BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5541
(301 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7PMT1|EXD_ANOGA Homeobox protein extradenticle OS=Anopheles gambiae GN=exd PE=3
SV=2
Length = 362
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/206 (90%), Positives = 192/206 (93%), Gaps = 7/206 (3%)
Query: 18 HAIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 77
+AIEHSDYRAKLAQIR IY QELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ
Sbjct: 136 NAIEHSDYRAKLAQIRQIYHQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 195
Query: 78 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 137
IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS
Sbjct: 196 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 255
Query: 138 EEAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSM---- 193
EEAKEELARKC IT+SQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSM
Sbjct: 256 EEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMGGPP 315
Query: 194 -GASTPMMSPAP--DSVGYSKEANLY 216
GA+TPMMSPAP DS+GYS + Y
Sbjct: 316 SGAATPMMSPAPAQDSMGYSLGSGGY 341
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 41/63 (65%), Gaps = 12/63 (19%)
Query: 248 MED--RM---HNTNMLPNYIEGAND----INTDPQGPRKQDISDILQQILNITDQSLDEA 298
MED RM H M PNY ND ++ DP RKQDI +ILQQI+NITDQSLDEA
Sbjct: 1 MEDPNRMMGGHGGLMPPNYGMPTNDGQAGVDNDP---RKQDIGEILQQIMNITDQSLDEA 57
Query: 299 QAR 301
QAR
Sbjct: 58 QAR 60
>sp|Q29CT2|EXD_DROPS Homeobox protein extradenticle OS=Drosophila pseudoobscura
pseudoobscura GN=exd PE=3 SV=1
Length = 376
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/226 (83%), Positives = 199/226 (88%), Gaps = 14/226 (6%)
Query: 18 HAIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 77
+AIEHSDYRAKLAQIR IY QELEKYEQAC+EFTTHVMNLLREQSRTRPITPKEIERMVQ
Sbjct: 148 NAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIERMVQ 207
Query: 78 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 137
IIH+KFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS
Sbjct: 208 IIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 267
Query: 138 EEAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSM---- 193
EEAKEELARKC IT+SQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSM
Sbjct: 268 EEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMAGPP 327
Query: 194 -GASTPMMSPAP--DSVGYSKEANLYAAKKAAGASPY--SMGASTP 234
G +TPMMSPAP DS+GY+ + Y ++ PY SMG P
Sbjct: 328 SGTTTPMMSPAPPQDSMGYTMGSGGYDQQQ-----PYDNSMGGYDP 368
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 25/26 (96%)
Query: 276 RKQDISDILQQILNITDQSLDEAQAR 301
+++DI +ILQQI++I++QSLDEAQAR
Sbjct: 39 KQKDIGEILQQIMSISEQSLDEAQAR 64
>sp|P40427|EXD_DROME Homeobox protein extradenticle OS=Drosophila melanogaster GN=exd
PE=1 SV=1
Length = 376
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/226 (83%), Positives = 198/226 (87%), Gaps = 14/226 (6%)
Query: 18 HAIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 77
+AIEHSDYRAKLAQIR IY QELEKYEQAC+EFTTHVMNLLREQSRTRPITPKEIERMVQ
Sbjct: 148 NAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIERMVQ 207
Query: 78 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 137
IIH+KFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS
Sbjct: 208 IIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 267
Query: 138 EEAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSM---- 193
EEAKEELARKC IT+SQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSM
Sbjct: 268 EEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMAGPP 327
Query: 194 -GASTPMMSPAP--DSVGYSKEANLYAAKKAAGASPY--SMGASTP 234
G +TPMMSPAP DS+GY + Y ++ PY SMG P
Sbjct: 328 SGTTTPMMSPAPPQDSMGYPMGSGGYDQQQ-----PYDNSMGGYDP 368
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 25/26 (96%)
Query: 276 RKQDISDILQQILNITDQSLDEAQAR 301
+++DI +ILQQI++I++QSLDEAQAR
Sbjct: 39 KQKDIGEILQQIMSISEQSLDEAQAR 64
>sp|P41778|PBX1_MOUSE Pre-B-cell leukemia transcription factor 1 OS=Mus musculus GN=Pbx1
PE=1 SV=2
Length = 430
Score = 329 bits (844), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 156/190 (82%), Positives = 168/190 (88%)
Query: 19 AIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQI 78
++EHSDYRAKL+QIR IY ELEKYEQAC+EFTTHVMNLLREQSRTRPI+PKEIERMV I
Sbjct: 144 SVEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVSI 203
Query: 79 IHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSE 138
IHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNF+KQA+EILNEYFYSHLSNPYPSE
Sbjct: 204 IHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSE 263
Query: 139 EAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMGASTP 198
EAKEELA+KC IT+SQVSNWFGNKRIRYKKNIGK QEEAN+YAAK A A+ S S
Sbjct: 264 EAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAVTATNVSAHGSQA 323
Query: 199 MMSPAPDSVG 208
P+S G
Sbjct: 324 NSPSTPNSAG 333
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 24/26 (92%)
Query: 276 RKQDISDILQQILNITDQSLDEAQAR 301
RKQDI DILQQI+ ITDQSLDEAQAR
Sbjct: 39 RKQDIGDILQQIMTITDQSLDEAQAR 64
>sp|P40424|PBX1_HUMAN Pre-B-cell leukemia transcription factor 1 OS=Homo sapiens GN=PBX1
PE=1 SV=1
Length = 430
Score = 329 bits (844), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 156/190 (82%), Positives = 168/190 (88%)
Query: 19 AIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQI 78
++EHSDYRAKL+QIR IY ELEKYEQAC+EFTTHVMNLLREQSRTRPI+PKEIERMV I
Sbjct: 144 SVEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVSI 203
Query: 79 IHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSE 138
IHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNF+KQA+EILNEYFYSHLSNPYPSE
Sbjct: 204 IHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSE 263
Query: 139 EAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMGASTP 198
EAKEELA+KC IT+SQVSNWFGNKRIRYKKNIGK QEEAN+YAAK A A+ S S
Sbjct: 264 EAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAVTATNVSAHGSQA 323
Query: 199 MMSPAPDSVG 208
P+S G
Sbjct: 324 NSPSTPNSAG 333
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 24/26 (92%)
Query: 276 RKQDISDILQQILNITDQSLDEAQAR 301
RKQDI DILQQI+ ITDQSLDEAQAR
Sbjct: 39 RKQDIGDILQQIMTITDQSLDEAQAR 64
>sp|Q8QGC4|PBX1_XENLA Pre-B-cell leukemia transcription factor 1 OS=Xenopus laevis
GN=pbx1 PE=1 SV=1
Length = 347
Score = 325 bits (833), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 156/190 (82%), Positives = 167/190 (87%)
Query: 19 AIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQI 78
+ EHSDYRAKL+QIR IY ELEKYEQAC+EFTTHVMNLLREQSRTRPI+PKEIERMV I
Sbjct: 144 STEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVSI 203
Query: 79 IHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSE 138
IHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNF+KQA+EILNEYFYSHLSNPYPSE
Sbjct: 204 IHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSE 263
Query: 139 EAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMGASTP 198
EAKEELA+KC IT+SQVSNWFGNKRIRYKKNIGK QEEAN+YAAK A A+ S+ S
Sbjct: 264 EAKEELAKKCAITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAVNATNVSVHGSQA 323
Query: 199 MMSPAPDSVG 208
P S G
Sbjct: 324 NSPSTPSSAG 333
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 238 PAPDSVGYSSMEDRMHNTNMLPNYIEGANDINTDPQGPRKQDISDILQQILNITDQSLDE 297
P G+ S+ M + GAN+ + RKQDI DILQQI+ ITDQSLDE
Sbjct: 12 PGVGMAGHPSLSQHMQDGT-------GANEGDVG----RKQDIGDILQQIMTITDQSLDE 60
Query: 298 AQAR 301
AQAR
Sbjct: 61 AQAR 64
>sp|B4F6V6|PBX1_XENTR Pre-B-cell leukemia transcription factor 1 OS=Xenopus tropicalis
GN=pbx1 PE=2 SV=1
Length = 347
Score = 325 bits (832), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/188 (82%), Positives = 166/188 (88%)
Query: 21 EHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQIIH 80
EHSDYRAKL+QIR IY ELEKYEQAC+EFTTHVMNLLREQSRTRPI+PKEIERMV IIH
Sbjct: 146 EHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVSIIH 205
Query: 81 RKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEA 140
RKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNF+KQA+EILNEYFYSHLSNPYPSEEA
Sbjct: 206 RKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSEEA 265
Query: 141 KEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMGASTPMM 200
KEELA+KC IT+SQVSNWFGNKRIRYKKNIGK QEEAN+YAAK A A+ S+ S
Sbjct: 266 KEELAKKCAITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAVNATNVSVHGSQANS 325
Query: 201 SPAPDSVG 208
P S G
Sbjct: 326 PSTPSSAG 333
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 11/64 (17%)
Query: 238 PAPDSVGYSSMEDRMHNTNMLPNYIEGANDINTDPQGPRKQDISDILQQILNITDQSLDE 297
P G+ S+ M + GAN+ +G RKQDI DILQQI+ ITDQSLDE
Sbjct: 12 PGVGMAGHPSLSQHMQDGT-------GANE----GEGGRKQDIGDILQQIMTITDQSLDE 60
Query: 298 AQAR 301
AQAR
Sbjct: 61 AQAR 64
>sp|O35317|PBX3_MOUSE Pre-B-cell leukemia transcription factor 3 OS=Mus musculus GN=Pbx3
PE=2 SV=1
Length = 434
Score = 324 bits (831), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 152/166 (91%), Positives = 160/166 (96%)
Query: 18 HAIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 77
++IEHSDYRAKL QIR IY ELEKYEQAC+EFTTHVMNLLREQSRTRPI+PKEIERMV
Sbjct: 145 NSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVG 204
Query: 78 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 137
IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQA+EILNEYFYSHLSNPYPS
Sbjct: 205 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPS 264
Query: 138 EEAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAK 183
EEAKEELA+KC+IT+SQVSNWFGNKRIRYKKNIGK QEEANLYAAK
Sbjct: 265 EEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAK 310
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 246 SSMEDRMHNTNMLPNYIEGANDINTDPQG-------PRKQDISDILQQILNITDQSLDEA 298
S M + N+ + ++G + P G RKQDI DIL QI+ ITDQSLDEA
Sbjct: 5 SRMLQTLAGVNLAGHSVQGGMALPPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEA 64
Query: 299 QAR 301
QA+
Sbjct: 65 QAK 67
>sp|P40426|PBX3_HUMAN Pre-B-cell leukemia transcription factor 3 OS=Homo sapiens GN=PBX3
PE=1 SV=1
Length = 434
Score = 324 bits (831), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 152/166 (91%), Positives = 160/166 (96%)
Query: 18 HAIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 77
++IEHSDYRAKL QIR IY ELEKYEQAC+EFTTHVMNLLREQSRTRPI+PKEIERMV
Sbjct: 145 NSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVG 204
Query: 78 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 137
IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQA+EILNEYFYSHLSNPYPS
Sbjct: 205 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPS 264
Query: 138 EEAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAK 183
EEAKEELA+KC+IT+SQVSNWFGNKRIRYKKNIGK QEEANLYAAK
Sbjct: 265 EEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAK 310
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 246 SSMEDRMHNTNMLPNYIEGANDINTDPQG-------PRKQDISDILQQILNITDQSLDEA 298
S M + N+ + ++G + P G RKQDI DIL QI+ ITDQSLDEA
Sbjct: 5 SRMLQTLAGVNLAGHSVQGGMALPPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEA 64
Query: 299 QAR 301
QA+
Sbjct: 65 QAK 67
>sp|B3DM47|PBX2_XENTR Pre-B-cell leukemia transcription factor 2 OS=Xenopus tropicalis
GN=pbx2 PE=2 SV=1
Length = 422
Score = 323 bits (828), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/202 (78%), Positives = 171/202 (84%), Gaps = 4/202 (1%)
Query: 18 HAIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 77
++IEHSDYR KL+QIR IY ELEKYEQAC+EFTTHVMNLLREQSRTRPI+PKEIERMV
Sbjct: 147 NSIEHSDYRNKLSQIRQIYHAELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVG 206
Query: 78 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 137
IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQA+E+LNEYFYSHLSNPYPS
Sbjct: 207 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPS 266
Query: 138 EEAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAG-ASPYSMGAS 196
EEAKEELA+KC IT+SQVSNWFGNKRIRYKKNIGK QEEAN+YA K A A GA+
Sbjct: 267 EEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVAQGGHSGAN 326
Query: 197 TPMMSPAPDSVGYSKEANLYAA 218
+P P S G NL +
Sbjct: 327 SPT---TPTSAGSGGSFNLSGS 345
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 275 PRKQDISDILQQILNITDQSLDEAQAR 301
PRKQDI DILQQI+ ITDQSLDEAQA+
Sbjct: 42 PRKQDIGDILQQIMTITDQSLDEAQAK 68
>sp|O35984|PBX2_MOUSE Pre-B-cell leukemia transcription factor 2 OS=Mus musculus GN=Pbx2
PE=1 SV=1
Length = 430
Score = 323 bits (827), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 159/218 (72%), Positives = 174/218 (79%), Gaps = 4/218 (1%)
Query: 18 HAIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 77
++IEHSDYR+KLAQIR IY ELEKYEQAC+EFTTHVMNLLREQSRTRP+ PKE+ERMV
Sbjct: 154 NSIEHSDYRSKLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVS 213
Query: 78 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 137
IIHRKFS+IQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQA+E+LNEYFYSHLSNPYPS
Sbjct: 214 IIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPS 273
Query: 138 EEAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMGAST 197
EEAKEELA+KC IT+SQVSNWFGNKRIRYKKNIGK QEEAN+YA K A + G +
Sbjct: 274 EEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSV---AQGGHS 330
Query: 198 PMMSPA-PDSVGYSKEANLYAAKKAAGASPYSMGASTP 234
SP P S G NL + P G S P
Sbjct: 331 RTSSPTPPSSAGSGGSFNLSGSGDMFLGMPGLNGDSYP 368
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 277 KQDISDILQQILNITDQSLDEAQAR 301
KQDI DILQQI+ ITDQSLDEAQA+
Sbjct: 50 KQDIGDILQQIMTITDQSLDEAQAK 74
>sp|P40425|PBX2_HUMAN Pre-B-cell leukemia transcription factor 2 OS=Homo sapiens GN=PBX2
PE=1 SV=2
Length = 430
Score = 322 bits (826), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/202 (76%), Positives = 170/202 (84%), Gaps = 4/202 (1%)
Query: 18 HAIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 77
++IEHSDYR+KLAQIR IY ELEKYEQAC+EFTTHVMNLLREQSRTRP+ PKE+ERMV
Sbjct: 154 NSIEHSDYRSKLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVS 213
Query: 78 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 137
IIHRKFS+IQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQA+E+LNEYFYSHLSNPYPS
Sbjct: 214 IIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPS 273
Query: 138 EEAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMGAST 197
EEAKEELA+KC IT+SQVSNWFGNKRIRYKKNIGK QEEAN+YA K A + G +
Sbjct: 274 EEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSV---TQGGHS 330
Query: 198 PMMSPA-PDSVGYSKEANLYAA 218
SP P S G NL +
Sbjct: 331 RTSSPTPPSSAGSGGSFNLSGS 352
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/25 (84%), Positives = 23/25 (92%)
Query: 277 KQDISDILQQILNITDQSLDEAQAR 301
KQDI DILQQI+ ITDQSLDEAQA+
Sbjct: 50 KQDIGDILQQIMTITDQSLDEAQAK 74
>sp|Q6IR52|PBX2_XENLA Pre-B-cell leukemia transcription factor 2 OS=Xenopus laevis
GN=pbx2 PE=2 SV=1
Length = 445
Score = 321 bits (823), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/202 (77%), Positives = 172/202 (85%), Gaps = 4/202 (1%)
Query: 18 HAIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 77
++IEHSDYR KL+QIR IY ELEKYEQAC+EFTTHVMNLLREQSRTRPI+PKEIERMV
Sbjct: 147 NSIEHSDYRNKLSQIRQIYHAELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVG 206
Query: 78 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 137
IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQA+E+LNEYFYSHLSNPYPS
Sbjct: 207 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPS 266
Query: 138 EEAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSM-GAS 196
EEAKEELA+KC+IT+SQVSNWFGNKRIRYKKNIGK QEEAN+YA K A + GA+
Sbjct: 267 EEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVTQGGHSGAN 326
Query: 197 TPMMSPAPDSVGYSKEANLYAA 218
+P P S G NL +
Sbjct: 327 SPT---TPTSAGSGGSFNLSGS 345
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 27/32 (84%)
Query: 270 TDPQGPRKQDISDILQQILNITDQSLDEAQAR 301
TD PRKQDI DILQQI+ ITDQSLDEAQA+
Sbjct: 37 TDNGEPRKQDIGDILQQIMTITDQSLDEAQAK 68
>sp|Q9BYU1|PBX4_HUMAN Pre-B-cell leukemia transcription factor 4 OS=Homo sapiens GN=PBX4
PE=2 SV=2
Length = 374
Score = 293 bits (749), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 136/168 (80%), Positives = 150/168 (89%)
Query: 18 HAIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 77
++IEHSDYRAKL+QIR IY ELEKYEQAC EFTTHV NLL+EQSR RP++PKEIERMV
Sbjct: 120 NSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERMVG 179
Query: 78 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 137
IH KFS+IQMQLKQSTCEAVM LRSR LDARRKRRNFSKQA+E+LNEYFYSHL+NPYPS
Sbjct: 180 AIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPS 239
Query: 138 EEAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKA 185
EEAKEELARK +T+SQVSNWFGNKRIRYKKN+GK QEEA +Y K A
Sbjct: 240 EEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTA 287
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/23 (82%), Positives = 21/23 (91%)
Query: 279 DISDILQQILNITDQSLDEAQAR 301
D SD+LQQI+ ITDQSLDEAQAR
Sbjct: 18 DTSDVLQQIMAITDQSLDEAQAR 40
>sp|Q99NE9|PBX4_MOUSE Pre-B-cell leukemia transcription factor 4 OS=Mus musculus GN=Pbx4
PE=2 SV=2
Length = 378
Score = 282 bits (722), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/192 (70%), Positives = 154/192 (80%), Gaps = 1/192 (0%)
Query: 18 HAIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQ 77
++IEHSDYRAKL+QIR IY ELEKYEQAC EFTTHV NLLREQSR RP++ +E+E MV
Sbjct: 125 NSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLREQSRVRPVSCREMEHMVN 184
Query: 78 IIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPS 137
I KFS+IQ QLKQSTCEAVM LRSRFLDARRKRRNFSKQA+++LNEYFYSHLSNPYPS
Sbjct: 185 TIQSKFSAIQRQLKQSTCEAVMTLRSRFLDARRKRRNFSKQATDVLNEYFYSHLSNPYPS 244
Query: 138 EEAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKA-AGASPYSMGAS 196
EE KEELARK IT+SQVSNWFGNKRIRYKKN GK QEEA +Y K + + G S
Sbjct: 245 EETKEELARKGGITVSQVSNWFGNKRIRYKKNTGKFQEEATMYTGKASTVTKARRPRGQS 304
Query: 197 TPMMSPAPDSVG 208
+ +P+P G
Sbjct: 305 SCQSTPSPGPCG 316
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 22/27 (81%)
Query: 275 PRKQDISDILQQILNITDQSLDEAQAR 301
P D SD+LQQI+ ITDQSLDEAQAR
Sbjct: 22 PLGHDTSDVLQQIMAITDQSLDEAQAR 48
>sp|P41779|HM20_CAEEL Homeobox protein ceh-20 OS=Caenorhabditis elegans GN=ceh-20 PE=2
SV=1
Length = 338
Score = 281 bits (718), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 132/182 (72%), Positives = 154/182 (84%)
Query: 21 EHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQIIH 80
+ +DYR KL QIR +Y +EL KYE+AC+EFT HV +LL++QS+ RPI KEIERMV II
Sbjct: 101 DQADYRQKLHQIRVLYNEELRKYEEACNEFTQHVRSLLKDQSQVRPIAHKEIERMVYIIQ 160
Query: 81 RKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEA 140
RKF+ IQ+QLKQSTCEAVMILRSRFLDARRKRRNFSKQA+E+LNEYFY HLSNPYPSEEA
Sbjct: 161 RKFNGIQVQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYGHLSNPYPSEEA 220
Query: 141 KEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGASPYSMGASTPMM 200
KE+LAR+CNIT+SQVSNWFGNKRIRYKKN+ KAQEEA++YAAKK A + M + M
Sbjct: 221 KEDLARQCNITVSQVSNWFGNKRIRYKKNMAKAQEEASMYAAKKNAHVTLGGMAGNPYGM 280
Query: 201 SP 202
P
Sbjct: 281 LP 282
>sp|Q19503|HM40_CAEEL Homeobox protein ceh-40 OS=Caenorhabditis elegans GN=ceh-40 PE=1
SV=1
Length = 329
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 114/158 (72%)
Query: 19 AIEHSDYRAKLAQIRTIYQQELEKYEQACSEFTTHVMNLLREQSRTRPITPKEIERMVQI 78
+ +YR +L ++R + E + +++ C ++ +V ++L++Q RPIT + E+ +
Sbjct: 98 GTDQYEYRQQLLKVRRELENETKAFDKHCKKWCEYVEDVLQQQGEFRPITQQSTEKFMNK 157
Query: 79 IHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSE 138
+ KF+ + LKQ+ CE V+ L+ R+LDARRKRRNFSK ++EILNEYF +++++PYPSE
Sbjct: 158 MSGKFNKVCFVLKQTACEEVIQLKKRYLDARRKRRNFSKTSTEILNEYFLANINHPYPSE 217
Query: 139 EAKEELARKCNITLSQVSNWFGNKRIRYKKNIGKAQEE 176
E K+ LA +CNI+++QVSNWFGNKRIRYKK + K ++E
Sbjct: 218 EVKQALAMQCNISVAQVSNWFGNKRIRYKKTMAKNEDE 255
>sp|Q5R6L1|PKNX2_PONAB Homeobox protein PKNOX2 OS=Pongo abelii GN=PKNOX2 PE=2 SV=1
Length = 472
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 84 SSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEE 143
+IQ+Q Q + +L + ++ KR K A+ I+ + + HL +PYP+E+ K +
Sbjct: 264 GAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQ 323
Query: 144 LARKCNITLSQVSNWFGNKRIR 165
+A + N+TL QV+NWF N R R
Sbjct: 324 IAAQTNLTLLQVNNWFVNARRR 345
>sp|Q8BG99|PKNX2_MOUSE Homeobox protein PKNOX2 OS=Mus musculus GN=Pknox2 PE=2 SV=1
Length = 474
Score = 64.3 bits (155), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 84 SSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEE 143
+IQ+Q Q + +L + ++ KR K A+ I+ + + HL +PYP+E+ K +
Sbjct: 264 GAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQ 323
Query: 144 LARKCNITLSQVSNWFGNKRIR 165
+A + N+TL QV+NWF N R R
Sbjct: 324 IAAQTNLTLLQVNNWFINARRR 345
>sp|Q96KN3|PKNX2_HUMAN Homeobox protein PKNOX2 OS=Homo sapiens GN=PKNOX2 PE=1 SV=2
Length = 472
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 85 SIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEEL 144
+IQ+Q Q + +L + ++ KR K A+ I+ + + HL +PYP+E+ K ++
Sbjct: 265 AIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQI 324
Query: 145 ARKCNITLSQVSNWFGNKRIR 165
A + N+TL QV+NWF N R R
Sbjct: 325 AAQTNLTLLQVNNWFINARRR 345
>sp|Q54F11|HBX3_DICDI Homeobox protein 3 OS=Dictyostelium discoideum GN=hbx3 PE=2 SV=1
Length = 667
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%)
Query: 71 EIERMVQIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSH 130
E+ + ++ F+ ++ K +T ++ + ++ + RR S+Q +N +F +H
Sbjct: 565 ELNSKLNMVQSVFNVVKSYQKTNTANVILQVLKKYAKEFKSRRILSEQQETNMNLWFDAH 624
Query: 131 LSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIRYKKN 169
++NPYP E+ K L N++ SQ+ NWFGNKR+R K N
Sbjct: 625 VNNPYPEEDEKVILGAVNNLSKSQIDNWFGNKRMRDKSN 663
>sp|Q6DIF3|MEIS3_XENTR Homeobox protein meis3 OS=Xenopus tropicalis GN=meis3 PE=2 SV=2
Length = 453
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 110 RKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIRYKKN 169
+KR F K A+ I+ + + HLS+PYPSEE K++LA+ +T+ QV+NWF N R R +
Sbjct: 269 KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 328
Query: 170 IGKAQEEANLYAAKKAAGASPYS 192
+ +++N + G +PYS
Sbjct: 329 M---IDQSN----RTGQGGAPYS 344
>sp|Q5U4X3|MEI3A_XENLA Homeobox protein meis3-A OS=Xenopus laevis GN=meis3-a PE=2 SV=1
Length = 453
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 110 RKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIRYKKN 169
+KR F K A+ I+ + + HLS+PYPSEE K++LA+ +T+ QV+NWF N R R +
Sbjct: 269 KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 328
Query: 170 IGKAQEEANLYAAKKAAGASPYS 192
+ +++N + G +PYS
Sbjct: 329 M---IDQSN----RTGQGGAPYS 344
>sp|Q7ZY13|MEI3B_XENLA Homeobox protein meis3-B OS=Xenopus laevis GN=meis3-b PE=2 SV=2
Length = 451
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Query: 110 RKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIRYKKN 169
+KR F K A+ I+ + + HLS+PYPSEE K++LA+ +T+ QV+NWF N R R +
Sbjct: 269 KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 328
Query: 170 IGKAQEEANLYAAKKAAGASPYS 192
+ +++N + G +PYS
Sbjct: 329 M---IDQSN----RTGQGGAPYS 344
>sp|Q99687|MEIS3_HUMAN Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3
Length = 375
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 110 RKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
+KR F K A+ I+ + + HLS+PYPSEE K++LA+ +T+ QV+NWF N R R
Sbjct: 264 KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 319
>sp|P97368|MEIS3_MOUSE Homeobox protein Meis3 OS=Mus musculus GN=Meis3 PE=2 SV=2
Length = 378
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 110 RKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
+KR F K A+ I+ + + HLS+PYPSEE K++LA+ +T+ QV+NWF N R R
Sbjct: 267 KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 322
>sp|O46339|HTH_DROME Homeobox protein homothorax OS=Drosophila melanogaster GN=hth PE=1
SV=1
Length = 487
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 109 RRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
++KR F K A+ IL + + HL++PYPSE+ K++LA+ +T+ QV+NWF N R R
Sbjct: 366 QKKRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRR 422
>sp|A6NDR6|ME3L1_HUMAN Putative homeobox protein Meis3-like 1 OS=Homo sapiens GN=MEIS3P1
PE=5 SV=2
Length = 274
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 110 RKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
+KR F K A+ I+ + + HLS+PYPSEE K++LA+ +T+ QV+NWF N R R
Sbjct: 163 KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 218
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
PE=1 SV=2
Length = 383
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 66 PITPKEIERMVQIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNE 125
P+ P E ER ++ R ++ +LKQ E ++ +R + RR + + +L E
Sbjct: 264 PLVPTERER--SLMERVKKELKHELKQGFKEKIVDIREEIMRKRRAGK-LPGDTTSVLKE 320
Query: 126 YFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
++ +H PYP+EE K +L ++ + L Q++NWF N+R R
Sbjct: 321 WWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKR 360
>sp|O70477|PKNX1_MOUSE Homeobox protein PKNOX1 OS=Mus musculus GN=Pknox1 PE=2 SV=3
Length = 436
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 100 ILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWF 159
IL ++ KR K A+ ++ + + H+ +PYP+E+ K+++A + N+TL QV+NWF
Sbjct: 251 ILHQEDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWF 310
Query: 160 GNKRIR 165
N R R
Sbjct: 311 INARRR 316
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
PE=1 SV=1
Length = 431
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 66 PITPKEIERMVQIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNE 125
P+ P E ER ++ R ++ +LKQ E ++ +R L RR + + +L
Sbjct: 305 PLIPTESER--SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGK-LPGDTTSVLKA 361
Query: 126 YFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
++ SH PYP+EE K L ++ + L Q++NWF N+R R
Sbjct: 362 WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 401
>sp|Q2HJ84|PKNX1_BOVIN Homeobox protein PKNOX1 OS=Bos taurus GN=PKNOX1 PE=2 SV=1
Length = 436
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 100 ILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWF 159
IL ++ KR K A+ ++ + + H+ +PYP+E+ K+++A + N+TL QV+NWF
Sbjct: 251 ILHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWF 310
Query: 160 GNKRIR 165
N R R
Sbjct: 311 INARRR 316
>sp|Q93348|IRX_CAEEL Putative iroquois-class homeodomain protein irx-1 OS=Caenorhabditis
elegans GN=irx-1 PE=3 SV=3
Length = 377
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 111 KRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIRYKK 168
K+RN +++A+ L ++ +SH NPYPS+ K LA +TL+QVS WF N R R KK
Sbjct: 118 KKRNATREATAPLKDWLHSHRKNPYPSKADKVMLAVGTGMTLTQVSTWFANARRRLKK 175
>sp|P55347|PKNX1_HUMAN Homeobox protein PKNOX1 OS=Homo sapiens GN=PKNOX1 PE=1 SV=3
Length = 436
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 100 ILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWF 159
IL ++ KR K A+ ++ + + H+ +PYP+E+ K+++A + N+TL QV+NWF
Sbjct: 251 ILHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWF 310
Query: 160 GNKRIR 165
N R R
Sbjct: 311 INARRR 316
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
GN=LET12 PE=2 SV=1
Length = 426
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 66 PITPKEIERMVQIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNE 125
P+ P E ER ++ R ++ +LKQ E ++ +R L RR + + +L
Sbjct: 310 PLVPTESER--SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGK-LPGDTTSVLKA 366
Query: 126 YFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
++ SH PYP+EE K L ++ + L Q++NWF N+R R
Sbjct: 367 WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 406
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
PE=2 SV=3
Length = 393
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 66 PITPKEIERMVQIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNE 125
P+ P E ER ++ R ++ +LKQ E ++ +R L RR + + +L
Sbjct: 269 PLVPTESER--SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGK-LPGDTTSVLKS 325
Query: 126 YFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
++ SH PYP+EE K L ++ + L Q++NWF N+R R
Sbjct: 326 WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 365
>sp|P97367|MEIS2_MOUSE Homeobox protein Meis2 OS=Mus musculus GN=Meis2 PE=1 SV=2
Length = 477
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 112 RRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
R F K A+ I+ + + HL++PYPSEE K++LA+ +T+ QV+NWF N R R
Sbjct: 280 RGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333
>sp|O14770|MEIS2_HUMAN Homeobox protein Meis2 OS=Homo sapiens GN=MEIS2 PE=1 SV=2
Length = 477
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 112 RRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
R F K A+ I+ + + HL++PYPSEE K++LA+ +T+ QV+NWF N R R
Sbjct: 280 RGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 333
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
Length = 427
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 66 PITPKEIERMVQIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNE 125
P+ P E ER ++ R ++ +LKQ E ++ +R L RR + + +L
Sbjct: 313 PLIPTESER--SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGK-LPGDTTSVLKA 369
Query: 126 YFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
++ SH PYP+EE K L ++ + L Q++NWF N+R R
Sbjct: 370 WWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 409
>sp|P79937|MEIS1_XENLA Homeobox protein Meis1 OS=Xenopus laevis GN=meis1 PE=1 SV=1
Length = 390
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 109 RRKRRN-FSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
R K R F K A+ I+ + + HL++PYPSEE K++LA+ +T+ QV+NWF N R R
Sbjct: 272 RNKGRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
>sp|P53147|TOS8_YEAST Homeobox protein TOS8 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TOS8 PE=3 SV=1
Length = 276
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 108 ARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIRYK 167
A KR N K ILN++ + H++NPYP+ + K EL K +T Q+SNWF N R +
Sbjct: 194 AHGKRSNLPKATVSILNKWLHEHVNNPYPTVQEKRELLAKTGLTKLQISNWFINAR---R 250
Query: 168 KNIGKAQEEANLYAAK 183
+ I Q +AN + K
Sbjct: 251 RKIFSGQNDANNFRRK 266
>sp|O00470|MEIS1_HUMAN Homeobox protein Meis1 OS=Homo sapiens GN=MEIS1 PE=1 SV=1
Length = 390
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 112 RRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
R F K A+ I+ + + HL++PYPSEE K++LA+ +T+ QV+NWF N R R
Sbjct: 276 RGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
>sp|Q60954|MEIS1_MOUSE Homeobox protein Meis1 OS=Mus musculus GN=Meis1 PE=1 SV=1
Length = 390
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 112 RRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
R F K A+ I+ + + HL++PYPSEE K++LA+ +T+ QV+NWF N R R
Sbjct: 276 RGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 329
>sp|A8K0S8|ME3L2_HUMAN Putative homeobox protein Meis3-like 2 OS=Homo sapiens GN=MEIS3P2
PE=2 SV=1
Length = 358
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 110 RKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
+KR F K A+ I+ + + HL +PYPSEE K++L + +T+ QV+NWF N R R
Sbjct: 247 KKRGIFPKVATNIMRAWLFQHLWHPYPSEEQKKQLVQDTGLTILQVNNWFINARRR 302
>sp|Q9GZN2|TGIF2_HUMAN Homeobox protein TGIF2 OS=Homo sapiens GN=TGIF2 PE=1 SV=1
Length = 237
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 13/147 (8%)
Query: 106 LDARRKRR-NFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRI 164
L +RKRR N K++ +IL ++ Y H N YPSE+ K L+ + N+++ Q+ NWF N R
Sbjct: 15 LAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARR 74
Query: 165 RYKKN-IGKAQEEANLYAAKKAAG-ASPYSM--GASTPMMS---PAPDSVGYSKEAN--L 215
R + + K ++ N + + G AS ++ G+S +++ PAP +V + L
Sbjct: 75 RLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPSVLAVSVPAPTNVLSLSVCSMPL 134
Query: 216 YAAKKAAGASPYSMG---ASTPMMSPA 239
++ + A+P+ G + P+++P
Sbjct: 135 HSGQGEKPAAPFPRGELESPKPLVTPG 161
>sp|Q94KL5|BLH4_ARATH BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4
PE=2 SV=2
Length = 627
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 107 DARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIRY 166
+A R +R +++ IL + + H NPYPS+ K LAR+ ++ +QVSNWF N R+R
Sbjct: 423 EAWRPQRGLPERSVNILRAWLFEHFLNPYPSDADKHLLARQTGLSRNQVSNWFINARVRL 482
Query: 167 KK 168
K
Sbjct: 483 WK 484
>sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana GN=BLH1
PE=1 SV=1
Length = 680
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 107 DARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIRY 166
+A R +R ++A +L + + H +PYP + K LA++ +T SQVSNWF N R+R
Sbjct: 384 NAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRL 443
Query: 167 KK 168
K
Sbjct: 444 WK 445
>sp|Q90655|AKR_CHICK Homeobox protein AKR OS=Gallus gallus PE=2 SV=1
Length = 269
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 109 RRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIR 165
RR+R N K++ +IL ++ Y H N YPSE+ K L+R+ +++ QV NWF N R R
Sbjct: 36 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKVLLSRQTHLSTLQVCNWFINARRR 92
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
PE=2 SV=1
Length = 291
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 15/110 (13%)
Query: 66 PITPKEIERMVQIIHRKFSSIQMQLKQSTCEAVMILRSRFLDAR----RKRR--NFSKQA 119
P+ P E ER ++ R ++++LKQ +SR D R RKRR
Sbjct: 177 PLLPTESER--SLMERVRQELKLELKQG-------FKSRIEDVREEIMRKRRAGKLPGDT 227
Query: 120 SEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIRYKKN 169
+ +L ++ H PYP+E+ K +L + + L Q++NWF N+R R N
Sbjct: 228 TTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHN 277
>sp|Q8S897|BLH5_ARATH BEL1-like homeodomain protein 5 OS=Arabidopsis thaliana GN=BLH5
PE=2 SV=2
Length = 431
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 107 DARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCNITLSQVSNWFGNKRIRY 166
+A R +R ++A +L + + H +PYP + K LA++ +T SQVSNWF N R+R
Sbjct: 227 NAWRPQRGLPEKAVSVLRSWLFEHFLHPYPRDLDKVMLAKQTGLTKSQVSNWFINARVRM 286
Query: 167 KK-----------NIGKAQEEANLYAAKKAAGASPYS 192
K +I ++++ ++ Y+ K ++ PY+
Sbjct: 287 WKPLVEELYSEEMDIEESRKGSDRYSTKGSSSKQPYN 323
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.127 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,186,041
Number of Sequences: 539616
Number of extensions: 3895965
Number of successful extensions: 17277
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 476
Number of HSP's that attempted gapping in prelim test: 16324
Number of HSP's gapped (non-prelim): 1380
length of query: 301
length of database: 191,569,459
effective HSP length: 117
effective length of query: 184
effective length of database: 128,434,387
effective search space: 23631927208
effective search space used: 23631927208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)