BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5542
(86 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B8DG08|SYP_LISMH Proline--tRNA ligase OS=Listeria monocytogenes serotype 4a (strain
HCC23) GN=proS PE=3 SV=1
Length = 568
Score = 92.4 bits (228), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 60/86 (69%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
++ D S+K LPL LYQ +KFRDE RP+FGL+R REF+MKD Y+F A+ ++VYNL
Sbjct: 117 LLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNL 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y ++F G+++R VI G++
Sbjct: 177 MHQAYSNIFTRCGLEFRSVIADSGSI 202
>sp|Q8Y7G2|SYP_LISMO Proline--tRNA ligase OS=Listeria monocytogenes serovar 1/2a (strain
ATCC BAA-679 / EGD-e) GN=proS PE=3 SV=1
Length = 568
Score = 92.0 bits (227), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 60/86 (69%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
++ D S+K LPL LYQ +KFRDE RP+FGL+R REF+MKD Y+F A+ ++VYNL
Sbjct: 117 LLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNL 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y ++F G+++R VI G++
Sbjct: 177 MHQAYSNIFTRCGLEFRSVIADSGSI 202
>sp|Q720A3|SYP_LISMF Proline--tRNA ligase OS=Listeria monocytogenes serotype 4b (strain
F2365) GN=proS PE=3 SV=1
Length = 568
Score = 92.0 bits (227), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 60/86 (69%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
++ D S+K LPL LYQ +KFRDE RP+FGL+R REF+MKD Y+F A+ ++VYNL
Sbjct: 117 LLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNL 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y ++F G+++R VI G++
Sbjct: 177 MHQAYSNIFTRCGLEFRSVIADSGSI 202
>sp|C1L2M5|SYP_LISMC Proline--tRNA ligase OS=Listeria monocytogenes serotype 4b (strain
CLIP80459) GN=proS PE=3 SV=1
Length = 568
Score = 92.0 bits (227), Expect = 9e-19, Method: Composition-based stats.
Identities = 40/86 (46%), Positives = 60/86 (69%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
++ D S+K LPL LYQ +KFRDE RP+FGL+R REF+MKD Y+F A+ ++VYNL
Sbjct: 117 LLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYNL 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y ++F G+++R VI G++
Sbjct: 177 MHQAYSNIFTRCGLEFRSVIADSGSI 202
>sp|Q04F81|SYP_OENOB Proline--tRNA ligase OS=Oenococcus oeni (strain ATCC BAA-331 /
PSU-1) GN=proS PE=3 SV=1
Length = 570
Score = 92.0 bits (227), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 61/86 (70%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+++D S+K LPL+LYQ KFRDELRPK GL+R REF+MKD Y+F++ + +D Y+L
Sbjct: 117 IISDEIKSYKKLPLILYQIQQKFRDELRPKNGLLRGREFIMKDAYSFSSDQKGLDDAYDL 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ Y +F+ +G+ YR++I G++
Sbjct: 177 IESAYKRIFDRVGLDYREIIADSGSM 202
>sp|B9IVA8|SYP_BACCQ Proline--tRNA ligase OS=Bacillus cereus (strain Q1) GN=proS PE=3
SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|B7HLF2|SYP_BACC7 Proline--tRNA ligase OS=Bacillus cereus (strain AH187) GN=proS PE=3
SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|Q732Q0|SYP1_BACC1 Proline--tRNA ligase 1 OS=Bacillus cereus (strain ATCC 10987)
GN=proS1 PE=3 SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|C1EP43|SYP_BACC3 Proline--tRNA ligase OS=Bacillus cereus (strain 03BB102) GN=proS
PE=3 SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|B7JJ97|SYP_BACC0 Proline--tRNA ligase OS=Bacillus cereus (strain AH820) GN=proS PE=3
SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|C3L7A8|SYP_BACAC Proline--tRNA ligase OS=Bacillus anthracis (strain CDC 684 / NRRL
3495) GN=proS PE=3 SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|C3P5M1|SYP_BACAA Proline--tRNA ligase OS=Bacillus anthracis (strain A0248) GN=proS
PE=3 SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|Q819Y4|SYP1_BACCR Proline--tRNA ligase 1 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=proS1 PE=3 SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|Q81WL6|SYP1_BACAN Proline--tRNA ligase 1 OS=Bacillus anthracis GN=proS1 PE=3 SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|A0RHJ2|SYP1_BACAH Proline--tRNA ligase 1 OS=Bacillus thuringiensis (strain Al Hakam)
GN=proS1 PE=3 SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|Q6HEZ6|SYP1_BACHK Proline--tRNA ligase 1 OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=proS1 PE=3 SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|Q636K7|SYP1_BACCZ Proline--tRNA ligase 1 OS=Bacillus cereus (strain ZK / E33L)
GN=proS1 PE=3 SV=1
Length = 566
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|Q5M7W7|SYPM_RAT Probable proline--tRNA ligase, mitochondrial OS=Rattus norvegicus
GN=Pars2 PE=2 SV=1
Length = 475
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 56/81 (69%)
Query: 6 KLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCY 65
KLS+K LPLLLYQ T KFRDE RP+FGL+R REF MKD+Y F +S A + Y+LV Y
Sbjct: 171 KLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQETYSLVCDAY 230
Query: 66 DDVFNTLGIKYRKVIVRHGAV 86
+F+ LG+++ K G++
Sbjct: 231 CRLFDRLGLRWMKARADVGSI 251
>sp|Q7L3T8|SYPM_HUMAN Probable proline--tRNA ligase, mitochondrial OS=Homo sapiens
GN=PARS2 PE=1 SV=1
Length = 475
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 55/86 (63%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+ + KLS+K LP LLYQ T KFRDE RP+FGL+R REF MKD+Y F +S A Y+L
Sbjct: 166 IASQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSPEAAQQTYSL 225
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
V Y +FN LG+ + KV G +
Sbjct: 226 VCDAYCSLFNKLGLPFVKVQADVGTI 251
>sp|A8FDC1|SYP_BACP2 Proline--tRNA ligase OS=Bacillus pumilus (strain SAFR-032) GN=proS
PE=3 SV=1
Length = 565
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL LYQ SKFRDE RP+FGL+R REF+MKD Y+F +S +D YN + Y +
Sbjct: 124 SYKKLPLTLYQIQSKFRDEQRPRFGLLRGREFIMKDAYSFHSSPESLDDTYNKMFTAYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
VF+ +G+ +R VI GA+
Sbjct: 184 VFSKVGLNFRPVIADSGAM 202
>sp|B1HQZ9|SYP_LYSSC Proline--tRNA ligase OS=Lysinibacillus sphaericus (strain C3-41)
GN=proS PE=3 SV=1
Length = 568
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REF+MKD Y+F AS ++ Y+
Sbjct: 117 LVRDEIKSYKKLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHASRESLDETYDD 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y ++F+ LG+ YR VI G++
Sbjct: 177 MYRAYSNIFSRLGLNYRAVIADAGSI 202
>sp|A9VT57|SYP_BACWK Proline--tRNA ligase OS=Bacillus weihenstephanensis (strain KBAB4)
GN=proS PE=3 SV=1
Length = 566
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYSG 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|Q8CFI5|SYPM_MOUSE Probable proline--tRNA ligase, mitochondrial OS=Mus musculus
GN=Pars2 PE=2 SV=2
Length = 475
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 55/81 (67%)
Query: 6 KLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCY 65
KLS+K LPLLLYQ T KFRDE RP+FGL+R REF MKD+Y F +S A + Y LV Y
Sbjct: 171 KLSYKQLPLLLYQVTRKFRDEPRPRFGLLRGREFYMKDMYTFDSSSEAAQETYGLVCDAY 230
Query: 66 DDVFNTLGIKYRKVIVRHGAV 86
+F+ LG+++ K G++
Sbjct: 231 CRLFDRLGLQWMKARADVGSI 251
>sp|A0AIC0|SYP_LISW6 Proline--tRNA ligase OS=Listeria welshimeri serovar 6b (strain ATCC
35897 / DSM 20650 / SLCC5334) GN=proS PE=3 SV=1
Length = 568
Score = 90.1 bits (222), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
++ D S+K LPL LYQ +KFRDE RP+FGL+R REF+MKD Y+F A+ ++VY L
Sbjct: 117 LLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHATSESLDEVYKL 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y ++F G+++R VI G++
Sbjct: 177 MHQAYSNIFTRCGLEFRSVIADSGSI 202
>sp|B7HDU2|SYP_BACC4 Proline--tRNA ligase OS=Bacillus cereus (strain B4264) GN=proS PE=3
SV=1
Length = 566
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEVKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|A5UDZ4|SYP_HAEIE Proline--tRNA ligase OS=Haemophilus influenzae (strain PittEE)
GN=proS PE=3 SV=1
Length = 572
Score = 90.1 bits (222), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 57/79 (72%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL LYQ +KFRDE+RP+FG+MRSREF+MKD Y+F ++ + Y+++ + Y +
Sbjct: 124 SYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQETYDVMYQVYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
+FN LG+ +R V G++
Sbjct: 184 IFNRLGLDFRAVQADTGSI 202
>sp|B7IUH7|SYP_BACC2 Proline--tRNA ligase OS=Bacillus cereus (strain G9842) GN=proS PE=3
SV=1
Length = 566
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F G+ +R VI GA+
Sbjct: 177 LYKAYSNIFARCGLNFRAVIADSGAM 202
>sp|C5BPN9|SYP_TERTT Proline--tRNA ligase OS=Teredinibacter turnerae (strain ATCC 39867
/ T7901) GN=proS PE=3 SV=1
Length = 574
Score = 89.7 bits (221), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 58/79 (73%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL YQ +KFRDE+RP+FG+MR+REFLMKD Y+F S+ + Y+++ + Y +
Sbjct: 124 SYKQLPLNFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHISQESLQETYDVMHRTYCN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
+F+ +G++YR V+ G++
Sbjct: 184 IFDRIGLQYRPVLADTGSI 202
>sp|A5VZT5|SYP_PSEP1 Proline--tRNA ligase OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=proS PE=3 SV=1
Length = 571
Score = 89.4 bits (220), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL LYQ +KFRDE+RP+FGLMR REF+MKD Y+F A + + Y+ + + Y +
Sbjct: 124 SYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQAYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
VF LG+ +R V G++
Sbjct: 184 VFTRLGLDFRPVQADTGSI 202
>sp|Q88NK2|SYP_PSEPK Proline--tRNA ligase OS=Pseudomonas putida (strain KT2440) GN=proS
PE=3 SV=1
Length = 571
Score = 89.4 bits (220), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL LYQ +KFRDE+RP+FGLMR REF+MKD Y+F A + + Y+ + + Y +
Sbjct: 124 SYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQAYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
VF LG+ +R V G++
Sbjct: 184 VFTRLGLDFRPVQADTGSI 202
>sp|A8ERT9|SYP_ARCB4 Proline--tRNA ligase OS=Arcobacter butzleri (strain RM4018) GN=proS
PE=3 SV=1
Length = 568
Score = 89.0 bits (219), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 56/86 (65%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
MV + S+K LPL LYQ +KFRDE RP+FGLMR REFLMKD Y+F +SE D +NL
Sbjct: 117 MVKNRITSYKDLPLHLYQINTKFRDEARPRFGLMRGREFLMKDGYSFHSSEEDLVREFNL 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ Y ++ LG+ +R V GA+
Sbjct: 177 METTYKKIYTKLGLDFRVVAADSGAI 202
>sp|Q4KH98|SYP_PSEF5 Proline--tRNA ligase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477) GN=proS PE=3 SV=1
Length = 571
Score = 89.0 bits (219), Expect = 8e-18, Method: Composition-based stats.
Identities = 39/79 (49%), Positives = 55/79 (69%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL LYQ +KFRDE+RP+FGLMR REF+MKD Y+F A + Y+ + + Y +
Sbjct: 124 SYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQVTYDRMHQAYCN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
VF LG+K+R V +G++
Sbjct: 184 VFTRLGLKFRPVEADNGSI 202
>sp|Q03QS8|SYP_LACBA Proline--tRNA ligase OS=Lactobacillus brevis (strain ATCC 367 / JCM
1170) GN=proS PE=3 SV=1
Length = 569
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 62/86 (72%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL++YQ K+RDE RP++GL+R REF+MKD Y+F+ S+ D + +YN
Sbjct: 117 LVRDAIKSYKRLPLVMYQIQPKYRDEDRPRYGLLRGREFIMKDAYSFSLSDEDLDRIYNQ 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y+++F+ +G+ YR ++ GA+
Sbjct: 177 MEQAYENIFDRIGLNYRAIVGDGGAM 202
>sp|P43830|SYP_HAEIN Proline--tRNA ligase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=proS PE=1 SV=1
Length = 572
Score = 89.0 bits (219), Expect = 9e-18, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 56/79 (70%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL LYQ +KFRDE+RP+FG+MRSREF+MKD Y+F ++ Y+++ + Y +
Sbjct: 124 SYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
+FN LG+ +R V G++
Sbjct: 184 IFNRLGLDFRAVQADTGSI 202
>sp|A5UHN3|SYP_HAEIG Proline--tRNA ligase OS=Haemophilus influenzae (strain PittGG)
GN=proS PE=3 SV=1
Length = 572
Score = 89.0 bits (219), Expect = 9e-18, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 56/79 (70%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL LYQ +KFRDE+RP+FG+MRSREF+MKD Y+F ++ Y+++ + Y +
Sbjct: 124 SYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
+FN LG+ +R V G++
Sbjct: 184 IFNRLGLDFRAVQADTGSI 202
>sp|Q7N8M7|SYP_PHOLL Proline--tRNA ligase OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=proS PE=3 SV=1
Length = 572
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 56/79 (70%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL L+Q +KFRDE+RP+FG+MRSREFLMKD Y+F A++ + Y+ + + Y
Sbjct: 124 SYKQLPLTLFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHATQTSLQETYDNMYEAYSK 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
+F +G+ +R V+ G++
Sbjct: 184 IFTRIGLDFRAVLADTGSI 202
>sp|A7GRE9|SYP_BACCN Proline--tRNA ligase OS=Bacillus cereus subsp. cytotoxis (strain
NVH 391-98) GN=proS PE=3 SV=1
Length = 566
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ +KFRDE RP+FGL+R REFLMKD Y+F A++ ++VY+
Sbjct: 117 LVRDEIKSYKKLPLTLYQIQTKFRDEQRPRFGLLRGREFLMKDAYSFHATQESLDEVYDR 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y ++F G+ +R VI GA+
Sbjct: 177 LFQAYSNIFARCGLNFRAVIADSGAM 202
>sp|A6Q3S4|SYP_NITSB Proline--tRNA ligase OS=Nitratiruptor sp. (strain SB155-2) GN=proS
PE=3 SV=1
Length = 569
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 57/86 (66%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V + S+K LPL LYQ KFRDE RP+FGL+R REFLMKD Y+F A E D Y+L
Sbjct: 117 LVRNRVTSYKQLPLNLYQINWKFRDEARPRFGLLRGREFLMKDGYSFHADEEDMRREYDL 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ K Y ++F LG+++R V GA+
Sbjct: 177 MEKTYRNIFGRLGLRFRAVEADVGAI 202
>sp|Q5L0J4|SYP_GEOKA Proline--tRNA ligase OS=Geobacillus kaustophilus (strain HTA426)
GN=proS PE=3 SV=1
Length = 567
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D ++K LPL+LYQ +KFRDE RP+FGL+R REF+MKD Y+F S+ ++ YN
Sbjct: 117 IVRDEVKTYKRLPLVLYQIQTKFRDEKRPRFGLLRGREFMMKDAYSFHTSKESLDETYNN 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y ++F G+ +R VI GA+
Sbjct: 177 MYEAYANIFRRCGLNFRAVIADSGAI 202
>sp|A4IMD1|SYP_GEOTN Proline--tRNA ligase OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=proS PE=3 SV=1
Length = 567
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D ++K LPL+LYQ +KFRDE RP+FGL+R REF+MKD Y+F S+ ++ YN
Sbjct: 117 IVRDEVKTYKRLPLILYQIQTKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNK 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y ++F G+ +R VI GA+
Sbjct: 177 MYEAYANIFRRCGLNFRAVIADSGAM 202
>sp|B8F7C2|SYP_HAEPS Proline--tRNA ligase OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=proS PE=3 SV=1
Length = 571
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 55/79 (69%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL LYQ +KFRDE+RP+FG+MR REFLMKD Y+F S+ + Y+++ + Y +
Sbjct: 124 SYKQLPLNLYQIQTKFRDEVRPRFGVMRGREFLMKDAYSFHTSKESLQETYDVMHQTYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
+F LG+ +R V G++
Sbjct: 184 IFTRLGLDFRPVAADTGSI 202
>sp|Q65JJ1|SYP_BACLD Proline--tRNA ligase OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=proS PE=3 SV=1
Length = 572
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 57/86 (66%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL LYQ SKFRDE RP+FGL+R REF+MKD Y+F +S ++ YN
Sbjct: 117 IVRDEVKSYKRLPLTLYQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHSSAESLDETYND 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y +VF G+ +R VI GA+
Sbjct: 177 MYQAYTNVFTRCGLNFRPVIADSGAM 202
>sp|B0C230|SYP_ACAM1 Proline--tRNA ligase OS=Acaryochloris marina (strain MBIC 11017)
GN=proS PE=3 SV=1
Length = 600
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 54/83 (65%)
Query: 4 DMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGK 63
DM S++ LPL LYQ +KFRDE+RP+FGLMR REF+MKD Y+F+ E D +Y+ +
Sbjct: 123 DMIRSYRQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFSTDEADLKIIYSKMHD 182
Query: 64 CYDDVFNTLGIKYRKVIVRHGAV 86
Y ++ G+ YR V GA+
Sbjct: 183 AYCNILQRSGLAYRAVDADSGAI 205
>sp|Q4L5W5|SYP_STAHJ Proline--tRNA ligase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=proS PE=3 SV=1
Length = 566
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 55/86 (63%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D S+K LPL L+Q SKFRDE RP+FGL+R REF+MKD Y+F A E ++ Y
Sbjct: 117 IVRDELKSYKQLPLTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDETYQD 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ YD +F +GI R V+ GA+
Sbjct: 177 MYNAYDRIFKRVGINARPVVADSGAI 202
>sp|C5D9C3|SYP_GEOSW Proline--tRNA ligase OS=Geobacillus sp. (strain WCH70) GN=proS PE=3
SV=1
Length = 567
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/86 (45%), Positives = 56/86 (65%)
Query: 1 MVADMKLSHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNL 60
+V D ++K LPL LYQ KFRDE RP+FGL+R REF+MKD Y+F S+ ++ YN
Sbjct: 117 LVRDEVKTYKRLPLTLYQIQVKFRDEKRPRFGLLRGREFIMKDAYSFHTSQESLDETYNK 176
Query: 61 VGKCYDDVFNTLGIKYRKVIVRHGAV 86
+ + Y ++F G+ +R VI GA+
Sbjct: 177 MYEAYSNIFRRCGLNFRAVIADSGAI 202
>sp|B0KTK4|SYP_PSEPG Proline--tRNA ligase OS=Pseudomonas putida (strain GB-1) GN=proS
PE=3 SV=1
Length = 571
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 54/79 (68%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL +YQ +KFRDE+RP+FGLMR REF+MKD Y+F A + + Y+ + + Y +
Sbjct: 124 SYKQLPLNMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQAYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
VF LG+ +R V G++
Sbjct: 184 VFTRLGLDFRPVQADTGSI 202
>sp|B4F249|SYP_PROMH Proline--tRNA ligase OS=Proteus mirabilis (strain HI4320) GN=proS
PE=3 SV=1
Length = 571
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 56/79 (70%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL LYQ +KFRDE+RP+FG+MRSREF+MKD Y+F S+ + Y+ + + Y +
Sbjct: 124 SYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHISQESLQETYDRMYQAYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
+F +G+ +R V+ G++
Sbjct: 184 IFTRIGLDFRPVLADTGSI 202
>sp|Q1I6D7|SYP_PSEE4 Proline--tRNA ligase OS=Pseudomonas entomophila (strain L48)
GN=proS PE=3 SV=1
Length = 571
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 54/79 (68%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL +YQ +KFRDE+RP+FGLMR REF+MKD Y+F A + + Y+ + + Y +
Sbjct: 124 SYKQLPLNMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQAYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
+F LG+ +R V G++
Sbjct: 184 IFTRLGLDFRPVQADTGSI 202
>sp|Q1H497|SYP_METFK Proline--tRNA ligase OS=Methylobacillus flagellatus (strain KT /
ATCC 51484 / DSM 6875) GN=proS PE=3 SV=1
Length = 573
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL YQ +KFRDE+RP+FG+MR+REF+MKD Y+F S Y+ + + Y +
Sbjct: 124 SYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFVMKDGYSFHTSLESLQQTYDTMYQAYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
+FN LG+K+R V GA+
Sbjct: 184 IFNRLGLKFRAVRADTGAI 202
>sp|B1JD82|SYP_PSEPW Proline--tRNA ligase OS=Pseudomonas putida (strain W619) GN=proS
PE=3 SV=1
Length = 571
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 54/79 (68%)
Query: 8 SHKALPLLLYQFTSKFRDELRPKFGLMRSREFLMKDLYAFTASEVDANDVYNLVGKCYDD 67
S+K LPL +YQ +KFRDE+RP+FGLMR REF+MKD Y+F A + + Y+ + + Y +
Sbjct: 124 SYKQLPLNMYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQAYSN 183
Query: 68 VFNTLGIKYRKVIVRHGAV 86
+F LG+ +R V G++
Sbjct: 184 IFTRLGLDFRPVQADTGSI 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.142 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,642,953
Number of Sequences: 539616
Number of extensions: 998187
Number of successful extensions: 4111
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 342
Number of HSP's that attempted gapping in prelim test: 3380
Number of HSP's gapped (non-prelim): 1059
length of query: 86
length of database: 191,569,459
effective HSP length: 56
effective length of query: 30
effective length of database: 161,350,963
effective search space: 4840528890
effective search space used: 4840528890
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)