------~~e~~~~i~~~~~----------~~~~-----~~~~~~l~~li~~cl~~--dP~~RPs~~eil~~L~~l~~~ 650 (653)
. +-| ..|-.|.+ .+.| ...++++..|..+|+.. ++.-|||++..+..|..+.++
T Consensus 226 ~~~~~ap~p~E--~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 226 PLISDAPNPLE--TDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred cccCCCCCcch--hhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 2 111 01111111 1112 23568899999999985 356899999999999999888
Q ss_pred hh
Q psy5539 651 LE 652 (653)
Q Consensus 651 l~ 652 (653)
|.
T Consensus 304 L~ 305 (637)
T COG4248 304 LK 305 (637)
T ss_pred hh
Confidence 75
No 456
>KOG3087|consensus
Probab=98.97 E-value=6.9e-09 Score=97.36 Aligned_cols=144 Identities=23% Similarity=0.239 Sum_probs=98.8
Q ss_pred EEeeecccCCeeEEEEEeCCCCCCccceEEEEE-----Ecccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539 369 YVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVK-----MLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK 441 (653)
Q Consensus 369 ~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK-----~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~ 441 (653)
.+..|-+|+-+.|+++.+.| ....|| ..+...- .-...+-.+|++++.+++--.|.--.-++.+..
T Consensus 11 ~l~likQGAEArv~~~~~~G-------e~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSG-------EAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY 83 (229)
T ss_pred cceeeeccceeeEeeeccCC-------ceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC
Confidence 45668899999999998754 444454 2222221 223456778999999986444432222334445
Q ss_pred ceEEEEeecCC-CChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539 442 PMCLLFEYMGR-GDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL 520 (653)
Q Consensus 442 ~~~LV~Ey~~~-gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL 520 (653)
.-.|+|||+++ -++.+|+...-. ..........++..|-+.+.-||..+|+|+||.++||+
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~------------------~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNil 145 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTME------------------DESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNIL 145 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHcc------------------CcccchhHHHHHHHHHHHHHHhhhCCeecccccccceE
Confidence 55789999976 488888863211 11222333678888999999999999999999999999
Q ss_pred EcCCC---cEEEeccCcccc
Q psy5539 521 INDQM---VVKIADFGLSRK 537 (653)
Q Consensus 521 l~~~~---~vkI~DfGla~~ 537 (653)
|..++ .+.++|||++..
T Consensus 146 l~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 146 LRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EecCCCcCceEEEeecchhc
Confidence 96554 458999999853
No 457
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.92 E-value=2.9e-08 Score=101.67 Aligned_cols=132 Identities=10% Similarity=0.062 Sum_probs=94.0
Q ss_pred eEEEEEeCCCCCCccceEEEEEEccccccHHHHH----------HHHHHHHHHhhCCCC--ccceEEeEEec-----CCc
Q psy5539 380 RVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT----------DFEREACLLAEFDHP--NIVKLLGVCAV-----GKP 442 (653)
Q Consensus 380 ~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~----------~f~~Ei~il~~l~Hp--nIv~l~g~~~~-----~~~ 442 (653)
.|+++... ++.+.||+..........+ .+.+|...+.++... .+...+++... ...
T Consensus 37 rvvr~~~~-------g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~ 109 (268)
T PRK15123 37 RTLRFELA-------GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRT 109 (268)
T ss_pred eEEEEEEC-------CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccce
Confidence 35566542 3578888765433221111 377898888888433 33455555543 234
Q ss_pred eEEEEeecCCC-ChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 443 MCLLFEYMGRG-DLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 443 ~~LV~Ey~~~g-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
-+||+|++++- +|.+++.... ....+......++.+++..+.-||+.||+|+||+++|||+
T Consensus 110 s~LVte~l~~~~sL~~~~~~~~------------------~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl 171 (268)
T PRK15123 110 SFIITEDLAPTISLEDYCADWA------------------TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLL 171 (268)
T ss_pred eEEEEeeCCCCccHHHHHHhhc------------------ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEE
Confidence 78999999986 8999885211 1234556777899999999999999999999999999999
Q ss_pred cC-------CCcEEEeccCccc
Q psy5539 522 ND-------QMVVKIADFGLSR 536 (653)
Q Consensus 522 ~~-------~~~vkI~DfGla~ 536 (653)
+. ++.+.++||+.++
T Consensus 172 ~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 172 HLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eccccCCCCCceEEEEECCccc
Confidence 75 4789999999885
No 458
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.82 E-value=3.5e-08 Score=95.51 Aligned_cols=125 Identities=24% Similarity=0.285 Sum_probs=81.6
Q ss_pred eEEEEEeCCCCCCccceEEEEEEcccc-------------------------ccHHHHHHHHHHHHHHhhCCCC--ccce
Q psy5539 380 RVFQAKAPGLLKHEEFTLVAVKMLKDE-------------------------ASEYLQTDFEREACLLAEFDHP--NIVK 432 (653)
Q Consensus 380 ~Vy~a~~~~~~~~~~~~~VAVK~l~~~-------------------------~~~~~~~~f~~Ei~il~~l~Hp--nIv~ 432 (653)
.||.|..+ ++..+|||..+.. .........++|.+.|.++..- ++.+
T Consensus 1 ~Vy~~~~~------~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~ 74 (188)
T PF01163_consen 1 DVYHAIDP------DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPK 74 (188)
T ss_dssp EEEEEEEC------TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--
T ss_pred CEEEEECC------CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCc
Confidence 37888753 4568999976322 1122344577899999999765 4566
Q ss_pred EEeEEecCCceEEEEeecC--CCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHH-hhhCCc
Q psy5539 433 LLGVCAVGKPMCLLFEYMG--RGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVY-LSDRKF 509 (653)
Q Consensus 433 l~g~~~~~~~~~LV~Ey~~--~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~y-LH~~~i 509 (653)
++++ ..-.|||||++ +..+..+.. ..++..+...++.+++..+.. +|..||
T Consensus 75 p~~~----~~~~ivME~I~~~G~~~~~l~~----------------------~~~~~~~~~~~~~~il~~~~~~~~~~gi 128 (188)
T PF01163_consen 75 PYDY----NRNVIVMEYIGEDGVPLPRLKD----------------------VDLSPEEPKELLEEILEEIIKMLHKAGI 128 (188)
T ss_dssp EEEE----ETTEEEEE--EETTEEGGCHHH----------------------CGGGGSTHHHHHHHHHHHHHHHHHCTTE
T ss_pred EEEE----eCCEEEEEecCCCccchhhHHh----------------------ccccchhHHHHHHHHHHHHHHHHHhcCc
Confidence 6655 24579999998 555544332 011134456777888886665 579999
Q ss_pred eecCCCCCCEeEcCCCcEEEeccCcccc
Q psy5539 510 VHRDLATRNCLINDQMVVKIADFGLSRK 537 (653)
Q Consensus 510 vHrDLkp~NILl~~~~~vkI~DfGla~~ 537 (653)
+|+||.+.|||++++ .+.|+|||.+..
T Consensus 129 vHGDLs~~NIlv~~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 129 VHGDLSEYNILVDDG-KVYIIDFGQAVD 155 (188)
T ss_dssp EESS-STTSEEEETT-CEEE--GTTEEE
T ss_pred eecCCChhhEEeecc-eEEEEecCccee
Confidence 999999999999988 999999998864
No 459
>KOG2137|consensus
Probab=98.77 E-value=4.9e-09 Score=115.76 Aligned_cols=150 Identities=19% Similarity=0.224 Sum_probs=108.8
Q ss_pred HHHHHHHHHHhhhC-CceecCCCCCCEeEcCCCcEEEeccCccccccccccccCCC-------CCCCccccccchhhccC
Q psy5539 494 ALQIASGMVYLSDR-KFVHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDE-------NDAIPVRWMPLESILYN 565 (653)
Q Consensus 494 ~~qia~gL~yLH~~-~ivHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~-------~~~~t~~y~aPE~~~~~ 565 (653)
+.+++.||.|+|.. ++||++|.|++|.++.++.+||+.|+.+........+.-.. ...-...|.|||++...
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 34566999999954 89999999999999999999999999876543311111111 11223469999999998
Q ss_pred CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy5539 566 KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV---KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ 642 (653)
Q Consensus 566 ~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~---~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 642 (653)
..+.++|+||+|+++|-++.+|..-+......... ....+........++|.++++=+.+++..++.-||++.++..
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence 99999999999999999997776544433221111 111111223345679999999999999999999998877764
Q ss_pred H
Q psy5539 643 T 643 (653)
Q Consensus 643 ~ 643 (653)
.
T Consensus 265 ~ 265 (700)
T KOG2137|consen 265 I 265 (700)
T ss_pred c
Confidence 3
No 460
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.64 E-value=4.5e-07 Score=89.65 Aligned_cols=105 Identities=21% Similarity=0.174 Sum_probs=82.3
Q ss_pred HHHHHHHHHHhhCCC--CccceEEeEEecCC----ceEEEEeecCC-CChHHHHhhcCCCCCcCCCcccccccccCCCCC
Q psy5539 413 TDFEREACLLAEFDH--PNIVKLLGVCAVGK----PMCLLFEYMGR-GDLNDFLRICSPNNYINGTYSSMESSIHRVPQL 485 (653)
Q Consensus 413 ~~f~~Ei~il~~l~H--pnIv~l~g~~~~~~----~~~LV~Ey~~~-gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l 485 (653)
....+|...+.+|.. -.+.+.+++..... ..+||+|++++ -+|.+++... ..+
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~--------------------~~~ 115 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW--------------------EQL 115 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh--------------------ccc
Confidence 356788887777743 34556666665432 45899999988 4899988621 114
Q ss_pred CHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCC---cEEEeccCcccc
Q psy5539 486 STCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQM---VVKIADFGLSRK 537 (653)
Q Consensus 486 ~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~---~vkI~DfGla~~ 537 (653)
+......++.+++..+.-||+.||+|+|+++.|||++.+. .+.++||+.++.
T Consensus 116 ~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 116 DPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred chhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 5667788999999999999999999999999999999887 899999998764
No 461
>PRK09902 hypothetical protein; Provisional
Probab=98.55 E-value=1.5e-06 Score=84.96 Aligned_cols=139 Identities=16% Similarity=0.112 Sum_probs=100.3
Q ss_pred cccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-----HHHHHHHHHHHHHHhhCCCC--ccceEEeEEecC----Cc
Q psy5539 374 GQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-----EYLQTDFEREACLLAEFDHP--NIVKLLGVCAVG----KP 442 (653)
Q Consensus 374 G~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-----~~~~~~f~~Ei~il~~l~Hp--nIv~l~g~~~~~----~~ 442 (653)
|+||-+-|++....| ..+-+|+-..... ...+..|.+|...+.+|..- .+.+.+...... -.
T Consensus 27 ~rgG~SgV~r~~~~g-------~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~r 99 (216)
T PRK09902 27 RRNGMSGVQCVERNG-------KKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWR 99 (216)
T ss_pred CCCCcceEEEEEeCC-------cEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceE
Confidence 779999999987543 3588887642211 12346789999999998532 244444221121 23
Q ss_pred eEEEEeecCC-CChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539 443 MCLLFEYMGR-GDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI 521 (653)
Q Consensus 443 ~~LV~Ey~~~-gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl 521 (653)
-+||+|-+++ -||.+++... ...+.+......+..+++..+.-||+.|+.|+|+.+.|||+
T Consensus 100 A~LVTe~L~g~~~L~~~l~~~------------------~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll 161 (216)
T PRK09902 100 ALLVTEDMAGFISIADWYAQH------------------AVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYV 161 (216)
T ss_pred EEEEEEeCCCCccHHHHHhcC------------------CcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheee
Confidence 6899997764 6898888521 12345677788999999999999999999999999999999
Q ss_pred cCCCc--EEEeccCcccc
Q psy5539 522 NDQMV--VKIADFGLSRK 537 (653)
Q Consensus 522 ~~~~~--vkI~DfGla~~ 537 (653)
+.++. ++++||.-++.
T Consensus 162 ~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 162 KTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred cCCCCeeEEEEEhhccch
Confidence 86666 99999987754
No 462
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.52 E-value=6.6e-06 Score=91.42 Aligned_cols=140 Identities=19% Similarity=0.262 Sum_probs=93.0
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHH-------------------------------------
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQT------------------------------------- 413 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~------------------------------------- 413 (653)
+.|+.++-|.||+|+++ +|+.||||+.+++..+....
T Consensus 131 ~PiAsASIaQVH~A~L~------sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 131 EPIASASIAQVHRAVLK------SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred CchhhhhHhhheeEEec------CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 45899999999999985 36899999986653322111
Q ss_pred --HHHHHHHHHhhCC-----CCccceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCC
Q psy5539 414 --DFEREACLLAEFD-----HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLS 486 (653)
Q Consensus 414 --~f~~Ei~il~~l~-----HpnIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~ 486 (653)
++.+|+..+.+++ .+++.---=++.-.....|+|||++|..+.+..... ...++
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~-------------------~~g~d 265 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK-------------------SAGID 265 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH-------------------hcCCC
Confidence 2345666666652 233321122233456788999999998888874311 12233
Q ss_pred HHHHHHHHHHHHHH-HHHhhhCCceecCCCCCCEeEcCCCcEEEeccCccccc
Q psy5539 487 TCDLITIALQIASG-MVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538 (653)
Q Consensus 487 ~~~~~~i~~qia~g-L~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~ 538 (653)
.. .++..++.+ +..+-..|++|.|..|.||+++.+|.+.+.|||+...+
T Consensus 266 ~k---~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 266 RK---ELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred HH---HHHHHHHHHHHHHHHhcCccccCCCccceEEecCCcEEEEcCcceecC
Confidence 22 333333332 33344579999999999999999999999999998654
No 463
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.43 E-value=1.5e-06 Score=86.88 Aligned_cols=134 Identities=22% Similarity=0.198 Sum_probs=96.7
Q ss_pred eEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-------------------c--HHHHHHHHHHHHHHhhCC
Q psy5539 368 IYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-------------------S--EYLQTDFEREACLLAEFD 426 (653)
Q Consensus 368 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-------------------~--~~~~~~f~~Ei~il~~l~ 426 (653)
.+...||-|--+.||.|..+ .+..+|||.-+... + ...+...++|.+.|.+|.
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~------~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~ 167 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDP------KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLY 167 (304)
T ss_pred hhccccccCccceEEEEECC------CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhh
Confidence 34577999999999999864 46789999643221 1 122345678999999986
Q ss_pred CC--ccceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHh
Q psy5539 427 HP--NIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYL 504 (653)
Q Consensus 427 Hp--nIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yL 504 (653)
-. .|.+-+++ +.-.+||||+++-.|... +++....-.|+..|+.-+.-+
T Consensus 168 ~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~-------------------------r~~~en~~~il~~il~~~~~~ 218 (304)
T COG0478 168 PEGVKVPKPIAW----NRHAVVMEYIEGVELYRL-------------------------RLDVENPDEILDKILEEVRKA 218 (304)
T ss_pred hcCCCCCCcccc----ccceeeeehcccceeecc-------------------------cCcccCHHHHHHHHHHHHHHH
Confidence 54 66666654 556899999988655421 112334445556666666666
Q ss_pred hhCCceecCCCCCCEeEcCCCcEEEeccCccc
Q psy5539 505 SDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536 (653)
Q Consensus 505 H~~~ivHrDLkp~NILl~~~~~vkI~DfGla~ 536 (653)
-..|+||+|+.+=|||++++|.+.++||--+.
T Consensus 219 ~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 219 YRRGIVHGDLSEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred HHcCccccCCchheEEEecCCCEEEEeCcccc
Confidence 68999999999999999999999999997654
No 464
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.38 E-value=6.7e-06 Score=80.73 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=95.5
Q ss_pred ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHH---------HHHHHHHhhCC---CC
Q psy5539 361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDF---------EREACLLAEFD---HP 428 (653)
Q Consensus 361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f---------~~Ei~il~~l~---Hp 428 (653)
.+..++|...+.+-......|.+-.. ++..+++|..++..... ++.| .+++..+.+++ --
T Consensus 27 ~i~~~~~~~~kv~k~~~r~~ValIei-------~~~kyIlK~pr~~~~r~-er~~~sf~kg~~~~~l~~~~~~i~~~g~~ 98 (229)
T PF06176_consen 27 KILDNNYKIIKVFKNTKRNYVALIEI-------DGKKYILKEPREENRRP-ERRFKSFFKGSEYSRLINNTDKIRNEGFT 98 (229)
T ss_pred HHHhCCceEEEeecCCCccEEEEEEE-------CCcEEEEeccchhhhhH-HHHHHHHhccHHHHHHHHHHHHHHHcCcc
Confidence 34567788888888888888888765 34789999988764332 2222 24444444443 23
Q ss_pred ccceEEeEEec-----CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHH
Q psy5539 429 NIVKLLGVCAV-----GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVY 503 (653)
Q Consensus 429 nIv~l~g~~~~-----~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~y 503 (653)
....++.+... ....+|||||++|..|.++.. ++. .++..++++|.-
T Consensus 99 ~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------------------------i~e----~~~~ki~~~ikq 150 (229)
T PF06176_consen 99 EPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------------------------IDE----DLAEKIVEAIKQ 150 (229)
T ss_pred ccccceeeeeeeeccceeEEEEEEEEecCeecccchh------------------------cCH----HHHHHHHHHHHH
Confidence 33333333322 245679999999988876542 222 245667888999
Q ss_pred hhhCCceecCCCCCCEeEcCCCcEEEeccCccc
Q psy5539 504 LSDRKFVHRDLATRNCLINDQMVVKIADFGLSR 536 (653)
Q Consensus 504 LH~~~ivHrDLkp~NILl~~~~~vkI~DfGla~ 536 (653)
||+.|++|+|..|.|+++++++ ++++||+..+
T Consensus 151 lH~~G~~HGD~hpgNFlv~~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 151 LHKHGFYHGDPHPGNFLVSNNG-IRIIDTQGKR 182 (229)
T ss_pred HHHcCCccCCCCcCcEEEECCc-EEEEECcccc
Confidence 9999999999999999999665 9999998765
No 465
>cd07066 CRD_FZ CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain. CRD_FZ is an essential component of a number of cell surface receptors, which are involved in multiple signal transduction pathways, particularly in modulating the activity of the Wnt proteins, which play a fundamental role in the early development of metazoans. CRD is also found in secreted frizzled related proteins (SFRPs), which lack the transmembrane segment found in the frizzled protein. The CRD domain is also present in the alpha-1 chain of mouse type XVIII collagen, in carboxypeptidase Z, several receptor tyrosine kinases, and the mosaic transmembrane serine protease corin. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. CRD domains have also been identified in multiple tandem copies in a Dictyostelium discoideum protein. Very little is known about the mechanism by which CRD domains interact wit
Probab=98.33 E-value=1.2e-06 Score=78.62 Aligned_cols=109 Identities=19% Similarity=0.386 Sum_probs=72.4
Q ss_pred ccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCCCCC
Q psy5539 34 YCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPMSLP 113 (653)
Q Consensus 34 ~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~~~p 113 (653)
.|+++++..|+.+ ..+ .+++....... .++| .... ...+...++..|++.+..++|+.+||.|...+. .+++
T Consensus 1 ~C~pi~~~~C~~~-~Yn-~t~~pn~~~~~--~~~~-a~~~-~~~~~~l~~~~C~~~~~~f~Cs~~~P~C~~~~~--~~~~ 72 (119)
T cd07066 1 KCEPIPLPLCRGL-PYN-TTRFPNLLGHE--SQEE-AEQE-LESFTPLVNSGCHPDLRFFLCSLYFPECTPDGD--RPIP 72 (119)
T ss_pred CCccCCHHHhCCC-CCC-ceeCCCccCCC--CHHH-HHHH-HHHHHHHHhcCCChhHHHHHHhccCccccCCCC--CcCC
Confidence 4999999999998 443 45554442211 1222 1111 123323588999999999999999999977644 4588
Q ss_pred cccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCCCCCCCCCCc
Q psy5539 114 LCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELPNCDTLPKYE 162 (653)
Q Consensus 114 ~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp~C~~lp~~~ 162 (653)
.||..|+.++ ..|...+..+.. .--..++|+.+|...
T Consensus 73 PCRs~Ceev~-~~C~~~~~~~~~-----------~wp~~~~C~~~p~~~ 109 (119)
T cd07066 73 PCRSLCEEVR-DSCEPLMLAFGF-----------PWPEPLDCDRFPDSN 109 (119)
T ss_pred ChHHHHHHHH-HHHHHHHHHhCC-----------CCCCcCCccccCCCC
Confidence 9999999998 889655433200 011467899998753
No 466
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.23 E-value=1.2e-05 Score=80.63 Aligned_cols=72 Identities=14% Similarity=0.158 Sum_probs=52.9
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCc--cceEEeEEecCCceEEEEe
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN--IVKLLGVCAVGKPMCLLFE 448 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~Hpn--Iv~l~g~~~~~~~~~LV~E 448 (653)
..||+|..+.||+.. +..+++|..+.... .....+|.++++.+..-. +.+.+++....+...+|||
T Consensus 7 ~~i~~G~t~~~y~~~---------~~~~VlR~~~~~~~---~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e 74 (226)
T TIGR02172 7 TQTGEGGNGESYTHK---------TGKWMLKLYNPGFD---KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYE 74 (226)
T ss_pred eeecCCCCcceeEec---------CCCEEEEeCCCCCC---HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeee
Confidence 568999999999831 12467888775432 234688999998886443 4577788777778899999
Q ss_pred ecCCCC
Q psy5539 449 YMGRGD 454 (653)
Q Consensus 449 y~~~gs 454 (653)
+++|.+
T Consensus 75 ~i~G~~ 80 (226)
T TIGR02172 75 LIVGKR 80 (226)
T ss_pred ecCCcc
Confidence 999863
No 467
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.17 E-value=6.2e-06 Score=80.11 Aligned_cols=102 Identities=26% Similarity=0.300 Sum_probs=80.2
Q ss_pred HHHHHHHhhCCC-CccceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHH
Q psy5539 416 EREACLLAEFDH-PNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIA 494 (653)
Q Consensus 416 ~~Ei~il~~l~H-pnIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 494 (653)
..|.-++..+++ +++.+++|+|- .++|.||.+.+++.+.-. ........+|..+.+||
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~-----------------~l~~~~~~~w~~R~~iA 65 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYR-----------------PLSQFLQSPWEQRAKIA 65 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCcccccccc-----------------ccccccccCHHHHHHHH
Confidence 458888888977 69999999984 367899998876642100 00011236899999999
Q ss_pred HHHHHHHHHhhh---CCceecCCCCCCEeEcCCCcEEEeccCccccc
Q psy5539 495 LQIASGMVYLSD---RKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538 (653)
Q Consensus 495 ~qia~gL~yLH~---~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~ 538 (653)
.++++.+++|++ ..+.-.|++++|+-+++++.+|++|...+...
T Consensus 66 ~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 66 LQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred HHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 999999999997 45778999999999999999999999887543
No 468
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.16 E-value=4.3e-05 Score=74.23 Aligned_cols=138 Identities=25% Similarity=0.346 Sum_probs=97.1
Q ss_pred cCccccccccCCCCeeEEeeecccCC-eeEEEEEeCCCCCCccceEEEEEEccc-----------ccc--H-------HH
Q psy5539 353 LNPKLEQLEFPRNDIIYVRDLGQGAF-GRVFQAKAPGLLKHEEFTLVAVKMLKD-----------EAS--E-------YL 411 (653)
Q Consensus 353 ~~~~l~~~e~~~~~~~~~~~LG~G~f-G~Vy~a~~~~~~~~~~~~~VAVK~l~~-----------~~~--~-------~~ 411 (653)
..|+|+....-..++++++.||.|.- |.||+++..| ..+|+|.++. ... + ..
T Consensus 25 ~gPKL~~F~~h~~~I~flefLg~g~~~~~V~kv~I~g-------~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y 97 (207)
T PF13095_consen 25 PGPKLEPFTHHGDDIEFLEFLGHGSHDGYVFKVEIDG-------RIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHY 97 (207)
T ss_pred CCCCcCCcCCCCCcEeeeeecCCCCceeEEEEEEECC-------eEEEEEEeeccccCCCccccccccccccccchhhhh
Confidence 34566665555578999999999999 9999999754 7899999321 000 0 22
Q ss_pred HHHHHHHHHHHhhCC---CCcc--ceEEeEEecC------------------CceEEEEeecCCCChHHHHhhcCCCCCc
Q psy5539 412 QTDFEREACLLAEFD---HPNI--VKLLGVCAVG------------------KPMCLLFEYMGRGDLNDFLRICSPNNYI 468 (653)
Q Consensus 412 ~~~f~~Ei~il~~l~---HpnI--v~l~g~~~~~------------------~~~~LV~Ey~~~gsL~~~L~~~~~~~~~ 468 (653)
...|..|.+...+|+ +.++ |+.+||..-. ....||.||++...
T Consensus 98 ~~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------- 163 (207)
T PF13095_consen 98 ADPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------- 163 (207)
T ss_pred cChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------------
Confidence 346889999988885 4456 8888887322 02345666554421
Q ss_pred CCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEEeccCcc
Q psy5539 469 NGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKIADFGLS 535 (653)
Q Consensus 469 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI~DfGla 535 (653)
.+ ..+-+.+|.+-|..+|..||+-+|+++.|.. .-||+|||.+
T Consensus 164 ---------------~~----~~~~~~~~~~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 164 ---------------PL----QIRDIPQMLRDLKILHKLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred ---------------cc----chhHHHHHHHHHHHHHHCCeeeccCcccccc-----CCEEEecccC
Confidence 11 2234567888889999999999999999986 4488999864
No 469
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.06 E-value=6e-05 Score=75.04 Aligned_cols=78 Identities=22% Similarity=0.329 Sum_probs=55.8
Q ss_pred EeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCC--ccceEEeEEec---CCceE
Q psy5539 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP--NIVKLLGVCAV---GKPMC 444 (653)
Q Consensus 370 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~Hp--nIv~l~g~~~~---~~~~~ 444 (653)
++.|+.|..+.||+....+ ..+++|..... .....+.+|..+++.+... .+.+++..... ....+
T Consensus 2 i~~l~~G~~n~~~~v~~~~-------~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~ 71 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-------GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPY 71 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-------SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEE
T ss_pred CccCCCCCeeeEEEEEECC-------cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccce
Confidence 4678999999999998532 47999997654 3455678888888888533 34566664432 33468
Q ss_pred EEEeecCCCChHH
Q psy5539 445 LLFEYMGRGDLND 457 (653)
Q Consensus 445 LV~Ey~~~gsL~~ 457 (653)
++|+++++..+..
T Consensus 72 ~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 72 LLMEYIPGRPLDD 84 (239)
T ss_dssp EEEEEESSEEHHH
T ss_pred EEEEEeccccccc
Confidence 9999999988877
No 470
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.98 E-value=8.1e-05 Score=75.40 Aligned_cols=75 Identities=13% Similarity=0.096 Sum_probs=51.7
Q ss_pred ecccCC-eeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeEEecCCceEEEEeec
Q psy5539 373 LGQGAF-GRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGVCAVGKPMCLLFEYM 450 (653)
Q Consensus 373 LG~G~f-G~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~~~~LV~Ey~ 450 (653)
|-.|.. ..||+.... +..+.||...... ..++.+|++++..+. +--+.+++++...++..++|||++
T Consensus 6 ~~~g~~~~~v~~~~~~-------~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i 74 (244)
T cd05150 6 VTEGQSGATVYRLDGK-------NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAV 74 (244)
T ss_pred cCCCCCcCeEEEEcCC-------CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEee
Confidence 444555 789998632 2468888876542 234678888888874 334557777777666789999999
Q ss_pred CCCChHHH
Q psy5539 451 GRGDLNDF 458 (653)
Q Consensus 451 ~~gsL~~~ 458 (653)
+|.+|.+.
T Consensus 75 ~G~~l~~~ 82 (244)
T cd05150 75 PGVPAAAL 82 (244)
T ss_pred CCccHhHh
Confidence 99877643
No 471
>KOG1235|consensus
Probab=97.95 E-value=6e-05 Score=83.66 Aligned_cols=139 Identities=20% Similarity=0.267 Sum_probs=89.0
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHH------------------------------------HHH
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYL------------------------------------QTD 414 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~------------------------------------~~~ 414 (653)
+.||..+.|.||+|++++ |..||||+-++.-.+.. .-+
T Consensus 167 ~piaaASlaQVhrA~L~~------G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELD 240 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN------GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELD 240 (538)
T ss_pred chhhhcchhheEEEEecC------CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcc
Confidence 468999999999999853 68899999765432211 112
Q ss_pred HHHHHHHHhhC----CCCc------cceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCC
Q psy5539 415 FEREACLLAEF----DHPN------IVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQ 484 (653)
Q Consensus 415 f~~Ei~il~~l----~Hpn------Iv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (653)
|.+|++-..++ .|-+ |.+++ +.......|+||||+|..+.|.-.- ....
T Consensus 241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy--~~~st~RVLtME~~~G~~i~Dl~~i-------------------~~~g 299 (538)
T KOG1235|consen 241 FTKEAKNAERFRENFKDFSLLTYVLVPKVY--WDLSTKRVLTMEYVDGIKINDLDAI-------------------DKRG 299 (538)
T ss_pred hHHHHHhHHHHHHHHHhcccccceeCCeeh--hhcCcceEEEEEecCCccCCCHHHH-------------------HHcC
Confidence 44555544443 3545 22222 2334578999999999887765321 1123
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC----CCcEEEeccCccccc
Q psy5539 485 LSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND----QMVVKIADFGLSRKM 538 (653)
Q Consensus 485 l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~----~~~vkI~DfGla~~~ 538 (653)
++...+..-+.+...-+ +=..|++|.|-.|-||+++. ++.+.+-|||+...+
T Consensus 300 i~~~~i~~~l~~~~~~q--If~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 300 ISPHDILNKLVEAYLEQ--IFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred CCHHHHHHHHHHHHHHH--HHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 44444333333322222 22468999999999999983 678999999998765
No 472
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.92 E-value=0.00022 Score=71.02 Aligned_cols=138 Identities=20% Similarity=0.230 Sum_probs=91.0
Q ss_pred EeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHH-----------------------HHHHHHHHHHHHhhCC
Q psy5539 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEY-----------------------LQTDFEREACLLAEFD 426 (653)
Q Consensus 370 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~-----------------------~~~~f~~Ei~il~~l~ 426 (653)
.-.|+.|.-+.||+|.. .++..+|||+.+.....- ...-..+|..-|.++.
T Consensus 53 ~g~istGKEA~Vy~a~~------~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~ 126 (268)
T COG1718 53 VGCISTGKEANVYLAET------GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAY 126 (268)
T ss_pred EeeecCCcceEEEeecc------CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34688899999999864 346789999986443210 1112235666666653
Q ss_pred --CCccceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHh
Q psy5539 427 --HPNIVKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYL 504 (653)
Q Consensus 427 --HpnIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yL 504 (653)
+-.+.+-+++ ..-.|||||+...-+ ..| .. +...+...+...+..+++++|.-|
T Consensus 127 eAGVrvP~Pi~~----~~nVLvMEfIg~~g~------pAP-------------~L-kDv~~e~~e~~~~~~~~v~~~~~l 182 (268)
T COG1718 127 EAGVRVPEPIAF----RNNVLVMEFIGDDGL------PAP-------------RL-KDVPLELEEAEGLYEDVVEYMRRL 182 (268)
T ss_pred HcCCCCCCceee----cCCeEEEEeccCCCC------CCC-------------Cc-ccCCcCchhHHHHHHHHHHHHHHH
Confidence 2333333433 234699999965310 000 01 112233336778888999999998
Q ss_pred hh-CCceecCCCCCCEeEcCCCcEEEeccCccccc
Q psy5539 505 SD-RKFVHRDLATRNCLINDQMVVKIADFGLSRKM 538 (653)
Q Consensus 505 H~-~~ivHrDLkp~NILl~~~~~vkI~DfGla~~~ 538 (653)
-. .++||+||..=|||+. ++.+.|+|||-|...
T Consensus 183 ~~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 183 YKEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred HHhcCcccccchhhheEEE-CCeEEEEECcccccc
Confidence 77 8999999999999999 779999999988643
No 473
>cd07448 CRD_FZ4 Cysteine-rich Wnt-binding domain of the frizzled 4 (Fz4) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 4 (Fz4) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and the Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Frizzled 4 (Fz4) activates the Ca(2+)/calmodulin-dependent protein kinase II and protein kinase C of the Wnt/Ca(2+) signaling pathway during retinal angiogenesis. Mutations in Fz4 lead to familial exudative vitreoretinopathy (FEVR
Probab=97.89 E-value=3.2e-05 Score=69.51 Aligned_cols=120 Identities=20% Similarity=0.414 Sum_probs=75.6
Q ss_pred CCccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCCC
Q psy5539 32 QGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPMS 111 (653)
Q Consensus 32 ~g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~~ 111 (653)
.+.|++-+-..|.. |..+...|=|.-.-..+.+.+.++ ..|..| +...|++.+..+||.-+||.|.... +.+
T Consensus 1 ~~~Cepi~~~~C~~-l~Yn~T~~PN~lgh~sq~ea~~~l--~~~~pL---v~~~Csp~l~~flCsl~~P~C~~~~--~~~ 72 (126)
T cd07448 1 DRRCEPIRIEMCQG-LGYNVTRMPNLVGHELQTDAELQL--QTFTPL---IQYGCSSQLKFFLCSVYVPMCTEKV--PVP 72 (126)
T ss_pred CCeeeeCCHHHhCC-CCcccccCCCcCCCcCHHHHHHHH--HHHHHH---hhcCCChhHHhHhhhccccccCCCC--CCc
Confidence 36789988899988 555544443332111122222222 346666 5569999999999999999996533 345
Q ss_pred CCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCC---CCCCCCCCcccCCCCcCCCCCCC
Q psy5539 112 LPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELP---NCDTLPKYEVVNGKPTCSHAQLT 176 (653)
Q Consensus 112 ~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp---~C~~lp~~~~~~~~~~C~~~~~~ 176 (653)
.+-||.-|+.+| .-|. ..++. ..+..| +|+.+|... .....|..++.+
T Consensus 73 i~PCRslCe~vr-~~C~---~~m~~-----------~g~~WP~~l~C~~fP~~~--~~~~~C~~~~~~ 123 (126)
T cd07448 73 IGPCRPLCLSVK-KRCL---PVLKE-----------FGFPWPEALNCSKFPPQN--NHNHMCMEGPGD 123 (126)
T ss_pred CCcCHHHHHHHH-HHHH---HHHHH-----------hCCCCCCcCCcccCCCCC--CCCCccCCCCCc
Confidence 777999999999 6673 22221 122333 799999754 334467655443
No 474
>KOG0576|consensus
Probab=97.88 E-value=2.4e-06 Score=93.79 Aligned_cols=182 Identities=15% Similarity=0.112 Sum_probs=130.1
Q ss_pred CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCc-cceEEeEEecCCce
Q psy5539 365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPN-IVKLLGVCAVGKPM 443 (653)
Q Consensus 365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~Hpn-Iv~l~g~~~~~~~~ 443 (653)
.-+.....+++|++++++|.+.. .+ +....+.+... ....-++++|.+.+||| .+..++-+..+...
T Consensus 242 kws~~fh~fvK~altknpKkRpt-----ae-klL~h~fvs~~------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~ 309 (829)
T KOG0576|consen 242 KWSEFFHNFVKGALTKNPKKRPT-----AE-KLLQHPFVSQT------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYL 309 (829)
T ss_pred cchHHHHHHHHHHhcCCCccCCC-----hh-hheeceeeccc------hhhHHHHHHHHHccCCCCcccccccCCccccc
Confidence 34455667899999999998742 11 23335555433 24456889999999999 77777777778888
Q ss_pred EEEEeecCCC-ChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539 444 CLLFEYMGRG-DLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN 522 (653)
Q Consensus 444 ~LV~Ey~~~g-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~ 522 (653)
+++++++..+ +-..-. ....-.+...+...+.+.-++++++||+..=+|+| |||..
T Consensus 310 ~i~~~i~s~~rs~~~~~-------------------~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s 366 (829)
T KOG0576|consen 310 WIPMRICSTGRSSALEM-------------------TVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS 366 (829)
T ss_pred chhhhhhcCCccccccC-------------------ChhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc
Confidence 9999998776 111100 01112344556667778888999999988778999 77776
Q ss_pred CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHh
Q psy5539 523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFS 585 (653)
Q Consensus 523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt 585 (653)
+ +..+..||+....+.... ......++..|+|||+...+.+....|+|++|+--.++--
T Consensus 367 ~-~~~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap 425 (829)
T KOG0576|consen 367 E-EEVKLLDFAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAP 425 (829)
T ss_pred c-cccccccccCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCC
Confidence 6 688999999987653222 2345567889999999999999999999999975555543
No 475
>PLN02876 acyl-CoA dehydrogenase
Probab=97.85 E-value=0.00015 Score=86.44 Aligned_cols=84 Identities=15% Similarity=0.202 Sum_probs=57.4
Q ss_pred EEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCcc--ceEEeEEecC---Cc
Q psy5539 369 YVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNI--VKLLGVCAVG---KP 442 (653)
Q Consensus 369 ~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnI--v~l~g~~~~~---~~ 442 (653)
-++.|+.|.+..+|+.+..+. .....+++|+............+.+|.++++.+. |.+| .+++.++.+. +.
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~---~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~ 118 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNG---GSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGT 118 (822)
T ss_pred eEEEeCCCCcCceEEEEECCC---CcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCC
Confidence 356789999999999876321 1113567777654322122346889999999995 6665 7778887654 45
Q ss_pred eEEEEeecCCCCh
Q psy5539 443 MCLLFEYMGRGDL 455 (653)
Q Consensus 443 ~~LV~Ey~~~gsL 455 (653)
.++||||+++..+
T Consensus 119 ~flVME~v~G~~~ 131 (822)
T PLN02876 119 AFYIMEYLEGRIF 131 (822)
T ss_pred ceEEEEecCCccc
Confidence 7899999987643
No 476
>KOG1035|consensus
Probab=97.78 E-value=0.00011 Score=86.32 Aligned_cols=200 Identities=17% Similarity=0.169 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHhhCCCCccceEEeEEecCCceE----EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCH
Q psy5539 412 QTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC----LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLST 487 (653)
Q Consensus 412 ~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~----LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 487 (653)
....+.|...+..+.|+|++.++.|-....... +.-|++..-++...+. ....++.
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q--------------------~v~~i~~ 285 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ--------------------SVGSIPL 285 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh--------------------hccccCH
Confidence 344566788888999999999998876543332 3345666666666654 3355778
Q ss_pred HHHHHHHHHHHHHHHHhhhCCceecCCCCC---CEeEcCCCcEEEe--ccCccccccccccccCCCCCCCccccccchhh
Q psy5539 488 CDLITIALQIASGMVYLSDRKFVHRDLATR---NCLINDQMVVKIA--DFGLSRKMYLQDYYKGDENDAIPVRWMPLESI 562 (653)
Q Consensus 488 ~~~~~i~~qia~gL~yLH~~~ivHrDLkp~---NILl~~~~~vkI~--DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~ 562 (653)
...+.+..++.+||.|+|+....|.-|..+ +...+..+.+.++ ||+.++....... ......+..+.++|..
T Consensus 286 ~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~---~~~~~~~~~~~~~e~~ 362 (1351)
T KOG1035|consen 286 ETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK---SFSDLLAEIRNADEDL 362 (1351)
T ss_pred HHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCccc---chhhcCcccccccccc
Confidence 888889999999999999997766666555 4555666777777 8988876533222 1222334457788877
Q ss_pred ccCCCCC--chhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHH
Q psy5539 563 LYNKYTV--ESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTI 640 (653)
Q Consensus 563 ~~~~~t~--ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei 640 (653)
..+.++. ..|+|.+|.++..+..+...+-.......+.. ......+.+...+|+..++++|++..++
T Consensus 363 ~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~~l~-----------~~~~~~~~d~~~~~~~~~~~~Rl~~~~l 431 (1351)
T KOG1035|consen 363 KENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAVPVSLLD-----------VLSTSELLDALPKCLDEDSEERLSALEL 431 (1351)
T ss_pred ccccchhhhhhHHHHHHHHHhhhhhcCcccccccchhhhhc-----------cccchhhhhhhhhhcchhhhhccchhhh
Confidence 7666554 47999999999999886654433222222111 1122267888889999999999999999
Q ss_pred HHHHH
Q psy5539 641 YQTLW 645 (653)
Q Consensus 641 l~~L~ 645 (653)
+.+.+
T Consensus 432 l~~~f 436 (1351)
T KOG1035|consen 432 LTHPF 436 (1351)
T ss_pred hhchh
Confidence 98865
No 477
>cd07463 CRD_FZ9 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 9 (Fz9) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 9 (Fz9) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Fz9 may play a signaling role in lymphoid development and maturation, particularly at points where B cells undergo self-renewal prior to further differentiation.
Probab=97.78 E-value=7.1e-05 Score=67.19 Aligned_cols=118 Identities=19% Similarity=0.392 Sum_probs=76.1
Q ss_pred CCCccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHH-HHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCC
Q psy5539 31 PQGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQI-VMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIP 109 (653)
Q Consensus 31 ~~g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~-~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~ 109 (653)
.++.|++-.=..|..+ ..+.. .|..... -..++|.. ....|.-| +...|++...-+||..+||.|.... +
T Consensus 1 ~~~~CepI~~~~C~~l-~Yn~T-~~PN~lg--h~sq~ea~~~~~~f~pL---v~~~Csp~l~~FlCS~~~P~C~~~~--~ 71 (127)
T cd07463 1 RAAKCQPVVIPMCRGI-GYNLT-RMPNFLG--HDSQREAAIKLNEFAPL---VEYGCHVHLRFFLCSLYAPMCTDQV--S 71 (127)
T ss_pred CCCccccCChhhhCCC-CcCcc-cCCcccC--CcCHHHHHHHHHHHHHH---HhcCCChhhHHHhhhccccccCCCC--C
Confidence 3678999999999984 54444 4444322 11222221 22235555 7789999999999999999996543 3
Q ss_pred CCCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCC---CCCCCCCCcccCCCCcCCCCC
Q psy5539 110 MSLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELP---NCDTLPKYEVVNGKPTCSHAQ 174 (653)
Q Consensus 110 ~~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp---~C~~lp~~~~~~~~~~C~~~~ 174 (653)
.+.|-||.-|+.+| .-|... ++. ..+..| +|+.+|... .....|..++
T Consensus 72 ~~i~PCRslCe~vr-~~C~~~---m~~-----------fg~~WP~~l~C~~fP~~~--~~~~~C~~~~ 122 (127)
T cd07463 72 TSIPACRPMCEQAR-QKCSPI---MEQ-----------FNFGWPESLDCSRLPTRN--DPNALCMEAP 122 (127)
T ss_pred CcCCccHHHHHHHH-HHHHHH---HHH-----------hCCCCCCcCChhhCCCCC--CCCcccCCCC
Confidence 44777999999999 667322 221 123444 799999765 3344676544
No 478
>cd07462 CRD_FZ10 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 10 (Fz10) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 10 (Fz10) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. The cellular functon of Fz10 is unknown.
Probab=97.74 E-value=0.00011 Score=66.02 Aligned_cols=117 Identities=21% Similarity=0.428 Sum_probs=75.0
Q ss_pred CCccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHH-HHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCC
Q psy5539 32 QGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQ-IVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPM 110 (653)
Q Consensus 32 ~g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~ 110 (653)
.|.|++-+=..|+.+ ..+. ..|..... -..+.|- +....|.-| +...|++.+.-+||.-+||.|.... +.
T Consensus 2 ~~~C~pI~~~~C~~l-~Yn~-T~~PN~lg--H~~q~ea~~~~~~f~pL---v~~~C~p~l~~FlCsl~~P~C~~~~--~~ 72 (127)
T cd07462 2 EGRCQPIEIPMCKDI-GYNM-TRMPNLMG--HENQREAAIQLHEFAPL---VEYGCHSHLKFFLCSLYAPMCTEQV--ST 72 (127)
T ss_pred CCeeeecChhhhCCC-CcCc-eeCCcccC--CcCHHHHHHHHHHHHHH---hccCCChhhHHHHHhccccccCCCC--CC
Confidence 588999999999984 4444 44444322 1122221 222234444 7799999999999999999996532 34
Q ss_pred CCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCC---CCCCCCCCcccCCCCcCCCCC
Q psy5539 111 SLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELP---NCDTLPKYEVVNGKPTCSHAQ 174 (653)
Q Consensus 111 ~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp---~C~~lp~~~~~~~~~~C~~~~ 174 (653)
+.|-||.-|+.+| .-|.... + + ..+..| +|+.+|... +....|...+
T Consensus 73 ~i~PCRslCe~vr-~~C~~~m---~---~--------~g~~WP~~l~C~~fP~~~--~~~~lc~~~~ 122 (127)
T cd07462 73 PIPACRVMCEQAR-LKCSPIM---E---Q--------FNFKWPDSLDCSKLPNKN--DPNYLCMEAP 122 (127)
T ss_pred cCCccHHHHHHHH-HHHHHHH---H---H--------hCCCCCCcCCcccCCCCC--CCCcccCCCC
Confidence 4667999999999 6774332 1 1 123444 899999765 2234566443
No 479
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.74 E-value=0.00015 Score=68.37 Aligned_cols=129 Identities=20% Similarity=0.269 Sum_probs=89.1
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccc-eEEeEEecCCceE
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV-KLLGVCAVGKPMC 444 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv-~l~g~~~~~~~~~ 444 (653)
.....+.||+|.+|.||++.+.+ ..+|+|+-+.++. +..++.|+++|..+.-.++. +++.+. .-+
T Consensus 23 ~~~v~~~L~KG~~s~Vyl~~~~~-------~~~a~Kvrr~ds~---r~~l~kEakiLeil~g~~~~p~vy~yg----~~~ 88 (201)
T COG2112 23 ELRVEKELAKGTTSVVYLGEWRG-------GEVALKVRRRDSP---RRNLEKEAKILEILAGEGVTPEVYFYG----EDF 88 (201)
T ss_pred hhhhhhhhhcccccEEEEeeccC-------ceEEEEEecCCcc---hhhHHHHHHHHHHhhhcCCCceEEEec----hhh
Confidence 44566779999999999999854 4799998876544 45788999999998876665 344442 223
Q ss_pred EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC-C-CCEeEc
Q psy5539 445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA-T-RNCLIN 522 (653)
Q Consensus 445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk-p-~NILl~ 522 (653)
+.|||+.|-.|.+.-. ..+.. -...+++.---|-..||-|..|. | .||+++
T Consensus 89 i~me~i~G~~L~~~~~-----------------------~~~rk----~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~ 141 (201)
T COG2112 89 IRMEYIDGRPLGKLEI-----------------------GGDRK----HLLRVLEKAYKLDRLGIEHGELSRPWKNVLVN 141 (201)
T ss_pred hhhhhhcCcchhhhhh-----------------------cccHH----HHHHHHHHHHHHHHhccchhhhcCCceeEEec
Confidence 4599999888876543 01222 23345555444556688888876 3 455555
Q ss_pred CCCcEEEeccCccc
Q psy5539 523 DQMVVKIADFGLSR 536 (653)
Q Consensus 523 ~~~~vkI~DfGla~ 536 (653)
+ +.+.|+||..|+
T Consensus 142 ~-~~~~iIDFd~At 154 (201)
T COG2112 142 D-RDVYIIDFDSAT 154 (201)
T ss_pred C-CcEEEEEccchh
Confidence 4 499999999886
No 480
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.71 E-value=0.00052 Score=67.13 Aligned_cols=128 Identities=19% Similarity=0.298 Sum_probs=88.3
Q ss_pred eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc---------------cHHHHHHHHHHHHHHhhCC------CCc
Q psy5539 371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA---------------SEYLQTDFEREACLLAEFD------HPN 429 (653)
Q Consensus 371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~---------------~~~~~~~f~~Ei~il~~l~------Hpn 429 (653)
..||+|+.-.||.- + ......||+.+... .....++..+|+.-...+. +.+
T Consensus 7 ~~i~~G~~R~cy~H--P------~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~ 78 (199)
T PF10707_consen 7 DLIAQGGERDCYQH--P------DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSH 78 (199)
T ss_pred cccccCCCceEEEC--C------CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccc
Confidence 45899999999952 2 22457788877654 1112345667776666655 889
Q ss_pred cceEEeEEecCCceEEEEeecCC------CChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHH
Q psy5539 430 IVKLLGVCAVGKPMCLLFEYMGR------GDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVY 503 (653)
Q Consensus 430 Iv~l~g~~~~~~~~~LV~Ey~~~------gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~y 503 (653)
|.+++|+...+.-..+|+|.+.+ -+|.++++ ...++. .+...+-+-..|
T Consensus 79 i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~---------------------~~~~~~----~~~~~L~~f~~~ 133 (199)
T PF10707_consen 79 IPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLK---------------------EGGLTE----ELRQALDEFKRY 133 (199)
T ss_pred cccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHH---------------------cCCccH----HHHHHHHHHHHH
Confidence 99999999999999999998643 24556654 123444 233444455677
Q ss_pred hhhCCceecCCCCCCEeEcCCC----cEEEec
Q psy5539 504 LSDRKFVHRDLATRNCLINDQM----VVKIAD 531 (653)
Q Consensus 504 LH~~~ivHrDLkp~NILl~~~~----~vkI~D 531 (653)
|-+.+|+.+||+|.||++..+. .+.|+|
T Consensus 134 l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 134 LLDHHIVIRDLNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred HHHcCCeecCCCcccEEEEecCCCceEEEEEe
Confidence 8889999999999999996332 567776
No 481
>cd07457 CRD_FZ9_like Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 9. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 9 (Fz9) and frizzled 10 (Fz10) receptors, and similar proteins. This domain is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. Very little is known about the mechanism by which CRD domains interact with their ligands. The domain contains 10 conserved cysteines.
Probab=97.70 E-value=0.0001 Score=65.77 Aligned_cols=106 Identities=21% Similarity=0.456 Sum_probs=68.2
Q ss_pred CccccCccchhhhhhcCCCeEEEcCCCcCCcccHHH-HHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCCC
Q psy5539 33 GYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNE-QIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPMS 111 (653)
Q Consensus 33 g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~~ 111 (653)
|.|++-+-..|..+ ..+. ..|..... -..++| ......|.-| +...|++.+..+||.-+||.|.... +.+
T Consensus 1 ~~CepI~~~~C~~l-~Yn~-T~~PN~lg--h~~q~ea~~~~~~~~pL---v~~~Csp~l~~FlCsl~~P~C~~~~--~~~ 71 (121)
T cd07457 1 GKCERITIPMCQGI-GYNM-TRMPNLLG--HESQSEAAISIHEFAPL---VQYGCAEHLRFFLCSLYAPMCTEQV--SIP 71 (121)
T ss_pred CcCccCChHhhCCC-CCCc-eeCCCcCC--CcCHHHHHHHHHHHHHH---HhcCCChhHHHHhhhccCcccCCCC--CCc
Confidence 67999998999884 5443 45544321 112222 1122235555 6679999999999999999996532 345
Q ss_pred CCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCC---CCCCCCCCCc
Q psy5539 112 LPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFEL---PNCDTLPKYE 162 (653)
Q Consensus 112 ~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~l---p~C~~lp~~~ 162 (653)
.+-||.-|+.+| .-|... ++.- .+.. -+|+.+|...
T Consensus 72 i~PCRslCe~vr-~~C~~~---m~~~-----------g~~WP~~l~C~~fP~~~ 110 (121)
T cd07457 72 IPACRSMCEQAR-DKCSPI---MEQF-----------SFSWPDSLDCDRLPRKN 110 (121)
T ss_pred CCccHHHHHHHH-HHHHHH---HHHh-----------CCCCCCcCCcccCCCCC
Confidence 777999999999 677432 2211 1222 3799999754
No 482
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.61 E-value=0.00046 Score=69.58 Aligned_cols=73 Identities=11% Similarity=0.168 Sum_probs=45.2
Q ss_pred eeecccCCe-eEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCC---ccceEEeEEecC---Cce
Q psy5539 371 RDLGQGAFG-RVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP---NIVKLLGVCAVG---KPM 443 (653)
Q Consensus 371 ~~LG~G~fG-~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~Hp---nIv~l~g~~~~~---~~~ 443 (653)
+.|+.|+.. .||+.. ..+++|..+... ....+.+|.+++..+... -+.+.++..... ...
T Consensus 3 ~~~~~gG~~n~vy~~~----------~~~VlR~~~~~~---~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~ 69 (235)
T cd05155 3 EPVDSGGTDNATFRLG----------DDMSVRLPSAAG---YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWP 69 (235)
T ss_pred eeccCCCcccceEEcC----------CceEEEcCCccc---hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcc
Confidence 457777766 599752 236677765432 234688999999887532 233444443322 234
Q ss_pred EEEEeecCCCChH
Q psy5539 444 CLLFEYMGRGDLN 456 (653)
Q Consensus 444 ~LV~Ey~~~gsL~ 456 (653)
++|||+++|.++.
T Consensus 70 ~~l~~~i~G~~l~ 82 (235)
T cd05155 70 WSVYRWLEGETAT 82 (235)
T ss_pred eEEEEeecCCCCC
Confidence 8899999987764
No 483
>cd07461 CRD_FZ8 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 8 (Fz8) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 8 (Fz8) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Xenopus Fz8 is important in Wnt/beta-catenin signaling pathways controlling the transcriptional activation of target genes Siamois and Xnr3 in the animal caps of late blastula.
Probab=97.47 E-value=0.00032 Score=62.90 Aligned_cols=115 Identities=19% Similarity=0.342 Sum_probs=73.3
Q ss_pred CCccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHH-HHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCC
Q psy5539 32 QGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQI-VMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPM 110 (653)
Q Consensus 32 ~g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~-~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~ 110 (653)
.+.|++-+=..|+.+ ..+...|-|.-.- ..++|.. ....|.-| +...|++.+.-+||.-+||.|.+... .
T Consensus 2 ~~~C~pI~~~~C~~l-~Yn~T~~PN~l~H---~sq~ea~~~~~~f~pL---v~~~Csp~l~~FlCSl~~P~C~~~~~--~ 72 (125)
T cd07461 2 ELQCQEITVPLCKGI-GYNYTYMPNQFNH---DTQDEAGLEVHQFWPL---VEIQCSPDLKFFLCSMYTPICLEDYK--K 72 (125)
T ss_pred CCcccccCHHHhCCC-CCCcccCCCccCC---CCHHHHHHHHHHHHHH---HhCCCChhHHHHhhhccCcccCCCCC--C
Confidence 467999998899875 5554544444321 1223221 22235555 66799999999999999999965433 4
Q ss_pred CCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCC---CCCCCCCCCcccCCCCcCCC
Q psy5539 111 SLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFEL---PNCDTLPKYEVVNGKPTCSH 172 (653)
Q Consensus 111 ~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~l---p~C~~lp~~~~~~~~~~C~~ 172 (653)
+.+-||.-|+.+| .-|.. .++. .++.. -+|+.+|... +....|..
T Consensus 73 ~i~PCRslCe~vr-~~C~~---~m~~-----------~g~~WP~~l~C~~fP~~~--~~~~~C~~ 120 (125)
T cd07461 73 PLPPCRSVCERAK-AGCAP---LMRQ-----------YGFPWPDRMRCDLLPEQG--NPDTLCMD 120 (125)
T ss_pred cCCccHHHHHHHH-HHHHH---HHHH-----------hCCCCCCcCChhhCCCCC--CCCCccCC
Confidence 4777999999999 66732 2221 12233 4799999765 22345653
No 484
>smart00063 FRI Frizzled. Drosophila melanogaster frizzled mediates signalling that polarises a precursor cell along the anteroposterior axis. Homologues of the N-terminal region of frizzled exist either as transmembrane or secreted molecules. Frizzled homologues are reported to be receptors for the Wnt growth factors. (Not yet in MEDLINE: the FRI domain occurs in several receptor tyrosine kinases [Xu, Y.K. and Nusse, Curr. Biol. 8 R405-R406 (1998); Masiakowski, P. and Yanopoulos, G.D., Curr. Biol. 8, R407 (1998)].
Probab=97.46 E-value=0.00022 Score=62.96 Aligned_cols=104 Identities=20% Similarity=0.337 Sum_probs=64.6
Q ss_pred cccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCCCCCc
Q psy5539 35 CSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPMSLPL 114 (653)
Q Consensus 35 c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~~~p~ 114 (653)
|++-+-..|+.. ..+...|=|.-.-..+.+.+ .....|..| +...|++.+..+||.-+||.|.+.+. +.+-
T Consensus 1 C~pi~~~~C~~l-~Yn~T~~PN~l~h~~q~ea~--~~l~~~~~L---~~~~C~p~l~~flCsl~~P~C~~~~~---~~~P 71 (113)
T smart00063 1 CEPITIPLCKDL-GYNLTSMPNLLGHTTQEEAG--LELEQFHPL---LNVQCSPDLRFFLCSVYAPICTEDLR---PILP 71 (113)
T ss_pred CcCCCcHhHCCC-CcccccCCCccCCCCHHHHH--HHHHHHHhh---ccCCCChhHHHHhHhccCcccCCCCC---cCCc
Confidence 556666778764 34444443432221121222 223456777 44569999999999999999976443 5777
Q ss_pred ccchhhhhhhccchhHHHHHHhhhccccccccCCCcCC---CCCCCCCCCc
Q psy5539 115 CYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFEL---PNCDTLPKYE 162 (653)
Q Consensus 115 C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~l---p~C~~lp~~~ 162 (653)
||.-|+.+| .-|.... +.. .+.. -+|+.+|...
T Consensus 72 CRs~Ce~vr-~~C~~~~---~~~-----------g~~WP~~l~C~~fP~~~ 107 (113)
T smart00063 72 CRSLCEAAR-EGCEPLM---EKF-----------GFPWPEFLRCDRFPVQE 107 (113)
T ss_pred CHHHHHHHH-HHHHHHH---HHh-----------CCCCCCcCCcccCCCCC
Confidence 999999999 7774332 111 1233 3899998753
No 485
>PRK10593 hypothetical protein; Provisional
Probab=97.45 E-value=0.0022 Score=67.17 Aligned_cols=79 Identities=14% Similarity=0.148 Sum_probs=56.2
Q ss_pred eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCC---CccceEEeEEec---C
Q psy5539 367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH---PNIVKLLGVCAV---G 440 (653)
Q Consensus 367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~H---pnIv~l~g~~~~---~ 440 (653)
+.-.+.||.|..+.||+.... + ..+.+|..+.... ...|..|.+.|+.|.- ..+.++++++.. .
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~------~-~~~~~k~~~~~~~---~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~ 85 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDS------Q-GNPMPLMARSFST---PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSP 85 (297)
T ss_pred hheeeecCCccceeEEEEEcC------C-CCEEEEEeccccc---chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcC
Confidence 345677999999999997642 1 2366677543211 2367899999988853 367788888754 3
Q ss_pred CceEEEEeecCCCCh
Q psy5539 441 KPMCLLFEYMGRGDL 455 (653)
Q Consensus 441 ~~~~LV~Ey~~~gsL 455 (653)
+..+||||+++++++
T Consensus 86 g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 86 GPDVLLLERLRGVSV 100 (297)
T ss_pred CCeEEEEeccCCEec
Confidence 668999999998765
No 486
>cd07888 CRD_corin_2 One of two cysteine-rich domains of the corin protein, a type II transmembrane serine protease . The cysteine-rich domain (CRD) is an essential component of corin, a type II transmembrane serine protease which functions as the convertase of the pro-atrial natriuretic peptide (pro-ANP) in the heart. Corin contains two CRDs in its extracellular region, which play an important role in recognition of the physiological substrate, pro-ANP. This model characterizes the second (C-terminal) CRD.
Probab=97.37 E-value=0.00044 Score=61.73 Aligned_cols=114 Identities=18% Similarity=0.356 Sum_probs=68.5
Q ss_pred cccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCCCCCc
Q psy5539 35 CSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPMSLPL 114 (653)
Q Consensus 35 c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~~~p~ 114 (653)
|++-+=..|.. +..+.. .|..-.. -..++|-..+..+..+..-+...|++.+.-+||.-+||.|...+..+ .|=
T Consensus 2 CepI~~~~C~~-l~Yn~T-~~PN~lg--H~sq~ea~~~~~~~~f~pLv~~~Csp~l~~FlCsl~~P~C~~~~~~~--i~P 75 (122)
T cd07888 2 CEPITLELCMN-LPYNTT-RYPNYLG--HRTQKEASISWESSLFPALVQTNCYKYLMFFACTILVPKCDPVTQQR--IPP 75 (122)
T ss_pred CccCCHhhhCC-CCcCcc-cCCcccC--CCCHHHHHHhhhHHHHHhHHhcCCChhHHHHHHhccCccccCCCCCC--CCC
Confidence 77777778886 344443 3433221 11233321111012322336789999999999999999996544433 667
Q ss_pred ccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCC---CCCCCCCCcccCCCCcCC
Q psy5539 115 CYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELP---NCDTLPKYEVVNGKPTCS 171 (653)
Q Consensus 115 C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp---~C~~lp~~~~~~~~~~C~ 171 (653)
||.-|+.+| .-|... ++. -.+..| +|+.+|... .....|.
T Consensus 76 CRslCe~vr-~~C~~~---m~~-----------fg~~WP~~l~C~~fP~~~--~~~~~C~ 118 (122)
T cd07888 76 CRSLCRNSK-ERCESV---LGI-----------VGLQWPEDTDCAQFPEEN--SDNQTCL 118 (122)
T ss_pred cHHHHHHHH-HHHHHH---HHH-----------hCCCCCCcCccccCCCCC--CCCCcCC
Confidence 999999999 777322 221 123455 799999754 3344564
No 487
>cd07464 CRD_FZ2 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 2 (Fz2) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 2 (Fz2) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Fz2 is involved in the Wnt/beta-catenin signaling pathway and in the activation of protein kinase C and calcium/calmodulin-dependent protein kinase (CaM kinase).
Probab=97.35 E-value=0.00057 Score=61.32 Aligned_cols=114 Identities=17% Similarity=0.403 Sum_probs=73.2
Q ss_pred CCccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHH-HHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCC
Q psy5539 32 QGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQ-IVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPM 110 (653)
Q Consensus 32 ~g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~ 110 (653)
.|.|++-+=..|+.+ ..+...|=|.-.- ..++|- .....|.-| +...|++.+.-+||..+||.|.. .. .
T Consensus 2 ~~~CepI~~~~C~~l-~Yn~T~~PN~lgH---~sq~ea~~~~~~f~pL---v~~~Csp~l~~FlCSl~~P~C~~-~~--~ 71 (127)
T cd07464 2 HGFCQPISIPLCTDI-AYNQTIMPNLLGH---TNQEDAGLEVHQFYPL---VKVQCSLELRFFLCSMYAPVCTV-LE--Q 71 (127)
T ss_pred CCccccCChhhhCCC-CCCcccCCcccCC---CCHHHHHHHHHHHHHH---HhcCCChhHHHHHhhccCCccCC-CC--C
Confidence 588999999999975 5454444333221 122221 122345555 67899999999999999999965 22 3
Q ss_pred CCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCC---CCCCCCCCcccCCCCcCCCC
Q psy5539 111 SLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELP---NCDTLPKYEVVNGKPTCSHA 173 (653)
Q Consensus 111 ~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp---~C~~lp~~~~~~~~~~C~~~ 173 (653)
+.|=||.-|+.+| .-|.... +. -.+..| +|+++|... +...|...
T Consensus 72 ~i~PCRslCe~vr-~~C~~~m---~~-----------fg~~WP~~l~C~~fP~~~---~~~~C~~~ 119 (127)
T cd07464 72 AIPPCRSICERAR-QGCEALM---NK-----------FGFQWPERLRCENFPRHG---AEQICVGQ 119 (127)
T ss_pred cCCCcHHHHHHHH-HHHHHHH---HH-----------hCCCCCCcCCcccCCCCC---CCCcCCCC
Confidence 3556999999999 7774332 21 123455 799999753 23456533
No 488
>cd07466 CRD_FZ7 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 7 (Fz7) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 7 (Fz7) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Xenopus Fz7 is important in Wnt/beta-catenin signaling pathways controlling the transcriptional activation of target genes Siamois and Xnr3 in the animal caps of late blastula.
Probab=97.32 E-value=0.00068 Score=60.71 Aligned_cols=115 Identities=17% Similarity=0.394 Sum_probs=73.9
Q ss_pred CCccccCccchhhhhhcCCCeEEEcCCCcCCcccHHH-HHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCC
Q psy5539 32 QGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNE-QIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPM 110 (653)
Q Consensus 32 ~g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~ 110 (653)
.|.|++-+=..|+.+ ..+...|=|.-.- ..++| ......|.-| |...|++.+.-+||..+||.|.. .. .
T Consensus 2 ~~~CepI~~~~C~~l-~Yn~T~~PN~lgH---~~q~ea~~~~~~f~pL---v~~~Csp~l~~FlCsl~~P~C~~-~~--~ 71 (125)
T cd07466 2 HGFCQPISIPLCTDI-AYNQTIMPNLLGH---TNQEDAGLEVHQFYPL---VKVQCSPELKFFLCSMYAPVCTV-LE--Q 71 (125)
T ss_pred CCccccCCHHHhCCC-CCCcccCCcccCC---CCHHHHHHHHHHHHHH---HhCCCChhHHHHhhhccCCccCC-CC--C
Confidence 589999999999975 5444433333211 12222 1122335555 77899999999999999999964 22 3
Q ss_pred CCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCC---CCCCCCCCcccCCCCcCCCCC
Q psy5539 111 SLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELP---NCDTLPKYEVVNGKPTCSHAQ 174 (653)
Q Consensus 111 ~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp---~C~~lp~~~~~~~~~~C~~~~ 174 (653)
+.|=||.-|+.+| .-|... ++. -.+..| +|+++|... +...|....
T Consensus 72 ~i~PCRslCe~vr-~~C~~~---m~~-----------fg~~WP~~l~C~~fP~~~---~~~~Ci~~~ 120 (125)
T cd07466 72 AIPPCRSLCERAR-QGCEAL---MNK-----------FGFQWPERLRCENFPVHG---AGEICVGQN 120 (125)
T ss_pred cCCCcHHHHHHHH-HHHHHH---HHH-----------hCCCCCCcCCcccCCCCC---CCCcCcCCC
Confidence 4667999999999 677322 221 123455 799999753 244565443
No 489
>cd07465 CRD_FZ1 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 1 (Fz1) receptor. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 1 (Fz1) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata.
Probab=97.27 E-value=0.00074 Score=60.65 Aligned_cols=114 Identities=18% Similarity=0.410 Sum_probs=73.7
Q ss_pred CCccccCccchhhhhhcCCCeEEEcCCCcCCcccHHH-HHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCC
Q psy5539 32 QGYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNE-QIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPM 110 (653)
Q Consensus 32 ~g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~ 110 (653)
.|.|++-+=..|..+ ..+...|=|.- . -..++| .+....|.-| |...|++...-+||..+||.|.. . +.
T Consensus 2 ~~~Cepi~~~~C~~l-~Yn~T~~PN~l-g--h~~q~ea~~~~~~f~pL---v~~~Csp~l~~FLCSl~~P~C~~-~--~~ 71 (127)
T cd07465 2 HGYCQPISIPLCTDI-AYNQTIMPNLL-G--HTNQEDAGLEVHQFYPL---VKVQCSAELKFFLCSMYAPVCTV-L--EQ 71 (127)
T ss_pred CCeeeeCCHHHhCCC-CCCcccCCccc-C--CCCHHHHHHHHHHHHHH---HhCCCChhhHhHhhhccCCcccC-C--CC
Confidence 589999999999985 44444433332 1 112222 2222335555 77899999999999999999965 2 23
Q ss_pred CCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCC---CCCCCCCCcccCCCCcCCCC
Q psy5539 111 SLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELP---NCDTLPKYEVVNGKPTCSHA 173 (653)
Q Consensus 111 ~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp---~C~~lp~~~~~~~~~~C~~~ 173 (653)
+.|=||.-|+.+| .-|... ++. -.+..| +|+.+|... +...|...
T Consensus 72 ~i~PCRslCe~vr-~~C~~~---m~~-----------fg~~WP~~l~C~~fP~~~---~~~~C~~~ 119 (127)
T cd07465 72 ALPPCRSLCERAR-QGCEAL---MNK-----------FGFQWPDTLRCEKFPVHG---AGELCVGQ 119 (127)
T ss_pred cCCccHHHHHHHH-HHHHHH---HHH-----------hCCCCCCcCCcccCCCCC---CCCcccCC
Confidence 4667999999999 667322 211 123455 899999753 24456543
No 490
>cd07458 CRD_FZ1_like Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 1. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 1 (Fz1), frizzled 2 (Fz2), and frizzled 7 (Fz7) receptors, and similar proteins. This domain is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. Very little is known about the mechanism by which CRD domains interact with their ligands. The domain contains 10 conserved cysteines.
Probab=97.22 E-value=0.0008 Score=59.83 Aligned_cols=105 Identities=18% Similarity=0.442 Sum_probs=67.3
Q ss_pred CccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHH-HHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCCC
Q psy5539 33 GYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQ-IVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPMS 111 (653)
Q Consensus 33 g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~-~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~~ 111 (653)
|.|++-+=..|+. +..+... |..... -..++|- +....|..| +...|++..+.+||.-+||.|.. .. .+
T Consensus 1 ~~C~pi~~~~C~~-l~Yn~T~-~PN~lg--h~~q~ea~~~l~~~~pL---v~~~C~p~l~~FlCsl~~P~C~~-~~--~~ 70 (119)
T cd07458 1 GKCEPITIPLCTD-IPYNMTI-FPNLLG--HTKQEDAGLEVHQFYPL---VKVQCSPDLKFFLCSVYAPVCTV-LE--RP 70 (119)
T ss_pred CccccCChHHhCC-CCCCccC-CCCccC--CCCHHHHHHHHHHHHHH---HhCCCChhHHHHhhhccccccCC-CC--Cc
Confidence 5788888889987 4444443 333321 1122332 122234455 67899999999999999999964 22 34
Q ss_pred CCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCC---CCCCCCCCc
Q psy5539 112 LPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELP---NCDTLPKYE 162 (653)
Q Consensus 112 ~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp---~C~~lp~~~ 162 (653)
.+=||.-|+.+| .-|.. .++. -.+..| +|+.+|...
T Consensus 71 i~PCRslCe~vr-~~C~~---~m~~-----------~g~~WP~~l~C~~fP~~~ 109 (119)
T cd07458 71 IPPCRSLCESAR-QGCEA---LMNK-----------FGFQWPESLDCEKFPVHG 109 (119)
T ss_pred CCccHHHHHHHH-HHHHH---HHHH-----------hCCCCCCCCCcccCCCCC
Confidence 667999999999 67733 2221 123444 899999753
No 491
>cd07460 CRD_FZ5 Cysteine-rich Wnt-binding domain (CRD) of the frizzled 5 (Fz5) receptor.proteins. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 5 (Fz5) receptor, and is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. CRD containing Fzs have been found in diverse species from amoebas to mammals. 10 different frizzled proteins are found in vertebrata. Fz5 plays critical regulating roles in the yolk sac and placental angiogenesis, in the maturation of the Paneth cell phenotype, in governing the neural potential of progenitors in the developing retina, and in neuronal s
Probab=97.20 E-value=0.0008 Score=60.39 Aligned_cols=115 Identities=20% Similarity=0.383 Sum_probs=71.3
Q ss_pred CccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHH--HHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCC
Q psy5539 33 GYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMA--LWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPM 110 (653)
Q Consensus 33 g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~--~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~ 110 (653)
-.|++-+=..|..+ ..+...|=|.-.- ..++| .... .|.-| +...|++.+.-+||.-+||.|.+... .
T Consensus 3 ~~CepI~~~~C~~l-~Yn~T~~PN~lgh---~~q~e-a~~~~~~f~pL---v~~~Csp~l~~FlCS~~~P~C~~~~~--~ 72 (127)
T cd07460 3 LVCQEITVPMCKGI-GYNLTYMPNQFNH---DTQDE-AGLEVHQFWPL---VEIQCSPDLRFFLCSMYTPICLPDYR--K 72 (127)
T ss_pred CEecccChhhhCCC-CCCcccCCCccCC---CCHHH-HHHHHHHHHHH---HhCCCChhHHHHhhhccCccccCCCC--C
Confidence 35888888889875 4444333333211 12222 2222 35555 56799999999999999999965433 3
Q ss_pred CCCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCC---CCCCCCCCcccCCCCcCCCCC
Q psy5539 111 SLPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELP---NCDTLPKYEVVNGKPTCSHAQ 174 (653)
Q Consensus 111 ~~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp---~C~~lp~~~~~~~~~~C~~~~ 174 (653)
+.+=||.-|+.+| .-|.. .++. ..+..| +|+.+|... .....|...+
T Consensus 73 ~i~PCRslCe~vr-~~C~~---~m~~-----------fg~~WP~~l~C~~fP~~~--~~~~~C~~~~ 122 (127)
T cd07460 73 PLPPCRSVCERAK-AGCSP---LMRQ-----------YGFAWPERMNCDRLPVLG--DPETLCMDYN 122 (127)
T ss_pred cCCccHHHHHHHH-HHHHH---HHHH-----------hCCCCCCcCChhhCCCCC--CCCCccCCCC
Confidence 4666999999999 66732 2221 123334 799999765 2344566443
No 492
>cd07456 CRD_FZ5_like Cysteine-rich Wnt-binding domain (CRD) of receptors similar to frizzled 5. The cysteine-rich domain (CRD) is an essential extracellular portion of the frizzled 5 (Fz5) and frizzled 8 (Fz8) receptors, and similar proteins. This domain is required for binding Wnt proteins, which play fundamental roles in many aspects of early development, such as cell and tissue polarity, neural synapse formation, and the regulation of proliferation. Fz proteins serve as Wnt receptors for multiple signal transduction pathways, including both beta-catenin dependent and -independent cellular signaling, as well as the planar cell polarity pathway and Ca(2+) modulating signaling pathway. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. Very little is known about the mechanism by which CRD domains interact with their ligands. The domain contains 10 conserved cysteines.
Probab=97.15 E-value=0.0014 Score=58.47 Aligned_cols=105 Identities=19% Similarity=0.418 Sum_probs=66.8
Q ss_pred ccccCccchhhhhhcCCCeEEEcCCCcCCcccHHH-HHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCCCC
Q psy5539 34 YCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNE-QIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPMSL 112 (653)
Q Consensus 34 ~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~~~ 112 (653)
.|++-+=..|+.+ ..+. ..|..... -..++| ......|..| +...|++.+.-+||.-++|.|.... +.+.
T Consensus 1 ~Cepi~~~~C~~l-~Yn~-T~~PN~lg--h~~q~ea~~~~~~~~pL---v~~~Csp~l~~FlCsl~~P~C~~~~--~~~i 71 (120)
T cd07456 1 KCEEITIPMCKGI-GYNM-TYMPNQFN--HDTQEEAGLEVHQFWPL---VEIQCSPDLKFFLCSMYTPICLEDY--DKPL 71 (120)
T ss_pred CccccChhhhCCC-CCCc-ccCCCcCC--CcCHHHHHHHHHHHHHH---HhCCCChhHHHHhHhccCcccCCCC--CCcC
Confidence 3777777888874 5443 44444322 122333 2222235555 6679999999999999999996543 3347
Q ss_pred CcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCC---CCCCCCCCCc
Q psy5539 113 PLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFEL---PNCDTLPKYE 162 (653)
Q Consensus 113 p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~l---p~C~~lp~~~ 162 (653)
+-||.-|+.++ .-|.. .++.. .+.. .+|+.+|...
T Consensus 72 ~PCRslCe~vr-~~C~~---~m~~~-----------g~~WP~~l~C~~fP~~~ 109 (120)
T cd07456 72 PPCRSVCERAR-DGCAP---IMRQY-----------GFAWPERMSCDALPEGG 109 (120)
T ss_pred CccHHHHHHHH-HHHHH---HHHHh-----------CCCCCCcCChhhCCCCC
Confidence 77999999999 67732 22211 1233 5899999754
No 493
>cd07454 CRD_LIN_17 Cysteine-rich domain (CRD) of LIN_17. A cysteine-rich domain (CRD) is an essential component of a number of cell surface receptors, which are involved in multiple signal transduction pathways, particularly in modulating the activity of the Wnt proteins, which play a fundamental role in the early development of metazoans. CRD is also found in secreted frizzled related proteins (SFRPs), which lack the transmembrane segment found in the frizzled protein. The CRD domain is also present in the alpha-1 chain of mouse type XVIII collagen, in carboxypeptidase Z, several receptor tyrosine kinases, and the mosaic transmembrane serine protease corin. The CRD domain is well conserved in metazoans - 10 frizzled proteins have been identified in mammals, 4 in Drosophila and 3 in Caenorhabditis elegans. CRD domains have also been identified in multiple tandem copies in a Dictyostelium discoideum protein. Very little is known about the mechanism by which CRD domains interact with the
Probab=97.13 E-value=0.00085 Score=60.07 Aligned_cols=88 Identities=19% Similarity=0.490 Sum_probs=59.8
Q ss_pred CCccccCccchhhhhhcCCCeEEEcCCCc-CCcccHHHHHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCC
Q psy5539 32 QGYCSQYNGKICKNYLNRTGRVWFNSSLE-SAGGDLNEQIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPM 110 (653)
Q Consensus 32 ~g~c~~y~g~~c~~~l~~~~~v~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~ 110 (653)
.|.|++-+=..|+. |..+.. .|..... ..+.+.+ .....|.-| +...|++...-+||.-+||.|.... +.
T Consensus 2 ~~~C~Pi~~~~C~~-l~Yn~T-~~PN~lgh~~q~ea~--~~~~~f~pL---v~~~C~p~l~~FlCsl~~P~C~~~~--~~ 72 (124)
T cd07454 2 KGKCIPIDIELCKD-LPYNYT-YFPNTILHNDQHTLQ--THTEHFKPL---MKTKCHPHIHFFICSVFAPMCPIGM--PQ 72 (124)
T ss_pred CCccccCChhhhCC-CCcCcc-cCCcccCCCCHHHHH--HHHHHHHHH---HhcCCChhHHHHhhcccccccCCCC--CC
Confidence 57899999999997 455444 4443321 1111222 112235555 7799999999999999999996543 34
Q ss_pred CCCcccchhhhhhhccchh
Q psy5539 111 SLPLCYEDCIAVRYSFCYN 129 (653)
Q Consensus 111 ~~p~C~~~c~~~~~~~c~~ 129 (653)
+.+-||.-|+.+| .-|..
T Consensus 73 ~i~PCRslCe~vr-~~C~~ 90 (124)
T cd07454 73 AVTSCKSVCEQVK-ADCFS 90 (124)
T ss_pred cCCCChhHHHHHH-HHHHH
Confidence 4777999999999 67743
No 494
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.12 E-value=0.0017 Score=66.32 Aligned_cols=72 Identities=18% Similarity=0.167 Sum_probs=45.2
Q ss_pred ecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccc-eEEeEEecCCceEEEEeecC
Q psy5539 373 LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV-KLLGVCAVGKPMCLLFEYMG 451 (653)
Q Consensus 373 LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv-~l~g~~~~~~~~~LV~Ey~~ 451 (653)
+..|-.+.+|+... ++..+++|........ ...+..+|.++++.+....++ ++++... -++|+||++
T Consensus 4 ~~~G~tn~~y~~~~-------~~~~~vlR~~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~ 71 (256)
T TIGR02721 4 LSGGLTNRSWRIEH-------PGISFVWRPQSPVCKA-LGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLE 71 (256)
T ss_pred CCCcCcCCeEEEEe-------CCccEEEeeCCccccc-ccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEecc
Confidence 45677889998763 2356888876543222 112357788888888644343 4444432 369999999
Q ss_pred CCChH
Q psy5539 452 RGDLN 456 (653)
Q Consensus 452 ~gsL~ 456 (653)
|..+.
T Consensus 72 G~~~~ 76 (256)
T TIGR02721 72 GEVIT 76 (256)
T ss_pred Ccccc
Confidence 86654
No 495
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.10 E-value=0.0046 Score=62.04 Aligned_cols=77 Identities=16% Similarity=0.246 Sum_probs=48.2
Q ss_pred EeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCcc-ceEEeEEecCCceEEEEe
Q psy5539 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI-VKLLGVCAVGKPMCLLFE 448 (653)
Q Consensus 370 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnI-v~l~g~~~~~~~~~LV~E 448 (653)
++.|..|-...+|+....+ .....+++|........ ..+.++|+.++..+...++ .++++... -.+|||
T Consensus 3 i~~l~gG~tN~~~~v~~~~----~~~~~~vlR~~~~~~~~--~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e 72 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKE----DNQDAVLVRVYGNKTEL--IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYE 72 (235)
T ss_pred EEEcCCcccceEEEEEcCC----CCCCeEEEEEccCCccc--eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEE
Confidence 4567788888999986421 02356888877643221 1234578888888854333 34444332 248999
Q ss_pred ecCCCChH
Q psy5539 449 YMGRGDLN 456 (653)
Q Consensus 449 y~~~gsL~ 456 (653)
|+++.++.
T Consensus 73 ~i~G~~l~ 80 (235)
T cd05157 73 FIPGRTLE 80 (235)
T ss_pred eeCCCcCC
Confidence 99987763
No 496
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.05 E-value=0.0064 Score=63.88 Aligned_cols=157 Identities=13% Similarity=0.216 Sum_probs=82.7
Q ss_pred CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCC--ccceEEeEE------
Q psy5539 366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHP--NIVKLLGVC------ 437 (653)
Q Consensus 366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~Hp--nIv~l~g~~------ 437 (653)
....++.++.|.-..+|+.+.. + ..+++|..+..... +....|.+++..|... .+.+++...
T Consensus 23 ~~~~i~~~~~G~~n~~y~v~t~------~-~~~vLK~~~~~~~~---~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~ 92 (307)
T TIGR00938 23 ELLSLKGIAEGVENSNYLLTTD------V-GRYILTLYEKRVKA---EELPFFLALTTHLAARGLPVPKPVKSRDGRQLS 92 (307)
T ss_pred CceeccccCCccccceEEEEeC------C-CcEEEEEecCCCCH---HHHHHHHHHHHHHHHCCCCCCccccCCCCCeeh
Confidence 3455677888888899988642 2 24777876543222 2344566666666322 234444321
Q ss_pred ecCCceEEEEeecCCCChH-----------HHHhhcCC--CCCcCCC-----ccccccccc----CCCCCCHHHHHHHHH
Q psy5539 438 AVGKPMCLLFEYMGRGDLN-----------DFLRICSP--NNYINGT-----YSSMESSIH----RVPQLSTCDLITIAL 495 (653)
Q Consensus 438 ~~~~~~~LV~Ey~~~gsL~-----------~~L~~~~~--~~~~~~~-----~~~~~~~~~----~~~~l~~~~~~~i~~ 495 (653)
...+..++++||++|..+. +.|...+. ..+.... ......... ....+.. ....
T Consensus 93 ~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~----~~~~ 168 (307)
T TIGR00938 93 TLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEA----HMGA 168 (307)
T ss_pred hcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCH----HHHH
Confidence 2245678999999885542 11111110 0000000 000000000 0001111 1112
Q ss_pred HHHHHHHHhh-------hCCceecCCCCCCEeEcCCCcEEEeccCccc
Q psy5539 496 QIASGMVYLS-------DRKFVHRDLATRNCLINDQMVVKIADFGLSR 536 (653)
Q Consensus 496 qia~gL~yLH-------~~~ivHrDLkp~NILl~~~~~vkI~DfGla~ 536 (653)
.+...++++. ..+++|+|+.+.||++++++.+.|+||+.+.
T Consensus 169 ~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 169 ELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred HHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 2334455553 2589999999999999998878999999874
No 497
>cd07442 CRD_SFRP4 Cysteine-rich domain of the secreted frizzled-related protein 4 (SFRP4), a Wnt antagonist. The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related Protein 4 (SFRP4), which regulates the activity of Wnt proteins, key players in a number of fundamental cellular processes such as embryogenesis and postnatal development. SFRPs antagonize the activation of Wnt signaling by binding to the CRDs domains of frizzled (Fz) proteins, thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs.
Probab=97.00 E-value=0.0017 Score=58.20 Aligned_cols=105 Identities=21% Similarity=0.446 Sum_probs=68.4
Q ss_pred ccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHH--HHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCCC
Q psy5539 34 YCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMA--LWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPMS 111 (653)
Q Consensus 34 ~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~--~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~~ 111 (653)
.|++-+=..|.. +..+ ...|..... ...|+....+ .|.-| |...|++...-+||..+||.|... ..+.+
T Consensus 4 ~CepI~i~~C~~-l~Yn-~T~~PN~lg---H~~q~ea~~~~~~f~pL---v~~~Csp~l~~FLCS~~~P~C~~~-~~~~~ 74 (127)
T cd07442 4 PCEAVRIPMCRH-MPWN-ITRMPNHLH---HSTQENAVLAIEQYEEL---VDTGCSPVLPFFLCAMYAPICTLE-FLYDP 74 (127)
T ss_pred cccccChhhhCC-CCcC-cccCcCccC---CCCHHHHHHHHHHHHHH---HcCCCCcchHHHHHhhcCCccCCC-CCCCc
Confidence 588888888987 4444 344444322 1223222222 34455 779999999999999999999543 23455
Q ss_pred CCcccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCC---CCCCCCCCc
Q psy5539 112 LPLCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELP---NCDTLPKYE 162 (653)
Q Consensus 112 ~p~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp---~C~~lp~~~ 162 (653)
.+=||.-|+.+| .-|. ..++. -.+..| +|+++|...
T Consensus 75 i~PCRslCe~vr-~~C~---~~m~~-----------fg~~WP~~L~C~~fP~~~ 113 (127)
T cd07442 75 IKPCRSVCQRAR-DGCE---PIMRR-----------YNHSWPESLACDDLPVYD 113 (127)
T ss_pred CCccHHHHHHHH-HHHH---HHHHH-----------hCCCCCCcCCcccCCCCC
Confidence 777999999999 6673 22321 124555 799999743
No 498
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.97 E-value=0.011 Score=64.13 Aligned_cols=78 Identities=17% Similarity=0.083 Sum_probs=51.7
Q ss_pred EeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc------HHHHHHHHHHHHHHhhCC---CCccceEEeEEecC
Q psy5539 370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS------EYLQTDFEREACLLAEFD---HPNIVKLLGVCAVG 440 (653)
Q Consensus 370 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~------~~~~~~f~~Ei~il~~l~---HpnIv~l~g~~~~~ 440 (653)
.+.||.|.+..||+++..+ ..+.|+||.-.+... ....+.+..|.+.|..+. ..++.+++.+ +.
T Consensus 31 ~~elggGn~N~VyrV~~~~-----g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~ 103 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTE-----GGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DE 103 (401)
T ss_pred eeEcCCCceEEEEEEEeCC-----CCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CC
Confidence 4678999999999998631 114799997542110 112345667777777763 3456777776 33
Q ss_pred CceEEEEeecCCCC
Q psy5539 441 KPMCLLFEYMGRGD 454 (653)
Q Consensus 441 ~~~~LV~Ey~~~gs 454 (653)
+..++||||+++..
T Consensus 104 ~~~~lVME~L~~~~ 117 (401)
T PRK09550 104 ELAVTVMEDLSDHK 117 (401)
T ss_pred CCCEEEEecCCCcc
Confidence 55789999998643
No 499
>cd07441 CRD_SFRP3 Cysteine-rich domain of the secreted frizzled-related protein 3 (SFRP3, alias FRZB), a Wnt antagonist. The cysteine-rich domain (CRD) is an essential part of the secreted frizzled-related protein 3 (SFRP3, alias FRZB), which plays important roles in embryogenesis and postnatal development as an antagonist of Wnt proteins, key players in a number of fundamental cellular processes. SFRPs antagonize the activation of Wnt signaling by binding to the CRD domains of frizzled proteins (Fz), thereby preventing Wnt proteins from binding to these receptors. SFRPs are also known to have functions unrelated to Wnt, as enhancers of procollagen cleavage by the TLD proteinases. SFRPs and Fz proteins both contain CRD domains, but SFRPs lack the seven-pass transmembrane domain which is an integral part of Fzs. SFRP3 regulates Wnt signaling activity in bone development and homeostasis. It is also involved in the control of planar cell polarity.
Probab=96.96 E-value=0.0017 Score=58.06 Aligned_cols=107 Identities=20% Similarity=0.384 Sum_probs=68.5
Q ss_pred ccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCCCCC
Q psy5539 34 YCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPMSLP 113 (653)
Q Consensus 34 ~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~~~p 113 (653)
.|++-+-..|..+ ..+ ..+|..... ...|+....++ .++...|...|++...-+||..+||.|... ..+.+.+
T Consensus 3 ~CepI~~~~C~~l-~Yn-~T~~PN~lg---H~~q~ea~~~~-~~f~pLv~~~Csp~l~~FLCS~~~P~C~~~-~~~~~i~ 75 (126)
T cd07441 3 SCEPVRIPMCKSM-PWN-MTKMPNHLH---HSTQANAVLAI-EQFEGLLGTQCSPDLLFFLCAMYAPICTID-FQHEPIK 75 (126)
T ss_pred cccccChhhhCCC-CcC-cccCCcccC---CCCHHHHHHHH-HHHHHHhcCCCCccchhHHhhccCcccCCC-CCCCcCC
Confidence 5888888889873 444 445554422 22233222222 333344789999999999999999999543 2234577
Q ss_pred cccchhhhhhhccchhHHHHHHhhhccccccccCCCcCCC---CCCCCCCCc
Q psy5539 114 LCYEDCIAVRYSFCYNDWAYIEENKARGIRFKSRGHFELP---NCDTLPKYE 162 (653)
Q Consensus 114 ~C~~~c~~~~~~~c~~e~~~~~~~~~~~~~~~~~~~~~lp---~C~~lp~~~ 162 (653)
=||.-|+.+| .-|... ++. -.+..| +|+++|...
T Consensus 76 PCRslCe~vr-~~C~~~---m~~-----------fg~~WP~~L~C~~fP~~~ 112 (126)
T cd07441 76 PCKSVCERAR-AGCEPV---LIR-----------YRHTWPESLACEELPVYD 112 (126)
T ss_pred ccHHHHHHHH-HHHHHH---HHH-----------hCCCCCCcCCcccCCCCC
Confidence 7999999999 667322 211 124555 799999753
No 500
>PRK05231 homoserine kinase; Provisional
Probab=96.86 E-value=0.012 Score=62.09 Aligned_cols=30 Identities=27% Similarity=0.397 Sum_probs=26.5
Q ss_pred CCceecCCCCCCEeEcCCCcEEEeccCccc
Q psy5539 507 RKFVHRDLATRNCLINDQMVVKIADFGLSR 536 (653)
Q Consensus 507 ~~ivHrDLkp~NILl~~~~~vkI~DfGla~ 536 (653)
.+++|+|+.+.|||++++...-|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 379999999999999977667899999875
Done!