Query         psy5539
Match_columns 653
No_of_seqs    522 out of 3667
Neff          8.2 
Searched_HMMs 13730
Date          Fri Aug 16 20:09:06 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy5539.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5539hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 9.9E-56 7.2E-60  459.4  27.7  295  354-648     2-300 (301)
  2 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 2.6E-54 1.9E-58  447.9  29.6  269  361-650    22-293 (299)
  3 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 4.1E-54   3E-58  438.4  28.8  261  362-650     2-262 (263)
  4 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 6.8E-54 4.9E-58  441.5  28.8  269  360-651     3-273 (285)
  5 d1opja_ d.144.1.7 (A:) Abelson 100.0 3.7E-54 2.7E-58  444.2  25.2  268  355-648     7-274 (287)
  6 d1mqba_ d.144.1.7 (A:) epha2 r 100.0 2.7E-53   2E-57  437.0  30.5  270  361-650     3-273 (283)
  7 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0   1E-53 7.4E-58  437.6  26.6  265  358-650     6-270 (272)
  8 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 4.1E-53   3E-57  433.8  27.1  266  359-653     2-276 (276)
  9 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 3.9E-53 2.9E-57  444.4  27.3  287  359-645    31-322 (325)
 10 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 7.8E-53 5.7E-57  431.3  27.3  268  360-650     2-269 (273)
 11 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 9.5E-53 6.9E-57  431.4  27.0  256  371-650    13-270 (277)
 12 d1ywna1 d.144.1.7 (A:818-1166) 100.0 2.5E-52 1.9E-56  433.1  28.0  289  358-650     6-297 (299)
 13 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 1.5E-52 1.1E-56  425.2  25.7  255  364-646     3-257 (258)
 14 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 3.7E-52 2.7E-56  433.7  24.9  279  359-647    14-292 (308)
 15 d2j4za1 d.144.1.7 (A:126-388)  100.0 6.2E-52 4.5E-56  421.8  24.6  254  364-648     5-260 (263)
 16 d1xkka_ d.144.1.7 (A:) EGF rec 100.0   1E-51 7.5E-56  432.1  26.6  266  364-650     8-273 (317)
 17 d2java1 d.144.1.7 (A:3-271) Se 100.0 2.3E-52 1.7E-56  426.5  21.0  257  365-645     4-268 (269)
 18 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 3.5E-51 2.6E-55  424.5  30.2  288  358-649     6-296 (299)
 19 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 6.2E-52 4.5E-56  423.6  21.0  255  365-645     5-262 (271)
 20 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0 8.5E-51 6.2E-55  424.0  30.1  292  359-652    17-310 (311)
 21 d1fmka3 d.144.1.7 (A:249-533)  100.0 1.8E-51 1.3E-55  423.2  24.2  264  358-649    10-273 (285)
 22 d1byga_ d.144.1.7 (A:) Carboxy 100.0 1.4E-51   1E-55  418.9  22.9  258  360-650     2-260 (262)
 23 d1yhwa1 d.144.1.7 (A:249-541)  100.0 9.1E-51 6.6E-55  419.4  24.1  252  364-645    19-272 (293)
 24 d2jfla1 d.144.1.7 (A:21-308) S 100.0 3.4E-51 2.5E-55  421.9  19.4  253  365-645    12-271 (288)
 25 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 5.6E-50   4E-54  417.4  28.6  263  368-651    30-295 (311)
 26 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 8.2E-51   6E-55  418.8  20.9  254  365-645     8-263 (288)
 27 d1u46a_ d.144.1.7 (A:) Activat 100.0 1.7E-50 1.2E-54  413.7  22.9  264  362-647     5-272 (273)
 28 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 2.6E-50 1.9E-54  419.9  24.1  279  362-650     7-286 (309)
 29 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 2.9E-50 2.1E-54  421.9  23.2  258  361-648     2-303 (322)
 30 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0   8E-50 5.8E-54  415.6  26.3  249  366-646    16-270 (309)
 31 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 4.2E-50 3.1E-54  417.5  24.1  253  364-645     8-266 (307)
 32 d1t4ha_ d.144.1.7 (A:) Protein 100.0 3.8E-49 2.7E-53  402.7  25.0  248  367-645    11-268 (270)
 33 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 6.6E-49 4.8E-53  413.2  25.7  254  363-645     3-263 (337)
 34 d1jksa_ d.144.1.7 (A:) Death-a 100.0 6.8E-49   5E-53  406.0  24.5  252  365-645    10-273 (293)
 35 d1koaa2 d.144.1.7 (A:5915-6264 100.0 7.9E-49 5.7E-53  414.9  25.2  252  365-645    26-282 (350)
 36 d1fota_ d.144.1.7 (A:) cAMP-de 100.0 1.7E-48 1.2E-52  407.0  25.2  250  364-645     3-259 (316)
 37 d1koba_ d.144.1.7 (A:) Twitchi 100.0 1.6E-48 1.2E-52  412.8  24.1  252  365-645    29-285 (352)
 38 d1phka_ d.144.1.7 (A:) gamma-s 100.0 1.9E-47 1.4E-51  391.5  25.7  252  365-645     3-272 (277)
 39 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 1.2E-47 8.8E-52  405.9  24.1  249  365-645    41-296 (350)
 40 d1xjda_ d.144.1.7 (A:) Protein 100.0 7.4E-48 5.4E-52  402.7  22.1  252  365-645     2-257 (320)
 41 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 4.5E-47 3.3E-51  389.2  26.7  259  364-648     6-275 (277)
 42 d1tkia_ d.144.1.7 (A:) Titin,  100.0 4.4E-47 3.2E-51  397.2  25.0  253  364-646     4-261 (321)
 43 d1omwa3 d.144.1.7 (A:186-549)  100.0   1E-46 7.5E-51  400.9  25.8  253  363-645     2-267 (364)
 44 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 2.2E-46 1.6E-50  388.2  22.7  249  369-645     2-282 (299)
 45 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 1.7E-45 1.2E-49  381.4  23.8  254  365-645     2-285 (298)
 46 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 5.4E-46   4E-50  391.0  20.1  249  365-647    11-276 (335)
 47 d1vjya_ d.144.1.7 (A:) Type I  100.0 1.6E-45 1.2E-49  382.2  23.5  255  365-650     3-298 (303)
 48 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 2.5E-45 1.8E-49  381.2  23.3  254  365-645     7-295 (305)
 49 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 5.9E-45 4.3E-49  375.0  22.1  252  365-645     2-283 (286)
 50 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 1.5E-45 1.1E-49  376.9  17.4  244  365-645     4-257 (273)
 51 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 7.3E-44 5.3E-48  367.4  25.6  254  365-645     2-285 (292)
 52 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 2.2E-43 1.6E-47  373.2  26.4  249  364-645    17-303 (346)
 53 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 1.9E-43 1.4E-47  373.4  25.7  254  365-645     8-297 (345)
 54 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 1.4E-43   1E-47  370.2  23.5  255  365-645    10-307 (318)
 55 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 4.8E-44 3.5E-48  374.2  15.7  257  364-645    23-294 (322)
 56 d1ckia_ d.144.1.7 (A:) Casein  100.0 1.6E-42 1.2E-46  359.0  25.8  256  365-649     7-278 (299)
 57 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 5.4E-43 3.9E-47  370.8  22.5  249  366-645    21-305 (350)
 58 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 2.2E-42 1.6E-46  362.7  24.4  245  365-645    35-321 (328)
 59 d1csna_ d.144.1.7 (A:) Casein  100.0 5.6E-42 4.1E-46  353.9  27.0  259  364-651     4-280 (293)
 60 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 3.1E-42 2.3E-46  364.4  22.4  251  364-646    17-304 (348)
 61 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 5.5E-42   4E-46  363.6  20.1  250  365-646    17-314 (355)
 62 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 3.4E-36 2.5E-40  319.3  18.6  252  364-645    12-330 (362)
 63 d1nl1a1 g.14.1.1 (A:66-147) Pr 100.0 8.3E-30   6E-34  208.2   8.6   81  187-267     1-81  (82)
 64 d2qj2a2 g.14.1.1 (A:127-209) N 100.0 6.9E-30   5E-34  209.4   7.6   82  186-267     1-82  (83)
 65 d1ki0a1 g.14.1.1 (A:81-163) Pl 100.0 1.5E-29 1.1E-33  207.3   8.4   82  185-266     2-83  (83)
 66 d1ki0a2 g.14.1.1 (A:164-250) P 100.0   2E-29 1.4E-33  207.9   8.4   82  185-267     1-82  (87)
 67 d1ki0a3 g.14.1.1 (A:251-333) P 100.0 1.7E-29 1.2E-33  206.6   7.5   81  184-265     3-83  (83)
 68 d1i71a_ g.14.1.1 (A:) Apolipop 100.0 3.5E-29 2.5E-33  204.9   7.3   81  186-267     1-81  (83)
 69 d5hpga_ g.14.1.1 (A:) Plasmino 100.0 5.9E-29 4.3E-33  204.3   8.5   82  186-267     1-83  (84)
 70 d2hpqp_ g.14.1.1 (P:) Meizothr  99.9 1.2E-29 9.1E-34  205.4   2.8   79  187-265     1-79  (79)
 71 d1a0ha1 g.14.1.1 (A:164-270) M  99.9 1.2E-28   9E-33  211.8   6.2   87  184-270     4-90  (109)
 72 d1pmla_ g.14.1.1 (A:) Plasmino  99.9 1.4E-27 9.8E-32  197.0   6.6   82  185-267     1-86  (86)
 73 d2i9aa2 g.14.1.1 (A:50-132) Ur  99.9 4.4E-27 3.2E-31  192.9   4.6   79  187-266     1-83  (83)
 74 d1zara2 d.144.1.9 (A:91-281) R  99.9 9.7E-23   7E-27  195.4  14.1  165  368-580     3-189 (191)
 75 d1j7la_ d.144.1.6 (A:) Type II  98.3 1.6E-06 1.2E-10   84.5  11.2   85  366-458    15-100 (263)
 76 d1nd4a_ d.144.1.6 (A:) Aminogl  97.8 4.3E-05 3.2E-09   73.6  10.6   74  373-456    18-94  (255)
 77 d1ijya_ a.141.1.1 (A:) Frizzle  97.7 1.3E-05 9.6E-10   68.7   4.4   86   33-129     2-89  (122)
 78 d1ijxa_ a.141.1.1 (A:) Secrete  97.5 3.4E-05 2.5E-09   66.3   4.0   88   33-128     1-88  (125)
 79 d2pula1 d.144.1.6 (A:5-396) Me  97.3 0.00027   2E-08   72.9   9.7   78  370-454    31-117 (392)
 80 d1nw1a_ d.144.1.8 (A:) Choline  96.1   0.013 9.7E-07   59.6  11.4   82  366-455    44-128 (395)
 81 d1zyla1 d.144.1.6 (A:4-328) Rd  95.9  0.0089 6.5E-07   59.3   9.0   69  378-454    35-110 (325)
 82 d2ppqa1 d.144.1.6 (A:5-320) Ho  93.5     0.4 2.9E-05   46.2  13.7   31  507-537   183-213 (316)
 83 d1ki0a2 g.14.1.1 (A:164-250) P  72.7    0.75 5.5E-05   35.4   2.0   25  101-127    51-75  (87)
 84 d1i71a_ g.14.1.1 (A:) Apolipop  69.9     0.7 5.1E-05   35.2   1.2   25  101-127    50-74  (83)
 85 d2qj2a2 g.14.1.1 (A:127-209) N  64.0     1.4  0.0001   33.4   1.9   28   99-127    48-75  (83)
 86 d2hpqp_ g.14.1.1 (P:) Meizothr  62.9     1.7 0.00013   32.6   2.2   26  101-127    49-74  (79)
 87 d1eaka4 g.14.1.2 (A:278-335) G  62.4     2.4 0.00017   29.7   2.7   29  233-261    25-56  (58)
 88 d5hpga_ g.14.1.1 (A:) Plasmino  61.2     1.6 0.00012   33.1   1.8   27  100-127    50-76  (84)
 89 d1e88a2 g.14.1.2 (A:102-160) F  61.2     1.2 8.6E-05   31.5   0.9   30  233-262    26-58  (59)
 90 d1ki0a3 g.14.1.1 (A:251-333) P  59.7     1.5 0.00011   33.2   1.4   25  101-127    54-78  (83)
 91 d1nl1a1 g.14.1.1 (A:66-147) Pr  58.6     1.9 0.00014   32.5   1.8   26  101-127    49-74  (82)
 92 d1ki0a1 g.14.1.1 (A:81-163) Pl  58.0     1.7 0.00013   32.9   1.4   26  101-127    52-77  (83)
 93 d1pmla_ g.14.1.1 (A:) Plasmino  57.7     1.6 0.00012   33.3   1.2   25  101-127    54-79  (86)
 94 d1eaka3 g.14.1.2 (A:217-277) G  56.0     3.4 0.00025   29.2   2.6   29  233-261    28-59  (61)
 95 d1eaka5 g.14.1.2 (A:336-393) G  52.8     1.8 0.00013   30.3   0.7   29  233-261    25-56  (58)
 96 d1l6ja3 g.14.1.2 (A:216-274) G  51.4       2 0.00014   30.3   0.7   29  233-261    26-57  (59)
 97 d1a0ha1 g.14.1.1 (A:164-270) M  44.6     4.1  0.0003   32.4   1.7   27  100-127    54-80  (109)
 98 d1h8pa2 g.14.1.2 (A:68-109) PD  41.3     2.9 0.00021   27.2   0.2   17  244-260    23-42  (42)
 99 d1e88a1 g.14.1.2 (A:42-101) Fi  40.0     6.5 0.00047   27.6   2.0   29  233-261    26-57  (60)
100 d2i9aa2 g.14.1.1 (A:50-132) Ur  39.1     3.7 0.00027   30.9   0.5   25  101-127    52-77  (83)
101 d1l6ja5 g.14.1.2 (A:332-390) G  29.4      11 0.00081   26.2   1.7   29  233-261    27-58  (59)
102 d1jb0i_ f.23.17.1 (I:) Subunit  22.5     6.6 0.00048   24.1  -0.5   12    6-17      5-16  (38)
103 d1h8pa1 g.14.1.2 (A:22-67) PDC  22.2      18  0.0013   23.7   1.6   22  244-265    23-45  (46)

No 1  
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=9.9e-56  Score=459.38  Aligned_cols=295  Identities=65%  Similarity=1.126  Sum_probs=254.8

Q ss_pred             CccccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceE
Q psy5539         354 NPKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKL  433 (653)
Q Consensus       354 ~~~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l  433 (653)
                      +|++..+|+++++|++.+.||+|+||+||+|++.+.....+++.||||+++........++|.+|++++++++||||+++
T Consensus         2 ~p~~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~   81 (301)
T d1lufa_           2 NPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKL   81 (301)
T ss_dssp             CHHHHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CcchhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccc
Confidence            67888999999999999999999999999999987667778899999999877777777889999999999999999999


Q ss_pred             EeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCc----ccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCc
Q psy5539         434 LGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTY----SSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKF  509 (653)
Q Consensus       434 ~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~i  509 (653)
                      ++++...+..++||||+++|+|.++|+............    ............+++..++.|+.||+.||+|||+++|
T Consensus        82 ~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~i  161 (301)
T d1lufa_          82 LGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF  161 (301)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCe
Confidence            999999999999999999999999998655432211000    0000112234568999999999999999999999999


Q ss_pred             eecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCC
Q psy5539         510 VHRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQ  589 (653)
Q Consensus       510 vHrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~  589 (653)
                      |||||||+|||||.++.+||+|||+|+.+...+.........+++.|||||.+.+..+|.++|||||||++|||++++.+
T Consensus       162 vHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~  241 (301)
T d1lufa_         162 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ  241 (301)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             EeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCC
Confidence            99999999999999999999999999877655555555566788999999999999999999999999999999999899


Q ss_pred             CCCCCCHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539         590 PYYGLTHEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK  648 (653)
Q Consensus       590 p~~~~~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~  648 (653)
                      ||.+.+..++...+.++..+..++.+++++.+|+.+||+.+|++||||.+|++.|++|+
T Consensus       242 p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         242 PYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             TTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            99999999999999999988889999999999999999999999999999999998875


No 2  
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=2.6e-54  Score=447.91  Aligned_cols=269  Identities=36%  Similarity=0.654  Sum_probs=227.8

Q ss_pred             ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539         361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG  440 (653)
Q Consensus       361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~  440 (653)
                      ++..++|++.+.||+|+||+||+|++..  .......||||.+.........++|.+|+++|++++|||||+++|++..+
T Consensus        22 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~   99 (299)
T d1jpaa_          22 EIDISCVKIEQVIGAGEFGEVCSGHLKL--PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKS   99 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             hhChhhcEEeeEEeeCCCeEEEEEEEeC--CCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC
Confidence            4556789999999999999999999753  22344679999998777777778899999999999999999999999999


Q ss_pred             CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539         441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL  520 (653)
Q Consensus       441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL  520 (653)
                      +..++||||+++|+|.+++..                   ....+++.+++.++.|||+||+|||+++|+||||||+|||
T Consensus       100 ~~~~iv~Ey~~~g~L~~~~~~-------------------~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NIL  160 (299)
T d1jpaa_         100 TPVMIITEFMENGSLDSFLRQ-------------------NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNIL  160 (299)
T ss_dssp             SSCEEEEECCTTEEHHHHHHT-------------------TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             CEEEEEEEecCCCcceeeecc-------------------ccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEE
Confidence            999999999999999999872                   2346899999999999999999999999999999999999


Q ss_pred             EcCCCcEEEeccCccccccccccc---cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539         521 INDQMVVKIADFGLSRKMYLQDYY---KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE  597 (653)
Q Consensus       521 l~~~~~vkI~DfGla~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~  597 (653)
                      |++++.+||+|||+|+.+......   .......+|+.|||||.+.++.++.++|||||||++|||+|+|.+||.+.+..
T Consensus       161 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~  240 (299)
T d1jpaa_         161 VNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ  240 (299)
T ss_dssp             ECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             ECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999999876433221   12223457899999999999999999999999999999999888899999999


Q ss_pred             HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539         598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD  650 (653)
Q Consensus       598 e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~  650 (653)
                      ++...+..+..++.+..+++++.+||.+||+.||++|||+++|++.|.++.++
T Consensus       241 ~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            99999999888888889999999999999999999999999999999987654


No 3  
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.1e-54  Score=438.39  Aligned_cols=261  Identities=34%  Similarity=0.715  Sum_probs=223.6

Q ss_pred             cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539         362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK  441 (653)
Q Consensus       362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~  441 (653)
                      +..++|++.+.||+|+||+||+|++.      ++..||||+++.....  .++|.+|++++++++|||||+++|++..++
T Consensus         2 idp~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~i~~~~~~--~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~   73 (263)
T d1sm2a_           2 IDPSELTFVQEIGSGQFGLVHLGYWL------NKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQA   73 (263)
T ss_dssp             BCCSCEEEEEEEECCSSCCEEEEEET------TTEEEEEEECCSSSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CChHHcEEEEEEeeCCCeEEEEEEEC------CCCEEEEEEECCCcCc--HHHHHHHHHHHHhcCCCCcccccceeccCC
Confidence            34578999999999999999999874      3467999999865432  457999999999999999999999999999


Q ss_pred             ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539         442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI  521 (653)
Q Consensus       442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl  521 (653)
                      ..++||||+++|+|.+++..                   ....+++..++.|+.|||.||+|||+++|+||||||+|||+
T Consensus        74 ~~~lv~E~~~~g~L~~~l~~-------------------~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill  134 (263)
T d1sm2a_          74 PICLVFEFMEHGCLSDYLRT-------------------QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV  134 (263)
T ss_dssp             SCEEEEECCTTCBHHHHHHT-------------------TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE
T ss_pred             ceEEEEEecCCCcHHHHhhc-------------------cccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee
Confidence            99999999999999999862                   23468899999999999999999999999999999999999


Q ss_pred             cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539         522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK  601 (653)
Q Consensus       522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~  601 (653)
                      ++++.+||+|||+++....... .......+|+.|||||.+.+..++.++||||||+++|||+|++.+|+...+..++.+
T Consensus       135 ~~~~~~Kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~  213 (263)
T d1sm2a_         135 GENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE  213 (263)
T ss_dssp             CGGGCEEECSCC-------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHH
T ss_pred             cCCCCeEecccchheeccCCCc-eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHH
Confidence            9999999999999987643332 233445688999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539         602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD  650 (653)
Q Consensus       602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~  650 (653)
                      .+..+.....|..+++++.+|+.+||+.||++|||+++|+++|.++.+.
T Consensus       214 ~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         214 DISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence            9999988888889999999999999999999999999999999998763


No 4  
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.8e-54  Score=441.50  Aligned_cols=269  Identities=34%  Similarity=0.636  Sum_probs=234.9

Q ss_pred             cccCCCCeeEEee-ecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEe
Q psy5539         360 LEFPRNDIIYVRD-LGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCA  438 (653)
Q Consensus       360 ~e~~~~~~~~~~~-LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~  438 (653)
                      +-+.++++.+.+. ||+|+||+||+|.+..   ..++..||||+++........++|.+|+++|++++|||||+++|++.
T Consensus         3 l~l~~~~~~~~~~~iG~G~fg~Vy~~~~~~---~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~   79 (285)
T d1u59a_           3 LFLKRDNLLIADIELGCGNFGSVRQGVYRM---RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ   79 (285)
T ss_dssp             CBCCGGGEEEEEEEEECCTTEEEEEEEEC------CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             eeecccCeEECCcEEecccCeEEEEEEEec---CCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec
Confidence            3456678888884 9999999999998743   23456899999987776767788999999999999999999999986


Q ss_pred             cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539         439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN  518 (653)
Q Consensus       439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N  518 (653)
                      . +..+|||||+++|+|.+++..                   ....+++.+++.++.||+.||+|||+++|+||||||+|
T Consensus        80 ~-~~~~lvmE~~~~g~L~~~l~~-------------------~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N  139 (285)
T d1u59a_          80 A-EALMLVMEMAGGGPLHKFLVG-------------------KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARN  139 (285)
T ss_dssp             S-SSEEEEEECCTTEEHHHHHTT-------------------CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             c-CeEEEEEEeCCCCcHHHHhhc-------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhh
Confidence            5 568999999999999999851                   23468999999999999999999999999999999999


Q ss_pred             EeEcCCCcEEEeccCccccccccccc-cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539         519 CLINDQMVVKIADFGLSRKMYLQDYY-KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE  597 (653)
Q Consensus       519 ILl~~~~~vkI~DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~  597 (653)
                      |||++++.+||+|||+|+.+...+.. .......+|+.|||||.+.++.++.++|||||||++|||+|.|.+||.+.+..
T Consensus       140 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~  219 (285)
T d1u59a_         140 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP  219 (285)
T ss_dssp             EEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH
T ss_pred             eeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999999999877544322 23334567899999999999999999999999999999999788899999999


Q ss_pred             HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q psy5539         598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL  651 (653)
Q Consensus       598 e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l  651 (653)
                      ++...+..+..++.|+.+++++++||.+||+.+|++|||+.+|++.|.....++
T Consensus       220 ~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~  273 (285)
T d1u59a_         220 EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  273 (285)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            999999999988899999999999999999999999999999999888665543


No 5  
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=3.7e-54  Score=444.16  Aligned_cols=268  Identities=40%  Similarity=0.786  Sum_probs=237.8

Q ss_pred             ccccccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEE
Q psy5539         355 PKLEQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLL  434 (653)
Q Consensus       355 ~~l~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~  434 (653)
                      |.+.++|+..++|++.+.||+|+||+||+|++.     .++..||||+++.....  .++|.+|+++|++++|||||+++
T Consensus         7 p~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~--~~~~~~E~~il~~l~HpnIv~~~   79 (287)
T d1opja_           7 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLL   79 (287)
T ss_dssp             TTCCTTBCCGGGEEEEEETTTTTTSSEEEEEEG-----GGTEEEEEEECCTTCSC--HHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCCcccEecHHHeEEeeEEeeCCCeEEEEEEEC-----CCCeEEEEEEECCccch--HHHHHHHHHHHHhCCCCCEecCC
Confidence            455677899999999999999999999999864     35689999999765433  45799999999999999999999


Q ss_pred             eEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539         435 GVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL  514 (653)
Q Consensus       435 g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL  514 (653)
                      |++..++..++||||+++|+|.+++...                  ....+++..++.|+.||+.||+|||+++|+||||
T Consensus        80 ~~~~~~~~~~iv~E~~~~g~l~~~l~~~------------------~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDl  141 (287)
T d1opja_          80 GVCTREPPFYIITEFMTYGNLLDYLREC------------------NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDL  141 (287)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHS------------------CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             ccEeeCCeeEEEeecccCcchHHHhhhc------------------cccchHHHHHHHHHHHHHHHHHHHHHCCcccCcc
Confidence            9999999999999999999999999732                  2346899999999999999999999999999999


Q ss_pred             CCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539         515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL  594 (653)
Q Consensus       515 kp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~  594 (653)
                      ||+||||++++.+||+|||+|+...... ........+++.|||||.+.++.++.++||||||+++|||++++.+|+.+.
T Consensus       142 Kp~NILl~~~~~~Kl~DFG~a~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~  220 (287)
T d1opja_         142 AARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI  220 (287)
T ss_dssp             SGGGEEECGGGCEEECCCCCTTTCCSSS-SEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             ccCeEEECCCCcEEEccccceeecCCCC-ceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcc
Confidence            9999999999999999999998654322 222234457889999999999999999999999999999999999889899


Q ss_pred             CHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539         595 THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK  648 (653)
Q Consensus       595 ~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~  648 (653)
                      +..++.+.+..+..++.++.+++++.+|+.+||+.||++|||+++|++.|..+.
T Consensus       221 ~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         221 DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             hHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            999999999888888888999999999999999999999999999999887764


No 6  
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-53  Score=436.99  Aligned_cols=270  Identities=37%  Similarity=0.664  Sum_probs=231.8

Q ss_pred             ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539         361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG  440 (653)
Q Consensus       361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~  440 (653)
                      |+..++|...+.||+|+||+||+|++.+. .......||||+++....+....+|.+|++++++++|||||+++|++...
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~-~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~   81 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTS-SGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY   81 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC----CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             cCCHHHeEeeeEEeeCCCeEEEEEEEeCC-CCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecC
Confidence            66778899999999999999999987542 12334689999998776666777899999999999999999999999999


Q ss_pred             CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539         441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL  520 (653)
Q Consensus       441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL  520 (653)
                      +..++||||+.+|+|.+++..                   ....+++.++++++.||+.||+|||+++|+||||||+|||
T Consensus        82 ~~~~~v~e~~~~~~l~~~~~~-------------------~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NIL  142 (283)
T d1mqba_          82 KPMMIITEYMENGALDKFLRE-------------------KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNIL  142 (283)
T ss_dssp             SSEEEEEECCTTEEHHHHHHH-------------------TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             CceEEEEEecccCcchhhhhc-------------------ccccccHHHHHHHHHHHHHhhhhccccccccCccccceEE
Confidence            999999999999999998862                   2356899999999999999999999999999999999999


Q ss_pred             EcCCCcEEEeccCcccccccccc-ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539         521 INDQMVVKIADFGLSRKMYLQDY-YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV  599 (653)
Q Consensus       521 l~~~~~vkI~DfGla~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~  599 (653)
                      |+.++.+||+|||+++.+..... ........+|+.|||||.+.++.++.++||||||+++|||++++.+|+.+.+..++
T Consensus       143 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~  222 (283)
T d1mqba_         143 VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV  222 (283)
T ss_dssp             ECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             ECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHH
Confidence            99999999999999987643322 12233456789999999999999999999999999999999999989999999999


Q ss_pred             HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539         600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD  650 (653)
Q Consensus       600 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~  650 (653)
                      .+.+.++..++.+..++.++.+|+.+||+.+|++|||+++|++.|..+.+.
T Consensus       223 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         223 MKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             HHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            999999988888899999999999999999999999999999999887653


No 7  
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-53  Score=437.58  Aligned_cols=265  Identities=37%  Similarity=0.697  Sum_probs=234.0

Q ss_pred             cccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEE
Q psy5539         358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC  437 (653)
Q Consensus       358 ~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~  437 (653)
                      +.+|++.++|++.+.||+|+||+||+|++.      ++..||||+++.....  .+.|.+|++++++++|||||+++|++
T Consensus         6 ~~wei~~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~--~~~~~~E~~~l~~l~HpnIv~~~g~~   77 (272)
T d1qpca_           6 DEWEVPRETLKLVERLGAGQFGEVWMGYYN------GHTKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVV   77 (272)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEET------TTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCeecCHHHeEEeEEEecCCCcEEEEEEEC------CCCEEEEEEEccCcCC--HHHHHHHHHHHHhCCCCCEeEEEeee
Confidence            456788899999999999999999999874      3468999999764332  45799999999999999999999987


Q ss_pred             ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539         438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR  517 (653)
Q Consensus       438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~  517 (653)
                      .. +..++||||+++|+|.+++...                  ....+++..+++|+.||++||+|||+++|+||||||+
T Consensus        78 ~~-~~~~iv~Ey~~~g~L~~~~~~~------------------~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~  138 (272)
T d1qpca_          78 TQ-EPIYIITEYMENGSLVDFLKTP------------------SGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA  138 (272)
T ss_dssp             CS-SSCEEEEECCTTCBHHHHTTSH------------------HHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             cc-CCeEEEEEeCCCCcHHHHHhhc------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchh
Confidence            54 5679999999999999987521                  1235899999999999999999999999999999999


Q ss_pred             CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539         518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE  597 (653)
Q Consensus       518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~  597 (653)
                      ||||++++.+||+|||+|+.+.... ........+|+.|||||.+.++.++.++||||||+++|||+|++.+|+...+..
T Consensus       139 NIll~~~~~~Kl~DFGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~  217 (272)
T d1qpca_         139 NILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP  217 (272)
T ss_dssp             GEEECTTSCEEECCCTTCEECSSSC-EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             heeeecccceeeccccceEEccCCc-cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999999998764333 233345678899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539         598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD  650 (653)
Q Consensus       598 e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~  650 (653)
                      ++...+..+..+..|+.+++++.+|+.+||+.||++|||+++|++.|.++..+
T Consensus       218 ~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         218 EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            99999999988888899999999999999999999999999999999887654


No 8  
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.1e-53  Score=433.77  Aligned_cols=266  Identities=29%  Similarity=0.477  Sum_probs=219.2

Q ss_pred             ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEE
Q psy5539         359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVC  437 (653)
Q Consensus       359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~  437 (653)
                      .+|++.++|.+.+.||+|+||+||+|+..        ..||||+++.. ......+.|.+|++++++++|||||+++|++
T Consensus         2 dwei~~~~~~~~~~lG~G~fg~Vy~~~~~--------~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~   73 (276)
T d1uwha_           2 DWEIPDGQITVGQRIGSGSFGTVYKGKWH--------GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS   73 (276)
T ss_dssp             CCBCCTTCCCCCSEEEECSSCEEEEEESS--------SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             CcccccccEEEEEEEeeCCCcEEEEEEEC--------CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEE
Confidence            46788899999999999999999999853        24999999743 2344567899999999999999999999987


Q ss_pred             ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539         438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR  517 (653)
Q Consensus       438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~  517 (653)
                      .. +..+|||||+++|+|.++|+.                   ....+++..++.|+.||++||+|||+++||||||||+
T Consensus        74 ~~-~~~~lv~Ey~~~g~L~~~l~~-------------------~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~  133 (276)
T d1uwha_          74 TA-PQLAIVTQWCEGSSLYHHLHI-------------------IETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSN  133 (276)
T ss_dssp             CS-SSCEEEEECCCEEEHHHHHHT-------------------SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             ec-cEEEEEEecCCCCCHHHHHhh-------------------ccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHH
Confidence            54 568999999999999999962                   2345899999999999999999999999999999999


Q ss_pred             CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc---CCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539         518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYYGL  594 (653)
Q Consensus       518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~t~ksDVwSlGvvl~ellt~~~~p~~~~  594 (653)
                      ||||++++.+||+|||+|+...............+|+.|||||.+.+   +.++.++|||||||++|||+||. .||.+.
T Consensus       134 NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~-~Pf~~~  212 (276)
T d1uwha_         134 NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ-LPYSNI  212 (276)
T ss_dssp             GEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSS-CTTTTC
T ss_pred             HEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCC-CCCCCC
Confidence            99999999999999999987644333333345678999999999864   35899999999999999999955 689876


Q ss_pred             CHH-HHHHHHHcCCc----cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhhC
Q psy5539         595 THE-EVVKYIKEGNI----LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLEN  653 (653)
Q Consensus       595 ~~~-e~~~~i~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l~~  653 (653)
                      +.. .+...+..+..    ...+..+++++.+||.+||+.||++|||+++|+++|+.+.+.+++
T Consensus       213 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~Pk  276 (276)
T d1uwha_         213 NNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPK  276 (276)
T ss_dssp             CCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCC
T ss_pred             ChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCCC
Confidence            654 45555555433    234567899999999999999999999999999999999988764


No 9  
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.9e-53  Score=444.39  Aligned_cols=287  Identities=37%  Similarity=0.651  Sum_probs=232.3

Q ss_pred             ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEE
Q psy5539         359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVC  437 (653)
Q Consensus       359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~  437 (653)
                      .+|+++++|++.+.||+|+||+||+|++.+.........||||.+...........+.+|+.++.++ +|||||++++++
T Consensus        31 kwei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~  110 (325)
T d1rjba_          31 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  110 (325)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEE
Confidence            4678899999999999999999999998765555666789999998766655667899999999998 899999999999


Q ss_pred             ecCCceEEEEeecCCCChHHHHhhcCCCCCcC-CCcc--cccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539         438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYIN-GTYS--SMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL  514 (653)
Q Consensus       438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~-~~~~--~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL  514 (653)
                      ...+..+|||||+++|+|.++|+......... ..+.  ...........+++..++.|+.||++||+|||+++||||||
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDl  190 (325)
T d1rjba_         111 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  190 (325)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             eeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            99999999999999999999998543211000 0000  00011123456899999999999999999999999999999


Q ss_pred             CCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539         515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL  594 (653)
Q Consensus       515 kp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~  594 (653)
                      ||+|||++.++.+||+|||+|+...............+|+.|||||.+.++.++.++|||||||++|||+|+|.+||.+.
T Consensus       191 Kp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~  270 (325)
T d1rjba_         191 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  270 (325)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             chhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCC
Confidence            99999999999999999999987654443333344567899999999999999999999999999999999778899886


Q ss_pred             CH-HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         595 TH-EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       595 ~~-~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      +. +.+.+.+..+..++.|..+++++.+||.+||+.||++|||+++|+++|.
T Consensus       271 ~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         271 PVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             CCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            55 4555666777777788899999999999999999999999999999985


No 10 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.8e-53  Score=431.33  Aligned_cols=268  Identities=37%  Similarity=0.704  Sum_probs=228.2

Q ss_pred             cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec
Q psy5539         360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV  439 (653)
Q Consensus       360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~  439 (653)
                      +|+++++|++.+.||+|+||.||+|++..  ....+..||||.++........+.|.+|+.++++++|||||+++|++. 
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~--~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-   78 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMS--PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-   78 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECC--C--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEec--CCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            57888999999999999999999998753  234567899999987777777788999999999999999999999985 


Q ss_pred             CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539         440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC  519 (653)
Q Consensus       440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI  519 (653)
                      .+..++||||+++|+|.+++..                   ....+++..++.++.||++||+|||+++|+||||||+||
T Consensus        79 ~~~~~iv~E~~~~g~l~~~~~~-------------------~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NI  139 (273)
T d1mp8a_          79 ENPVWIIMELCTLGELRSFLQV-------------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNV  139 (273)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHH-------------------TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             cCeEEEEEEeccCCcHHhhhhc-------------------cCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhhe
Confidence            4678999999999999998862                   234689999999999999999999999999999999999


Q ss_pred             eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539         520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV  599 (653)
Q Consensus       520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~  599 (653)
                      |+++++.+||+|||+|+....... .......+|+.|||||.+.+..++.++|||||||++|||+++|.+||.+.+..++
T Consensus       140 ll~~~~~~Kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~  218 (273)
T d1mp8a_         140 LVSSNDCVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV  218 (273)
T ss_dssp             EEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             eecCCCcEEEccchhheeccCCcc-eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHH
Confidence            999999999999999987543322 2334456789999999999999999999999999999999988899999999999


Q ss_pred             HHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539         600 VKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD  650 (653)
Q Consensus       600 ~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~  650 (653)
                      ...+..+...+.+..+++++.+||.+||+.||++|||+++|+++|..+.++
T Consensus       219 ~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         219 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            999999988888999999999999999999999999999999999988765


No 11 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.5e-53  Score=431.36  Aligned_cols=256  Identities=37%  Similarity=0.708  Sum_probs=221.3

Q ss_pred             eeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceEEEEee
Q psy5539         371 RDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMCLLFEY  449 (653)
Q Consensus       371 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~LV~Ey  449 (653)
                      +.||+|+||+||+|.+..   ...++.||||+++... .....++|.+|+++|++++|||||+++|++.. +..+|||||
T Consensus        13 k~iG~G~fG~Vy~~~~~~---~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~   88 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQM---KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEM   88 (277)
T ss_dssp             EEEEECSSEEEEEEEEEC---SSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEEC
T ss_pred             CCcccCCCeEEEEEEEcc---CCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEc
Confidence            469999999999998642   3456889999997543 33456789999999999999999999999865 467899999


Q ss_pred             cCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCcEEE
Q psy5539         450 MGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMVVKI  529 (653)
Q Consensus       450 ~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~vkI  529 (653)
                      +++|+|.++++.                    ...+++..++.|+.||+.||+|||+++|+||||||+||||+.++.+||
T Consensus        89 ~~~g~L~~~l~~--------------------~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl  148 (277)
T d1xbba_          89 AELGPLNKYLQQ--------------------NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKI  148 (277)
T ss_dssp             CTTEEHHHHHHH--------------------CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEE
T ss_pred             CCCCcHHHHHhh--------------------ccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccc
Confidence            999999999972                    245899999999999999999999999999999999999999999999


Q ss_pred             eccCcccccccccc-ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc
Q psy5539         530 ADFGLSRKMYLQDY-YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIKEGNI  608 (653)
Q Consensus       530 ~DfGla~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~~~~~  608 (653)
                      +|||+++....... ........+|++|||||.+.+..++.++||||||+++|||+|.|.+||.+.+..++...+..+..
T Consensus       149 ~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~  228 (277)
T d1xbba_         149 SDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER  228 (277)
T ss_dssp             CCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC
T ss_pred             cchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCC
Confidence            99999987643322 22334557899999999999999999999999999999999988889999999999999999988


Q ss_pred             cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539         609 LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD  650 (653)
Q Consensus       609 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~  650 (653)
                      ++.|..+++++++||.+||+.||++|||+++|++.|.....+
T Consensus       229 ~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         229 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             CCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence            889999999999999999999999999999998888766443


No 12 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.5e-52  Score=433.15  Aligned_cols=289  Identities=38%  Similarity=0.671  Sum_probs=233.1

Q ss_pred             cccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeE
Q psy5539         358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGV  436 (653)
Q Consensus       358 ~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~  436 (653)
                      .+++++.++|++.+.||+|+||+||+|++.+.....+++.||||+++........+.+.+|+.++.++ +|+|||.++++
T Consensus         6 ~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~   85 (299)
T d1ywna1           6 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA   85 (299)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeee
Confidence            45678889999999999999999999998776666778999999998776666677788888888877 68999999999


Q ss_pred             Eec-CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539         437 CAV-GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA  515 (653)
Q Consensus       437 ~~~-~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk  515 (653)
                      +.. +...++||||+++|+|.++|+..........    ..........+++.+++.++.||++||+|||+++|+|||||
T Consensus        86 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlK  161 (299)
T d1ywna1          86 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK----VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  161 (299)
T ss_dssp             ECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC---------------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             eccCCCeEEEEEEecCCCcHHHHHHhccccccccc----cchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCC
Confidence            865 4568999999999999999985432111000    00011123568999999999999999999999999999999


Q ss_pred             CCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539         516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT  595 (653)
Q Consensus       516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~  595 (653)
                      |+||||++++.+||+|||+|+...............||+.|||||.+.++.++.++|||||||++|||++++.+||.+..
T Consensus       162 p~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~  241 (299)
T d1ywna1         162 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  241 (299)
T ss_dssp             GGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999999876544443344456789999999999999999999999999999999998888998765


Q ss_pred             -HHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539         596 -HEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD  650 (653)
Q Consensus       596 -~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~  650 (653)
                       .+++...+..+..+..++.+++++.+||.+||+.||++|||+++|+++|..+.+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         242 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             CSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence             4567777888888888899999999999999999999999999999999988653


No 13 
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-52  Score=425.20  Aligned_cols=255  Identities=36%  Similarity=0.727  Sum_probs=228.9

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM  443 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~  443 (653)
                      .++|++.+.||+|+||+||+|+.+      ++..||||+++.....  .++|.+|+.++++++|||||+++|++...+..
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~l~~~~~~--~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~   74 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWR------GQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI   74 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEET------TTEEEEEEEEESSSSC--HHHHHHHHHHHHTCCCTTBCCEEEEECCSSSE
T ss_pred             hHHCEEeEEEecCCCeEEEEEEEC------CCCEEEEEEECcCcCC--HHHHHHHHHHHHhcCCCceeeEEEEEeeCCce
Confidence            468889999999999999999973      3578999999765432  45799999999999999999999999999999


Q ss_pred             EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539         444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND  523 (653)
Q Consensus       444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~  523 (653)
                      ++||||+++|+|.+++..                   ....+++..+++++.||++||+|||+++|+||||||+|||+++
T Consensus        75 ~iv~Ey~~~g~l~~~~~~-------------------~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~  135 (258)
T d1k2pa_          75 FIITEYMANGCLLNYLRE-------------------MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVND  135 (258)
T ss_dssp             EEEEECCTTEEHHHHHHS-------------------GGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECT
T ss_pred             EEEEEccCCCcHHHhhhc-------------------cccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcC
Confidence            999999999999999862                   2345789999999999999999999999999999999999999


Q ss_pred             CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539         524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI  603 (653)
Q Consensus       524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i  603 (653)
                      ++.+||+|||+++....... .......+|+.|||||.+.+..++.++||||||+++|||+|++..||.+.+..++...+
T Consensus       136 ~~~~kl~DfG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i  214 (258)
T d1k2pa_         136 QGVVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI  214 (258)
T ss_dssp             TCCEEECCCSSCCBCSSSSC-CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH
T ss_pred             CCcEEECcchhheeccCCCc-eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHH
Confidence            99999999999986644332 23345678999999999999999999999999999999999888899999999999999


Q ss_pred             HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539         604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN  646 (653)
Q Consensus       604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~  646 (653)
                      .++..+..|..+++++.+||++||+.||++|||+++|+++|.+
T Consensus       215 ~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         215 AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            9998888899999999999999999999999999999999854


No 14 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-52  Score=433.66  Aligned_cols=279  Identities=43%  Similarity=0.798  Sum_probs=247.3

Q ss_pred             ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEe
Q psy5539         359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCA  438 (653)
Q Consensus       359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~  438 (653)
                      ++|++.++|.+.+.||+|+||+||+|.+.+..+..+++.||||+++..........|.+|+.++++++|||||+++|++.
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~   93 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   93 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence            46888999999999999999999999986654555678999999987666666778999999999999999999999999


Q ss_pred             cCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539         439 VGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN  518 (653)
Q Consensus       439 ~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N  518 (653)
                      ..+..++||||+++|+|.+++......          .........+++..+++++.|+|+||.|||+++|+||||||+|
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~----------~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~N  163 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRSLRPA----------MANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN  163 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHHHH----------HHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGG
T ss_pred             cCCceeEEEeecCCCCHHHHHHhcccc----------cccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCc
Confidence            999999999999999999999743210          0111233467999999999999999999999999999999999


Q ss_pred             EeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539         519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE  598 (653)
Q Consensus       519 ILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e  598 (653)
                      |||++++.+||+|||+|+.+.............+|+.|||||.+.++.++.++||||||+++|||+|++.+||.+.+..+
T Consensus       164 iLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~  243 (308)
T d1p4oa_         164 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ  243 (308)
T ss_dssp             EEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH
T ss_pred             eeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHH
Confidence            99999999999999999877655544444556789999999999999999999999999999999999889999999999


Q ss_pred             HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539         599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI  647 (653)
Q Consensus       599 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l  647 (653)
                      +...+.++..++.+..++..+.+||.+||+.+|++|||+++|+++|...
T Consensus       244 ~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         244 VLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            9999999998888999999999999999999999999999999988654


No 15 
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.2e-52  Score=421.84  Aligned_cols=254  Identities=24%  Similarity=0.391  Sum_probs=224.0

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK  441 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~  441 (653)
                      .++|++.+.||+|+||+||+|+..     .+++.||||+++...  .....+.+.+|++++++++|||||++++++.+++
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~   79 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREK-----QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT   79 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hhHeEEEEEEecCCCcEEEEEEEC-----CCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECC
Confidence            468999999999999999999964     356899999986432  1223567899999999999999999999999999


Q ss_pred             ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539         442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI  521 (653)
Q Consensus       442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl  521 (653)
                      ..++||||+++|+|.+++..                    ...+++..+..++.||+.||+|||+++|+||||||+|||+
T Consensus        80 ~~~ivmEy~~~g~L~~~l~~--------------------~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill  139 (263)
T d2j4za1          80 RVYLILEYAPLGTVYRELQK--------------------LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL  139 (263)
T ss_dssp             EEEEEEECCTTCBHHHHHHH--------------------HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred             EEEEEEeecCCCcHHHHHhh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee
Confidence            99999999999999999973                    2458999999999999999999999999999999999999


Q ss_pred             cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539         522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK  601 (653)
Q Consensus       522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~  601 (653)
                      ++++.+||+|||+|+.....    ......||+.|||||.+.+..++.++|||||||++|||++|. .||.+.+..++..
T Consensus       140 ~~~~~~kl~DFG~a~~~~~~----~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~-~Pf~~~~~~~~~~  214 (263)
T d2j4za1         140 GSAGELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK-PPFEANTYQETYK  214 (263)
T ss_dssp             CTTSCEEECCCCSCSCCCCC----CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS-CTTCCSSHHHHHH
T ss_pred             cCCCCEeecccceeeecCCC----cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCC-CCCCCCCHHHHHH
Confidence            99999999999999765322    123356899999999999999999999999999999999955 5999999999999


Q ss_pred             HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHH
Q psy5539         602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIK  648 (653)
Q Consensus       602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~  648 (653)
                      .+..+.. ..|+.+++++.+|+.+||+.||++|||++|+++|+|--.
T Consensus       215 ~i~~~~~-~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         215 RISRVEF-TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             HHHTTCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             HHHcCCC-CCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            9888764 567889999999999999999999999999999998543


No 16 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-51  Score=432.10  Aligned_cols=266  Identities=34%  Similarity=0.620  Sum_probs=227.0

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM  443 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~  443 (653)
                      .++|++++.||+|+||+||+|++... .......||||+++........++|.+|++++++++|||||+++|++..+ ..
T Consensus         8 ~~dy~~~~~lG~G~fG~Vy~~~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~   85 (317)
T d1xkka_           8 ETEFKKIKVLGSGAFGTVYKGLWIPE-GEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV   85 (317)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECC-----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SE
T ss_pred             HHHCEEeeEEecCCCeEEEEEEEcCC-CCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-Ce
Confidence            35799999999999999999987532 11223579999998765555677899999999999999999999999864 56


Q ss_pred             EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539         444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND  523 (653)
Q Consensus       444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~  523 (653)
                      ++++||+.+|+|.+++..                   ....+++..+++++.|||.||+|||+++|+||||||+||||+.
T Consensus        86 ~~v~e~~~~~~l~~~~~~-------------------~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~  146 (317)
T d1xkka_          86 QLITQLMPFGCLLDYVRE-------------------HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT  146 (317)
T ss_dssp             EEEEECCTTCBHHHHHHH-------------------TSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE
T ss_pred             eEEEEeccCCcccccccc-------------------cccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCC
Confidence            788999999999998862                   2356899999999999999999999999999999999999999


Q ss_pred             CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539         524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI  603 (653)
Q Consensus       524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i  603 (653)
                      ++.+||+|||+|+...............+|+.|||||.+.++.++.++||||||+++|||+|++.+||.+.+..++...+
T Consensus       147 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i  226 (317)
T d1xkka_         147 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL  226 (317)
T ss_dssp             TTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHH
T ss_pred             CCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence            99999999999987755444334445568999999999999999999999999999999999889999999999999999


Q ss_pred             HcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539         604 KEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD  650 (653)
Q Consensus       604 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~  650 (653)
                      ..+..++.|+.+++++.+|+.+||+.||++|||+++|+++|..+.++
T Consensus       227 ~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~  273 (317)
T d1xkka_         227 EKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  273 (317)
T ss_dssp             HHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence            99988888899999999999999999999999999999999887654


No 17 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.3e-52  Score=426.50  Aligned_cols=257  Identities=23%  Similarity=0.397  Sum_probs=215.4

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEec--CC
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAV--GK  441 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~--~~  441 (653)
                      ++|++++.||+|+||+||+|+..     .+++.||||.++... .+...+.+.+|++++++++|||||++++++.+  .+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   78 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRK-----SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT   78 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----
T ss_pred             hhCEEeEEEecCCCeEEEEEEEC-----CCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCC
Confidence            57999999999999999999864     456889999987543 44556779999999999999999999999864  45


Q ss_pred             ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCC-----ceecCCCC
Q psy5539         442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRK-----FVHRDLAT  516 (653)
Q Consensus       442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~-----ivHrDLkp  516 (653)
                      .++|||||+++|+|.+++....                .....+++..++.++.||+.||+|||+++     |+||||||
T Consensus        79 ~~~ivmEy~~~g~L~~~i~~~~----------------~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp  142 (269)
T d2java1          79 TLYIVMEYCEGGDLASVITKGT----------------KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKP  142 (269)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHH----------------HHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCG
T ss_pred             EEEEEEecCCCCcHHHHHHhcc----------------ccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCch
Confidence            6899999999999999997322                12356899999999999999999999875     99999999


Q ss_pred             CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539         517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH  596 (653)
Q Consensus       517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~  596 (653)
                      +||||++++.+||+|||+|+......  .......+|+.|||||.+.+..++.++|||||||++|||++| .+||.+.+.
T Consensus       143 ~NIll~~~~~vkl~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg-~~Pf~~~~~  219 (269)
T d2java1         143 ANVFLDGKQNVKLGDFGLARILNHDT--SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCAL-MPPFTAFSQ  219 (269)
T ss_dssp             GGEEECTTSCEEECCHHHHHHC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCSCCCSSH
T ss_pred             hhcCcCCCCcEEEeeccceeecccCC--CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhC-CCCCCCCCH
Confidence            99999999999999999998764322  122345789999999999999999999999999999999995 569999999


Q ss_pred             HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       597 ~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      .++...+..+.....+..+++++.+|+++||+.||++|||++||++|+|
T Consensus       220 ~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~  268 (269)
T d2java1         220 KELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL  268 (269)
T ss_dssp             HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             HHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCc
Confidence            9999999999888888899999999999999999999999999999875


No 18 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.5e-51  Score=424.49  Aligned_cols=288  Identities=41%  Similarity=0.737  Sum_probs=241.9

Q ss_pred             cccccCCCCeeEEeeecccCCeeEEEEEeCCCCCC--ccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEE
Q psy5539         358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKH--EEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLL  434 (653)
Q Consensus       358 ~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~--~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~  434 (653)
                      .+++++.++|++.+.||+|+||.||+|+..+..+.  ..+..||||+++.........++.+|+..+.++ +|||||+++
T Consensus         6 ~~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~   85 (299)
T d1fgka_           6 PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL   85 (299)
T ss_dssp             TTTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecc
Confidence            44678899999999999999999999987553322  345789999998877777778899999999888 899999999


Q ss_pred             eEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy5539         435 GVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDL  514 (653)
Q Consensus       435 g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDL  514 (653)
                      +++..++..++||||+++|+|.++|+.........    ...........+++.+++.++.||+.||+|||+++||||||
T Consensus        86 ~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDi  161 (299)
T d1fgka_          86 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY----SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL  161 (299)
T ss_dssp             EEECSSSSCEEEECCCTTCBHHHHHHTTSCC----------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             cccccCCeEEEEEEccCCCcHHHHHHhhcCCcccc----ccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeee
Confidence            99999999999999999999999998554322100    00111123467899999999999999999999999999999


Q ss_pred             CCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539         515 ATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL  594 (653)
Q Consensus       515 kp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~  594 (653)
                      ||+|||++.++.+||+|||+++...............+++.|||||.+.++.++.++||||||+++|||++++.+||.+.
T Consensus       162 Kp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~  241 (299)
T d1fgka_         162 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV  241 (299)
T ss_dssp             SGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             cccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCC
Confidence            99999999999999999999987755544444555678899999999999999999999999999999999889999999


Q ss_pred             CHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539         595 THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR  649 (653)
Q Consensus       595 ~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~  649 (653)
                      +.+++.+.+.++..+..|..+++++.+|+.+||+.||++|||+.+|++.|.++..
T Consensus       242 ~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         242 PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             CHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            9999999999998888899999999999999999999999999999999988753


No 19 
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.2e-52  Score=423.55  Aligned_cols=255  Identities=24%  Similarity=0.334  Sum_probs=212.3

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC  444 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~  444 (653)
                      ++|++.+.||+|+||+||+|+..     .+++.||||+++........+.+.+|++++++++|||||++++++..++..+
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~   79 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY   79 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             cceEEEEEEecCcCeEEEEEEEC-----CCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeE
Confidence            57999999999999999999864     3568999999976554445567999999999999999999999999999999


Q ss_pred             EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539         445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ  524 (653)
Q Consensus       445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~  524 (653)
                      |||||+++|+|.++|+                    ....+++.++..++.||++||+|||+++|+||||||+|||++++
T Consensus        80 ivmEy~~gg~L~~~l~--------------------~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~  139 (271)
T d1nvra_          80 LFLEYCSGGELFDRIE--------------------PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER  139 (271)
T ss_dssp             EEEECCTTEEGGGGSB--------------------TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             EEEeccCCCcHHHHHh--------------------cCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCC
Confidence            9999999999999885                    23468999999999999999999999999999999999999999


Q ss_pred             CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHH
Q psy5539         525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKY-TVESDVWAFGVCLWEIFSFALQPYYGLTH-EEVVKY  602 (653)
Q Consensus       525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-t~ksDVwSlGvvl~ellt~~~~p~~~~~~-~e~~~~  602 (653)
                      +.+||+|||+|+.....+.........||+.|||||.+.+..+ +.++|||||||++|||++|. +||.+... ......
T Consensus       140 ~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~-~pf~~~~~~~~~~~~  218 (271)
T d1nvra_         140 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE-LPWDQPSDSCQEYSD  218 (271)
T ss_dssp             CCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSS-CSCSSSSTTSHHHHH
T ss_pred             CCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCC-CCCCCCChHHHHHHH
Confidence            9999999999987654444444456679999999999988876 57899999999999999955 57765443 233333


Q ss_pred             HHcCC-ccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         603 IKEGN-ILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       603 i~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      +.... .......+++++.+|+.+||+.||++|||++|+++|.|
T Consensus       219 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpw  262 (271)
T d1nvra_         219 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW  262 (271)
T ss_dssp             HHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred             HhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHh
Confidence            33332 23333568899999999999999999999999999877


No 20 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.5e-51  Score=423.98  Aligned_cols=292  Identities=39%  Similarity=0.679  Sum_probs=247.3

Q ss_pred             ccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEE
Q psy5539         359 QLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVC  437 (653)
Q Consensus       359 ~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~  437 (653)
                      .++++.++|++.+.||+|+||.||+|++.+..+..+++.||||+++..........|.+|+.+++++ +|||||+++|++
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~   96 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            5688899999999999999999999998766666788999999998776666677899999999999 699999999999


Q ss_pred             ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539         438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR  517 (653)
Q Consensus       438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~  517 (653)
                      ..++..+|||||+++|+|.++|+...........  ...........+++..+++++.||+.||+|||+++++||||||+
T Consensus        97 ~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~  174 (311)
T d1t46a_          97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT--SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR  174 (311)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC----------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             eeCCEEEEEEEcCCCCCHHHHHHhcccccccccc--ccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccc
Confidence            9999999999999999999999866543221110  01111234467999999999999999999999999999999999


Q ss_pred             CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH-
Q psy5539         518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH-  596 (653)
Q Consensus       518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~-  596 (653)
                      |||++.++.+||+|||+++...............+|+.|||||.+.++.++.++||||||+++|||+|++.+|+.+.+. 
T Consensus       175 NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~  254 (311)
T d1t46a_         175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD  254 (311)
T ss_dssp             GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred             cccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999999998765444444445567899999999999999999999999999999999988888877665 


Q ss_pred             HHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHhh
Q psy5539         597 EEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDLE  652 (653)
Q Consensus       597 ~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l~  652 (653)
                      +.+.+.+..+..+..+..+++++.+||.+||+.||++|||+++|++.|+++..+-.
T Consensus       255 ~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~~~  310 (311)
T d1t46a_         255 SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST  310 (311)
T ss_dssp             HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhccCC
Confidence            44556677777777888899999999999999999999999999999998776644


No 21 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-51  Score=423.25  Aligned_cols=264  Identities=35%  Similarity=0.640  Sum_probs=225.8

Q ss_pred             cccccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEE
Q psy5539         358 EQLEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVC  437 (653)
Q Consensus       358 ~~~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~  437 (653)
                      ..++++.++|++.+.||+|+||+||+|++.+      ...||||+++.....  .+.|.+|+.++++++|||||+++|++
T Consensus        10 ~~~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~------~~~vAiK~l~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~g~~   81 (285)
T d1fmka3          10 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNG------TTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVV   81 (285)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEETT------TEEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cceEcCHHHEEEeeEEeeCCCeEEEEEEECC------CCEEEEEEECcccCC--HHHHHHHHHHHHhcccCCEeEEEEEE
Confidence            4567888899999999999999999998742      357999999765432  45799999999999999999999998


Q ss_pred             ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539         438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR  517 (653)
Q Consensus       438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~  517 (653)
                      . .+..++||||+++|+|.+++...                  ....+++.+++.|+.||+.||+|||+++|+||||||+
T Consensus        82 ~-~~~~~lv~Ey~~~g~l~~~~~~~------------------~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~  142 (285)
T d1fmka3          82 S-EEPIYIVTEYMSKGSLLDFLKGE------------------TGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAA  142 (285)
T ss_dssp             C-SSSCEEEECCCTTCBHHHHHSHH------------------HHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             e-cCCeEEEEEecCCCchhhhhhhc------------------ccccchHHHHHHHHHHHHHHHHHHhhhheecccccce
Confidence            5 45689999999999999998622                  2245899999999999999999999999999999999


Q ss_pred             CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539         518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE  597 (653)
Q Consensus       518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~  597 (653)
                      ||||++++.+||+|||+++...... ........+|+.|+|||.+..+.++.++||||||+++|||++++.+|+.+....
T Consensus       143 NIll~~~~~~kl~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~  221 (285)
T d1fmka3         143 NILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  221 (285)
T ss_dssp             GEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             EEEECCCCcEEEcccchhhhccCCC-ceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999999998654332 233344678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539         598 EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR  649 (653)
Q Consensus       598 e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~  649 (653)
                      +++..+..+...+.+..+++++.+|+.+||+.||++|||+++|++.|.....
T Consensus       222 ~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         222 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             HHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence            9999999888788889999999999999999999999999999988876543


No 22 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-51  Score=418.90  Aligned_cols=258  Identities=35%  Similarity=0.669  Sum_probs=222.9

Q ss_pred             cccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec
Q psy5539         360 LEFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV  439 (653)
Q Consensus       360 ~e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~  439 (653)
                      +++..++|++.+.||+|+||.||+|++.       ++.||||+++.+.   ..++|.+|++++++++|||||+++|++..
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~~-------~~~vAvK~i~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~   71 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDYR-------GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVE   71 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET-------TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECC
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEEC-------CeEEEEEEECcHH---HHHHHHHHHHHHHhCCCCCEeeEEEEEEe
Confidence            5677889999999999999999999974       3679999997643   34578999999999999999999999865


Q ss_pred             -CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539         440 -GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN  518 (653)
Q Consensus       440 -~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N  518 (653)
                       .+.++|||||+++|+|.++|....                  ...+++..+++|+.||+.||+|||+.+|+||||||+|
T Consensus        72 ~~~~~~lv~ey~~~g~L~~~l~~~~------------------~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~N  133 (262)
T d1byga_          72 EKGGLYIVTEYMAKGSLVDYLRSRG------------------RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN  133 (262)
T ss_dssp             C--CCEEEECCCTTEEHHHHHHHHH------------------HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             cCCcEEEEEeccCCCCHHHHHHhcC------------------CCCCCHHHHHHHHHHHHhhccccccCceeccccchHh
Confidence             466899999999999999996321                  1247899999999999999999999999999999999


Q ss_pred             EeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539         519 CLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE  598 (653)
Q Consensus       519 ILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e  598 (653)
                      ||++.++.+||+|||+++....     ......+|..|||||.+.++.+|.++||||||+++|||+|++.+|+.+.+..+
T Consensus       134 il~~~~~~~kl~dfg~s~~~~~-----~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~  208 (262)
T d1byga_         134 VLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  208 (262)
T ss_dssp             EEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG
T ss_pred             heecCCCCEeecccccceecCC-----CCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH
Confidence            9999999999999999986532     22334568899999999999999999999999999999998889999999999


Q ss_pred             HHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539         599 VVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD  650 (653)
Q Consensus       599 ~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~  650 (653)
                      +...+..+..++.+..+++++++|+++||+.||.+|||+.+|+++|..+++.
T Consensus       209 ~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         209 VVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             HHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence            9999999888889999999999999999999999999999999999998753


No 23 
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.1e-51  Score=419.38  Aligned_cols=252  Identities=21%  Similarity=0.381  Sum_probs=217.7

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM  443 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~  443 (653)
                      .++|++.+.||+|+||+||+|+..     .+++.||||+++..... ..+.+.+|++++++++|||||++++++..++..
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~-----~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   92 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDV-----ATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDEL   92 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBT-----TTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEEC-----CCCCEEEEEEEecccCh-HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEE
Confidence            357899999999999999999863     45689999998754322 245789999999999999999999999999999


Q ss_pred             EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539         444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND  523 (653)
Q Consensus       444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~  523 (653)
                      +|||||+++|+|.+++..                     ..+++.++..++.||+.||+|||++||+||||||+|||++.
T Consensus        93 ~ivmEy~~gg~L~~~~~~---------------------~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~  151 (293)
T d1yhwa1          93 WVVMEYLAGGSLTDVVTE---------------------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM  151 (293)
T ss_dssp             EEEEECCTTCBHHHHHHH---------------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             EEEEEecCCCcHHHHhhc---------------------cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECC
Confidence            999999999999998751                     34899999999999999999999999999999999999999


Q ss_pred             CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539         524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI  603 (653)
Q Consensus       524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i  603 (653)
                      ++.+||+|||+|+.+....  .......||+.|||||.+.+..++.++|||||||++|||++| .+||.+.+..+....+
T Consensus       152 ~~~vkl~DFG~a~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG-~~Pf~~~~~~~~~~~~  228 (293)
T d1yhwa1         152 DGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG-EPPYLNENPLRALYLI  228 (293)
T ss_dssp             TCCEEECCCTTCEECCSTT--CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHS-SCTTTTSCHHHHHHHH
T ss_pred             CCcEeeccchhheeecccc--ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhC-CCCCCCCCHHHHHHHH
Confidence            9999999999998764332  223455789999999999999999999999999999999995 5699888877766665


Q ss_pred             HcCCc--cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         604 KEGNI--LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       604 ~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      .....  ...+..+++++.+|+.+||+.||++|||++|+++|.|
T Consensus       229 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~  272 (293)
T d1yhwa1         229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF  272 (293)
T ss_dssp             HHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGG
T ss_pred             HhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence            44332  3445678999999999999999999999999999876


No 24 
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.4e-51  Score=421.85  Aligned_cols=253  Identities=27%  Similarity=0.404  Sum_probs=217.9

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC  444 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~  444 (653)
                      +.|++++.||+|+||+||+|+..     .++..||||+++..... ..+.+.+|+++|++++|||||++++++...+..+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~   85 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNK-----ETSVLAAAKVIDTKSEE-ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW   85 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECSSSG-GGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEEC-----CCCeEEEEEEECcCCHH-HHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEE
Confidence            46899999999999999999864     35688999998754332 3457899999999999999999999999999999


Q ss_pred             EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539         445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ  524 (653)
Q Consensus       445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~  524 (653)
                      |||||+++|+|.+++..                   ....+++.++..++.||+.||+|||+++|+||||||+|||++.+
T Consensus        86 lvmEy~~~g~L~~~~~~-------------------~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~  146 (288)
T d2jfla1          86 ILIEFCAGGAVDAVMLE-------------------LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD  146 (288)
T ss_dssp             EEEECCTTEEHHHHHHH-------------------HTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT
T ss_pred             EEEecCCCCcHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCC
Confidence            99999999999999862                   22458999999999999999999999999999999999999999


Q ss_pred             CcEEEeccCccccccccccccCCCCCCCccccccchhhc-----cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539         525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESIL-----YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV  599 (653)
Q Consensus       525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~  599 (653)
                      +.+||+|||+|+......  .......||+.|||||.+.     ...++.++|||||||++|||++| .+||.+.+..++
T Consensus       147 ~~~Kl~DFG~a~~~~~~~--~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg-~~Pf~~~~~~~~  223 (288)
T d2jfla1         147 GDIKLADFGVSAKNTRTI--QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI-EPPHHELNPMRV  223 (288)
T ss_dssp             SCEEECCCTTCEECHHHH--HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHS-SCTTTTSCGGGH
T ss_pred             CCEEEEechhhhccCCCc--ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhC-CCCCCCCCHHHH
Confidence            999999999997653222  1223457899999999984     45689999999999999999995 469999888888


Q ss_pred             HHHHHcCCcc--CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         600 VKYIKEGNIL--QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       600 ~~~i~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      +..+..+...  ..+..+++++.+||.+||+.||++|||++|+++|.|
T Consensus       224 ~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~  271 (288)
T d2jfla1         224 LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPF  271 (288)
T ss_dssp             HHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGG
T ss_pred             HHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence            8888776543  345678999999999999999999999999999865


No 25 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.6e-50  Score=417.42  Aligned_cols=263  Identities=36%  Similarity=0.699  Sum_probs=223.8

Q ss_pred             eEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEec-CCceEEE
Q psy5539         368 IYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV-GKPMCLL  446 (653)
Q Consensus       368 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~-~~~~~LV  446 (653)
                      .+.+.||+|+||+||+|++..  .......||||+++........++|.+|+++|++++|||||+++|++.. +...++|
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~--~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv  107 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLD--NDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  107 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC------CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEEC--CCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEE
Confidence            346789999999999999753  2223457999999876667677889999999999999999999999865 5688999


Q ss_pred             EeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCCCc
Q psy5539         447 FEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQMV  526 (653)
Q Consensus       447 ~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~~~  526 (653)
                      |||+++|+|.++++.                   ....+++..+++++.|++.||.|||+.+|+||||||+||||++++.
T Consensus       108 ~E~~~~g~l~~~~~~-------------------~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~  168 (311)
T d1r0pa_         108 LPYMKHGDLRNFIRN-------------------ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT  168 (311)
T ss_dssp             EECCTTCBHHHHHHC-------------------TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCC
T ss_pred             EEEeecCchhhhhcc-------------------ccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCC
Confidence            999999999999872                   2345778899999999999999999999999999999999999999


Q ss_pred             EEEeccCcccccccccccc--CCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Q psy5539         527 VKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYIK  604 (653)
Q Consensus       527 vkI~DfGla~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i~  604 (653)
                      +||+|||+++.........  ......+|..|+|||.+..+.++.++||||||+++|||++++.+|+...+..++...+.
T Consensus       169 ~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~  248 (311)
T d1r0pa_         169 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL  248 (311)
T ss_dssp             EEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHH
T ss_pred             EEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Confidence            9999999998765433222  22345678999999999999999999999999999999999998888888888888899


Q ss_pred             cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q psy5539         605 EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL  651 (653)
Q Consensus       605 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l  651 (653)
                      .+..+..|+.+++++.+||.+||+.||++|||+.||+++|..+.+..
T Consensus       249 ~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~  295 (311)
T d1r0pa_         249 QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  295 (311)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             cCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhh
Confidence            99888888999999999999999999999999999999999987653


No 26 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.2e-51  Score=418.85  Aligned_cols=254  Identities=20%  Similarity=0.300  Sum_probs=218.8

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP  442 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~  442 (653)
                      ++|++.+.||+|+||+||+|+..     .+++.||||+++...  .+...+.+.+|++++++++|||||++++++.+++.
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~   82 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLAREL-----ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK   82 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCE
Confidence            57999999999999999999864     356889999986432  12234578999999999999999999999999999


Q ss_pred             eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539         443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN  522 (653)
Q Consensus       443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~  522 (653)
                      .+|||||+++|+|.+++..                    .+.+++..+..++.|++.||+|||+++|+||||||+|||++
T Consensus        83 ~~ivmEy~~gg~L~~~~~~--------------------~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~  142 (288)
T d1uu3a_          83 LYFGLSYAKNGELLKYIRK--------------------IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN  142 (288)
T ss_dssp             EEEEECCCTTEEHHHHHHH--------------------HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred             EEEEEEccCCCCHHHhhhc--------------------cCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccC
Confidence            9999999999999999873                    24589999999999999999999999999999999999999


Q ss_pred             CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539         523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY  602 (653)
Q Consensus       523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~  602 (653)
                      +++.+||+|||+|+.+.............||+.|||||.+.+..++.++|||||||++|||++| ..||.+.+..++...
T Consensus       143 ~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g-~~Pf~~~~~~~~~~~  221 (288)
T d1uu3a_         143 EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG-LPPFRAGNEYLIFQK  221 (288)
T ss_dssp             TTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHH
T ss_pred             CCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhC-CCCCCCcCHHHHHHH
Confidence            9999999999999876433333333445789999999999999999999999999999999995 569999999999999


Q ss_pred             HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      +..+.. ..|+.+++++.+|+++||+.||++|||++|++++.+
T Consensus       222 i~~~~~-~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~  263 (288)
T d1uu3a_         222 IIKLEY-DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP  263 (288)
T ss_dssp             HHTTCC-CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHH
T ss_pred             HHcCCC-CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHH
Confidence            888764 567889999999999999999999999998765544


No 27 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-50  Score=413.71  Aligned_cols=264  Identities=34%  Similarity=0.614  Sum_probs=216.1

Q ss_pred             cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEec
Q psy5539         362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAV  439 (653)
Q Consensus       362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~  439 (653)
                      +..++|++.+.||+|+||.||+|+...  .......||||+++...  .+...++|.+|+.++++++|||||+++|++.+
T Consensus         5 i~~~d~~~~~~iG~G~fg~Vy~~~~~~--~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~   82 (273)
T d1u46a_           5 IGEKDLRLLEKLGDGSFGVVRRGEWDA--PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT   82 (273)
T ss_dssp             CCGGGEEEEEECC----CCCEEEEEEC--TTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             EchHHeEEEEEEecCCCeEEEEEEEEC--CCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            345689999999999999999998743  23345689999987542  33455689999999999999999999999965


Q ss_pred             CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539         440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC  519 (653)
Q Consensus       440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI  519 (653)
                       +..++||||+++|+|.+++...                   ...+++..++.++.|||.||.|||+++|+||||||+||
T Consensus        83 -~~~~lv~e~~~~~~l~~~~~~~-------------------~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NI  142 (273)
T d1u46a_          83 -PPMKMVTELAPLGSLLDRLRKH-------------------QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL  142 (273)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHH-------------------GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             -cchheeeeeecCcchhhhhhcc-------------------cCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHh
Confidence             5678999999999999988622                   24589999999999999999999999999999999999


Q ss_pred             eEcCCCcEEEeccCcccccccccc-ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539         520 LINDQMVVKIADFGLSRKMYLQDY-YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE  598 (653)
Q Consensus       520 Ll~~~~~vkI~DfGla~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e  598 (653)
                      ||+.++.+||+|||+++....... ........+|..|+|||.+.+..++.++||||||+++|||+|+|.+||.+.+..+
T Consensus       143 ll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~  222 (273)
T d1u46a_         143 LLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ  222 (273)
T ss_dssp             EEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             ccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH
Confidence            999999999999999987643322 2223344578899999999999999999999999999999997788999999999


Q ss_pred             HHHHHHcC-CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539         599 VVKYIKEG-NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI  647 (653)
Q Consensus       599 ~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l  647 (653)
                      +...+... ..++.++.++.++.+|+.+||+.||++|||+++|++.|.+.
T Consensus       223 ~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         223 ILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            88887554 45667788999999999999999999999999999888765


No 28 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-50  Score=419.89  Aligned_cols=279  Identities=39%  Similarity=0.662  Sum_probs=231.0

Q ss_pred             cCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEecC
Q psy5539         362 FPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAVG  440 (653)
Q Consensus       362 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~~  440 (653)
                      +..++|++.+.||+|+||+||+|++.+   ......||||+++........++|.+|+++|+++ +|||||+++|++..+
T Consensus         7 i~~~~~~~~~~iG~G~fg~Vy~~~~~~---~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~   83 (309)
T d1fvra_           7 LDWNDIKFQDVIGEGNFGQVLKARIKK---DGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR   83 (309)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEE---TTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET
T ss_pred             cCHHHcEEEEEEeeCCCcEEEEEEECC---CCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecC
Confidence            445789999999999999999998742   1223468899987655555667899999999999 799999999999999


Q ss_pred             CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539         441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL  520 (653)
Q Consensus       441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL  520 (653)
                      +..++||||+++|+|.++|+........    ............+++..+++++.|||.||.|||+++|+||||||+|||
T Consensus        84 ~~~~iV~ey~~~g~L~~~l~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL  159 (309)
T d1fvra_          84 GYLYLAIEYAPHGNLLDFLRKSRVLETD----PAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNIL  159 (309)
T ss_dssp             TEEEEEECCCTTCBHHHHHHTTCHHHHC----HHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             CeeEEEEEecCCCcHHHHHhhccccccc----hhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEE
Confidence            9999999999999999999733210000    000001123467999999999999999999999999999999999999


Q ss_pred             EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539         521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV  600 (653)
Q Consensus       521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~  600 (653)
                      ++.++.+||+|||+++.....   .......+|..|+|||.+.++.++.++||||||+++|||++|+.+||.+.+..++.
T Consensus       160 ~~~~~~~kl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~  236 (309)
T d1fvra_         160 VGENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY  236 (309)
T ss_dssp             ECGGGCEEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             EcCCCceEEcccccccccccc---ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            999999999999999754322   22234567899999999999999999999999999999999988899999999999


Q ss_pred             HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHH
Q psy5539         601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRD  650 (653)
Q Consensus       601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~  650 (653)
                      +.+.++..+..+..+++++.+||.+||+.||++|||+++|+++|..+.++
T Consensus       237 ~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         237 EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             HHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            99999888888889999999999999999999999999999999988765


No 29 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-50  Score=421.95  Aligned_cols=258  Identities=23%  Similarity=0.376  Sum_probs=214.7

Q ss_pred             ccCCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539         361 EFPRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG  440 (653)
Q Consensus       361 e~~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~  440 (653)
                      |+..++|++++.||+|+||+||+|+..     .++..||+|+++........+.+.+|+.+|++++|||||++++++...
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~   76 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVSHK-----PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD   76 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEEET-----TTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECS
T ss_pred             CCCccCCEEEEEEecCCCeEEEEEEEC-----CCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            566789999999999999999999864     467899999997665555667899999999999999999999999999


Q ss_pred             CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCCE
Q psy5539         441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDR-KFVHRDLATRNC  519 (653)
Q Consensus       441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~-~ivHrDLkp~NI  519 (653)
                      +..+|||||+++|+|.++++..                    ..+++..+..++.||+.||.|||++ +|+||||||+||
T Consensus        77 ~~~~iVmEy~~gg~L~~~l~~~--------------------~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NI  136 (322)
T d1s9ja_          77 GEISICMEHMDGGSLDQVLKKA--------------------GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI  136 (322)
T ss_dssp             SEEEEEEECCTTEEHHHHHHHH--------------------SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGE
T ss_pred             CEEEEEEEcCCCCcHHHHHhhc--------------------CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHe
Confidence            9999999999999999999732                    3589999999999999999999975 999999999999


Q ss_pred             eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Q psy5539         520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEV  599 (653)
Q Consensus       520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~  599 (653)
                      ||++++.+||+|||+|+.....    ......||+.|||||++.+..|+.++|||||||++|||++|. .||.+.+..+.
T Consensus       137 Ll~~~~~vkl~DFGla~~~~~~----~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~-~Pf~~~~~~~~  211 (322)
T d1s9ja_         137 LVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR-YPIPPPDAKEL  211 (322)
T ss_dssp             EECTTCCEEECCCCCCHHHHHH----TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSS-CCSSCCCTTHH
T ss_pred             eECCCCCEEEeeCCCccccCCC----ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCC-CCCCCCCHHHH
Confidence            9999999999999999865322    223457899999999999999999999999999999999954 58865543221


Q ss_pred             ------------------------------------------HHHHHcCCccCCC-CCCcHHHHHHHHHhhccCCCCCCC
Q psy5539         600 ------------------------------------------VKYIKEGNILQAP-DNTPDALYDLMKLCWNMKPMNRPS  636 (653)
Q Consensus       600 ------------------------------------------~~~i~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs  636 (653)
                                                                ...+........+ ...+.++.+|+.+||..||.+|||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t  291 (322)
T d1s9ja_         212 ELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERAD  291 (322)
T ss_dssp             HHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcC
Confidence                                                      1111111111122 235789999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q psy5539         637 FRTIYQTLWNIK  648 (653)
Q Consensus       637 ~~eil~~L~~l~  648 (653)
                      ++|+++|+|--.
T Consensus       292 a~e~L~Hpf~~~  303 (322)
T d1s9ja_         292 LKQLMVHAFIKR  303 (322)
T ss_dssp             HHHHHTSHHHHH
T ss_pred             HHHHhhCHhhCc
Confidence            999999988544


No 30 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=8e-50  Score=415.57  Aligned_cols=249  Identities=21%  Similarity=0.374  Sum_probs=215.9

Q ss_pred             CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539         366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM  443 (653)
Q Consensus       366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~  443 (653)
                      .|+.++.||+|+||+||+|+..     .+++.||||+++...  .....+.+.+|+.+|++++|||||++++++..++..
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~   90 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDV-----RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTA   90 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEET-----TTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             hcEeeEEEecCCCeEEEEEEEC-----CCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEE
Confidence            4899999999999999999864     457899999986543  334456799999999999999999999999999999


Q ss_pred             EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539         444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND  523 (653)
Q Consensus       444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~  523 (653)
                      +|||||+.+|+|..++.                    ....+++.+++.++.||+.||.|||+++|+||||||+||||++
T Consensus        91 ~iv~E~~~~g~l~~~~~--------------------~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~  150 (309)
T d1u5ra_          91 WLVMEYCLGSASDLLEV--------------------HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE  150 (309)
T ss_dssp             EEEEECCSEEHHHHHHH--------------------HTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET
T ss_pred             EEEEEecCCCchHHHHH--------------------hCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECC
Confidence            99999999999977664                    2346899999999999999999999999999999999999999


Q ss_pred             CCcEEEeccCccccccccccccCCCCCCCccccccchhhcc---CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539         524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY---NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV  600 (653)
Q Consensus       524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~  600 (653)
                      ++.+||+|||+|+...      ......||+.|||||.+.+   +.|+.++|||||||++|||++|. .||.+.+..+.+
T Consensus       151 ~~~~Kl~DFG~a~~~~------~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~-~Pf~~~~~~~~~  223 (309)
T d1u5ra_         151 PGLVKLGDFGSASIMA------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK-PPLFNMNAMSAL  223 (309)
T ss_dssp             TTEEEECCCTTCBSSS------SBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSS-CTTTTSCHHHHH
T ss_pred             CCCEEEeecccccccC------CCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCC-CCCCCCCHHHHH
Confidence            9999999999997642      2234578999999999864   46899999999999999999955 599888888887


Q ss_pred             HHHHcCCccCC-CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539         601 KYIKEGNILQA-PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN  646 (653)
Q Consensus       601 ~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~  646 (653)
                      ..+..+..... +..+++++.+|+.+||+.||.+|||++++++|.|-
T Consensus       224 ~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~  270 (309)
T d1u5ra_         224 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV  270 (309)
T ss_dssp             HHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred             HHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHh
Confidence            77777655433 45689999999999999999999999999988764


No 31 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=4.2e-50  Score=417.46  Aligned_cols=253  Identities=25%  Similarity=0.359  Sum_probs=205.4

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM  443 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~  443 (653)
                      .+.|++.+.||+|+||+||+|+..     .+++.||||++.........+.+.+|+.+|++++|||||++++++..++..
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~   82 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDK-----RTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHL   82 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEET-----TTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEEEEEEeeccCeEEEEEEEC-----CCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            456999999999999999999864     356889999997655444556789999999999999999999999999999


Q ss_pred             EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc-
Q psy5539         444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN-  522 (653)
Q Consensus       444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~-  522 (653)
                      +|||||+++|+|.++|.                    ....+++.++..++.||+.||+|||+++|+||||||+|||+. 
T Consensus        83 ~lvmE~~~gg~L~~~l~--------------------~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~  142 (307)
T d1a06a_          83 YLIMQLVSGGELFDRIV--------------------EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS  142 (307)
T ss_dssp             EEEECCCCSCBHHHHHH--------------------TCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESS
T ss_pred             EEEEeccCCCcHHHhhh--------------------cccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecc
Confidence            99999999999999996                    234689999999999999999999999999999999999994 


Q ss_pred             --CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539         523 --DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV  600 (653)
Q Consensus       523 --~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~  600 (653)
                        +++.+||+|||+|+......   ......||+.|||||.+.+..++.++|||||||++|||++| .+||.+.+..++.
T Consensus       143 ~~~~~~vkl~DFG~a~~~~~~~---~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g-~~Pf~~~~~~~~~  218 (307)
T d1a06a_         143 LDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDAKLF  218 (307)
T ss_dssp             SSTTCCEEECCC---------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHH
T ss_pred             cCCCceEEEeccceeEEccCCC---eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhC-CCCCCCCCHHHHH
Confidence              57899999999998653222   22345689999999999999999999999999999999994 5699999999999


Q ss_pred             HHHHcCCccC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         601 KYIKEGNILQ---APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       601 ~~i~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      ..+..+....   .+..+++++.+|+.+||+.||++|||++|+++|+|
T Consensus       219 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~  266 (307)
T d1a06a_         219 EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPW  266 (307)
T ss_dssp             HHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred             HHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHh
Confidence            9888876532   23568999999999999999999999999999865


No 32 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.8e-49  Score=402.74  Aligned_cols=248  Identities=24%  Similarity=0.360  Sum_probs=207.6

Q ss_pred             eeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEec----CC
Q psy5539         367 IIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV----GK  441 (653)
Q Consensus       367 ~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~----~~  441 (653)
                      +++.+.||+|+||+||+|++.     .++..||+|.++.. ......+.|.+|+++|++++|||||++++++..    +.
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~-----~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~   85 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDT-----ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK   85 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred             EEeeeEEecCcCcEEEEEEEC-----CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCC
Confidence            467778999999999999864     35678999998754 344556789999999999999999999999864    45


Q ss_pred             ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCCE
Q psy5539         442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRK--FVHRDLATRNC  519 (653)
Q Consensus       442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~--ivHrDLkp~NI  519 (653)
                      .++|||||+++|+|.++++..                    ..+++..+..++.||++||+|||+++  |+||||||+||
T Consensus        86 ~~~ivmE~~~~g~L~~~l~~~--------------------~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NI  145 (270)
T d1t4ha_          86 CIVLVTELMTSGTLKTYLKRF--------------------KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI  145 (270)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--------------------SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGE
T ss_pred             EEEEEEeCCCCCcHHHHHhcc--------------------ccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhc
Confidence            689999999999999999732                    35889999999999999999999998  99999999999


Q ss_pred             eEc-CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-CHH
Q psy5539         520 LIN-DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGL-THE  597 (653)
Q Consensus       520 Ll~-~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~-~~~  597 (653)
                      ||+ +++.+||+|||+|+.....    ......||+.|||||.+.+ .++.++|||||||++|||++|. .||.+. +..
T Consensus       146 Ll~~~~~~~Kl~DFGla~~~~~~----~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~-~Pf~~~~~~~  219 (270)
T d1t4ha_         146 FITGPTGSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE-YPYSECQNAA  219 (270)
T ss_dssp             EESSTTSCEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSS-CTTTTCSSHH
T ss_pred             eeeCCCCCEEEeecCcceeccCC----ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCC-CCCCCcccHH
Confidence            996 5899999999999754221    1234568999999998764 6999999999999999999965 588664 456


Q ss_pred             HHHHHHHcCCcc-CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         598 EVVKYIKEGNIL-QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       598 e~~~~i~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      ++.+.+..+... ..+...++++.+|+.+||+.||++|||++|+++|.|
T Consensus       220 ~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~  268 (270)
T d1t4ha_         220 QIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAF  268 (270)
T ss_dssp             HHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcc
Confidence            667777665432 344567899999999999999999999999999876


No 33 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.6e-49  Score=413.17  Aligned_cols=254  Identities=22%  Similarity=0.347  Sum_probs=224.0

Q ss_pred             CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC
Q psy5539         363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG  440 (653)
Q Consensus       363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~  440 (653)
                      ..++|++++.||+|+||+||+|+..     .+++.||||+++...  .....+.+.+|+.+|++++|||||++++++.+.
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~~~~~-----~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~   77 (337)
T d1o6la_           3 TMNDFDYLKLLGKGTFGKVILVREK-----ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH   77 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS
T ss_pred             chHhcEEEEEEecCcCeEEEEEEEC-----CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccc
Confidence            4468999999999999999999864     467899999997542  122345688999999999999999999999999


Q ss_pred             CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539         441 KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL  520 (653)
Q Consensus       441 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL  520 (653)
                      +.+++||||+++|+|.++++.                    ...+++..+..++.||+.||+|||+++|+||||||+|||
T Consensus        78 ~~~~iv~ey~~gg~L~~~~~~--------------------~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIL  137 (337)
T d1o6la_          78 DRLCFVMEYANGGELFFHLSR--------------------ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM  137 (337)
T ss_dssp             SEEEEEEECCTTCBHHHHHHH--------------------HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEE
T ss_pred             cccccceeccCCCchhhhhhc--------------------ccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeE
Confidence            999999999999999999873                    245889999999999999999999999999999999999


Q ss_pred             EcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Q psy5539         521 INDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVV  600 (653)
Q Consensus       521 l~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~  600 (653)
                      ++++|.+||+|||+|+......  .......||+.|||||++.+..|+.++|||||||++|||++| .+||.+.+..++.
T Consensus       138 l~~~g~vkl~DFG~a~~~~~~~--~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G-~~pf~~~~~~~~~  214 (337)
T d1o6la_         138 LDKDGHIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG-RLPFYNQDHERLF  214 (337)
T ss_dssp             ECTTSCEEECCCTTCBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHS-SCSSCCSSHHHHH
T ss_pred             ecCCCCEEEeecccccccccCC--cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHC-CCCCCCcCHHHHH
Confidence            9999999999999998653322  223345789999999999999999999999999999999994 5799999999999


Q ss_pred             HHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHHHH
Q psy5539         601 KYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPS-----FRTIYQTLW  645 (653)
Q Consensus       601 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~L~  645 (653)
                      +.+..+. ...|..+++++.+||++||+.||.+||+     +++|++|.|
T Consensus       215 ~~i~~~~-~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~  263 (337)
T d1o6la_         215 ELILMEE-IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF  263 (337)
T ss_dssp             HHHHHCC-CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred             HHHhcCC-CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcc
Confidence            9998876 4678889999999999999999999994     899999875


No 34 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.8e-49  Score=406.04  Aligned_cols=252  Identities=26%  Similarity=0.378  Sum_probs=219.2

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-----HHHHHHHHHHHHHHhhCCCCccceEEeEEec
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-----EYLQTDFEREACLLAEFDHPNIVKLLGVCAV  439 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-----~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~  439 (653)
                      ++|++.+.||+|+||+||+|+..     .+++.||||+++....     ....+.+.+|+.+|++++|||||++++++.+
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~   84 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREK-----STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN   84 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEET-----TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             cCEEEeEEEecCCCeEEEEEEEC-----CCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            56999999999999999999964     3568999999864321     1235679999999999999999999999999


Q ss_pred             CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539         440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC  519 (653)
Q Consensus       440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI  519 (653)
                      .+..+|||||+++|+|.+++...                    ..+++..+..++.||+.||+|||+++|+||||||+||
T Consensus        85 ~~~~~iv~E~~~gg~L~~~i~~~--------------------~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Ni  144 (293)
T d1jksa_          85 KTDVILILELVAGGELFDFLAEK--------------------ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI  144 (293)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--------------------SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred             CCEEEEEEEcCCCccccchhccc--------------------cccchhHHHHHHHHHHHHHHhhhhcceeecccccceE
Confidence            99999999999999999999732                    3589999999999999999999999999999999999


Q ss_pred             eEcCCC----cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539         520 LINDQM----VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT  595 (653)
Q Consensus       520 Ll~~~~----~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~  595 (653)
                      |++.++    .+||+|||+|+......   ......+|+.|||||.+.+..++.++|||||||++|||++| ..||.+.+
T Consensus       145 ll~~~~~~~~~vkl~DfG~a~~~~~~~---~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g-~~Pf~~~~  220 (293)
T d1jksa_         145 MLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-ASPFLGDT  220 (293)
T ss_dssp             EESCSSSSSCCEEECCCTTCEECTTSC---BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSCCSS
T ss_pred             EEecCCCcccceEecchhhhhhcCCCc---cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcC-CCCCCCCC
Confidence            998776    59999999998653322   22345678999999999999999999999999999999995 56999999


Q ss_pred             HHHHHHHHHcCCccCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         596 HEEVVKYIKEGNILQA---PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       596 ~~e~~~~i~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      ..++...+..+.....   +..++.++.+||++||+.||++|||++++++|.|
T Consensus       221 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~  273 (293)
T d1jksa_         221 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW  273 (293)
T ss_dssp             HHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred             HHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence            9999998888764322   3578999999999999999999999999999875


No 35 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=7.9e-49  Score=414.91  Aligned_cols=252  Identities=19%  Similarity=0.323  Sum_probs=219.6

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC  444 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~  444 (653)
                      ++|++.+.||+|+||+||+|+..     .++..||||++.... ....+.+.+|+.+|++++|||||++++++..++..+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~-----~~g~~vAvK~i~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   99 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTER-----ATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV   99 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEET-----TTTEEEEEEEECCCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEEC-----CCCCEEEEEEEcccc-hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            47999999999999999999864     467899999997643 334567999999999999999999999999999999


Q ss_pred             EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc--
Q psy5539         445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN--  522 (653)
Q Consensus       445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~--  522 (653)
                      |||||+++|+|.+++.                   .....+++..+..|+.||+.||+|||+++|+||||||+|||++  
T Consensus       100 ivmE~~~gg~L~~~l~-------------------~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~  160 (350)
T d1koaa2         100 MIYEFMSGGELFEKVA-------------------DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK  160 (350)
T ss_dssp             EEECCCCSCBHHHHHT-------------------CTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST
T ss_pred             EEEEcCCCCCHHHHHH-------------------hhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC
Confidence            9999999999999985                   1234689999999999999999999999999999999999995  


Q ss_pred             CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539         523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY  602 (653)
Q Consensus       523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~  602 (653)
                      .++.+||+|||+|+.+....   ......+|+.|||||++.+..++.++|||||||++|||++ |..||.+.+..+++..
T Consensus       161 ~~~~vkL~DFG~a~~~~~~~---~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~-G~~Pf~~~~~~~~~~~  236 (350)
T d1koaa2         161 RSNELKLIDFGLTAHLDPKQ---SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS-GLSPFGGENDDETLRN  236 (350)
T ss_dssp             TSCCEEECCCTTCEECCTTS---CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHH
T ss_pred             CCCeEEEeecchheeccccc---ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHh-CCCCCCCCCHHHHHHH
Confidence            46899999999998653322   1233567999999999999999999999999999999999 4569999999999999


Q ss_pred             HHcCCccCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         603 IKEGNILQA---PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       603 i~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      +..+.....   ...+++++.+|+.+||+.||++|||++|+++|.|
T Consensus       237 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~  282 (350)
T d1koaa2         237 VKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW  282 (350)
T ss_dssp             HHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTT
T ss_pred             HHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence            888764322   2458899999999999999999999999999875


No 36 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.7e-48  Score=407.00  Aligned_cols=250  Identities=21%  Similarity=0.362  Sum_probs=221.2

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc--HHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS--EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK  441 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~--~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~  441 (653)
                      .++|++++.||+|+||+||+|+..     .+++.||||+++....  ....+.+.+|+.++++++|||||++++++...+
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~-----~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   77 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSR-----HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ   77 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS
T ss_pred             hhHeEEEEEEecCcCcEEEEEEEC-----CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCC
Confidence            368999999999999999999864     4568999999975421  223457899999999999999999999999999


Q ss_pred             ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539         442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI  521 (653)
Q Consensus       442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl  521 (653)
                      ..++||||+++|+|..++..                    ...+++..+..++.||+.||+|||+++|+||||||+||||
T Consensus        78 ~~~ivmE~~~gg~l~~~~~~--------------------~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl  137 (316)
T d1fota_          78 QIFMIMDYIEGGELFSLLRK--------------------SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL  137 (316)
T ss_dssp             EEEEEECCCCSCBHHHHHHH--------------------TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE
T ss_pred             eeeeEeeecCCccccccccc--------------------cccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE
Confidence            99999999999999998862                    3457888999999999999999999999999999999999


Q ss_pred             cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539         522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK  601 (653)
Q Consensus       522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~  601 (653)
                      +.++.+||+|||+|+.....     .....||+.|||||.+.+..++.++|||||||++|||++| ..||.+.+..++..
T Consensus       138 ~~~g~vkL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG-~~Pf~~~~~~~~~~  211 (316)
T d1fota_         138 DKNGHIKITDFGFAKYVPDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG-YTPFYDSNTMKTYE  211 (316)
T ss_dssp             CTTSCEEECCCSSCEECSSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHS-SCTTCCSSHHHHHH
T ss_pred             cCCCCEEEecCccceEeccc-----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhC-CCCCCCcCHHHHHH
Confidence            99999999999999875322     2345789999999999999999999999999999999995 56999999999999


Q ss_pred             HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539         602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW  645 (653)
Q Consensus       602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~  645 (653)
                      .+..+.. ..|..+++++.+++.+||..||.+|+     |+++|++|+|
T Consensus       212 ~i~~~~~-~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~  259 (316)
T d1fota_         212 KILNAEL-RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW  259 (316)
T ss_dssp             HHHHCCC-CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred             HHHcCCC-CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcc
Confidence            9988764 56778999999999999999999996     9999999876


No 37 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=1.6e-48  Score=412.84  Aligned_cols=252  Identities=21%  Similarity=0.334  Sum_probs=219.4

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC  444 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~  444 (653)
                      ++|++++.||+|+||+||+|+..     .++..||||+++.... ...+.+.+|+++|++++|||||++++++..++..+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~-----~~~~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~  102 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEK-----ATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMV  102 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEEC-----CCCCEEEEEEECCcch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            46999999999999999999864     4568999999876433 33567889999999999999999999999999999


Q ss_pred             EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc--
Q psy5539         445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN--  522 (653)
Q Consensus       445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~--  522 (653)
                      |||||+++|+|.+++.                   .....+++.+++.|+.||+.||+|||++||+||||||+||||+  
T Consensus       103 ivmE~~~gg~L~~~~~-------------------~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~  163 (352)
T d1koba_         103 LILEFLSGGELFDRIA-------------------AEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK  163 (352)
T ss_dssp             EEEECCCCCBHHHHTT-------------------CTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST
T ss_pred             EEEEcCCCChHHHHHH-------------------hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccccccccc
Confidence            9999999999998875                   1234689999999999999999999999999999999999998  


Q ss_pred             CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539         523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY  602 (653)
Q Consensus       523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~  602 (653)
                      +++.+||+|||+|+.......   .....+|+.|||||.+.+..++.++|||||||++|||++| ..||.+.+..+++..
T Consensus       164 ~~~~vkL~DFGla~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG-~~Pf~~~~~~~~~~~  239 (352)
T d1koba_         164 KASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG-LSPFAGEDDLETLQN  239 (352)
T ss_dssp             TCCCEEECCCTTCEECCTTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHS-CCSSCCSSHHHHHHH
T ss_pred             CCCeEEEeecccceecCCCCc---eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhC-CCCCCCCCHHHHHHH
Confidence            678999999999987643221   2234678899999999999999999999999999999995 569999999999999


Q ss_pred             HHcCCccC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         603 IKEGNILQ---APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       603 i~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      +..+....   ....+++++.+||.+||+.||.+|||++|+++|.|
T Consensus       240 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~  285 (352)
T d1koba_         240 VKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW  285 (352)
T ss_dssp             HHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTT
T ss_pred             HHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence            88876432   23568999999999999999999999999999865


No 38 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=1.9e-47  Score=391.50  Aligned_cols=252  Identities=23%  Similarity=0.324  Sum_probs=218.0

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--------cHHHHHHHHHHHHHHhhCC-CCccceEEe
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--------SEYLQTDFEREACLLAEFD-HPNIVKLLG  435 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--------~~~~~~~f~~Ei~il~~l~-HpnIv~l~g  435 (653)
                      ++|++.+.||+|+||+||+|+..     .+++.||||+++...        .+...+.+.+|+.++++++ |||||++++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~   77 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHK-----PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD   77 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             ccCEEceEEecCcCeEEEEEEEC-----CCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence            58999999999999999999863     467899999986432        1334557889999999997 999999999


Q ss_pred             EEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539         436 VCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA  515 (653)
Q Consensus       436 ~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk  515 (653)
                      ++.+++..+|||||+++|||.++|+.                    ...+++.++..++.||+.||+|||+++|+|||||
T Consensus        78 ~~~~~~~~~ivmE~~~~g~L~~~l~~--------------------~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlk  137 (277)
T d1phka_          78 TYETNTFFFLVFDLMKKGELFDYLTE--------------------KVTLSEKETRKIMRALLEVICALHKLNIVHRDLK  137 (277)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHH--------------------HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             ecccCcceEEEEEcCCCchHHHHHHh--------------------cCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccc
Confidence            99999999999999999999999972                    2458999999999999999999999999999999


Q ss_pred             CCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc------CCCCCchhHHHHHHHHHHHHhCCCC
Q psy5539         516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY------NKYTVESDVWAFGVCLWEIFSFALQ  589 (653)
Q Consensus       516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~t~ksDVwSlGvvl~ellt~~~~  589 (653)
                      |+|||+++++.+||+|||+++.+....   ......+|..|+|||.+.+      ..++.++||||+|+++|||++| ..
T Consensus       138 p~Nill~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g-~~  213 (277)
T d1phka_         138 PENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG-SP  213 (277)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS-SC
T ss_pred             cceEEEcCCCCeEEccchheeEccCCC---ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccC-CC
Confidence            999999999999999999998653321   2344678999999999864      3568899999999999999994 56


Q ss_pred             CCCCCCHHHHHHHHHcCCccC---CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         590 PYYGLTHEEVVKYIKEGNILQ---APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       590 p~~~~~~~e~~~~i~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      ||.+.+..+..+.+..+....   ....+++++++|+.+||+.+|++|||++||++|.|
T Consensus       214 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~  272 (277)
T d1phka_         214 PFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF  272 (277)
T ss_dssp             SSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred             CCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHH
Confidence            999999999888888776432   22368999999999999999999999999999875


No 39 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.2e-47  Score=405.94  Aligned_cols=249  Identities=24%  Similarity=0.347  Sum_probs=220.5

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCc
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKP  442 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~  442 (653)
                      ++|++++.||+|+||+||+|+..     .+++.||||+++...  .....+.+.+|+++|+.++|||||++++++.....
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~-----~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHK-----ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cCeEEEEEeecCcCcEEEEEEEC-----CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccc
Confidence            57999999999999999999864     456899999986432  11234568899999999999999999999999999


Q ss_pred             eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539         443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN  522 (653)
Q Consensus       443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~  522 (653)
                      .++||||+.+|+|.+++...                    ..+++..+..++.||+.||.|||+++||||||||+||||+
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~--------------------~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~  175 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRI--------------------GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID  175 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHH--------------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred             cccccccccccchhhhHhhc--------------------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccC
Confidence            99999999999999998632                    3589999999999999999999999999999999999999


Q ss_pred             CCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539         523 DQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY  602 (653)
Q Consensus       523 ~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~  602 (653)
                      .++.+||+|||+|+.+...     .....||+.|||||++.+..++.++|||||||++|||++| .+||.+.+..++...
T Consensus       176 ~~g~ikL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG-~~Pf~~~~~~~~~~~  249 (350)
T d1rdqe_         176 QQGYIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEK  249 (350)
T ss_dssp             TTSCEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHH
T ss_pred             CCCCEEeeeceeeeecccc-----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhC-CCCCCCcCHHHHHHH
Confidence            9999999999999875322     2345789999999999999999999999999999999995 569999999999999


Q ss_pred             HHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539         603 IKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW  645 (653)
Q Consensus       603 i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~  645 (653)
                      +..+.. ..+..+++++.+|+++||+.||.+|+     |+++|++|.|
T Consensus       250 i~~~~~-~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~  296 (350)
T d1rdqe_         250 IVSGKV-RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW  296 (350)
T ss_dssp             HHHCCC-CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred             HhcCCC-CCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCcc
Confidence            988764 56778999999999999999999994     9999999876


No 40 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.4e-48  Score=402.75  Aligned_cols=252  Identities=27%  Similarity=0.411  Sum_probs=218.0

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHh-hCCCCccceEEeEEecCC
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLA-EFDHPNIVKLLGVCAVGK  441 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~-~l~HpnIv~l~g~~~~~~  441 (653)
                      ++|++.+.||+|+||+||+|+..     .+++.||||+++...  .....+.+.+|+.++. .++|||||++++++..++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~-----~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFK-----KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET-----TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCeEEeeEEecCCCcEEEEEEEC-----CCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCC
Confidence            57999999999999999999864     467899999997432  1122345666766655 689999999999999999


Q ss_pred             ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539         442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI  521 (653)
Q Consensus       442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl  521 (653)
                      ..+|||||+++|+|.++++..                    ..+++.++..++.||+.||+|||+++|+||||||+|||+
T Consensus        77 ~~yivmEy~~~g~L~~~i~~~--------------------~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~  136 (320)
T d1xjda_          77 NLFFVMEYLNGGDLMYHIQSC--------------------HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL  136 (320)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--------------------SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE
T ss_pred             ceeEEEeecCCCcHHHHhhcc--------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee
Confidence            999999999999999999732                    357889999999999999999999999999999999999


Q ss_pred             cCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539         522 NDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK  601 (653)
Q Consensus       522 ~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~  601 (653)
                      ++++.+||+|||+++......  .......||+.|||||.+.+..++.++|||||||++|||++| ..||.+.+..++..
T Consensus       137 ~~~~~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG-~~PF~~~~~~~~~~  213 (320)
T d1xjda_         137 DKDGHIKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG-QSPFHGQDEEELFH  213 (320)
T ss_dssp             CTTSCEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHH
T ss_pred             cCCCceeccccchhhhccccc--ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhC-CCCCCCCCHHHHHH
Confidence            999999999999998653322  223445789999999999999999999999999999999995 56999999999999


Q ss_pred             HHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHH-HHHHHHH
Q psy5539         602 YIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFR-TIYQTLW  645 (653)
Q Consensus       602 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-eil~~L~  645 (653)
                      .+..+.. ..|..+++++.+|+++||+.||++|||+. ++++|+|
T Consensus       214 ~i~~~~~-~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpf  257 (320)
T d1xjda_         214 SIRMDNP-FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL  257 (320)
T ss_dssp             HHHHCCC-CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGG
T ss_pred             HHHcCCC-CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCch
Confidence            9988764 56778999999999999999999999995 7887764


No 41 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=4.5e-47  Score=389.17  Aligned_cols=259  Identities=19%  Similarity=0.263  Sum_probs=212.7

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc--cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA--SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK  441 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~--~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~  441 (653)
                      .++|++.+.||+|+||+||+|+..     .+++.||||+++...  .....+.|.+|++++++++|||||++++++...+
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~   80 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDL-----RLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET   80 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEC
T ss_pred             cceeEEeEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeecc
Confidence            367999999999999999999864     457899999997542  3445668999999999999999999999987543


Q ss_pred             ----ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539         442 ----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR  517 (653)
Q Consensus       442 ----~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~  517 (653)
                          ..+|||||+++|+|.+++..                    ...+++.+++.++.||+.||+|||+++|+||||||+
T Consensus        81 ~~~~~~~lvmE~~~g~~L~~~~~~--------------------~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~  140 (277)
T d1o6ya_          81 PAGPLPYIVMEYVDGVTLRDIVHT--------------------EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA  140 (277)
T ss_dssp             SSSEEEEEEEECCCEEEHHHHHHH--------------------HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             CCCceEEEEEECCCCCEehhhhcc--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCc
Confidence                37999999999999998862                    245899999999999999999999999999999999


Q ss_pred             CEeEcCCCcEEEeccCcccccccccc-ccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539         518 NCLINDQMVVKIADFGLSRKMYLQDY-YKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTH  596 (653)
Q Consensus       518 NILl~~~~~vkI~DfGla~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~  596 (653)
                      |||++.++..+|+|||.+........ ........||+.|||||.+.+..++.++|||||||++|||++| .+||.+.+.
T Consensus       141 NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG-~~Pf~~~~~  219 (277)
T d1o6ya_         141 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG-EPPFTGDSP  219 (277)
T ss_dssp             GEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS-SCSCCCSSH
T ss_pred             ccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhC-CCCCCCcCH
Confidence            99999999999999999875532221 1223345689999999999999999999999999999999995 569999888


Q ss_pred             HHHHHHHHcCCcc---CCCCCCcHHHHHHHHHhhccCCCCCC-CHHHHHHHHHHHH
Q psy5539         597 EEVVKYIKEGNIL---QAPDNTPDALYDLMKLCWNMKPMNRP-SFRTIYQTLWNIK  648 (653)
Q Consensus       597 ~e~~~~i~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RP-s~~eil~~L~~l~  648 (653)
                      .++...+......   ...+.+++++.+++++||+.||.+|| |++++++.|.+++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         220 VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             HHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            8877666554432   23457899999999999999999999 8999998888764


No 42 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.4e-47  Score=397.16  Aligned_cols=253  Identities=17%  Similarity=0.295  Sum_probs=218.9

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM  443 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~  443 (653)
                      .++|.+.+.||+|+||+||+|+..     .++..||||.++.....  ...+.+|+++|+.++|||||++++++.+++..
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~-----~~~~~~AiK~i~~~~~~--~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~   76 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVET-----SSKKTYMAKFVKVKGTD--QVLVKKEISILNIARHRNILHLHESFESMEEL   76 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECCCTHH--HHHHHHHHHHHHHSCCTTBCCEEEEEEETTEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEEC-----CCCcEEEEEEEcCCccc--HHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence            357999999999999999999864     35689999999765432  44688999999999999999999999999999


Q ss_pred             EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539         444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND  523 (653)
Q Consensus       444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~  523 (653)
                      +|||||+++|+|.++++.                   ....+++.++..++.||+.||+|||+++|+||||||+|||++.
T Consensus        77 ~lvmE~~~gg~L~~~i~~-------------------~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~  137 (321)
T d1tkia_          77 VMIFEFISGLDIFERINT-------------------SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT  137 (321)
T ss_dssp             EEEECCCCCCBHHHHHTS-------------------SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS
T ss_pred             EEEEecCCCCcHHHHHHh-------------------cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC
Confidence            999999999999999961                   2246899999999999999999999999999999999999985


Q ss_pred             C--CcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Q psy5539         524 Q--MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVK  601 (653)
Q Consensus       524 ~--~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~  601 (653)
                      +  ..+||+|||+++.......   .....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+++.
T Consensus       138 ~~~~~ikl~DFG~~~~~~~~~~---~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~-G~~Pf~~~~~~~~~~  213 (321)
T d1tkia_         138 RRSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQQIIE  213 (321)
T ss_dssp             SSCCCEEECCCTTCEECCTTCE---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHH
T ss_pred             CCceEEEEcccchhhccccCCc---ccccccccccccchhccCCCCCchhhcccHHHHHHHHHh-CCCCCCCCCHHHHHH
Confidence            4  5899999999986533221   122456889999999999999999999999999999999 556999999999999


Q ss_pred             HHHcCCccCC---CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539         602 YIKEGNILQA---PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN  646 (653)
Q Consensus       602 ~i~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~  646 (653)
                      .+..+.....   ...+++++.+|+++||..||++|||++|+++|.|-
T Consensus       214 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~  261 (321)
T d1tkia_         214 NIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWL  261 (321)
T ss_dssp             HHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred             HHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhh
Confidence            9988764322   13688999999999999999999999999999874


No 43 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1e-46  Score=400.88  Aligned_cols=253  Identities=21%  Similarity=0.276  Sum_probs=207.8

Q ss_pred             CCCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-----HHHHHHHHHHHHHHhhCCCCccceEEeEE
Q psy5539         363 PRNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-----EYLQTDFEREACLLAEFDHPNIVKLLGVC  437 (653)
Q Consensus       363 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-----~~~~~~f~~Ei~il~~l~HpnIv~l~g~~  437 (653)
                      +.++|++.+.||+|+||+||+|+..     .+++.||||++.....     ........+|+.+++.++|||||++++++
T Consensus         2 slddy~i~~~lG~G~fg~Vy~~~~~-----~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~   76 (364)
T d1omwa3           2 TMNDFSVHRIIGRGGFGEVYGCRKA-----DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF   76 (364)
T ss_dssp             CSTTEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE
T ss_pred             CHHhCeeeeEEecCCCeEEEEEEEC-----CCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEE
Confidence            3578999999999999999999864     4568999999864321     11122234457788888999999999999


Q ss_pred             ecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539         438 AVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR  517 (653)
Q Consensus       438 ~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~  517 (653)
                      ...+..+|||||+++|+|.++|...                    ..+++..+..++.||+.||+|||+++|+||||||+
T Consensus        77 ~~~~~~~ivmE~~~gg~L~~~l~~~--------------------~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~  136 (364)
T d1omwa3          77 HTPDKLSFILDLMNGGDLHYHLSQH--------------------GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPA  136 (364)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHH--------------------CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             EECCEEEEEEEecCCCcHHHHHHhc--------------------ccccHHHHHHHHHHHHHHHHHHHHCCccceeeccc
Confidence            9999999999999999999999732                    45788999999999999999999999999999999


Q ss_pred             CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539         518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTH  596 (653)
Q Consensus       518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~  596 (653)
                      |||+++++.+||+|||+|+.....    ......||+.|||||.+.. ..++.++|||||||++|||++| ..||.+.+.
T Consensus       137 NILl~~~g~iKl~DFGla~~~~~~----~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG-~~Pf~~~~~  211 (364)
T d1omwa3         137 NILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG-HSPFRQHKT  211 (364)
T ss_dssp             GEEECSSSCEEECCCTTCEECSSS----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHS-SCSSCSSCS
T ss_pred             eeEEcCCCcEEEeeeceeeecCCC----cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhC-CCCCCCCCH
Confidence            999999999999999999865322    2234578999999999975 4689999999999999999995 568876544


Q ss_pred             HHHHHHHH--cCCccCCCCCCcHHHHHHHHHhhccCCCCCCC-----HHHHHHHHH
Q psy5539         597 EEVVKYIK--EGNILQAPDNTPDALYDLMKLCWNMKPMNRPS-----FRTIYQTLW  645 (653)
Q Consensus       597 ~e~~~~i~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~eil~~L~  645 (653)
                      .+......  .......++.+++++.+||.+||+.||++|||     +++|++|.|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~  267 (364)
T d1omwa3         212 KDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF  267 (364)
T ss_dssp             SCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGG
T ss_pred             HHHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCcc
Confidence            33222222  22234556789999999999999999999999     799999876


No 44 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-46  Score=388.21  Aligned_cols=249  Identities=24%  Similarity=0.334  Sum_probs=202.7

Q ss_pred             EEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccH----HHHHHHHHHHHHHhhCCCCccceEEeEEecCCceE
Q psy5539         369 YVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASE----YLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPMC  444 (653)
Q Consensus       369 ~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~----~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~~  444 (653)
                      .++.||+|+||+||+|++.     .+++.||||+++.....    ...+.+.+|+.++++++|||||++++++..++..+
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~   76 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDK-----NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   76 (299)
T ss_dssp             EEEEEEEETTEEEEEEECS-----SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             cceEeccCcCeEEEEEEEC-----CCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCcee
Confidence            4578999999999999863     45789999999654322    22346889999999999999999999999999999


Q ss_pred             EEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcCC
Q psy5539         445 LLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLINDQ  524 (653)
Q Consensus       445 LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~~  524 (653)
                      |||||+.++++..++.                    ....+++..+..++.||+.||+|||+++|+||||||+|||++++
T Consensus        77 ivmE~~~~~~~~~~~~--------------------~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~  136 (299)
T d1ua2a_          77 LVFDFMETDLEVIIKD--------------------NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN  136 (299)
T ss_dssp             EEEECCSEEHHHHHTT--------------------CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             ehhhhhcchHHhhhhh--------------------cccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCC
Confidence            9999999877665543                    23468889999999999999999999999999999999999999


Q ss_pred             CcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Q psy5539         525 MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKYI  603 (653)
Q Consensus       525 ~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~i  603 (653)
                      +.+||+|||+|+......  .......+|+.|||||.+... .++.++|||||||++|||++| .+||.+.+..+.+..+
T Consensus       137 ~~~KL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g-~~pf~~~~~~~~l~~i  213 (299)
T d1ua2a_         137 GVLKLADFGLAKSFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLR-VPFLPGDSDLDQLTRI  213 (299)
T ss_dssp             CCEEECCCGGGSTTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHS-SCSSCCSSHHHHHHHH
T ss_pred             CccccccCccccccCCCc--ccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhC-cCCCCCCCHHHHHHHH
Confidence            999999999997653322  222345688999999998755 579999999999999999995 5799998888877766


Q ss_pred             HcCCcc-------------------C--------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         604 KEGNIL-------------------Q--------APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       604 ~~~~~~-------------------~--------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      ......                   .        .....++++.+|+.+||+.||++|||++|+++|.|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~  282 (299)
T d1ua2a_         214 FETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY  282 (299)
T ss_dssp             HHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred             HHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHh
Confidence            431000                   0        01245789999999999999999999999999876


No 45 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-45  Score=381.40  Aligned_cols=254  Identities=24%  Similarity=0.395  Sum_probs=206.9

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM  443 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~  443 (653)
                      ++|++++.||+|+||+||+|+..     .+++.||||+++.... +...+.+.+|++++++++|||||++++++..++..
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~   76 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNK-----LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL   76 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             CCCEeccEEecCcCeEEEEEEEC-----CCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccce
Confidence            58999999999999999999864     4568899999975432 23356789999999999999999999999999999


Q ss_pred             EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539         444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND  523 (653)
Q Consensus       444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~  523 (653)
                      ++||||+.+ ++.+++..                  .....+++..+..++.||+.||+|||+++||||||||+|||++.
T Consensus        77 ~iv~e~~~~-~~~~~~~~------------------~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~  137 (298)
T d1gz8a_          77 YLVFEFLHQ-DLKKFMDA------------------SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT  137 (298)
T ss_dssp             EEEEECCSE-EHHHHHHH------------------TTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             eEEEeecCC-chhhhhhh------------------hcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecc
Confidence            999999975 55555541                  23356899999999999999999999999999999999999999


Q ss_pred             CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539         524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY  602 (653)
Q Consensus       524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~  602 (653)
                      ++.+||+|||+|+......  .......+|+.|+|||.+.... ++.++|||||||++|||++| ..||.+.+..+.+..
T Consensus       138 ~~~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G-~~Pf~~~~~~~~~~~  214 (298)
T d1gz8a_         138 EGAIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR-RALFPGDSEIDQLFR  214 (298)
T ss_dssp             TSCEEECSTTHHHHHCCCS--BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHH
T ss_pred             cCcceeccCCcceeccCCc--ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhC-CCCCCCCCHHHHHHH
Confidence            9999999999998653322  2334557899999999887765 58999999999999999995 569988887776655


Q ss_pred             HHcC--Ccc---------------C-----------CCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         603 IKEG--NIL---------------Q-----------APDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       603 i~~~--~~~---------------~-----------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      +...  ...               .           .....+.++.+|+++||..||++|||++|+++|.|
T Consensus       215 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~f  285 (298)
T d1gz8a_         215 IFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF  285 (298)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             HHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHh
Confidence            4321  000               0           01245688999999999999999999999999866


No 46 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.4e-46  Score=391.01  Aligned_cols=249  Identities=21%  Similarity=0.347  Sum_probs=201.2

Q ss_pred             CCeeEEe-eecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhC-CCCccceEEeEEec---
Q psy5539         365 NDIIYVR-DLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEF-DHPNIVKLLGVCAV---  439 (653)
Q Consensus       365 ~~~~~~~-~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l-~HpnIv~l~g~~~~---  439 (653)
                      ++|.++. .||+|+||+||+|+..     .+++.||||+++..      ..+.+|++++.++ +|||||++++++..   
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~   79 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNK-----RTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYA   79 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEET-----TTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred             cCEEEeeEEeeeccCeEEEEEEEC-----CCCCEEEEEEECCc------HHHHHHHHHHHHhcCCCCCCeEEEEEeeccc
Confidence            5788875 5999999999999864     35688999999642      2467899887654 89999999999864   


Q ss_pred             -CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCC
Q psy5539         440 -GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRN  518 (653)
Q Consensus       440 -~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~N  518 (653)
                       +...+|||||+++|||.++|+..                  ....+++.++..|+.||+.||+|||+++|+||||||+|
T Consensus        80 ~~~~~~ivmEy~~gg~L~~~i~~~------------------~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~N  141 (335)
T d2ozaa1          80 GRKCLLIVMECLDGGELFSRIQDR------------------GDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN  141 (335)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHSC------------------SCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred             CCCEEEEEEECCCCCcHHHHHHhc------------------CCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccc
Confidence             46789999999999999999721                  22468999999999999999999999999999999999


Q ss_pred             EeEcC---CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539         519 CLIND---QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT  595 (653)
Q Consensus       519 ILl~~---~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~  595 (653)
                      ||+++   ++.+||+|||+|+......   ......||+.|||||.+.+..|+.++|||||||++|||++| .+||.+.+
T Consensus       142 Ill~~~~~~~~~Kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg-~~Pf~~~~  217 (335)
T d2ozaa1         142 LLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG-YPPFYSNH  217 (335)
T ss_dssp             EEESCSSTTCCEEECCCTTCEECCCCC---CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTS-SCSCEETT
T ss_pred             cccccccccccccccccceeeeccCCC---ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhC-CCCCCCCC
Confidence            99985   5679999999998654332   23456789999999999999999999999999999999995 56887766


Q ss_pred             HHHHHHHHHc----CCccCCC----CCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHH
Q psy5539         596 HEEVVKYIKE----GNILQAP----DNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNI  647 (653)
Q Consensus       596 ~~e~~~~i~~----~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l  647 (653)
                      ..+....+..    +.. ..+    ..+++++.+|+++||+.||++|||+.++++|.|-.
T Consensus       218 ~~~~~~~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~  276 (335)
T d2ozaa1         218 GLAISPGMKTRIRMGQY-EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  276 (335)
T ss_dssp             CC--------CCCSCSS-SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHH
T ss_pred             HHHHHHHHHHHHhcCCC-CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhh
Confidence            5444433322    221 222    24788999999999999999999999999998754


No 47 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-45  Score=382.23  Aligned_cols=255  Identities=24%  Similarity=0.331  Sum_probs=200.0

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC---
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK---  441 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~---  441 (653)
                      .+|.+.+.||+|+||.||+|++.       +..||||+++.....  ...++.|+..+..++|||||++++++...+   
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~-------g~~vAvK~~~~~~~~--~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~   73 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR-------GEEVAVKIFSSREER--SWFREAEIYQTVMLRHENILGFIAADNKDNGTW   73 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-------TEEEEEEEECGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSS
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-------CEEEEEEEECccchh--HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcc
Confidence            46788999999999999999863       478999999754322  223445666677889999999999997543   


Q ss_pred             -ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh--------CCceec
Q psy5539         442 -PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD--------RKFVHR  512 (653)
Q Consensus       442 -~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~--------~~ivHr  512 (653)
                       .++|||||+++|+|.++|+.                     ..+++..+++++.|+|.||+|||+        ++|+||
T Consensus        74 ~~~~lv~Ey~~~g~L~~~l~~---------------------~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHr  132 (303)
T d1vjya_          74 TQLWLVSDYHEHGSLFDYLNR---------------------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR  132 (303)
T ss_dssp             EEEEEEEECCTTCBHHHHHHH---------------------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECS
T ss_pred             eEEEEEEecccCCCHHHHHhc---------------------CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeecc
Confidence             57999999999999999972                     247899999999999999999996        599999


Q ss_pred             CCCCCCEeEcCCCcEEEeccCcccccccccccc--CCCCCCCccccccchhhccCC------CCCchhHHHHHHHHHHHH
Q psy5539         513 DLATRNCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYNK------YTVESDVWAFGVCLWEIF  584 (653)
Q Consensus       513 DLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~------~t~ksDVwSlGvvl~ell  584 (653)
                      ||||+||||++++.+||+|||+++.........  ......+|+.|||||.+.+..      ++.++||||||++||||+
T Consensus       133 DlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~  212 (303)
T d1vjya_         133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA  212 (303)
T ss_dssp             CCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHh
Confidence            999999999999999999999998765433221  233567899999999987653      577999999999999999


Q ss_pred             hCCCCCCC----------C-----CCHHHHHHHHHcCCc-cCCCCC-----CcHHHHHHHHHhhccCCCCCCCHHHHHHH
Q psy5539         585 SFALQPYY----------G-----LTHEEVVKYIKEGNI-LQAPDN-----TPDALYDLMKLCWNMKPMNRPSFRTIYQT  643 (653)
Q Consensus       585 t~~~~p~~----------~-----~~~~e~~~~i~~~~~-~~~~~~-----~~~~l~~li~~cl~~dP~~RPs~~eil~~  643 (653)
                      ||.. |+.          .     ...+++.+.+..+.. +..+..     .+..+.+|+.+||+.||++|||+.||+++
T Consensus       213 tg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         213 RRCS-IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HTBC-BTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             hCCC-CCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            9653 321          1     233445554444333 222222     23568999999999999999999999999


Q ss_pred             HHHHHHH
Q psy5539         644 LWNIKRD  650 (653)
Q Consensus       644 L~~l~~~  650 (653)
                      |..+.++
T Consensus       292 L~~i~~~  298 (303)
T d1vjya_         292 LSQLSQQ  298 (303)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9988765


No 48 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.5e-45  Score=381.19  Aligned_cols=254  Identities=25%  Similarity=0.417  Sum_probs=206.2

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-HHHHHHHHHHHHHHhhC---CCCccceEEeEEec-
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-EYLQTDFEREACLLAEF---DHPNIVKLLGVCAV-  439 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-~~~~~~f~~Ei~il~~l---~HpnIv~l~g~~~~-  439 (653)
                      ++|++++.||+|+||+||+|++..    ..++.||||+++.... +.....+.+|+.+++.|   +||||+++++++.. 
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~----~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~   82 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLK----NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS   82 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT----TTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred             CCEEEEEEEecccCeEEEEEEEEC----CCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccc
Confidence            589999999999999999998632    2357899999865422 11223456777776665   89999999999853 


Q ss_pred             ----CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539         440 ----GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA  515 (653)
Q Consensus       440 ----~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk  515 (653)
                          ....+++|||++++++.....                   .....+++..+..++.||+.||+|||+++|+|||||
T Consensus        83 ~~~~~~~~~~~~e~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiK  143 (305)
T d1blxa_          83 RTDRETKLTLVFEHVDQDLTTYLDK-------------------VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK  143 (305)
T ss_dssp             ECSSEEEEEEEEECCSCBHHHHHHH-------------------SCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred             ccccCceEEEEEEeccCCchhhhhh-------------------ccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCC
Confidence                347899999999877665443                   233568899999999999999999999999999999


Q ss_pred             CCCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539         516 TRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT  595 (653)
Q Consensus       516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~  595 (653)
                      |+|||+++++.+||+|||+++......   ......||+.|||||.+.+..++.++|||||||++|||++| .+||.+.+
T Consensus       144 p~NILi~~~~~~kl~dfg~~~~~~~~~---~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g-~~pf~~~~  219 (305)
T d1blxa_         144 PQNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR-KPLFRGSS  219 (305)
T ss_dssp             GGGEEECTTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-SCSCCCSS
T ss_pred             ccEEEEcCCCCeeecchhhhhhhcccc---cCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHC-CCCCCCCC
Confidence            999999999999999999987643222   23456789999999999999999999999999999999995 57999988


Q ss_pred             HHHHHHHHHcC--------------------------CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         596 HEEVVKYIKEG--------------------------NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       596 ~~e~~~~i~~~--------------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      ..+.+..+...                          .....+...++.+.+|+++||+.||++|||++|+++|+|
T Consensus       220 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpf  295 (305)
T d1blxa_         220 DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY  295 (305)
T ss_dssp             HHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             HHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChh
Confidence            88777665431                          001123457889999999999999999999999999976


No 49 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=5.9e-45  Score=375.00  Aligned_cols=252  Identities=23%  Similarity=0.352  Sum_probs=206.3

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM  443 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~  443 (653)
                      ++|++++.||+|+||+||+|+++      +++.||||+++... .+...+.+.+|+.+|++++|||||++++++...+..
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~------~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~   75 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN------YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL   75 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET------TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCE
T ss_pred             CCceeccEEecCCCcEEEEEEeC------CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCce
Confidence            58999999999999999999863      45789999996542 233356789999999999999999999999999999


Q ss_pred             EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539         444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND  523 (653)
Q Consensus       444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~  523 (653)
                      ++++||+.++.+..+.+                    ....+++..+..++.||+.||+|||+++|+||||||+|||++.
T Consensus        76 ~i~~e~~~~~~~~~~~~--------------------~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~  135 (286)
T d1ob3a_          76 VLVFEHLDQDLKKLLDV--------------------CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR  135 (286)
T ss_dssp             EEEEECCSEEHHHHHHT--------------------STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred             eEEEEeehhhhHHHHHh--------------------hcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcC
Confidence            99999998876666553                    3356999999999999999999999999999999999999999


Q ss_pred             CCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539         524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY  602 (653)
Q Consensus       524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~  602 (653)
                      ++.+||+|||++.......  .......+++.|+|||.+... .++.++||||||+++|||++| ..||.+.+..+....
T Consensus       136 ~~~~kl~DfG~a~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G-~~pf~~~~~~~~~~~  212 (286)
T d1ob3a_         136 EGELKIADFGLARAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLMR  212 (286)
T ss_dssp             TSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHS-SCSCCCSSHHHHHHH
T ss_pred             CCCEEecccccceecccCc--cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHC-CCCCCCCCHHHHHHH
Confidence            9999999999998653322  122344578899999998765 568999999999999999995 569998887776655


Q ss_pred             HHcC--Cc--------------------------cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         603 IKEG--NI--------------------------LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       603 i~~~--~~--------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      +...  ..                          .......++++.+|+++||+.||++|||++|+++|+|
T Consensus       213 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~  283 (286)
T d1ob3a_         213 IFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY  283 (286)
T ss_dssp             HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             HHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence            4320  00                          0113456789999999999999999999999998876


No 50 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-45  Score=376.94  Aligned_cols=244  Identities=22%  Similarity=0.318  Sum_probs=202.8

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-----HHHHHHHHHHHHHHhhCC--CCccceEEeEE
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-----EYLQTDFEREACLLAEFD--HPNIVKLLGVC  437 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-----~~~~~~f~~Ei~il~~l~--HpnIv~l~g~~  437 (653)
                      ++|++.+.||+|+||+||+|+..     .+++.||||+++....     ......+.+|+.++++++  |||||++++++
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~   78 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRV-----SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF   78 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEE
Confidence            57999999999999999999864     3568999999864321     111234678999999997  89999999999


Q ss_pred             ecCCceEEEEeecCC-CChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539         438 AVGKPMCLLFEYMGR-GDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT  516 (653)
Q Consensus       438 ~~~~~~~LV~Ey~~~-gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp  516 (653)
                      ...+..++||||+.+ +++.++++.                    ...+++.++..++.||+.||+|||+++|+||||||
T Consensus        79 ~~~~~~~lv~e~~~~~~~l~~~~~~--------------------~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp  138 (273)
T d1xwsa_          79 ERPDSFVLILERPEPVQDLFDFITE--------------------RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKD  138 (273)
T ss_dssp             ECSSEEEEEEECCSSEEEHHHHHHH--------------------HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSG
T ss_pred             eeCCeEEEEEEeccCcchHHHHHhc--------------------cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcc
Confidence            999999999999976 688888762                    24589999999999999999999999999999999


Q ss_pred             CCEeEcC-CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCC
Q psy5539         517 RNCLIND-QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKY-TVESDVWAFGVCLWEIFSFALQPYYGL  594 (653)
Q Consensus       517 ~NILl~~-~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-t~ksDVwSlGvvl~ellt~~~~p~~~~  594 (653)
                      +|||++. ++.+||+|||+|+.....    ......||+.|||||.+.+..+ +.++|||||||++|||++|. .||.+.
T Consensus       139 ~NIll~~~~~~vkl~DFG~a~~~~~~----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~-~Pf~~~  213 (273)
T d1xwsa_         139 ENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD-IPFEHD  213 (273)
T ss_dssp             GGEEEETTTTEEEECCCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS-CSCCSH
T ss_pred             cceEEecCCCeEEECccccceecccc----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCC-CCCCCc
Confidence            9999985 579999999999764222    2234578999999999988776 57789999999999999965 588652


Q ss_pred             CHHHHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         595 THEEVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       595 ~~~e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                        .    .+..+. ...+..+++++.+|+++||+.||++|||++|+++|+|
T Consensus       214 --~----~i~~~~-~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~  257 (273)
T d1xwsa_         214 --E----EIIRGQ-VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPW  257 (273)
T ss_dssp             --H----HHHHCC-CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             --h----HHhhcc-cCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHh
Confidence              2    233343 3466789999999999999999999999999999876


No 51 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.3e-44  Score=367.40  Aligned_cols=254  Identities=25%  Similarity=0.384  Sum_probs=213.6

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecCCce
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGKPM  443 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~~~  443 (653)
                      ++|++++.||+|+||+||+|++.     .+++.||||+++... .+.....+.+|+.+++.++||||+++++++......
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~   76 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNR-----ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEEC-----CCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccce
Confidence            57999999999999999999964     456889999986442 334567899999999999999999999999999999


Q ss_pred             EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEcC
Q psy5539         444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIND  523 (653)
Q Consensus       444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~~  523 (653)
                      ++|+|++.+++|..+++                    ....+++..+..++.|++.||+|||+++|+||||||+|||++.
T Consensus        77 ~iv~~~~~~~~l~~~~~--------------------~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~  136 (292)
T d1unla_          77 TLVFEFCDQDLKKYFDS--------------------CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR  136 (292)
T ss_dssp             EEEEECCSEEHHHHHHH--------------------TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             eEEeeeccccccccccc--------------------cccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccccc
Confidence            99999999999888775                    2346789999999999999999999999999999999999999


Q ss_pred             CCcEEEeccCccccccccccccCCCCCCCccccccchhhccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Q psy5539         524 QMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNK-YTVESDVWAFGVCLWEIFSFALQPYYGLTHEEVVKY  602 (653)
Q Consensus       524 ~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e~~~~  602 (653)
                      ++.+||+|||.++......  .......++..|+|||.+.... ++.++|||||||++|||++|+.+++.+.+..+.+..
T Consensus       137 ~~~~kl~DFG~a~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~  214 (292)
T d1unla_         137 NGELKLANFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR  214 (292)
T ss_dssp             TCCEEECCCTTCEECCSCC--SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHH
T ss_pred             CCceeeeecchhhcccCCC--ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHH
Confidence            9999999999998654322  2233445678899999988765 699999999999999999988877888777776666


Q ss_pred             HHcC----------------------------CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         603 IKEG----------------------------NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       603 i~~~----------------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      +...                            .........++.+.+|+++||+.||.+|||++|+++|.|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~  285 (292)
T d1unla_         215 IFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY  285 (292)
T ss_dssp             HHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred             HHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChh
Confidence            5321                            001122345788999999999999999999999999876


No 52 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-43  Score=373.20  Aligned_cols=249  Identities=24%  Similarity=0.337  Sum_probs=201.1

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC-
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK-  441 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~-  441 (653)
                      .++|++++.||+|+||+||+|++.     .+++.||||+++.. ..+...+.+.+|+++|++++|||||++++++...+ 
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~   91 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDG-----RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET   91 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEET-----TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSS
T ss_pred             CCcEEEEEEEecCCCeEEEEEEEC-----CCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcc
Confidence            468999999999999999999864     45789999999754 34455678899999999999999999999997654 


Q ss_pred             -----ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy5539         442 -----PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLAT  516 (653)
Q Consensus       442 -----~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp  516 (653)
                           .++|||||+ +++|..+++                     ...+++..+..++.||+.||+|||+++|+||||||
T Consensus        92 ~~~~~~~~lv~e~~-~~~l~~~~~---------------------~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp  149 (346)
T d1cm8a_          92 LDDFTDFYLVMPFM-GTDLGKLMK---------------------HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKP  149 (346)
T ss_dssp             TTTCCCCEEEEECC-SEEHHHHHH---------------------HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             ccccceEEEEEecc-cccHHHHHH---------------------hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCc
Confidence                 579999999 557777664                     13589999999999999999999999999999999


Q ss_pred             CCEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539         517 RNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLT  595 (653)
Q Consensus       517 ~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~  595 (653)
                      +|||++.++.+||+|||+|+....     ......+|+.|+|||.+.+. .++.++|||||||++|||++| .+||.+.+
T Consensus       150 ~NIL~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g-~~pf~~~~  223 (346)
T d1cm8a_         150 GNLAVNEDCELKILDFGLARQADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG-KTLFKGSD  223 (346)
T ss_dssp             GGEEECTTCCEEECCCTTCEECCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHS-SCSSCCSS
T ss_pred             chhhcccccccccccccceeccCC-----ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHC-cCCCCCCC
Confidence            999999999999999999986532     23456788999999998865 568999999999999999995 56998877


Q ss_pred             HHHHHHHHHcC------------------------------CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         596 HEEVVKYIKEG------------------------------NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       596 ~~e~~~~i~~~------------------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      ..+....+...                              .........++++.+|+.+||..||++|||++|+++|+|
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~  303 (346)
T d1cm8a_         224 HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY  303 (346)
T ss_dssp             HHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             hHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChh
Confidence            66554333220                              011223457889999999999999999999999999876


No 53 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-43  Score=373.44  Aligned_cols=254  Identities=22%  Similarity=0.258  Sum_probs=203.5

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecCC---
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVGK---  441 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~~---  441 (653)
                      ++|++++.||+|+||+||+|+..     .+++.||||+++........+.+.+|+++|++++||||+++++++....   
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~   82 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDN-----VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ   82 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEET-----TTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT
T ss_pred             CCeEEEEEEeeccCeEEEEEEEC-----CCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccc
Confidence            36999999999999999999863     4568899999986655666778999999999999999999999986543   


Q ss_pred             -ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEe
Q psy5539         442 -PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCL  520 (653)
Q Consensus       442 -~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NIL  520 (653)
                       ..++++||+.+|+|.+++..                     ..+++..+..++.||+.||+|||+++||||||||+|||
T Consensus        83 ~~~~~l~~~~~~g~L~~~l~~---------------------~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NIL  141 (345)
T d1pmea_          83 MKDVYLVTHLMGADLYKLLKT---------------------QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLL  141 (345)
T ss_dssp             CCCEEEEEECCCEEHHHHHHH---------------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred             cceEEEEEeecCCchhhhhhc---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEE
Confidence             33555667789999999961                     24899999999999999999999999999999999999


Q ss_pred             EcCCCcEEEeccCccccccccccc-cCCCCCCCccccccchhhc-cCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHHH
Q psy5539         521 INDQMVVKIADFGLSRKMYLQDYY-KGDENDAIPVRWMPLESIL-YNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHEE  598 (653)
Q Consensus       521 l~~~~~vkI~DfGla~~~~~~~~~-~~~~~~~~t~~y~aPE~~~-~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~e  598 (653)
                      |++++.+||+|||+++........ .......+|+.|+|||.+. ...++.++||||+|+++|||++| ..||.+.+..+
T Consensus       142 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g-~~pf~~~~~~~  220 (345)
T d1pmea_         142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPIFPGKHYLD  220 (345)
T ss_dssp             ECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHS-SCSCCCSSHHH
T ss_pred             ECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhC-CCCCCCCCHHH
Confidence            999999999999999865433222 2234456889999999985 45678999999999999999996 56898777655


Q ss_pred             HHHHHHcC-------------------------Cc-----cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         599 VVKYIKEG-------------------------NI-----LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       599 ~~~~i~~~-------------------------~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      ........                         ..     .......+.++.+|+.+||+.||.+|||++++++|.|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf  297 (345)
T d1pmea_         221 QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY  297 (345)
T ss_dssp             HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             HHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence            44333210                         00     0012356788999999999999999999999999875


No 54 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-43  Score=370.22  Aligned_cols=255  Identities=23%  Similarity=0.353  Sum_probs=202.3

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEec----
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV----  439 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~----  439 (653)
                      ++|++++.||+|+||+||+|++.     .+++.||||+++.. ..+...+++.+|+.+|++++||||+++++++..    
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~   84 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHR-----KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP   84 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET-----TTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred             CCEEEEEEEecCcCeEEEEEEEC-----CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccc
Confidence            58999999999999999999864     46789999998643 223344568899999999999999999999854    


Q ss_pred             ----CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy5539         440 ----GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLA  515 (653)
Q Consensus       440 ----~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLk  515 (653)
                          ....++||||+.++++..+..                    ....++...+..++.||+.||.|||+++|+|||||
T Consensus        85 ~~~~~~~~~iv~e~~~~~~~~~~~~--------------------~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlK  144 (318)
T d3blha1          85 YNRCKGSIYLVFDFCEHDLAGLLSN--------------------VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK  144 (318)
T ss_dssp             ------CEEEEEECCCEEHHHHHTC--------------------TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred             ccccCceEEEEEeccCCCccchhhh--------------------cccccccHHHHHHHHHHHHHHHHhccCCEEecCcC
Confidence                346899999998876654432                    23568889999999999999999999999999999


Q ss_pred             CCCEeEcCCCcEEEeccCcccccccccccc--CCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCC
Q psy5539         516 TRNCLINDQMVVKIADFGLSRKMYLQDYYK--GDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYY  592 (653)
Q Consensus       516 p~NILl~~~~~vkI~DfGla~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~  592 (653)
                      |+|||+++++.+||+|||+++.........  ......+|+.|+|||.+.+. .++.++|||||||++|||++| .+||.
T Consensus       145 p~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g-~~pf~  223 (318)
T d3blha1         145 AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR-SPIMQ  223 (318)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS-SCSCC
T ss_pred             chheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhC-CCCCC
Confidence            999999999999999999997654332221  22334689999999998765 689999999999999999995 57999


Q ss_pred             CCCHHHHHHHHHcCCccCCCC-------------------------------CCcHHHHHHHHHhhccCCCCCCCHHHHH
Q psy5539         593 GLTHEEVVKYIKEGNILQAPD-------------------------------NTPDALYDLMKLCWNMKPMNRPSFRTIY  641 (653)
Q Consensus       593 ~~~~~e~~~~i~~~~~~~~~~-------------------------------~~~~~l~~li~~cl~~dP~~RPs~~eil  641 (653)
                      +.+..+....+........+.                               ..++++.+||.+||+.||++|||++|++
T Consensus       224 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL  303 (318)
T d3blha1         224 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL  303 (318)
T ss_dssp             CSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred             CCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHH
Confidence            888877666654311100000                               1246778999999999999999999999


Q ss_pred             HHHH
Q psy5539         642 QTLW  645 (653)
Q Consensus       642 ~~L~  645 (653)
                      +|.|
T Consensus       304 ~Hpf  307 (318)
T d3blha1         304 NHDF  307 (318)
T ss_dssp             HSGG
T ss_pred             cChh
Confidence            9987


No 55 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.8e-44  Score=374.16  Aligned_cols=257  Identities=20%  Similarity=0.304  Sum_probs=210.6

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc---cHHHHHHHHHHHHHHhhCCC-CccceEEeEEec
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA---SEYLQTDFEREACLLAEFDH-PNIVKLLGVCAV  439 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~---~~~~~~~f~~Ei~il~~l~H-pnIv~l~g~~~~  439 (653)
                      .++|++++.||+|+||+||+|+...  ...+++.||||.++...   .....+.+.+|++++++++| |||+++++++..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~--~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~  100 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKIS--GHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT  100 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECS--STTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred             hhceEEEEEEecCCCeEEEEEEECc--cCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc
Confidence            3679999999999999999998632  34567899999986432   12234568899999999977 899999999999


Q ss_pred             CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539         440 GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC  519 (653)
Q Consensus       440 ~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI  519 (653)
                      ....+++|||+.+|+|.+++...                    ..+++..+..++.||+.||+|||+++|+||||||+||
T Consensus       101 ~~~~~~v~e~~~~~~L~~~i~~~--------------------~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Ni  160 (322)
T d1vzoa_         101 ETKLHLILDYINGGELFTHLSQR--------------------ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENI  160 (322)
T ss_dssp             TTEEEEEECCCCSCBHHHHHHHH--------------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred             CCceeeeeecccccHHHHHHHhc--------------------ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccce
Confidence            99999999999999999999732                    3467888999999999999999999999999999999


Q ss_pred             eEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC--CCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539         520 LINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN--KYTVESDVWAFGVCLWEIFSFALQPYYGLTHE  597 (653)
Q Consensus       520 Ll~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~  597 (653)
                      |++.++.+||+|||+++.+...... ......+++.|+|||.+.+.  .++.++|||||||+||||++|. .||.+.+..
T Consensus       161 ll~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~-~PF~~~~~~  238 (322)
T d1vzoa_         161 LLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA-SPFTVDGEK  238 (322)
T ss_dssp             EECTTSCEEESCSSEEEECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSS-CTTSCTTSC
T ss_pred             eecCCCCEEEeeccchhhhcccccc-cccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCC-CCCCCCCHH
Confidence            9999999999999999866433322 22345678899999999765  4688999999999999999955 588765433


Q ss_pred             ----HHHHHHHcCCccCCCCCCcHHHHHHHHHhhccCCCCCC-----CHHHHHHHHH
Q psy5539         598 ----EVVKYIKEGNILQAPDNTPDALYDLMKLCWNMKPMNRP-----SFRTIYQTLW  645 (653)
Q Consensus       598 ----e~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~eil~~L~  645 (653)
                          .+....... ....+..+++++.+|+.+||+.||.+||     |++|+++|+|
T Consensus       239 ~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpf  294 (322)
T d1vzoa_         239 NSQAEISRRILKS-EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF  294 (322)
T ss_dssp             CCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred             HHHHHHHHhcccC-CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHh
Confidence                333333333 3456678999999999999999999999     5899999876


No 56 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=1.6e-42  Score=358.97  Aligned_cols=256  Identities=19%  Similarity=0.270  Sum_probs=200.4

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEE-eEEecCCce
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLL-GVCAVGKPM  443 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~-g~~~~~~~~  443 (653)
                      ++|++.+.||+|+||+||+|++.     .+++.||||+++....   ..++.+|+++++.++|+|++..+ ++...++..
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~---~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~   78 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDI-----AAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN   78 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEET-----TTTEEEEEEEEESCTT---SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEEC-----CCCCEEEEEEEchhcc---CHHHHHHHHHHHHccCCCcccEEEEEEecCCEE
Confidence            46999999999999999999864     3568999999875432   23578999999999887766554 555778889


Q ss_pred             EEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc-
Q psy5539         444 CLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN-  522 (653)
Q Consensus       444 ~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~-  522 (653)
                      ++||||+ +|+|.+.+..                   ....+++..++.++.|++.||+|||+++|+||||||+|||++ 
T Consensus        79 ~ivme~~-~~~l~~~~~~-------------------~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~  138 (299)
T d1ckia_          79 VMVMELL-GPSLEDLFNF-------------------CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL  138 (299)
T ss_dssp             EEEEECC-CCBHHHHHHH-------------------TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECC
T ss_pred             EEEEEEc-CCchhhhhhh-------------------ccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccc
Confidence            9999998 4577776652                   235689999999999999999999999999999999999975 


Q ss_pred             --CCCcEEEeccCccccccccccc-----cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCC
Q psy5539         523 --DQMVVKIADFGLSRKMYLQDYY-----KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLT  595 (653)
Q Consensus       523 --~~~~vkI~DfGla~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~  595 (653)
                        .+..+||+|||+|+........     .......||+.|||||.+.+..++.++||||||+++|||++|. .||.+..
T Consensus       139 ~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~-~P~~~~~  217 (299)
T d1ckia_         139 GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS-LPWQGLK  217 (299)
T ss_dssp             GGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSS-CTTCCCC
T ss_pred             cCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCC-Ccccccc
Confidence              4567999999999876433221     1233457899999999999999999999999999999999965 5887665


Q ss_pred             HHHHHHHH---H----cCCccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHH
Q psy5539         596 HEEVVKYI---K----EGNILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKR  649 (653)
Q Consensus       596 ~~e~~~~i---~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~  649 (653)
                      ..+....+   .    ..........+|+++.++|..||+.+|++||++++|.+.|+.+..
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         218 AATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             -------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            44332221   1    111222346789999999999999999999999999888776643


No 57 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.4e-43  Score=370.75  Aligned_cols=249  Identities=22%  Similarity=0.273  Sum_probs=199.0

Q ss_pred             CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccceEEeEEecC-----
Q psy5539         366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG-----  440 (653)
Q Consensus       366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~-----  440 (653)
                      +|..++.||+|+||+||+|++.     .+++.||||+++....     .+.+|+++|++++|||||++++++...     
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~-----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~   90 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLC-----DSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD   90 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET-----TTCCEEEEEEEECCSS-----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCS
T ss_pred             CcEeeeEEeeCcCeEEEEEEEC-----CCCCEEEEEEECccch-----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCC
Confidence            6788999999999999999964     3568999999975432     235799999999999999999998532     


Q ss_pred             -CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCE
Q psy5539         441 -KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNC  519 (653)
Q Consensus       441 -~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NI  519 (653)
                       ..++|||||++++. .+.+...                ......+++.++..++.||+.||+|||++||+||||||+||
T Consensus        91 ~~~~~lv~Ey~~~~~-~~~l~~~----------------~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NI  153 (350)
T d1q5ka_          91 EVYLNLVLDYVPETV-YRVARHY----------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNL  153 (350)
T ss_dssp             CCEEEEEEECCSEEH-HHHHHHH----------------HHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGE
T ss_pred             ceEEEEEEeccCCcc-HHHHHhh----------------hhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceE
Confidence             34789999998754 4443311                12345689999999999999999999999999999999999


Q ss_pred             eEcCCC-cEEEeccCccccccccccccCCCCCCCccccccchhhcc-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539         520 LINDQM-VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILY-NKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE  597 (653)
Q Consensus       520 Ll~~~~-~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~  597 (653)
                      |++.++ .+||+|||+++......   ......++..|+|||.+.+ ..++.++|||||||++|||++| .+||.+.+..
T Consensus       154 Ll~~~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g-~~pf~~~~~~  229 (350)
T d1q5ka_         154 LLDPDTAVLKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGV  229 (350)
T ss_dssp             EECTTTCCEEECCCTTCEECCTTS---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHT-SCSSCCSSHH
T ss_pred             EEecCCCceeEecccchhhccCCc---ccccccccccccChHHhhcccCCCcceeecccceEEEehhhC-CCCCCCCCHH
Confidence            999765 89999999998653332   2234567889999998875 4689999999999999999995 5799888776


Q ss_pred             HHHHHHHc--C-----------------Ccc---------CCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         598 EVVKYIKE--G-----------------NIL---------QAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       598 e~~~~i~~--~-----------------~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      +.+..+..  +                 ...         ......++++.+|+.+||..||++|||++|+++|.|
T Consensus       230 ~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~  305 (350)
T d1q5ka_         230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF  305 (350)
T ss_dssp             HHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence            65555432  0                 000         012346789999999999999999999999999876


No 58 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=2.2e-42  Score=362.69  Aligned_cols=245  Identities=21%  Similarity=0.336  Sum_probs=197.2

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeEEec--CC
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGVCAV--GK  441 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~--~~  441 (653)
                      ++|++++.||+|+||+||+|+..     .+++.||||+++...    .+++.+|+++|+.++ ||||+++++++..  ..
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~-----~~~~~vAiK~i~~~~----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~  105 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINI-----TNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSR  105 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECSSC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTC
T ss_pred             cCeEEEEEEecCcCeEEEEEEEC-----CCCCEEEEEEECHHH----HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCC
Confidence            57999999999999999999864     467899999997643    346789999999995 9999999999874  45


Q ss_pred             ceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeE
Q psy5539         442 PMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLI  521 (653)
Q Consensus       442 ~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl  521 (653)
                      ..++||||+++|+|..+.                       ..+++.++..++.||+.||+|||+++|+||||||+|||+
T Consensus       106 ~~~~v~e~~~~~~L~~~~-----------------------~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi  162 (328)
T d3bqca1         106 TPALVFEHVNNTDFKQLY-----------------------QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI  162 (328)
T ss_dssp             SEEEEEECCCSCBGGGTT-----------------------TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred             ceeEEEeecCCCcHHHHh-----------------------cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEE
Confidence            689999999999987643                       348899999999999999999999999999999999999


Q ss_pred             cCC-CcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCC-CCCHHH
Q psy5539         522 NDQ-MVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYY-GLTHEE  598 (653)
Q Consensus       522 ~~~-~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~-~~~~~e  598 (653)
                      +.+ +.+||+|||+|+......   ......+|..|+|||.+.+. .++.++||||+|+++|||++|.. ||. +.+..+
T Consensus       163 ~~~~~~vkl~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~-pf~~~~~~~~  238 (328)
T d3bqca1         163 DHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE-PFFHGHDNYD  238 (328)
T ss_dssp             ETTTTEEEECCGGGCEECCTTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCS-SSSCCSSHHH
T ss_pred             cCCCCeeeecccccceeccCCC---cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCC-CCCCCchhHH
Confidence            865 569999999998653322   23445678999999998876 47999999999999999999765 554 333332


Q ss_pred             HHHHHH-------------cCCc-----------------------cCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHH
Q psy5539         599 VVKYIK-------------EGNI-----------------------LQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQ  642 (653)
Q Consensus       599 ~~~~i~-------------~~~~-----------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~  642 (653)
                      ....+.             ....                       ......+++++.+||++||..||++|||++|+++
T Consensus       239 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         239 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            222111             0000                       0011236788999999999999999999999999


Q ss_pred             HHH
Q psy5539         643 TLW  645 (653)
Q Consensus       643 ~L~  645 (653)
                      |+|
T Consensus       319 Hp~  321 (328)
T d3bqca1         319 HPY  321 (328)
T ss_dssp             SGG
T ss_pred             Ccc
Confidence            876


No 59 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=5.6e-42  Score=353.91  Aligned_cols=259  Identities=18%  Similarity=0.246  Sum_probs=210.1

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCC-CccceEEeEEecCCc
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH-PNIVKLLGVCAVGKP  442 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~H-pnIv~l~g~~~~~~~  442 (653)
                      .++|++.+.||+|+||+||+|++.     .+++.||||+++....   ...+.+|++.++.++| +|++.+++++..+..
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~-----~~~~~vAvK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~   75 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNL-----LNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH   75 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEET-----TTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE
T ss_pred             CCceEEEEEEecCCCeEEEEEEEC-----CCCCEEEEEEEccccC---cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCc
Confidence            468999999999999999999964     3568999999865432   2346788999999976 899999999999999


Q ss_pred             eEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCCCEeEc
Q psy5539         443 MCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATRNCLIN  522 (653)
Q Consensus       443 ~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~NILl~  522 (653)
                      .++||||+ +|+|.++++.                   ....++..++..++.|++.||+|||+++|+||||||+|||++
T Consensus        76 ~~~vme~~-~~~l~~~~~~-------------------~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~  135 (293)
T d1csna_          76 NVLVIDLL-GPSLEDLLDL-------------------CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIG  135 (293)
T ss_dssp             EEEEEECC-CCBHHHHHHH-------------------TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC
T ss_pred             cEEEEEec-CCCHHHHHHh-------------------hccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeec
Confidence            99999998 6899998863                   224588999999999999999999999999999999999997


Q ss_pred             C-----CCcEEEeccCccccccccccc-----cCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q psy5539         523 D-----QMVVKIADFGLSRKMYLQDYY-----KGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYY  592 (653)
Q Consensus       523 ~-----~~~vkI~DfGla~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~  592 (653)
                      .     ++.+||+|||+|+........     .......||+.|||||.+.+..++.++||||||+++|||++|. .||.
T Consensus       136 ~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~-~Pf~  214 (293)
T d1csna_         136 RPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGS-LPWQ  214 (293)
T ss_dssp             CSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS-CTTS
T ss_pred             CcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCC-CcCC
Confidence            4     578999999999875432211     1223456899999999999999999999999999999999955 5886


Q ss_pred             CCC---HHHHHHHHHcC----CccCCCCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHHHh
Q psy5539         593 GLT---HEEVVKYIKEG----NILQAPDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWNIKRDL  651 (653)
Q Consensus       593 ~~~---~~e~~~~i~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~l~~~l  651 (653)
                      +..   ..+....+...    ........+|+++.+++..|+..+|++||+++.+.+.+.++.++.
T Consensus       215 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         215 GLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             SCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             CccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence            543   33333333322    122234578899999999999999999999999999888876553


No 60 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.1e-42  Score=364.40  Aligned_cols=251  Identities=23%  Similarity=0.269  Sum_probs=203.8

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc-cHHHHHHHHHHHHHHhhCCCCccceEEeEEecC--
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA-SEYLQTDFEREACLLAEFDHPNIVKLLGVCAVG--  440 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~-~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~~--  440 (653)
                      .++|++++.||+|+||+||+|+..     .+++.||||+++... .....+.+.+|+++|++++|||||++++++...  
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~   91 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDT-----KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS   91 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEET-----TTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEEC-----CCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccc
Confidence            367999999999999999999863     467899999997542 334456789999999999999999999998643  


Q ss_pred             ---CceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539         441 ---KPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR  517 (653)
Q Consensus       441 ---~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~  517 (653)
                         ...++|+||+.+|+|.++++                     ...+++.++..++.||+.||+|||+++|+||||||+
T Consensus        92 ~~~~~~~~i~~~~~gg~L~~~~~---------------------~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~  150 (348)
T d2gfsa1          92 LEEFNDVYLVTHLMGADLNNIVK---------------------CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPS  150 (348)
T ss_dssp             TTTCCCCEEEEECCSEEHHHHHT---------------------TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGG
T ss_pred             cccCceEEEEEeecCCchhhhcc---------------------cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCc
Confidence               34567778889999999985                     135899999999999999999999999999999999


Q ss_pred             CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccC-CCCCchhHHHHHHHHHHHHhCCCCCCCCCCH
Q psy5539         518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYN-KYTVESDVWAFGVCLWEIFSFALQPYYGLTH  596 (653)
Q Consensus       518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~  596 (653)
                      |||++.++.+|++|||++....     .......++..|+|||.+.+. .++.++||||||+++|+|++| .+||.+.+.
T Consensus       151 NILi~~~~~~kl~dfg~a~~~~-----~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g-~~pF~~~~~  224 (348)
T d2gfsa1         151 NLAVNEDCELKILDFGLARHTD-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG-RTLFPGTDH  224 (348)
T ss_dssp             GEEECTTCCEEECCC----CCT-----GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHS-SCSCCCSSH
T ss_pred             cccccccccccccccchhcccC-----cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhC-CCCCCCCCH
Confidence            9999999999999999997542     222445688899999987765 468999999999999999995 569988887


Q ss_pred             HHHHHHHHcCCcc----------------------CC--------CCCCcHHHHHHHHHhhccCCCCCCCHHHHHHHHHH
Q psy5539         597 EEVVKYIKEGNIL----------------------QA--------PDNTPDALYDLMKLCWNMKPMNRPSFRTIYQTLWN  646 (653)
Q Consensus       597 ~e~~~~i~~~~~~----------------------~~--------~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~L~~  646 (653)
                      ......+......                      ..        ....++++.+||++||..||++|||++|+++|.|-
T Consensus       225 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f  304 (348)
T d2gfsa1         225 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF  304 (348)
T ss_dssp             HHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhh
Confidence            7666555331100                      00        13467889999999999999999999999998763


No 61 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.5e-42  Score=363.65  Aligned_cols=250  Identities=23%  Similarity=0.265  Sum_probs=194.6

Q ss_pred             CCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccc-ccHHHHHHHHHHHHHHhhCCCCccceEEeEEec----
Q psy5539         365 NDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDE-ASEYLQTDFEREACLLAEFDHPNIVKLLGVCAV----  439 (653)
Q Consensus       365 ~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~-~~~~~~~~f~~Ei~il~~l~HpnIv~l~g~~~~----  439 (653)
                      ++|++++.||+|+||+||+|++.     .++..||||+++.. ......+.+.+|+.++++++|||||++++++..    
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~-----~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~   91 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDA-----VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL   91 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEET-----TTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST
T ss_pred             CCeEEEEEeecCcCeEEEEEEEC-----CCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccc
Confidence            57999999999999999999864     46789999999754 334455678999999999999999999999864    


Q ss_pred             --CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy5539         440 --GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFVHRDLATR  517 (653)
Q Consensus       440 --~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ivHrDLkp~  517 (653)
                        ....++||||+.++ |.+.+.                      ..+++..+..++.||+.||+|||++||+||||||+
T Consensus        92 ~~~~~~~iv~Ey~~~~-l~~~~~----------------------~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~  148 (355)
T d2b1pa1          92 EEFQDVYLVMELMDAN-LCQVIQ----------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS  148 (355)
T ss_dssp             TTCCEEEEEEECCSEE-HHHHHT----------------------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             ccCceeEEEEeccchH-HHHhhh----------------------cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcc
Confidence              36789999999765 444443                      34789999999999999999999999999999999


Q ss_pred             CEeEcCCCcEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHHHhCCCCCCCCCCHH
Q psy5539         518 NCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEIFSFALQPYYGLTHE  597 (653)
Q Consensus       518 NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~ellt~~~~p~~~~~~~  597 (653)
                      |||++.++.+|++|||+++.....   .......+|..|+|||.+.+..++.++||||+||+++||++| .+||.+.+..
T Consensus       149 Nil~~~~~~~kl~df~~~~~~~~~---~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g-~~pF~~~~~~  224 (355)
T d2b1pa1         149 NIVVKSDCTLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRH-KILFPGRDYI  224 (355)
T ss_dssp             GEEECTTCCEEECCCCC------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS-SCSSCCSSHH
T ss_pred             ccccccccceeeechhhhhccccc---cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhC-CCCCCCCCHH
Confidence            999999999999999998754322   223445678899999999999999999999999999999996 5699887766


Q ss_pred             HHHHHHHc----------------------CCccCC-------------C------CCCcHHHHHHHHHhhccCCCCCCC
Q psy5539         598 EVVKYIKE----------------------GNILQA-------------P------DNTPDALYDLMKLCWNMKPMNRPS  636 (653)
Q Consensus       598 e~~~~i~~----------------------~~~~~~-------------~------~~~~~~l~~li~~cl~~dP~~RPs  636 (653)
                      .....+..                      ......             +      ...++++.+|+++||..||++|||
T Consensus       225 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t  304 (355)
T d2b1pa1         225 DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS  304 (355)
T ss_dssp             HHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcC
Confidence            55444321                      100000             0      013467899999999999999999


Q ss_pred             HHHHHHHHHH
Q psy5539         637 FRTIYQTLWN  646 (653)
Q Consensus       637 ~~eil~~L~~  646 (653)
                      ++|+++|+|-
T Consensus       305 a~elL~Hpw~  314 (355)
T d2b1pa1         305 VDDALQHPYI  314 (355)
T ss_dssp             HHHHHTSTTT
T ss_pred             HHHHhcCccc
Confidence            9999999763


No 62 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=3.4e-36  Score=319.26  Aligned_cols=252  Identities=19%  Similarity=0.260  Sum_probs=188.9

Q ss_pred             CCCeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-----------CCccce
Q psy5539         364 RNDIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-----------HPNIVK  432 (653)
Q Consensus       364 ~~~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-----------HpnIv~  432 (653)
                      .++|++++.||+|+||+||+|+..     .+++.||||+++...  ...+.+.+|+.+++.++           |+||++
T Consensus        12 ~~rY~i~~~LG~G~fg~Vy~~~~~-----~~g~~vAvKvi~~~~--~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~   84 (362)
T d1q8ya_          12 DARYILVRKLGWGHFSTVWLAKDM-----VNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILK   84 (362)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET-----TTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCC
T ss_pred             CCcEEEEEEEeeCCCeEEEEEEEC-----CCCCEEEEEEEeccc--cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEE
Confidence            346999999999999999999863     467899999998543  23456788999988875           578999


Q ss_pred             EEeEEec--CCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhh-CCc
Q psy5539         433 LLGVCAV--GKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSD-RKF  509 (653)
Q Consensus       433 l~g~~~~--~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~-~~i  509 (653)
                      +++++..  .....+++++...+........                 ......+++..+..++.||+.||+|||+ .||
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~i~~i~~qil~al~~lh~~~~I  147 (362)
T d1q8ya_          85 LLDHFNHKGPNGVHVVMVFEVLGENLLALIK-----------------KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGI  147 (362)
T ss_dssp             CCEEEEEEETTEEEEEEEECCCCEEHHHHHH-----------------HTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred             EEEEeeeccccceeeeeeecccccccccccc-----------------cccccCCcHHHHHHHHHHHHHHHHHHhhhcCc
Confidence            9988764  3456677777655544333321                 1234568899999999999999999998 899


Q ss_pred             eecCCCCCCEeEcCCC------cEEEeccCccccccccccccCCCCCCCccccccchhhccCCCCCchhHHHHHHHHHHH
Q psy5539         510 VHRDLATRNCLINDQM------VVKIADFGLSRKMYLQDYYKGDENDAIPVRWMPLESILYNKYTVESDVWAFGVCLWEI  583 (653)
Q Consensus       510 vHrDLkp~NILl~~~~------~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~t~ksDVwSlGvvl~el  583 (653)
                      +||||||+||||+.++      .++++|||.+....     .......+|+.|+|||.+....++.++||||+|++++||
T Consensus       148 vHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  222 (362)
T d1q8ya_         148 IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD-----EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL  222 (362)
T ss_dssp             ECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETT-----BCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHH
T ss_pred             ccccCChhHeeeeccCcccccceeeEeecccccccc-----cccccccccccccChhhccccCCCccccccchHHHHHHH
Confidence            9999999999998665      49999999997542     223456789999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCHH------HH-HHHHH-----------cCC----------c-------------------cCCCCCCc
Q psy5539         584 FSFALQPYYGLTHE------EV-VKYIK-----------EGN----------I-------------------LQAPDNTP  616 (653)
Q Consensus       584 lt~~~~p~~~~~~~------e~-~~~i~-----------~~~----------~-------------------~~~~~~~~  616 (653)
                      ++|. .||......      +. ...+.           .+.          .                   .......+
T Consensus       223 ~~g~-~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (362)
T d1q8ya_         223 ITGD-FLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA  301 (362)
T ss_dssp             HHSS-CCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHH
T ss_pred             HHCC-CCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccC
Confidence            9955 477643221      11 11100           000          0                   00111235


Q ss_pred             HHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q psy5539         617 DALYDLMKLCWNMKPMNRPSFRTIYQTLW  645 (653)
Q Consensus       617 ~~l~~li~~cl~~dP~~RPs~~eil~~L~  645 (653)
                      +++.+|+.+|+..||.+|||++|+++|.|
T Consensus       302 ~~~~dll~~mL~~dP~~Rpta~e~L~Hp~  330 (362)
T d1q8ya_         302 KEISDFLSPMLQLDPRKRADAGGLVNHPW  330 (362)
T ss_dssp             HHHHHHHGGGGCSSTTTCBCHHHHHTCGG
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence            67899999999999999999999999876


No 63 
>d1nl1a1 g.14.1.1 (A:66-147) Prothrombin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.96  E-value=8.3e-30  Score=208.18  Aligned_cols=81  Identities=38%  Similarity=0.922  Sum_probs=78.5

Q ss_pred             cccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccCCCC
Q psy5539         187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPTCA  266 (653)
Q Consensus       187 C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip~C~  266 (653)
                      ||.|+|.+|||++++|.+|++||.|+++.+|.+.+.+..+|...+.||||||||++..+|||||+++.++||||+||.|+
T Consensus         1 Cy~g~G~~YrG~~s~T~sG~~C~~W~s~~~~~~~~~~~~~~~~~l~~NyCRNP~~~~~~PWCyv~~~~~~~eyC~ip~C~   80 (82)
T d1nl1a1           1 CAEGVGMNYRGNVSVTRSGIECQLWRSRYPHKPEINSTTHPGADLRENFCRNPDGSITGPWCYTTSPTLRREECSVPVCG   80 (82)
T ss_dssp             SBCTTSTTCCCCCCBBTTSCBBCCTTCCSSSCCSSCTTTSTTSCCCTTCCBCTTCCTTCSEEEBSSTTCCEEEBCCCBTT
T ss_pred             CccCCCCCCccCCeECCCCCcccCCccCCCcccceecccccCcCcccccccCCCCCCCCCCeEeCCCCCceeeCCCCcCC
Confidence            89999999999999999999999999999999999999999999999999999999889999999999999999999998


Q ss_pred             C
Q psy5539         267 D  267 (653)
Q Consensus       267 ~  267 (653)
                      +
T Consensus        81 ~   81 (82)
T d1nl1a1          81 Q   81 (82)
T ss_dssp             C
T ss_pred             C
Confidence            6


No 64 
>d2qj2a2 g.14.1.1 (A:127-209) NK1 fragment of hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=6.9e-30  Score=209.37  Aligned_cols=82  Identities=46%  Similarity=1.067  Sum_probs=79.0

Q ss_pred             ccccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccCCC
Q psy5539         186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPTC  265 (653)
Q Consensus       186 ~C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip~C  265 (653)
                      |||.|+|.+|||++++|.+|++||+|+++.++.|.+.+..++...+.||||||||++..+|||||.++..+||||+||+|
T Consensus         1 dCy~g~G~~YrG~~s~T~sG~~C~~W~s~~~~~~~~~~~~~~~~~l~hNyCRNP~~~~~~PWCy~~~~~~~~eyC~ip~C   80 (83)
T d2qj2a2           1 NCIIGKGRSYKGTVSITKSGIKCQPWSSMIPHEHSFLPSSYRGKDLQENYCRNPRGEEGGPWCFTSNPEVRYEVCDIPQC   80 (83)
T ss_dssp             CSBSSSCTTCCCCCCBBTTCCBBCCTTCCSSCCCCCCGGGGTTSCCCTTCCBCSSCCTTCSEEEBSSTTCCEEEBCCCBT
T ss_pred             CCccCCCCCceecceECCCCCcccCCccCCCccccEeeccCcccccccccccCCCCCCCCcceEeCCCCcceEecCCCcC
Confidence            79999999999999999999999999999999999999999999999999999999988999999999999999999999


Q ss_pred             CC
Q psy5539         266 AD  267 (653)
Q Consensus       266 ~~  267 (653)
                      ++
T Consensus        81 ~~   82 (83)
T d2qj2a2          81 SE   82 (83)
T ss_dssp             TC
T ss_pred             CC
Confidence            86


No 65 
>d1ki0a1 g.14.1.1 (A:81-163) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=1.5e-29  Score=207.28  Aligned_cols=82  Identities=39%  Similarity=0.960  Sum_probs=78.5

Q ss_pred             cccccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccCC
Q psy5539         185 YDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPT  264 (653)
Q Consensus       185 ~~C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip~  264 (653)
                      +|||.|+|..|||++++|.||++||+|+++.++.+.+.+..+|...++||||||||++..+|||||+++..+||||+||.
T Consensus         2 ~dCy~g~G~~YrG~~s~T~sG~~C~~W~~~~~~~~~~~~~~~~~~~l~hNyCRNP~~~~~~PWCy~~~~~~~~e~C~ip~   81 (83)
T d1ki0a1           2 SECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQGPWCYTTDPEKRYDYCDILE   81 (83)
T ss_dssp             CSSBCTTCTTCCCCCCBCTTSCBBCCTTCCSSSCCSCCTTTCTTSCCCTTCCBCTTCCTTCCEEEBSCTTCSEEECCCCB
T ss_pred             CCCcCCCCCCCeecceeCCCCCccCCCccCCCcccceecccCcccCcccccccCCCCCCCCCceEecCCCcceEcCCCCc
Confidence            47999999999999999999999999999999999999999999999999999999998799999999999999999999


Q ss_pred             CC
Q psy5539         265 CA  266 (653)
Q Consensus       265 C~  266 (653)
                      |.
T Consensus        82 C~   83 (83)
T d1ki0a1          82 CE   83 (83)
T ss_dssp             CB
T ss_pred             CC
Confidence            94


No 66 
>d1ki0a2 g.14.1.1 (A:164-250) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95  E-value=2e-29  Score=207.93  Aligned_cols=82  Identities=46%  Similarity=1.085  Sum_probs=78.5

Q ss_pred             cccccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccCC
Q psy5539         185 YDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPT  264 (653)
Q Consensus       185 ~~C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip~  264 (653)
                      ++||.|+|..|||++++|.+|++||.|+++.+|.|.+.+..++...+.||||||||++. +|||||+++..+||||+||.
T Consensus         1 eeCy~g~G~~YrG~~s~T~sG~~C~~W~s~~~~~~~~~~~~~~~~~l~hNyCRNP~~~~-~PWCy~~~~~~~weyC~ip~   79 (87)
T d1ki0a2           1 EECMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNPDREL-RPWCFTTDPNKRWELCDIPR   79 (87)
T ss_dssp             CSSBCTTSTTBCCCCCBCTTCCBBCCTTCCSSSCCSCCTTTSTTSCCCTTCCBCSSSCS-SCEEEBSCTTCSEEECCCCB
T ss_pred             CcCCccCCCCCcccceecCCCCccccCcccCCcccccccccccccCCCcccccCCCCCc-ccceEeccCCcceEeCCCCc
Confidence            37999999999999999999999999999999999999999999999999999999986 99999999999999999999


Q ss_pred             CCC
Q psy5539         265 CAD  267 (653)
Q Consensus       265 C~~  267 (653)
                      |+.
T Consensus        80 C~~   82 (87)
T d1ki0a2          80 CTT   82 (87)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            985


No 67 
>d1ki0a3 g.14.1.1 (A:251-333) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95  E-value=1.7e-29  Score=206.61  Aligned_cols=81  Identities=52%  Similarity=1.183  Sum_probs=77.8

Q ss_pred             ccccccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccC
Q psy5539         184 TYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIP  263 (653)
Q Consensus       184 ~~~C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip  263 (653)
                      +.+||.|+|.+|||++++|.+|++||+|+++.++.|.+.+..++...+.||||||||++. +|||||.++.++||||+||
T Consensus         3 ~~dCy~g~G~~YrG~~~~T~sG~~C~~W~s~~~~~~~~~~~~~~~~~l~hNyCRNP~~~~-~PWCy~~~~~~~weyC~Ip   81 (83)
T d1ki0a3           3 TYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHERTPENFPCKNLDENYCRNPDGKR-APWCHTTNSQVRWEYCKIP   81 (83)
T ss_dssp             CBSSBCTTSTTBCCCCCBCTTCCBBCCTTCCSSCCCSCCTTTCGGGCCCTTCCBCCSSCS-SCEEEBSSTTCSEEECCCC
T ss_pred             cccCCcCCCCCCccccEecCCCCccCCCcCCCCcccccccccCcccccccccccCCCCCC-CcceEeCCCCcceEeCCCC
Confidence            568999999999999999999999999999999999999999999999999999999996 9999999999999999999


Q ss_pred             CC
Q psy5539         264 TC  265 (653)
Q Consensus       264 ~C  265 (653)
                      +|
T Consensus        82 ~C   83 (83)
T d1ki0a3          82 SC   83 (83)
T ss_dssp             BC
T ss_pred             cC
Confidence            98


No 68 
>d1i71a_ g.14.1.1 (A:) Apolipoprotein A {Human (Homo sapiens), IV-7 variant [TaxId: 9606]}
Probab=99.95  E-value=3.5e-29  Score=204.94  Aligned_cols=81  Identities=46%  Similarity=1.056  Sum_probs=77.7

Q ss_pred             ccccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccCCC
Q psy5539         186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPTC  265 (653)
Q Consensus       186 ~C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip~C  265 (653)
                      +||.|+|.+|||++++|.+|++||.|+++.++.+.+.+..++...+.||||||||++. +|||||+++..+||||+||+|
T Consensus         1 dCy~g~G~~YrG~~s~T~sG~~C~~W~s~~~~~~~~~~~~~~~~~l~hNyCRNP~~~~-~PWCyv~~~~~~~eyC~I~~C   79 (83)
T d1i71a_           1 DCYHGDGQSYRGSFSTTVTGRTCQSWSSMTPHWHQRTTEYYPNGGLTRNYCRNPDAEI-RPWCYTMDPSVRWEYCNLTQC   79 (83)
T ss_dssp             CEECTTSTTCCCCCCBBTTSCBBCCTTCCSSCCCCCSTTTCTTTTCCTTCCBCSSSCS-SCEEEBSSTTCCEEEBSCEEC
T ss_pred             CCcccCCCCCccccEeCCCCCcccCCccCCCcccccccccccCCCcccccccCCCCCC-CceEEecCCCcceEeCCCCcC
Confidence            6999999999999999999999999999999999999999999999999999999986 999999999999999999999


Q ss_pred             CC
Q psy5539         266 AD  267 (653)
Q Consensus       266 ~~  267 (653)
                      +-
T Consensus        80 ~~   81 (83)
T d1i71a_          80 PV   81 (83)
T ss_dssp             CC
T ss_pred             CC
Confidence            74


No 69 
>d5hpga_ g.14.1.1 (A:) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95  E-value=5.9e-29  Score=204.26  Aligned_cols=82  Identities=44%  Similarity=0.980  Sum_probs=76.1

Q ss_pred             ccccCCccccceeeeccCCCCcccccCCCCCCCCC-CCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccCC
Q psy5539         186 DCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHE-RPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPT  264 (653)
Q Consensus       186 ~C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~-~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip~  264 (653)
                      |||.|+|..|||++++|.+|++||+|+++.+|.|. +.+..++...+.||||||||++..+|||||.++...||||+||.
T Consensus         1 dCy~g~G~~YrG~~s~T~sG~~C~~W~s~~~~~~~~~~~~~~~~~~l~~NyCRNP~~~~~~PWCy~~~~~~~~eyC~ip~   80 (84)
T d5hpga_           1 DCMFGNGKGYRGKRVTTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVGGPWCYTTNPRKLYDYCDVPQ   80 (84)
T ss_dssp             CCBSTTCTTCCCCCCBCTTSCBBCCTTCCSSSCCSSSCTTTSTTSCCCTTCCBCTTCCTTCCEEEBSCTTCCEEECCCCB
T ss_pred             CCcccCCCCCccccEecCCCCccCCccccCCccccccccccCcccCCccccccCCCCCcCCCCeEeCCCCcceeeCCCCc
Confidence            69999999999999999999999999999998886 46678888889999999999998899999999999999999999


Q ss_pred             CCC
Q psy5539         265 CAD  267 (653)
Q Consensus       265 C~~  267 (653)
                      |+.
T Consensus        81 C~~   83 (84)
T d5hpga_          81 CAA   83 (84)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            974


No 70 
>d2hpqp_ g.14.1.1 (P:) Meizothrombin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95  E-value=1.2e-29  Score=205.39  Aligned_cols=79  Identities=30%  Similarity=0.744  Sum_probs=76.0

Q ss_pred             cccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccCCC
Q psy5539         187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIPTC  265 (653)
Q Consensus       187 C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip~C  265 (653)
                      ||.|+|.+|||++++|.+|++||+|+++.++.+.+.+..++..++.||||||||++..+|||||.++..+||||+||.|
T Consensus         1 Cy~g~G~~YrG~~s~T~sG~~C~~W~~~~~~~~~~~~~~~~~~~l~~NyCRNP~~~~~~PWCyt~~~~~~~eyC~Ip~C   79 (79)
T d2hpqp_           1 CVPDRGQQYQGRLAVTTHGLPCLAWASAQAKALSKHQDFNSAVQLVENFCRNPDGDEEGVWCYVAGKPGDFGYCDLNYC   79 (79)
T ss_dssp             CBCGGGTTCCCCCCBBTTSCBCCCTTCSSHHHHGGGSCCCTTSCCCTTCCBCSSCCSSCCBCBCSSSTTCBCCBCCCBC
T ss_pred             CcCCCCCCCccCceECCCCCccCCCCCCCCcccccccccCcccccccccccCCCCCCCCcceEeCCCCcceEeCCCCcC
Confidence            8999999999999999999999999999999988889999999999999999999988999999999999999999998


No 71 
>d1a0ha1 g.14.1.1 (A:164-270) Meizothrombin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.94  E-value=1.2e-28  Score=211.84  Aligned_cols=87  Identities=29%  Similarity=0.736  Sum_probs=81.4

Q ss_pred             ccccccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCeEEEeCCCcceeecccC
Q psy5539         184 TYDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPELNNSENYCRNAGGEEPSPWCYTMDPNVRWQRCEIP  263 (653)
Q Consensus       184 ~~~C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~~~~~~~nyCRNp~~~~~~pWC~~~~~~~~~~~C~ip  263 (653)
                      ..+||.|+|..|||++++|.+|++||.|+++.+|.|.+.+..+|...+.||||||||++..+|||||.++..+||||+||
T Consensus         4 ~e~Cy~~~G~~YrG~~s~T~sG~~C~~W~s~~~~~~~~~~~~~~~~~l~hNyCRNPdg~~~~PWCYv~~~~~~~eyC~ip   83 (109)
T d1a0ha1           4 LETCVPDRGREYRGRLAVTTHGSRCLAWSSEQAKALSKDQDFNPAVPLAENFCRNPDGDEEGAWCYVADQPGDFEYCDLN   83 (109)
T ss_dssp             SCCCBCGGGTTCCCCCCCCTTSCCCCCSSSTTHHHHSTTSCCCCSSCCCTTSCBCTTCCTTCCEEECSSSTTCEEECCCC
T ss_pred             CccCCCCCCCCCccccccCCCCCccccccccCCcccccccccCcccCcccccccCCCCCCCCceeEecCCCCCeEeCCCC
Confidence            45899999999999999999999999999999999999999999999999999999999889999999999999999999


Q ss_pred             CCCCCCc
Q psy5539         264 TCADSMQ  270 (653)
Q Consensus       264 ~C~~~~~  270 (653)
                      .|.+...
T Consensus        84 ~C~~~~~   90 (109)
T d1a0ha1          84 YCEEPVD   90 (109)
T ss_dssp             BSSCCCC
T ss_pred             cCCCCCC
Confidence            9987543


No 72 
>d1pmla_ g.14.1.1 (A:) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94  E-value=1.4e-27  Score=196.98  Aligned_cols=82  Identities=29%  Similarity=0.731  Sum_probs=72.2

Q ss_pred             cccccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCCC---CCCCCCccCCCCCCCCCCeEEEe-CCCcceeec
Q psy5539         185 YDCIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFPE---LNNSENYCRNAGGEEPSPWCYTM-DPNVRWQRC  260 (653)
Q Consensus       185 ~~C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~~---~~~~~nyCRNp~~~~~~pWC~~~-~~~~~~~~C  260 (653)
                      +|||.|+|.+|||++++|.+|++||.|+++.++.|.+.+..++.   ..+.|||||||||+. +|||||. ++.++||||
T Consensus         1 ~dCy~g~G~~YrG~~~~T~sG~~C~~W~s~~~~~~~~~~~~~~~~~~~~~~hNyCRNP~g~~-~PWCy~~~~~~~~we~C   79 (86)
T d1pmla_           1 SDCYFGNGSAYRGTHSLTESGASCLPWNSMILIGKVYTAQNPSAQALGLGKHNYCRNPDGDA-KPWCHVLKNRRLTWEYC   79 (86)
T ss_dssp             CCSBCTTSTTCCCCCCBBTTSCBCCCTTCGGGTTCSSSTTSTTHHHHTCSSSCCCBCSSCCS-SCEEEEEETTEEEEEEB
T ss_pred             CcCccCCCCCcccceeECCCCCccCCCcCCCccccccccccCcccccCccccccccCCCCCc-cceEEEeCCCCceeEeC
Confidence            47999999999999999999999999999999988887666553   346899999999986 8999996 667899999


Q ss_pred             ccCCCCC
Q psy5539         261 EIPTCAD  267 (653)
Q Consensus       261 ~ip~C~~  267 (653)
                      +||.|+.
T Consensus        80 ~ip~C~s   86 (86)
T d1pmla_          80 DVPSCST   86 (86)
T ss_dssp             CCCBTTC
T ss_pred             CCccCCC
Confidence            9999973


No 73 
>d2i9aa2 g.14.1.1 (A:50-132) Urokinase-type plasminogen activator {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=4.4e-27  Score=192.86  Aligned_cols=79  Identities=29%  Similarity=0.639  Sum_probs=69.9

Q ss_pred             cccCCccccceeeeccCCCCcccccCCCCCCCCCCCCCCCC---CCCCCCCccCCCCCCCCCCeEEEe-CCCcceeeccc
Q psy5539         187 CIRGRGRFYQGTVNTTVGGLACQRWDAKEPHAHERPPPVFP---ELNNSENYCRNAGGEEPSPWCYTM-DPNVRWQRCEI  262 (653)
Q Consensus       187 C~~~~g~~yrg~~~~t~sg~~C~~W~~~~~~~~~~~~~~~~---~~~~~~nyCRNp~~~~~~pWC~~~-~~~~~~~~C~i  262 (653)
                      ||.|+|..|||++++|.+|++||+|+++.++.+.+.+..++   ...+.||||||||++. +|||||. ++.++||||+|
T Consensus         1 Cy~g~G~~YrG~~s~T~sG~~C~~W~s~~~~~~~~~~~~~~~~~~~~~~hNyCRNP~~~~-~PWCy~~~~~~~~~e~C~i   79 (83)
T d2i9aa2           1 CYEGNGHFYRGKASTDTMGRPCLPWNSATVLQQTYHAHRSDALQLGLGKHNYCRNPDNRR-RPWCYVQVGLKPLVQECMV   79 (83)
T ss_dssp             EECTTCTTCCSCCCBBTTSCBCCCTTSTTGGGSSSCTTSTTHHHHTCCSSCCCBCTTCBS-SCEEEEEETTEEEEEEBSC
T ss_pred             CcCCCCCcccccceecCCCCcCCCCCCCCCcccccCcccCCcccccccCcccccCCCCCc-CceeEEecCCCeeeEecCC
Confidence            89999999999999999999999999999998877666554   3457899999999986 9999995 45578999999


Q ss_pred             CCCC
Q psy5539         263 PTCA  266 (653)
Q Consensus       263 p~C~  266 (653)
                      |.|+
T Consensus        80 p~Cs   83 (83)
T d2i9aa2          80 HDCA   83 (83)
T ss_dssp             EECC
T ss_pred             CcCc
Confidence            9996


No 74 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.88  E-value=9.7e-23  Score=195.37  Aligned_cols=165  Identities=18%  Similarity=0.182  Sum_probs=119.0

Q ss_pred             eEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEcccccc-----------------HHHHHHHHHHHHHHhhCCCCcc
Q psy5539         368 IYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEAS-----------------EYLQTDFEREACLLAEFDHPNI  430 (653)
Q Consensus       368 ~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~-----------------~~~~~~f~~Ei~il~~l~HpnI  430 (653)
                      .+.+.||+|+||+||+|++.      +++.||||+++....                 ......+.+|...+.++.|.++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~------~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v   76 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSE------KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAV   76 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEET------TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSS
T ss_pred             hhCCEeeeCcceEEEEEECC------CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence            46788999999999999862      467899998753211                 1223456678999999999999


Q ss_pred             ceEEeEEecCCceEEEEeecCCCChHHHHhhcCCCCCcCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHhhhCCce
Q psy5539         431 VKLLGVCAVGKPMCLLFEYMGRGDLNDFLRICSPNNYINGTYSSMESSIHRVPQLSTCDLITIALQIASGMVYLSDRKFV  510 (653)
Q Consensus       431 v~l~g~~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gL~yLH~~~iv  510 (653)
                      +..+++.    ..+++|||++++.+.+                           ++......++.|++.+|.|||+++|+
T Consensus        77 ~~~~~~~----~~~lvme~~~~~~~~~---------------------------l~~~~~~~i~~ql~~~l~~lH~~gii  125 (191)
T d1zara2          77 PKVYAWE----GNAVLMELIDAKELYR---------------------------VRVENPDEVLDMILEEVAKFYHRGIV  125 (191)
T ss_dssp             CCEEEEE----TTEEEEECCCCEEGGG---------------------------CCCSCHHHHHHHHHHHHHHHHHTTEE
T ss_pred             ceEEEec----CCEEEEEeeccccccc---------------------------hhhHHHHHHHHHHHHHHHHHhhCCEE
Confidence            9988663    2479999998754422                           23344568999999999999999999


Q ss_pred             ecCCCCCCEeEcCCCcEEEeccCccccccccccccCCCCCCCcccccc--ch---hhccCCCCCchhHHHHHHHH
Q psy5539         511 HRDLATRNCLINDQMVVKIADFGLSRKMYLQDYYKGDENDAIPVRWMP--LE---SILYNKYTVESDVWAFGVCL  580 (653)
Q Consensus       511 HrDLkp~NILl~~~~~vkI~DfGla~~~~~~~~~~~~~~~~~t~~y~a--PE---~~~~~~~t~ksDVwSlGvvl  580 (653)
                      ||||||+|||+++++ ++|+|||+|........          ..|..  .+   .....+|+.++|+||..--+
T Consensus       126 HrDiKP~NILv~~~~-~~liDFG~a~~~~~~~~----------~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         126 HGDLSQYNVLVSEEG-IWIIDFPQSVEVGEEGW----------REILERDVRNIITYFSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             CSCCSTTSEEEETTE-EEECCCTTCEETTSTTH----------HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             EccCChhheeeeCCC-EEEEECCCcccCCCCCc----------HHHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence            999999999999765 88999999965421110          01111  00   11245788999999975433


No 75 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.27  E-value=1.6e-06  Score=84.53  Aligned_cols=85  Identities=16%  Similarity=0.063  Sum_probs=57.7

Q ss_pred             CeeEEeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCC-CCccceEEeEEecCCceE
Q psy5539         366 DIIYVRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFD-HPNIVKLLGVCAVGKPMC  444 (653)
Q Consensus       366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~-HpnIv~l~g~~~~~~~~~  444 (653)
                      .++.++..+.++.+.||+...       ++..+++|+....... ....+.+|...+..+. +--+.+++.+...++..+
T Consensus        15 ~~~~~~~~~G~s~~~v~rv~~-------~~~~~vlk~~~~~~~~-~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_          15 KYRCVKDTEGMSPAKVYKLVG-------ENENLYLKMTDSRYKG-TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             TSEEEECSCCCSSSEEEEEEC-------SSCEEEEEEECGGGTT-STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             ceEEEEcCCCCCCCcEEEEEe-------CCCeEEEEEcCCCccc-chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence            456666655566679998863       2345778877543221 1224677888877764 333567788888888899


Q ss_pred             EEEeecCCCChHHH
Q psy5539         445 LLFEYMGRGDLNDF  458 (653)
Q Consensus       445 LV~Ey~~~gsL~~~  458 (653)
                      +|||++++.++.+.
T Consensus        87 lv~~~l~G~~~~~~  100 (263)
T d1j7la_          87 LLMSEADGVLCSEE  100 (263)
T ss_dssp             EEEECCSSEEHHHH
T ss_pred             EEEEeccccccccc
Confidence            99999999877543


No 76 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=97.77  E-value=4.3e-05  Score=73.56  Aligned_cols=74  Identities=22%  Similarity=0.137  Sum_probs=50.3

Q ss_pred             ecccC-CeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCC--CccceEEeEEecCCceEEEEee
Q psy5539         373 LGQGA-FGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDH--PNIVKLLGVCAVGKPMCLLFEY  449 (653)
Q Consensus       373 LG~G~-fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~H--pnIv~l~g~~~~~~~~~LV~Ey  449 (653)
                      +..|. -+.||+....      .+..+++|.......    ..+.+|+..++.+..  -.+.+++++...++..++||||
T Consensus        18 ~~~G~s~~~v~r~~~~------~~~~~vlK~~~~~~~----~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~   87 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSAQ------GRPVLFVKTDLSGAL----NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE   87 (255)
T ss_dssp             CSCTTSSCEEEEEECT------TSCCEEEEEECSCTT----SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred             cCCcccCCeEEEEEeC------CCCEEEEEeCCccCH----hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEe
Confidence            44444 3679998753      234588888765432    246677777776643  3356778888888889999999


Q ss_pred             cCCCChH
Q psy5539         450 MGRGDLN  456 (653)
Q Consensus       450 ~~~gsL~  456 (653)
                      +++.++.
T Consensus        88 i~G~~~~   94 (255)
T d1nd4a_          88 VPGQDLL   94 (255)
T ss_dssp             CSSEETT
T ss_pred             eeccccc
Confidence            9876553


No 77 
>d1ijya_ a.141.1.1 (A:) Frizzled 8 (FZ8) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.68  E-value=1.3e-05  Score=68.65  Aligned_cols=86  Identities=17%  Similarity=0.422  Sum_probs=58.5

Q ss_pred             CccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHH--HHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCC
Q psy5539          33 GYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMA--LWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPM  110 (653)
Q Consensus        33 g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~--~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~  110 (653)
                      .-|++-+-..|+. |..+ .++|.....  ...++| ....  .|..+   +...|++.+..+||.-+||.|.+.+..+ 
T Consensus         2 ~~C~pi~~~~C~~-l~Yn-~T~~PN~~~--h~~~~e-~~~~~~~~~~l---~~~~C~~~l~~flCs~~~P~C~~~~~~~-   72 (122)
T d1ijya_           2 LACQEITVPLCKG-IGYE-YTYMPNQFN--HDTQDE-AGLEVHQFWPL---VEIQCSPDLKFFLCSMYTPICLEDYKKP-   72 (122)
T ss_dssp             CCCEECCCGGGTT-SSCC-EECSSCTTC--CCSHHH-HHHHHGGGHHH---HHHTSCTTHHHHHHHHHSCBCCSSCCSC-
T ss_pred             CeeeecChhhhCC-CCCC-ceECcCccc--CcCHHH-HHHHHHHHhhh---hccccCHhHHHHHhhhccCcccCCCCCc-
Confidence            4688989999987 6654 455554432  112222 2222  24445   4458999999999999999997655433 


Q ss_pred             CCCcccchhhhhhhccchh
Q psy5539         111 SLPLCYEDCIAVRYSFCYN  129 (653)
Q Consensus       111 ~~p~C~~~c~~~~~~~c~~  129 (653)
                       .+-||..|+.++.. |..
T Consensus        73 -~~PCrs~Ceev~~~-C~~   89 (122)
T d1ijya_          73 -LPPCRSVCERAKAG-CAP   89 (122)
T ss_dssp             -CCBCHHHHHHHHHH-HHH
T ss_pred             -cCccHHHHHHHHhh-hHH
Confidence             67799999999955 843


No 78 
>d1ijxa_ a.141.1.1 (A:) Secreted Frizzled-related protein 3 (SFRP-3;fzb) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.46  E-value=3.4e-05  Score=66.29  Aligned_cols=88  Identities=18%  Similarity=0.370  Sum_probs=59.1

Q ss_pred             CccccCccchhhhhhcCCCeEEEcCCCcCCcccHHHHHHHHHHHHHHHhhccccHHHHHHhhhhhcCCCCCCCCCCCCCC
Q psy5539          33 GYCSQYNGKICKNYLNRTGRVWFNSSLESAGGDLNEQIVMALWKEMIAILANPCKQAAEKLLCTYAFPQCVTSNGIPMSL  112 (653)
Q Consensus        33 g~c~~y~g~~c~~~l~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~C~~~a~~~lC~~~f~~c~~~~~~~~~~  112 (653)
                      |.|++-+-..|+. |..+ .++|.....   ...++.+.+.+ ..+...+...|++....++|.-+||.|...+. ..+.
T Consensus         1 ~~C~pi~~~~C~~-l~Yn-~T~~PN~~g---h~~~~e~~~~~-~~~~~l~~~~C~p~~~~flCs~~~P~C~~~~~-~~~~   73 (125)
T d1ijxa_           1 AACEPVRIPLCKS-LPWE-MTKMPNHLH---HSTQANAILAM-EQFEGLLGTHCSPDLLFFLCAMYAPICTIDFQ-HEPI   73 (125)
T ss_dssp             CCCEECCCGGGGG-SSCC-EECSSCTTC---CSSHHHHHHHH-HTTHHHHTTTCCTTHHHHHHHHHSCBCBSSCS-SSCC
T ss_pred             CcCccCCcchhcC-CCCC-ceECcCcCC---CcCHHHHHHHH-HHHHHHhhcccCHHHHHHHHHhhCCCccCCCC-CccC
Confidence            5799999999988 6654 566654432   12233333333 33323355689999999999999999976443 2345


Q ss_pred             Ccccchhhhhhhccch
Q psy5539         113 PLCYEDCIAVRYSFCY  128 (653)
Q Consensus       113 p~C~~~c~~~~~~~c~  128 (653)
                      +-||..|+.++.. |.
T Consensus        74 ~PCrs~Ce~v~~~-C~   88 (125)
T d1ijxa_          74 KPCKSVCERARQG-CE   88 (125)
T ss_dssp             CBCHHHHHHHHHH-HH
T ss_pred             CcCHHHHHHHHhh-hH
Confidence            5599999999844 74


No 79 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=97.31  E-value=0.00027  Score=72.86  Aligned_cols=78  Identities=14%  Similarity=0.108  Sum_probs=46.8

Q ss_pred             EeeecccCCeeEEEEEeCCCCCCccceEEEEEEccccc------cHHHHHHHHHHHHHHhhCC-C--CccceEEeEEecC
Q psy5539         370 VRDLGQGAFGRVFQAKAPGLLKHEEFTLVAVKMLKDEA------SEYLQTDFEREACLLAEFD-H--PNIVKLLGVCAVG  440 (653)
Q Consensus       370 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~------~~~~~~~f~~Ei~il~~l~-H--pnIv~l~g~~~~~  440 (653)
                      .+.||.|....||+++..     ..++.++||.-....      ......+...|.+.|+.+. +  ..+.+++.+  +.
T Consensus        31 ~~eig~G~~N~vfrV~~~-----~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~  103 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQ-----EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DT  103 (392)
T ss_dssp             EEECCSSSSEEEEEEEC---------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ET
T ss_pred             EEEeCCCceEeEEEEEeC-----CCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cC
Confidence            556899999999999753     234678888643211      0001123456777776652 2  345566654  44


Q ss_pred             CceEEEEeecCCCC
Q psy5539         441 KPMCLLFEYMGRGD  454 (653)
Q Consensus       441 ~~~~LV~Ey~~~gs  454 (653)
                      +..++|||++++..
T Consensus       104 ~~~~lvmE~L~~~~  117 (392)
T d2pula1         104 EMAVTVMEDLSHLK  117 (392)
T ss_dssp             TTTEEEECCCTTSE
T ss_pred             CCCEEEEeccCCcc
Confidence            56689999997654


No 80 
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=96.07  E-value=0.013  Score=59.65  Aligned_cols=82  Identities=16%  Similarity=0.258  Sum_probs=51.2

Q ss_pred             CeeEEeeecccCCeeEEEEEeCCCCC--CccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCccc-eEEeEEecCCc
Q psy5539         366 DIIYVRDLGQGAFGRVFQAKAPGLLK--HEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNIV-KLLGVCAVGKP  442 (653)
Q Consensus       366 ~~~~~~~LG~G~fG~Vy~a~~~~~~~--~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnIv-~l~g~~~~~~~  442 (653)
                      +++ ++.|+.|--=.+|+++.+....  ......|.+++.......   .+..+|..+++.+.-.++. ++++++..   
T Consensus        44 ~l~-v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~~~---idr~~E~~i~~~ls~~gl~Pkll~~~~~---  116 (395)
T d1nw1a_          44 HLR-ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETE---SHLVAESVIFTLLSERHLGPKLYGIFSG---  116 (395)
T ss_dssp             GEE-EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCH---HHHHHHHHHHHHHHHTTSSSCEEEEETT---
T ss_pred             ceE-EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcchh---hHHHHHHHHHHHHHhCCCCCeEEEEcCC---
Confidence            444 4568888889999998753211  123345777766532221   2456788888887533444 77777643   


Q ss_pred             eEEEEeecCCCCh
Q psy5539         443 MCLLFEYMGRGDL  455 (653)
Q Consensus       443 ~~LV~Ey~~~gsL  455 (653)
                       .+|+||+++..|
T Consensus       117 -g~I~efi~g~~l  128 (395)
T d1nw1a_         117 -GRLEEYIPSRPL  128 (395)
T ss_dssp             -EEEECCCCEEEC
T ss_pred             -ceEEEEeccccC
Confidence             689999987544


No 81 
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=95.92  E-value=0.0089  Score=59.28  Aligned_cols=69  Identities=14%  Similarity=0.145  Sum_probs=42.3

Q ss_pred             CeeEEEEEeCCCCCCccceEEEEEEccccccHHHHHHHHHHHHHHhhCCCCcc--ceEEe-----EEecCCceEEEEeec
Q psy5539         378 FGRVFQAKAPGLLKHEEFTLVAVKMLKDEASEYLQTDFEREACLLAEFDHPNI--VKLLG-----VCAVGKPMCLLFEYM  450 (653)
Q Consensus       378 fG~Vy~a~~~~~~~~~~~~~VAVK~l~~~~~~~~~~~f~~Ei~il~~l~HpnI--v~l~g-----~~~~~~~~~LV~Ey~  450 (653)
                      --.||+++.      .++..+++|+.+.+...  .+++..|...+..|....+  +..+.     ....++..+.+++++
T Consensus        35 EN~vy~v~~------~dg~~~VlK~~rp~~~s--~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~  106 (325)
T d1zyla1          35 ENRVYQFQD------EDRRRFVVKFYRPERWT--ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  106 (325)
T ss_dssp             SSEEEEECC------TTCCCEEEEEECTTTSC--HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             cceeEEEEc------CCCCEEEEEEeCCCCCC--HHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeec
Confidence            358999875      35677999998765321  2456778888777742222  11111     123456678899998


Q ss_pred             CCCC
Q psy5539         451 GRGD  454 (653)
Q Consensus       451 ~~gs  454 (653)
                      +|..
T Consensus       107 ~G~~  110 (325)
T d1zyla1         107 GGRQ  110 (325)
T ss_dssp             CCEE
T ss_pred             CCcC
Confidence            7643


No 82 
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=93.49  E-value=0.4  Score=46.17  Aligned_cols=31  Identities=19%  Similarity=0.291  Sum_probs=27.8

Q ss_pred             CCceecCCCCCCEeEcCCCcEEEeccCcccc
Q psy5539         507 RKFVHRDLATRNCLINDQMVVKIADFGLSRK  537 (653)
Q Consensus       507 ~~ivHrDLkp~NILl~~~~~vkI~DfGla~~  537 (653)
                      .++||+|+.++||+++++...-|+||+.+..
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccccCCcchhhhhcccccceeEeccccccc
Confidence            3799999999999999998889999999853


No 83 
>d1ki0a2 g.14.1.1 (A:164-250) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.70  E-value=0.75  Score=35.41  Aligned_cols=25  Identities=20%  Similarity=0.547  Sum_probs=20.3

Q ss_pred             CCCCCCCCCCCCCcccchhhhhhhccc
Q psy5539         101 QCVTSNGIPMSLPLCYEDCIAVRYSFC  127 (653)
Q Consensus       101 ~c~~~~~~~~~~p~C~~~c~~~~~~~c  127 (653)
                      .|++++..  +.|||+..-..++++||
T Consensus        51 yCRNP~~~--~~PWCy~~~~~~~weyC   75 (87)
T d1ki0a2          51 YCRNPDRE--LRPWCFTTDPNKRWELC   75 (87)
T ss_dssp             CCBCSSSC--SSCEEEBSCTTCSEEEC
T ss_pred             cccCCCCC--cccceEeccCCcceEeC
Confidence            47777765  49999998778889999


No 84 
>d1i71a_ g.14.1.1 (A:) Apolipoprotein A {Human (Homo sapiens), IV-7 variant [TaxId: 9606]}
Probab=69.86  E-value=0.7  Score=35.23  Aligned_cols=25  Identities=28%  Similarity=0.695  Sum_probs=20.1

Q ss_pred             CCCCCCCCCCCCCcccchhhhhhhccc
Q psy5539         101 QCVTSNGIPMSLPLCYEDCIAVRYSFC  127 (653)
Q Consensus       101 ~c~~~~~~~~~~p~C~~~c~~~~~~~c  127 (653)
                      .|++++..  +.|||+..-..++++||
T Consensus        50 yCRNP~~~--~~PWCyv~~~~~~~eyC   74 (83)
T d1i71a_          50 YCRNPDAE--IRPWCYTMDPSVRWEYC   74 (83)
T ss_dssp             CCBCSSSC--SSCEEEBSSTTCCEEEB
T ss_pred             cccCCCCC--CCceEEecCCCcceEeC
Confidence            47666664  48999998788889999


No 85 
>d2qj2a2 g.14.1.1 (A:127-209) NK1 fragment of hepatocyte growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.00  E-value=1.4  Score=33.41  Aligned_cols=28  Identities=29%  Similarity=0.587  Sum_probs=21.5

Q ss_pred             CCCCCCCCCCCCCCCcccchhhhhhhccc
Q psy5539          99 FPQCVTSNGIPMSLPLCYEDCIAVRYSFC  127 (653)
Q Consensus        99 f~~c~~~~~~~~~~p~C~~~c~~~~~~~c  127 (653)
                      .-.|++++.. ..+|||+..-..++++||
T Consensus        48 hNyCRNP~~~-~~~PWCy~~~~~~~~eyC   75 (83)
T d2qj2a2          48 ENYCRNPRGE-EGGPWCFTSNPEVRYEVC   75 (83)
T ss_dssp             TTCCBCSSCC-TTCSEEEBSSTTCCEEEB
T ss_pred             cccccCCCCC-CCCcceEeCCCCcceEec
Confidence            4568776543 358999998778889999


No 86 
>d2hpqp_ g.14.1.1 (P:) Meizothrombin {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.87  E-value=1.7  Score=32.57  Aligned_cols=26  Identities=19%  Similarity=0.480  Sum_probs=20.6

Q ss_pred             CCCCCCCCCCCCCcccchhhhhhhccc
Q psy5539         101 QCVTSNGIPMSLPLCYEDCIAVRYSFC  127 (653)
Q Consensus       101 ~c~~~~~~~~~~p~C~~~c~~~~~~~c  127 (653)
                      .|++++..+ ..|||+..-..++++||
T Consensus        49 yCRNP~~~~-~~PWCyt~~~~~~~eyC   74 (79)
T d2hpqp_          49 FCRNPDGDE-EGVWCYVAGKPGDFGYC   74 (79)
T ss_dssp             CCBCSSCCS-SCCBCBCSSSTTCBCCB
T ss_pred             cccCCCCCC-CCcceEeCCCCcceEeC
Confidence            487766543 57999998888899999


No 87 
>d1eaka4 g.14.1.2 (A:278-335) Gelatinase A (MMP-2) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.45  E-value=2.4  Score=29.73  Aligned_cols=29  Identities=24%  Similarity=0.629  Sum_probs=19.8

Q ss_pred             CCccCCCCCCCCCCeEEEe---CCCcceeecc
Q psy5539         233 ENYCRNAGGEEPSPWCYTM---DPNVRWQRCE  261 (653)
Q Consensus       233 ~nyCRNp~~~~~~pWC~~~---~~~~~~~~C~  261 (653)
                      ++-|=.-+....+|||-|+   +...+|.||.
T Consensus        25 y~~Ct~~~~~~~~~WCaTt~nyd~d~~W~yC~   56 (58)
T d1eaka4          25 YDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCP   56 (58)
T ss_dssp             ESSCBCTTCSSCCCEEESSSCTTTSCCEEECC
T ss_pred             ecccccCCCCCCccCcCCccccCcCCccccCC
Confidence            4556555544458999996   3447899994


No 88 
>d5hpga_ g.14.1.1 (A:) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.22  E-value=1.6  Score=33.12  Aligned_cols=27  Identities=26%  Similarity=0.648  Sum_probs=20.2

Q ss_pred             CCCCCCCCCCCCCCcccchhhhhhhccc
Q psy5539         100 PQCVTSNGIPMSLPLCYEDCIAVRYSFC  127 (653)
Q Consensus       100 ~~c~~~~~~~~~~p~C~~~c~~~~~~~c  127 (653)
                      -.|++++.. ...|||+..-..+++++|
T Consensus        50 NyCRNP~~~-~~~PWCy~~~~~~~~eyC   76 (84)
T d5hpga_          50 NYCRNPDGD-VGGPWCYTTNPRKLYDYC   76 (84)
T ss_dssp             TCCBCTTCC-TTCCEEEBSCTTCCEEEC
T ss_pred             ccccCCCCC-cCCCCeEeCCCCcceeeC
Confidence            347666543 358999998778889999


No 89 
>d1e88a2 g.14.1.2 (A:102-160) Fibronectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.18  E-value=1.2  Score=31.48  Aligned_cols=30  Identities=20%  Similarity=0.602  Sum_probs=19.9

Q ss_pred             CCccCCCCCCCCCCeEEEeC---CCcceeeccc
Q psy5539         233 ENYCRNAGGEEPSPWCYTMD---PNVRWQRCEI  262 (653)
Q Consensus       233 ~nyCRNp~~~~~~pWC~~~~---~~~~~~~C~i  262 (653)
                      .+-|=.-+....+|||-|+.   ...+|.||.+
T Consensus        26 y~~Ct~~g~~~~~~WCaTT~nyd~d~~W~yCP~   58 (59)
T d1e88a2          26 YTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPM   58 (59)
T ss_dssp             ECSCCCTTCCSSCCEEESSTBHHHHCCEEECCC
T ss_pred             eccccCCCCCCCcCCcCCccccccCCccccCCC
Confidence            44554444444589999963   3378999975


No 90 
>d1ki0a3 g.14.1.1 (A:251-333) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.75  E-value=1.5  Score=33.18  Aligned_cols=25  Identities=28%  Similarity=0.737  Sum_probs=20.3

Q ss_pred             CCCCCCCCCCCCCcccchhhhhhhccc
Q psy5539         101 QCVTSNGIPMSLPLCYEDCIAVRYSFC  127 (653)
Q Consensus       101 ~c~~~~~~~~~~p~C~~~c~~~~~~~c  127 (653)
                      .|++++..  +.|||+..-..+++++|
T Consensus        54 yCRNP~~~--~~PWCy~~~~~~~weyC   78 (83)
T d1ki0a3          54 YCRNPDGK--RAPWCHTTNSQVRWEYC   78 (83)
T ss_dssp             CCBCCSSC--SSCEEEBSSTTCSEEEC
T ss_pred             cccCCCCC--CCcceEeCCCCcceEeC
Confidence            57777665  48999998788889999


No 91 
>d1nl1a1 g.14.1.1 (A:66-147) Prothrombin {Cow (Bos taurus) [TaxId: 9913]}
Probab=58.56  E-value=1.9  Score=32.50  Aligned_cols=26  Identities=27%  Similarity=0.684  Sum_probs=20.0

Q ss_pred             CCCCCCCCCCCCCcccchhhhhhhccc
Q psy5539         101 QCVTSNGIPMSLPLCYEDCIAVRYSFC  127 (653)
Q Consensus       101 ~c~~~~~~~~~~p~C~~~c~~~~~~~c  127 (653)
                      .|++++. ....|||+..-..+++++|
T Consensus        49 yCRNP~~-~~~~PWCyv~~~~~~~eyC   74 (82)
T d1nl1a1          49 FCRNPDG-SITGPWCYTTSPTLRREEC   74 (82)
T ss_dssp             CCBCTTC-CTTCSEEEBSSTTCCEEEB
T ss_pred             cccCCCC-CCCCCCeEeCCCCCceeeC
Confidence            4776654 2458999998778889999


No 92 
>d1ki0a1 g.14.1.1 (A:81-163) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.00  E-value=1.7  Score=32.89  Aligned_cols=26  Identities=27%  Similarity=0.630  Sum_probs=19.6

Q ss_pred             CCCCCCCCCCCCCcccchhhhhhhccc
Q psy5539         101 QCVTSNGIPMSLPLCYEDCIAVRYSFC  127 (653)
Q Consensus       101 ~c~~~~~~~~~~p~C~~~c~~~~~~~c  127 (653)
                      .|++++.. ...|||+..-..+++++|
T Consensus        52 yCRNP~~~-~~~PWCy~~~~~~~~e~C   77 (83)
T d1ki0a1          52 YCRNPDND-PQGPWCYTTDPEKRYDYC   77 (83)
T ss_dssp             CCBCTTCC-TTCCEEEBSCTTCSEEEC
T ss_pred             cccCCCCC-CCCCceEecCCCcceEcC
Confidence            47666543 347999988778889999


No 93 
>d1pmla_ g.14.1.1 (A:) Plasminogen {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.68  E-value=1.6  Score=33.29  Aligned_cols=25  Identities=20%  Similarity=0.543  Sum_probs=18.7

Q ss_pred             CCCCCCCCCCCCCcccch-hhhhhhccc
Q psy5539         101 QCVTSNGIPMSLPLCYED-CIAVRYSFC  127 (653)
Q Consensus       101 ~c~~~~~~~~~~p~C~~~-c~~~~~~~c  127 (653)
                      .|++++..  +.|||+.. -..+++++|
T Consensus        54 yCRNP~g~--~~PWCy~~~~~~~~we~C   79 (86)
T d1pmla_          54 YCRNPDGD--AKPWCHVLKNRRLTWEYC   79 (86)
T ss_dssp             CCBCSSCC--SSCEEEEEETTEEEEEEB
T ss_pred             cccCCCCC--ccceEEEeCCCCceeEeC
Confidence            37666664  48999975 467789999


No 94 
>d1eaka3 g.14.1.2 (A:217-277) Gelatinase A (MMP-2) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.96  E-value=3.4  Score=29.17  Aligned_cols=29  Identities=24%  Similarity=0.637  Sum_probs=18.7

Q ss_pred             CCccCCCCCCCCCCeEEEe---CCCcceeecc
Q psy5539         233 ENYCRNAGGEEPSPWCYTM---DPNVRWQRCE  261 (653)
Q Consensus       233 ~nyCRNp~~~~~~pWC~~~---~~~~~~~~C~  261 (653)
                      .+-|=.-+....+|||-|+   +...+|.||.
T Consensus        28 y~~Ct~~g~~~~~~WCatt~~yd~d~~W~yCp   59 (61)
T d1eaka3          28 YNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCP   59 (61)
T ss_dssp             ESSCBCTTCSSCCCEEESSSBTTTSCCEEECC
T ss_pred             ecCcccCCCCCCccCcCCccccccCCccccCC
Confidence            3445444433448999996   3447899994


No 95 
>d1eaka5 g.14.1.2 (A:336-393) Gelatinase A (MMP-2) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.79  E-value=1.8  Score=30.33  Aligned_cols=29  Identities=28%  Similarity=0.731  Sum_probs=19.5

Q ss_pred             CCccCCCCCCCCCCeEEEeCC---Ccceeecc
Q psy5539         233 ENYCRNAGGEEPSPWCYTMDP---NVRWQRCE  261 (653)
Q Consensus       233 ~nyCRNp~~~~~~pWC~~~~~---~~~~~~C~  261 (653)
                      .+-|=.-|....+|||-|+..   ..+|.||.
T Consensus        25 y~~Ct~~~~~~~~~WCatt~nyd~d~~W~yCp   56 (58)
T d1eaka5          25 YESCTSAGRSDGKMWCATTANYDDDRKWGFCP   56 (58)
T ss_dssp             ESSCBCTTCSSSCCEEESSSCHHHHCCEEECC
T ss_pred             EeCCccCCCCCCccCcCcccccccCCccccCC
Confidence            455655454445899999743   36899994


No 96 
>d1l6ja3 g.14.1.2 (A:216-274) Gelatinase B (MMP-9) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.39  E-value=2  Score=30.27  Aligned_cols=29  Identities=28%  Similarity=0.688  Sum_probs=19.2

Q ss_pred             CCccCCCCCCCCCCeEEEeC---CCcceeecc
Q psy5539         233 ENYCRNAGGEEPSPWCYTMD---PNVRWQRCE  261 (653)
Q Consensus       233 ~nyCRNp~~~~~~pWC~~~~---~~~~~~~C~  261 (653)
                      .+-|=.-+....+|||-|+.   ...+|.||.
T Consensus        26 y~~Ct~~~~~~~~~WCaTT~nyd~d~~W~yC~   57 (59)
T d1l6ja3          26 YSACTTDGRSDGLPWCSTTANYDTDDRFGFCP   57 (59)
T ss_dssp             ESSCBCTTCSSCCCEEESSSBHHHHCCEEECS
T ss_pred             eccCccCCCCCCcCEeCcccccccCCccccCc
Confidence            44555444444589999973   347899994


No 97 
>d1a0ha1 g.14.1.1 (A:164-270) Meizothrombin {Cow (Bos taurus) [TaxId: 9913]}
Probab=44.56  E-value=4.1  Score=32.44  Aligned_cols=27  Identities=19%  Similarity=0.444  Sum_probs=20.8

Q ss_pred             CCCCCCCCCCCCCCcccchhhhhhhccc
Q psy5539         100 PQCVTSNGIPMSLPLCYEDCIAVRYSFC  127 (653)
Q Consensus       100 ~~c~~~~~~~~~~p~C~~~c~~~~~~~c  127 (653)
                      -.|++++.. ...|||+..-..+++++|
T Consensus        54 NyCRNPdg~-~~~PWCYv~~~~~~~eyC   80 (109)
T d1a0ha1          54 NFCRNPDGD-EEGAWCYVADQPGDFEYC   80 (109)
T ss_dssp             TSCBCTTCC-TTCCEEECSSSTTCEEEC
T ss_pred             ccccCCCCC-CCCceeEecCCCCCeEeC
Confidence            358776654 347999998788899999


No 98 
>d1h8pa2 g.14.1.2 (A:68-109) PDC-109, collagen-binding type II domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=41.30  E-value=2.9  Score=27.17  Aligned_cols=17  Identities=24%  Similarity=0.755  Sum_probs=12.2

Q ss_pred             CCCeEEEeCC---Ccceeec
Q psy5539         244 PSPWCYTMDP---NVRWQRC  260 (653)
Q Consensus       244 ~~pWC~~~~~---~~~~~~C  260 (653)
                      .+|||-|+..   ..+|.||
T Consensus        23 ~~~WCatt~nyd~d~~W~yC   42 (42)
T d1h8pa2          23 WMSWCSLSPNYDKDRAWKYC   42 (42)
T ss_dssp             SSCEEESSSBHHHHCCEEEC
T ss_pred             CCcCcCcccccccCCccccC
Confidence            3799999632   3678887


No 99 
>d1e88a1 g.14.1.2 (A:42-101) Fibronectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.02  E-value=6.5  Score=27.55  Aligned_cols=29  Identities=21%  Similarity=0.595  Sum_probs=20.2

Q ss_pred             CCccCCCCCCCCCCeEEEeCC---Ccceeecc
Q psy5539         233 ENYCRNAGGEEPSPWCYTMDP---NVRWQRCE  261 (653)
Q Consensus       233 ~nyCRNp~~~~~~pWC~~~~~---~~~~~~C~  261 (653)
                      ++-|=.-+....+|||-|+..   ..+|.||.
T Consensus        26 y~~Ct~~g~~~~~~WCatT~nyd~d~~W~yC~   57 (60)
T d1e88a1          26 FYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCT   57 (60)
T ss_dssp             ESSCBCSSCCSSSCEEESSSCHHHHCCEEECS
T ss_pred             eecccCCCCCCCccCcCCccccccCCcccCCc
Confidence            556665555555999998643   37799996


No 100
>d2i9aa2 g.14.1.1 (A:50-132) Urokinase-type plasminogen activator {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.06  E-value=3.7  Score=30.88  Aligned_cols=25  Identities=20%  Similarity=0.491  Sum_probs=18.2

Q ss_pred             CCCCCCCCCCCCCcccchh-hhhhhccc
Q psy5539         101 QCVTSNGIPMSLPLCYEDC-IAVRYSFC  127 (653)
Q Consensus       101 ~c~~~~~~~~~~p~C~~~c-~~~~~~~c  127 (653)
                      .|++++..  ..|||+..- ..+++++|
T Consensus        52 yCRNP~~~--~~PWCy~~~~~~~~~e~C   77 (83)
T d2i9aa2          52 YCRNPDNR--RRPWCYVQVGLKPLVQEC   77 (83)
T ss_dssp             CCBCTTCB--SSCEEEEEETTEEEEEEB
T ss_pred             cccCCCCC--cCceeEEecCCCeeeEec
Confidence            37776654  489999854 46678999


No 101
>d1l6ja5 g.14.1.2 (A:332-390) Gelatinase B (MMP-9) type II modules {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.43  E-value=11  Score=26.19  Aligned_cols=29  Identities=24%  Similarity=0.702  Sum_probs=18.3

Q ss_pred             CCccCCCCCCCCCCeEEEeCC---Ccceeecc
Q psy5539         233 ENYCRNAGGEEPSPWCYTMDP---NVRWQRCE  261 (653)
Q Consensus       233 ~nyCRNp~~~~~~pWC~~~~~---~~~~~~C~  261 (653)
                      ++-|=.-+....+|||-|+..   ..+|.||.
T Consensus        27 y~~Ct~~g~~~~~~WCatT~nyd~d~~W~yCp   58 (59)
T d1l6ja5          27 YSTCTSEGRGDGRLWCATTSNFDSDKKWGFCP   58 (59)
T ss_dssp             ECSCBCTTCSSCCCEEESSSBHHHHCCEEECC
T ss_pred             EccccCCCCCCCccCcCcccccCCCCccccCc
Confidence            344544333344899999643   37899994


No 102
>d1jb0i_ f.23.17.1 (I:) Subunit VIII of photosystem I reaction centre, PsaI {Synechococcus elongatus [TaxId: 32046]}
Probab=22.50  E-value=6.6  Score=24.09  Aligned_cols=12  Identities=42%  Similarity=1.090  Sum_probs=8.1

Q ss_pred             HHHHHHHHHhhh
Q psy5539           6 YIAMYLTWILLN   17 (653)
Q Consensus         6 ~~~~~~~~~~~~   17 (653)
                      |.|.||-|||+-
T Consensus         5 yAAsyLPwI~iP   16 (38)
T d1jb0i_           5 YAASFLPWIFIP   16 (38)
T ss_dssp             STTTTHHHHHHH
T ss_pred             hHHHhcchhHHH
Confidence            566777777764


No 103
>d1h8pa1 g.14.1.2 (A:22-67) PDC-109, collagen-binding type II domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.20  E-value=18  Score=23.66  Aligned_cols=22  Identities=27%  Similarity=0.605  Sum_probs=15.4

Q ss_pred             CCCeEEEeC-CCcceeecccCCC
Q psy5539         244 PSPWCYTMD-PNVRWQRCEIPTC  265 (653)
Q Consensus       244 ~~pWC~~~~-~~~~~~~C~ip~C  265 (653)
                      .+|||-|+. -..+|.||.-..|
T Consensus        23 ~~~WCatt~~yd~~W~yC~~~d~   45 (46)
T d1h8pa1          23 LFPWCSLDADYVGRWKYCAQRDY   45 (46)
T ss_dssp             SSCEEESSSBCSSCEEECCGGGS
T ss_pred             CCceeCCCcCcCCCcccCCCCCC
Confidence            389998853 3467999975544


Done!