Query psy5547
Match_columns 714
No_of_seqs 501 out of 3981
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 20:19:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5547.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5547hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 9.3E-59 3.2E-63 527.0 42.8 374 320-705 107-530 (605)
2 1yuw_A Heat shock cognate 71 k 100.0 1E-57 3.6E-62 513.6 42.7 383 320-707 111-535 (554)
3 3d2f_A Heat shock protein homo 100.0 1.6E-56 5.5E-61 511.8 41.3 383 321-706 111-548 (675)
4 2kho_A Heat shock protein 70; 100.0 4.5E-57 1.5E-61 513.2 34.3 372 321-704 108-529 (605)
5 2v7y_A Chaperone protein DNAK; 100.0 4E-55 1.4E-59 489.0 41.7 374 321-707 82-501 (509)
6 4b9q_A Chaperone protein DNAK; 100.0 6.9E-45 2.4E-49 413.1 36.9 288 1-299 317-604 (605)
7 3d2f_A Heat shock protein homo 100.0 2.2E-45 7.4E-50 419.9 29.0 301 1-309 318-636 (675)
8 2kho_A Heat shock protein 70; 100.0 2.5E-44 8.5E-49 408.6 34.2 288 1-299 317-604 (605)
9 3i33_A Heat shock-related 70 k 100.0 6.1E-44 2.1E-48 389.3 34.4 273 321-596 131-403 (404)
10 4gni_A Putative heat shock pro 100.0 4.9E-44 1.7E-48 390.5 31.9 275 319-597 121-404 (409)
11 3qfu_A 78 kDa glucose-regulate 100.0 5E-43 1.7E-47 381.0 34.7 270 320-595 125-394 (394)
12 1dkg_D Molecular chaperone DNA 100.0 2.6E-41 9E-46 365.8 28.5 267 321-594 108-382 (383)
13 1yuw_A Heat shock cognate 71 k 100.0 4.8E-38 1.7E-42 353.6 20.7 240 1-240 314-553 (554)
14 4e81_A Chaperone protein DNAK; 100.0 9.2E-36 3.1E-40 290.7 27.8 216 78-299 1-216 (219)
15 1u00_A HSC66, chaperone protei 100.0 2.3E-33 7.9E-38 276.9 28.4 213 81-299 1-213 (227)
16 2v7y_A Chaperone protein DNAK; 100.0 2.7E-34 9.1E-39 320.7 20.0 223 2-230 287-509 (509)
17 1jce_A ROD shape-determining p 100.0 6.2E-32 2.1E-36 287.8 19.7 241 325-595 76-327 (344)
18 3n8e_A Stress-70 protein, mito 100.0 1.6E-29 5.5E-34 238.0 20.2 166 75-241 17-182 (182)
19 3h0x_A 78 kDa glucose-regulate 99.9 7.2E-27 2.5E-31 214.5 16.9 151 80-230 2-152 (152)
20 3dob_A Heat shock 70 kDa prote 99.9 5.4E-27 1.8E-31 214.9 14.8 151 80-230 2-152 (152)
21 3dqg_A Heat shock 70 kDa prote 99.9 8.8E-27 3E-31 213.2 11.6 150 80-230 2-151 (151)
22 2op6_A Heat shock 70 kDa prote 99.9 4.6E-25 1.6E-29 204.0 15.6 151 80-230 2-152 (152)
23 3h1q_A Ethanolamine utilizatio 99.9 2.2E-23 7.4E-28 214.1 19.1 202 327-591 71-272 (272)
24 2fsj_A Hypothetical protein TA 99.9 5.4E-23 1.9E-27 217.7 12.9 230 322-592 94-343 (346)
25 4a2a_A Cell division protein F 99.9 1.7E-21 5.7E-26 210.7 20.8 197 364-594 170-394 (419)
26 2ych_A Competence protein PILM 99.8 3.6E-21 1.2E-25 207.3 10.7 220 322-575 97-336 (377)
27 2fxu_A Alpha-actin-1, actin, a 99.8 8.2E-20 2.8E-24 196.0 17.1 237 333-592 82-348 (375)
28 1k8k_A ARP3, actin-like protei 99.8 1.3E-19 4.6E-24 197.5 18.3 242 333-592 89-386 (418)
29 1q5l_A Chaperone protein DNAK; 99.8 4.9E-20 1.7E-24 165.4 10.2 120 74-193 13-132 (135)
30 2zgy_A Plasmid segregation pro 99.7 3.8E-18 1.3E-22 179.0 7.1 227 322-591 73-319 (320)
31 1k8k_B ARP2, actin-like protei 99.6 1.7E-15 5.9E-20 163.2 5.7 214 349-592 105-363 (394)
32 3js6_A Uncharacterized PARM pr 99.5 6.9E-15 2.4E-19 155.4 7.9 209 349-596 114-339 (355)
33 4ehu_A Activator of 2-hydroxyi 99.5 3.8E-14 1.3E-18 145.3 11.0 219 323-595 33-256 (276)
34 3lof_A Heat shock 70 kDa prote 99.4 1.1E-12 3.7E-17 114.3 10.5 83 218-300 3-85 (113)
35 3dob_A Heat shock 70 kDa prote 99.4 5.5E-13 1.9E-17 121.8 8.8 101 607-707 2-144 (152)
36 3h0x_A 78 kDa glucose-regulate 99.4 1.3E-12 4.4E-17 119.6 9.0 101 607-707 2-144 (152)
37 3dqg_A Heat shock 70 kDa prote 99.3 1.7E-12 5.8E-17 118.4 9.0 100 607-707 2-143 (151)
38 4apw_A ALP12; actin-like prote 99.3 5.8E-13 2E-17 139.5 6.1 204 349-595 106-326 (329)
39 3n8e_A Stress-70 protein, mito 99.3 4.2E-12 1.4E-16 119.3 8.0 104 603-707 18-163 (182)
40 4e81_A Chaperone protein DNAK; 99.3 6.9E-12 2.3E-16 122.1 7.8 99 606-705 2-142 (219)
41 3dwl_A Actin-related protein 3 99.2 1E-11 3.5E-16 134.2 9.6 241 332-592 104-395 (427)
42 2d0o_A DIOL dehydratase-reacti 99.2 9.7E-12 3.3E-16 131.9 6.5 196 362-592 368-603 (610)
43 1nbw_A Glycerol dehydratase re 99.2 1.3E-11 4.4E-16 131.6 6.0 201 352-591 364-604 (607)
44 2p32_A Heat shock 70 kDa prote 99.2 2.3E-11 7.8E-16 106.9 6.5 87 219-305 13-100 (120)
45 1ud0_A HSC70, 70 kDa heat-shoc 99.1 5.2E-11 1.8E-15 103.7 5.9 84 222-305 2-86 (113)
46 2op6_A Heat shock 70 kDa prote 99.1 1.6E-10 5.6E-15 106.2 8.7 101 607-707 2-144 (152)
47 3qb0_A Actin-related protein 4 99.1 3.6E-10 1.2E-14 123.3 12.3 93 350-457 116-209 (498)
48 3i33_A Heat shock-related 70 k 99.1 1E-10 3.4E-15 126.7 7.5 68 2-69 336-403 (404)
49 4gni_A Putative heat shock pro 99.0 2.1E-10 7.2E-15 124.4 7.4 68 2-69 329-403 (409)
50 3qfu_A 78 kDa glucose-regulate 99.0 2.4E-10 8.2E-15 123.3 7.5 66 2-67 328-393 (394)
51 1dkg_D Molecular chaperone DNA 98.9 7.9E-10 2.7E-14 118.7 5.5 65 2-67 318-382 (383)
52 1u00_A HSC66, chaperone protei 98.9 4.4E-09 1.5E-13 103.3 8.5 97 608-705 1-139 (227)
53 4fo0_A Actin-related protein 8 98.8 2.8E-08 9.4E-13 113.1 16.4 122 321-458 166-294 (593)
54 1hux_A Activator of (R)-2-hydr 98.2 5E-06 1.7E-10 84.1 11.2 74 517-595 185-258 (270)
55 1jce_A ROD shape-determining p 98.2 1.8E-07 6.1E-12 98.7 0.2 65 2-67 259-326 (344)
56 4ehu_A Activator of 2-hydroxyi 98.2 1E-06 3.4E-11 89.8 4.5 61 6-67 195-255 (276)
57 4am6_A Actin-like protein ARP8 98.1 9E-06 3.1E-10 89.6 10.0 114 331-458 197-318 (655)
58 1q5l_A Chaperone protein DNAK; 97.8 1.3E-05 4.5E-10 71.4 5.1 48 602-649 14-71 (135)
59 3h1q_A Ethanolamine utilizatio 97.8 1E-05 3.6E-10 81.9 3.8 47 17-64 226-272 (272)
60 2ews_A Pantothenate kinase; PA 97.3 0.0021 7.3E-08 64.6 13.6 47 545-591 237-286 (287)
61 2zgy_A Plasmid segregation pro 97.3 0.00013 4.5E-09 75.7 4.2 48 15-64 270-319 (320)
62 2fsj_A Hypothetical protein TA 97.2 0.00011 3.9E-09 76.9 2.5 59 2-65 284-343 (346)
63 2i7n_A Pantothenate kinase 1; 97.2 0.0033 1.1E-07 65.0 13.2 70 517-591 279-358 (360)
64 4a2a_A Cell division protein F 96.9 0.00021 7.3E-09 76.7 1.6 65 2-67 307-394 (419)
65 2ych_A Competence protein PILM 96.9 0.00043 1.5E-08 73.6 3.7 53 2-56 289-343 (377)
66 2fxu_A Alpha-actin-1, actin, a 96.9 0.00021 7.1E-09 75.9 0.9 63 3-65 277-348 (375)
67 3l0q_A Xylulose kinase; xlylul 96.3 0.0066 2.3E-07 67.8 8.6 85 511-597 409-493 (554)
68 2itm_A Xylulose kinase, xylulo 96.2 0.0081 2.8E-07 65.9 7.9 79 518-597 360-438 (484)
69 4bc3_A Xylulose kinase; transf 96.0 0.012 3.9E-07 65.5 8.4 78 517-596 407-484 (538)
70 3ll3_A Gluconate kinase; xylul 96.0 0.011 3.9E-07 65.0 8.1 78 518-597 367-444 (504)
71 2zf5_O Glycerol kinase; hypert 96.0 0.012 4.2E-07 64.7 8.3 77 518-597 368-444 (497)
72 1k8k_A ARP3, actin-like protei 96.0 0.0019 6.4E-08 69.6 1.6 64 2-65 298-386 (418)
73 3hz6_A Xylulokinase; xylulose, 95.9 0.014 4.7E-07 64.4 8.1 76 518-597 378-454 (511)
74 3i8b_A Xylulose kinase; strain 95.9 0.01 3.4E-07 65.5 7.0 78 518-597 398-475 (515)
75 3g25_A Glycerol kinase; IDP007 95.6 0.015 5.2E-07 64.0 7.1 77 519-597 378-455 (501)
76 3jvp_A Ribulokinase; PSI-II, N 95.6 0.015 5E-07 65.2 6.9 80 512-596 410-490 (572)
77 3ezw_A Glycerol kinase; glycer 95.6 0.013 4.6E-07 64.8 6.4 77 519-597 376-453 (526)
78 4apw_A ALP12; actin-like prote 95.5 0.013 4.5E-07 60.6 5.8 61 4-67 265-325 (329)
79 4e1j_A Glycerol kinase; struct 95.5 0.013 4.3E-07 64.9 6.0 76 519-597 397-476 (520)
80 3ifr_A Carbohydrate kinase, FG 95.5 0.014 4.8E-07 64.3 6.2 81 512-597 371-451 (508)
81 3js6_A Uncharacterized PARM pr 95.5 0.0069 2.4E-07 63.4 3.5 57 7-68 280-338 (355)
82 2p3r_A Glycerol kinase; glycer 95.5 0.015 5.2E-07 64.1 6.4 77 519-597 375-452 (510)
83 3h3n_X Glycerol kinase; ATP-bi 95.4 0.017 6E-07 63.6 6.7 81 512-597 373-454 (506)
84 2dpn_A Glycerol kinase; thermu 95.3 0.027 9.3E-07 61.8 8.0 78 518-597 371-449 (495)
85 2d4w_A Glycerol kinase; alpha 95.1 0.024 8.4E-07 62.3 6.5 81 512-597 373-454 (504)
86 2w40_A Glycerol kinase, putati 94.8 0.031 1.1E-06 61.5 6.6 77 519-597 380-458 (503)
87 1t6c_A Exopolyphosphatase; alp 94.6 0.2 6.9E-06 51.2 11.4 80 362-451 98-177 (315)
88 1hux_A Activator of (R)-2-hydr 94.2 0.039 1.3E-06 55.3 4.9 49 18-67 209-257 (270)
89 2uyt_A Rhamnulokinase; rhamnos 94.2 0.053 1.8E-06 59.4 6.4 79 511-595 362-441 (489)
90 4bc3_A Xylulose kinase; transf 94.1 0.063 2.1E-06 59.5 6.9 60 6-67 423-482 (538)
91 3i8b_A Xylulose kinase; strain 94.1 0.059 2E-06 59.4 6.5 59 5-68 415-473 (515)
92 3l0q_A Xylulose kinase; xlylul 93.8 0.059 2E-06 60.0 5.9 60 5-69 433-492 (554)
93 3ll3_A Gluconate kinase; xylul 93.8 0.066 2.2E-06 58.9 6.2 59 6-69 385-443 (504)
94 3hz6_A Xylulokinase; xylulose, 93.5 0.061 2.1E-06 59.2 5.3 51 18-69 403-453 (511)
95 3ifr_A Carbohydrate kinase, FG 93.1 0.086 3E-06 58.0 5.7 60 5-69 391-450 (508)
96 3ezw_A Glycerol kinase; glycer 93.0 0.1 3.4E-06 57.7 6.0 55 10-69 398-452 (526)
97 2itm_A Xylulose kinase, xylulo 92.9 0.099 3.4E-06 57.1 5.8 60 6-69 378-437 (484)
98 3jvp_A Ribulokinase; PSI-II, N 92.9 0.078 2.7E-06 59.3 5.0 59 6-69 431-490 (572)
99 3g25_A Glycerol kinase; IDP007 92.9 0.11 3.8E-06 57.0 6.2 59 6-69 395-454 (501)
100 1k8k_B ARP2, actin-like protei 92.7 0.024 8.4E-07 60.2 0.6 63 3-65 281-363 (394)
101 3h3n_X Glycerol kinase; ATP-bi 92.7 0.13 4.3E-06 56.6 6.3 59 6-69 394-453 (506)
102 4e1j_A Glycerol kinase; struct 92.7 0.1 3.5E-06 57.6 5.5 51 17-69 425-475 (520)
103 2zf5_O Glycerol kinase; hypert 92.5 0.15 5E-06 56.0 6.5 51 17-69 393-443 (497)
104 3h6e_A Carbohydrate kinase, FG 91.8 0.19 6.4E-06 54.7 6.2 71 517-593 362-435 (482)
105 3mdq_A Exopolyphosphatase; str 91.6 0.65 2.2E-05 47.3 9.7 121 322-451 48-170 (315)
106 2p3r_A Glycerol kinase; glycer 91.4 0.14 4.7E-06 56.3 4.7 51 17-69 401-451 (510)
107 2d4w_A Glycerol kinase; alpha 91.2 0.16 5.5E-06 55.8 4.9 51 17-69 403-453 (504)
108 2dpn_A Glycerol kinase; thermu 91.0 0.17 5.7E-06 55.5 4.8 51 17-69 398-448 (495)
109 3r8e_A Hypothetical sugar kina 90.8 3 0.0001 42.4 13.9 49 544-592 260-318 (321)
110 2w40_A Glycerol kinase, putati 90.4 0.2 7E-06 54.9 4.8 50 18-69 407-457 (503)
111 3en9_A Glycoprotease, O-sialog 90.2 8.4 0.00029 42.3 17.8 217 322-576 43-282 (540)
112 3cer_A Possible exopolyphospha 89.6 0.81 2.8E-05 47.2 8.3 124 322-451 61-191 (343)
113 1nbw_A Glycerol dehydratase re 89.4 0.34 1.1E-05 52.3 5.3 61 5-65 533-605 (607)
114 2ews_A Pantothenate kinase; PA 89.4 0.23 7.7E-06 49.8 3.7 49 16-64 235-286 (287)
115 2d0o_A DIOL dehydratase-reacti 88.7 0.33 1.1E-05 52.3 4.5 60 6-65 532-603 (610)
116 2ivn_A O-sialoglycoprotein end 87.9 25 0.00085 35.7 22.5 52 544-595 244-300 (330)
117 2uyt_A Rhamnulokinase; rhamnos 87.8 0.43 1.5E-05 52.1 5.1 55 6-66 384-439 (489)
118 4db3_A Glcnac kinase, N-acetyl 87.6 26 0.00087 35.5 18.7 48 544-591 269-324 (327)
119 1u6z_A Exopolyphosphatase; alp 87.5 2 6.7E-05 47.0 10.1 119 322-451 55-176 (513)
120 3vgl_A Glucokinase; ROK family 86.7 22 0.00077 35.8 17.1 88 324-424 36-139 (321)
121 3h6e_A Carbohydrate kinase, FG 85.9 0.45 1.5E-05 51.7 3.8 46 19-66 389-435 (482)
122 3hi0_A Putative exopolyphospha 84.2 2.6 8.8E-05 46.0 8.9 116 323-450 60-178 (508)
123 3qbx_A Anhydro-N-acetylmuramic 83.7 2.3 7.8E-05 43.8 7.6 71 521-594 263-337 (371)
124 1z6r_A MLC protein; transcript 80.4 34 0.0011 35.7 15.8 92 323-424 119-229 (406)
125 3eno_A Putative O-sialoglycopr 80.0 4 0.00014 41.8 8.0 69 524-597 234-307 (334)
126 4g9i_A Hydrogenase maturation 77.0 5.3 0.00018 45.7 8.5 53 544-596 705-763 (772)
127 3cqy_A Anhydro-N-acetylmuramic 76.9 6.1 0.00021 40.7 8.1 73 518-594 267-343 (370)
128 2i7n_A Pantothenate kinase 1; 76.8 1.9 6.3E-05 44.5 4.2 48 17-64 305-358 (360)
129 2ch5_A NAGK protein; transfera 75.1 74 0.0025 32.1 20.9 69 324-392 44-118 (347)
130 2e2o_A Hexokinase; acetate and 74.8 68 0.0023 31.6 22.4 50 544-594 239-288 (299)
131 3aap_A Ectonucleoside triphosp 74.0 4.2 0.00015 41.9 6.2 48 378-425 110-158 (353)
132 3ttc_A HYPF, transcriptional r 73.8 7 0.00024 43.7 8.2 50 544-593 599-651 (657)
133 3vth_A Hydrogenase maturation 71.1 5.3 0.00018 45.6 6.5 53 544-596 693-750 (761)
134 2e1z_A Propionate kinase; TDCD 66.3 58 0.002 33.9 12.6 41 528-568 314-355 (415)
135 3ven_A O-carbamoyltransferase 64.8 15 0.00051 40.3 8.2 80 513-597 280-361 (576)
136 2ap1_A Putative regulator prot 64.6 65 0.0022 32.2 12.9 224 319-591 54-324 (327)
137 1g99_A Acetate kinase; alpha/b 63.7 29 0.00099 36.1 9.7 44 521-568 303-347 (408)
138 3cet_A Conserved archaeal prot 61.3 6.5 0.00022 39.8 4.2 72 511-590 243-321 (334)
139 2gup_A ROK family protein; sug 58.9 26 0.00088 34.6 8.4 50 545-594 228-288 (292)
140 3zx3_A Ectonucleoside triphosp 55.8 32 0.0011 36.5 8.6 101 324-425 83-199 (452)
141 1hnj_A Beta-ketoacyl-acyl carr 55.7 7 0.00024 39.4 3.5 37 3-42 223-259 (317)
142 4htl_A Beta-glucoside kinase; 55.4 25 0.00086 35.0 7.6 51 544-594 237-292 (297)
143 1msz_A DNA-binding protein smu 55.1 8.7 0.0003 30.4 3.1 28 351-378 34-61 (86)
144 2iir_A Acetate kinase; transfe 53.5 69 0.0024 33.2 10.4 44 521-568 303-347 (403)
145 3khy_A Propionate kinase; csgi 53.1 56 0.0019 33.6 9.5 25 544-568 313-338 (384)
146 3cj1_A Ectonucleoside triphosp 53.0 21 0.00072 38.1 6.8 20 406-425 189-208 (456)
147 2ebd_A 3-oxoacyl-[acyl-carrier 53.0 7.7 0.00026 38.9 3.3 37 3-42 215-251 (309)
148 2qm1_A Glucokinase; alpha-beta 50.6 37 0.0013 34.0 8.1 48 545-592 263-320 (326)
149 2gp6_A 3-oxoacyl-[acyl-carrier 49.8 10 0.00034 40.4 3.7 42 3-44 307-350 (434)
150 1ub7_A 3-oxoacyl-[acyl-carrier 49.8 8.4 0.00029 38.9 3.0 37 3-42 225-261 (322)
151 3vov_A Glucokinase, hexokinase 48.8 2.1E+02 0.007 28.2 21.2 49 544-592 237-294 (302)
152 1j3n_A 3-oxoacyl-(acyl-carrier 48.6 8.2 0.00028 40.7 2.7 40 3-42 280-321 (408)
153 2aa4_A Mannac kinase, putative 47.2 27 0.00092 34.4 6.2 47 545-591 234-286 (289)
154 3o8m_A Hexokinase; rnaseh-like 45.9 70 0.0024 34.2 9.4 25 405-429 78-102 (485)
155 1mzj_A Beta-ketoacylsynthase I 44.3 8.4 0.00029 39.3 1.9 37 3-42 236-272 (339)
156 2x3e_A 3-oxoacyl-[acyl-carrier 43.5 8.9 0.0003 39.0 1.9 37 3-42 229-265 (331)
157 1zow_A 3-oxoacyl-[acyl-carrier 43.3 9.8 0.00034 38.2 2.2 37 3-42 217-253 (313)
158 3sk3_A Acetate kinase, acetoki 43.3 99 0.0034 32.2 9.7 44 525-568 319-364 (415)
159 3dwl_A Actin-related protein 3 43.1 14 0.00046 39.2 3.3 47 19-65 328-395 (427)
160 4fo0_A Actin-related protein 8 42.9 13 0.00046 41.2 3.4 47 19-65 502-563 (593)
161 2gqd_A 3-oxoacyl-[acyl-carrier 42.8 13 0.00043 39.6 3.1 40 3-42 306-347 (437)
162 2e2o_A Hexokinase; acetate and 42.7 15 0.00051 36.6 3.5 49 17-66 239-287 (299)
163 1e5m_A KAS II, beta ketoacyl a 41.6 14 0.00047 39.0 3.1 40 3-42 286-327 (416)
164 1tqy_A Beta-ketoacyl synthase/ 41.6 14 0.00048 39.1 3.2 41 3-43 288-330 (424)
165 1saz_A Probable butyrate kinas 40.9 45 0.0015 34.5 7.0 48 544-591 295-346 (381)
166 2iwz_A 3-oxoacyl-[acyl-carrier 40.8 14 0.00049 39.2 3.1 40 3-42 306-347 (438)
167 1ox0_A Beta ketoacyl-acyl carr 40.0 16 0.00056 38.6 3.4 41 3-43 301-343 (430)
168 1zbs_A Hypothetical protein PG 39.9 20 0.00068 35.6 3.9 68 520-595 212-282 (291)
169 1u6e_A 3-oxoacyl-[acyl-carrier 39.9 11 0.00037 38.3 1.9 37 3-42 237-273 (335)
170 3vth_A Hydrogenase maturation 37.7 27 0.00091 39.8 4.8 51 18-68 694-749 (761)
171 1zc6_A Probable N-acetylglucos 37.4 23 0.0008 35.3 4.0 61 522-592 230-292 (305)
172 1ted_A PKS18; thiolase fold, s 36.5 14 0.00047 38.7 2.1 37 3-42 292-328 (393)
173 4g9i_A Hydrogenase maturation 36.3 37 0.0013 38.8 5.7 51 17-67 705-760 (772)
174 2yhx_A Hexokinase B; transfera 36.1 1.6E+02 0.0053 31.3 10.3 53 405-457 59-117 (457)
175 3htv_A D-allose kinase, alloki 35.5 95 0.0033 30.9 8.2 50 544-593 239-299 (310)
176 3qbx_A Anhydro-N-acetylmuramic 35.5 48 0.0017 34.0 5.9 51 17-67 283-337 (371)
177 2hoe_A N-acetylglucosamine kin 34.8 91 0.0031 32.0 8.2 48 545-592 315-370 (380)
178 3zyy_X Iron-sulfur cluster bin 34.6 78 0.0027 35.0 7.7 57 508-565 499-555 (631)
179 2gup_A ROK family protein; sug 33.9 57 0.002 32.0 6.2 51 17-67 227-288 (292)
180 3r8e_A Hypothetical sugar kina 33.6 39 0.0013 34.0 4.9 48 17-64 260-317 (321)
181 1u0m_A Putative polyketide syn 33.4 13 0.00043 38.8 1.2 37 3-42 257-293 (382)
182 3bex_A Type III pantothenate k 33.3 90 0.0031 30.0 7.3 44 513-557 180-223 (249)
183 4am6_A Actin-like protein ARP8 31.6 25 0.00087 38.9 3.2 24 545-568 501-524 (655)
184 1tqy_B Actinorhodin polyketide 30.3 18 0.0006 38.2 1.7 41 3-43 284-326 (415)
185 3ttc_A HYPF, transcriptional r 29.6 83 0.0029 35.0 7.0 50 17-66 599-651 (657)
186 3qb0_A Actin-related protein 4 29.4 24 0.00083 38.0 2.6 47 19-65 415-470 (498)
187 4fla_A Regulation of nuclear P 29.4 2.9E+02 0.0099 24.2 10.1 47 253-299 97-146 (152)
188 4dfe_A 3-oxoacyl-[acyl-carrier 29.2 34 0.0011 34.7 3.6 37 3-42 239-275 (333)
189 2wge_A 3-oxoacyl-[acyl-carrier 29.0 19 0.00065 37.9 1.7 28 3-30 290-317 (416)
190 2ix4_A 3-oxoacyl-[acyl-carrier 28.8 19 0.00066 38.1 1.7 40 3-42 299-340 (431)
191 4htl_A Beta-glucoside kinase; 28.7 42 0.0014 33.3 4.1 50 17-66 237-291 (297)
192 4i95_A Putative uncharacterize 26.3 2.1E+02 0.0073 24.4 7.2 46 131-177 63-108 (142)
193 3euo_A Type III pentaketide sy 26.0 82 0.0028 32.5 5.9 61 3-63 88-151 (379)
194 3cqy_A Anhydro-N-acetylmuramic 25.9 1E+02 0.0035 31.6 6.3 51 17-67 289-343 (370)
195 3hm8_A Hexokinase-3; glucose, 25.8 2.2E+02 0.0075 29.9 9.1 30 405-435 57-86 (445)
196 3vgl_A Glucokinase; ROK family 25.7 59 0.002 32.6 4.7 49 17-65 252-311 (321)
197 2nr5_A Hypothetical protein SO 25.7 1.3E+02 0.0045 20.7 4.8 24 246-269 38-61 (67)
198 4ewp_A 3-oxoacyl-[acyl-carrier 25.3 42 0.0015 34.1 3.5 43 2-44 68-112 (350)
199 3o04_A LMO2201 protein, beta-k 25.3 29 0.001 36.4 2.3 41 3-43 282-324 (413)
200 3htv_A D-allose kinase, alloki 25.0 76 0.0026 31.6 5.3 50 16-65 238-298 (310)
201 3il6_A 3-oxoacyl-[acyl-carrier 24.6 78 0.0027 31.7 5.3 59 3-62 59-120 (321)
202 3s21_A 3-oxoacyl-[ACP] synthas 24.6 47 0.0016 33.8 3.7 37 3-42 251-287 (345)
203 2h84_A Steely1; thiolase-fold, 24.5 52 0.0018 33.8 4.0 42 3-44 102-144 (374)
204 3kzu_A 3-oxoacyl-(acyl-carrier 24.4 31 0.0011 36.4 2.3 41 3-43 298-339 (428)
205 3epq_A Putative fructokinase; 24.3 1.1E+02 0.0036 30.4 6.2 44 374-424 97-140 (302)
206 3ven_A O-carbamoyltransferase 24.0 1E+02 0.0035 33.7 6.3 54 17-70 307-361 (576)
207 3ho9_A 3-oxoacyl-[acyl-carrier 23.8 33 0.0011 36.2 2.3 40 3-42 297-338 (427)
208 2yhw_A Bifunctional UDP-N-acet 23.4 1.9E+02 0.0065 28.9 8.1 57 358-424 117-174 (343)
209 4efi_A 3-oxoacyl-(acyl-carrier 23.2 93 0.0032 31.7 5.6 41 3-43 73-115 (354)
210 2c41_A DPS family DNA-binding 22.9 3.6E+02 0.012 23.3 9.0 66 276-341 45-111 (158)
211 3s21_A 3-oxoacyl-[ACP] synthas 22.8 92 0.0031 31.5 5.5 60 2-62 74-137 (345)
212 2aa4_A Mannac kinase, putative 22.8 42 0.0014 33.0 2.8 48 17-64 233-286 (289)
213 1xpm_A 3-hydroxy-3-methylgluta 22.7 34 0.0012 35.7 2.2 36 3-40 212-247 (396)
214 3epq_A Putative fructokinase; 22.7 75 0.0026 31.5 4.7 49 17-65 224-288 (302)
215 1zxo_A Conserved hypothetical 22.5 13 0.00045 36.9 -1.1 46 544-592 232-277 (291)
216 2hg4_A DEBS, 6-deoxyerythronol 22.1 52 0.0018 38.5 3.8 41 3-43 313-355 (917)
217 4ewg_A Beta-ketoacyl synthase; 22.1 27 0.00093 36.6 1.3 42 3-44 284-327 (412)
218 3led_A 3-oxoacyl-acyl carrier 22.0 72 0.0025 33.1 4.5 41 3-43 124-166 (392)
219 1wdp_A Beta-amylase; (beta/alp 21.7 98 0.0034 32.7 5.2 56 321-376 146-226 (495)
220 4dfe_A 3-oxoacyl-[acyl-carrier 21.6 94 0.0032 31.2 5.2 42 2-43 71-114 (333)
221 3e1h_A PKSIIINC, putative unch 21.5 1.1E+02 0.0038 32.5 5.9 61 3-63 117-180 (465)
222 3s3l_A CERJ; acyltransferase, 21.4 40 0.0014 34.5 2.4 35 3-37 243-278 (357)
223 3vov_A Glucokinase, hexokinase 21.4 53 0.0018 32.6 3.2 49 17-65 237-294 (302)
224 2ebd_A 3-oxoacyl-[acyl-carrier 21.2 80 0.0027 31.2 4.6 43 2-44 56-100 (309)
225 2d5k_A DPS, DPS family protein 21.1 2.7E+02 0.0094 24.1 7.7 66 276-341 42-108 (156)
226 1bdg_A Hexokinase; phosphotran 20.9 3.3E+02 0.011 28.7 9.5 24 405-428 66-89 (451)
227 4ddo_A 3-oxoacyl-[acyl-carrier 20.7 34 0.0012 36.4 1.7 41 3-43 313-355 (451)
228 1jig_A DLP-2; dodecamer, four- 20.7 2.9E+02 0.01 23.4 7.7 66 276-341 40-106 (146)
229 1hnj_A Beta-ketoacyl-acyl carr 20.5 1.1E+02 0.0036 30.4 5.3 43 2-44 57-101 (317)
230 3il3_A 3-oxoacyl-[acyl-carrier 20.4 1.2E+02 0.0042 30.3 5.8 42 2-43 64-107 (323)
231 4dd5_A Acetyl-COA acetyltransf 20.4 1.3E+02 0.0046 31.0 6.2 42 2-43 37-80 (396)
232 1z05_A Transcriptional regulat 20.3 2E+02 0.0067 30.0 7.6 90 324-424 143-251 (429)
233 4e1l_A Acetoacetyl-COA thiolas 20.2 1.2E+02 0.0042 31.3 5.9 42 2-43 35-78 (395)
234 3v7i_A Putative polyketide syn 20.2 1.1E+02 0.0036 32.1 5.4 43 2-44 143-186 (413)
235 2q2r_A Glucokinase 1, putative 20.1 1.2E+02 0.0039 31.1 5.6 49 545-593 305-371 (373)
236 2qo3_A Eryaii erythromycin pol 20.0 47 0.0016 38.9 2.8 40 3-42 291-332 (915)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=9.3e-59 Score=526.99 Aligned_cols=374 Identities=47% Similarity=0.728 Sum_probs=337.0
Q ss_pred CCCCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccC
Q psy5547 320 GPGPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVG 399 (714)
Q Consensus 320 ~~~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~ 399 (714)
+..++|+++++++|++|++.++.++|.++.++|||||++|++.||+++++|++.|||+++++++||+|||++|+.....
T Consensus 107 ~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~- 185 (605)
T 4b9q_A 107 GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGT- 185 (605)
T ss_dssp TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCC-
T ss_pred CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhccC-
Confidence 3589999999999999999999999999999999999999999999999999999999999999999999999876531
Q ss_pred CCCCCCCcEEEEEEeCCceEEEEEEEEeC----CEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHH
Q psy5547 400 SAAGSGERNVLIFDLGGGTFDVSILTIED----GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALR 475 (714)
Q Consensus 400 ~~~~~~~~~vlVvD~GggT~Dvsv~~~~~----~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~ 475 (714)
.+.+++|||+||||||++++++.+ +.++++++.|+..+||.+||+.|++|+.++|..+++.+...+++.+.
T Consensus 186 -----~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~ 260 (605)
T 4b9q_A 186 -----GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQ 260 (605)
T ss_dssp -----SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHH
T ss_pred -----CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHH
Confidence 468999999999999999999987 89999999999999999999999999999999988888888999999
Q ss_pred HHHHHHHHHhHhcCCCCeeEEEEecccCC----ceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEE
Q psy5547 476 RLRTACERAKRTLSSSTQASIEIDSLFEG----VDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLV 551 (714)
Q Consensus 476 ~l~~~~e~~K~~ls~~~~~~i~i~~~~~~----~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLv 551 (714)
+|+.+||++|+.||......+.++.+..+ .++.+.|||++|++++.++++++..+++++|+++++...+|+.|+||
T Consensus 261 ~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLv 340 (605)
T 4b9q_A 261 RLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILV 340 (605)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEE
T ss_pred HHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEe
Confidence 99999999999999999888888765433 57889999999999999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCCCcccccceEEEEeecceeEEEEeCCeeEEeeCCC
Q psy5547 552 GGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGFELTSIPPA 631 (714)
Q Consensus 552 GG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~~~~~~v~~~sigi~~~~g~~~~~i~~~ 631 (714)
||+|++|+|+++|++.| +.++..+.||++|||+|||++|+.+++. ++++.+.|++|+||||++.+|.|.++||+|
T Consensus 341 GG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l~dv~p~slgie~~~g~~~~ii~rn 415 (605)
T 4b9q_A 341 GGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKN 415 (605)
T ss_dssp SGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEEECBCSSCEEEEETTTEEEEEECTT
T ss_pred CCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEEEeeeeeEEEEEEcCCEEEEEEeCC
Confidence 99999999999999999 7888899999999999999999999986 578999999999999999999999999999
Q ss_pred CCcccc---------cccc-eeeeeeec---------CCCcc-------cCCCCccc-------ccceeeee--------
Q psy5547 632 TSRLCL---------DEVT-ASISMLTG---------YPGLC-------LPSGSQLV-------REDKINIT-------- 670 (714)
Q Consensus 632 t~~~~~---------d~~t-~~i~~~~~---------y~g~~-------~p~g~~~~-------~~~~l~~~-------- 670 (714)
|++|+. |+++ ..+.++.| +.|.| .|+|.|.+ .||.|+++
T Consensus 416 t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~ 495 (605)
T 4b9q_A 416 TTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGK 495 (605)
T ss_dssp CBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTSCEEEEEEETTTCC
T ss_pred CcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcCCcEEEEEEEecCCCc
Confidence 999863 4554 56777765 22333 56677765 78888854
Q ss_pred -eeEEEEeccccccHHHHHHHHHHhhhhhhhhhhhh
Q psy5547 671 -KTVIFVSCSQRRCIERYVEMIAIAGRCTRHRRMRY 705 (714)
Q Consensus 671 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (714)
..+++++. .+||+++|++|+++|++++++|+.+.
T Consensus 496 ~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~ 530 (605)
T 4b9q_A 496 EQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCE 530 (605)
T ss_dssp EECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHH
Confidence 46788766 47999999999999999999766543
No 2
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1e-57 Score=513.64 Aligned_cols=383 Identities=73% Similarity=1.010 Sum_probs=344.0
Q ss_pred CCCCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccC
Q psy5547 320 GPGPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVG 399 (714)
Q Consensus 320 ~~~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~ 399 (714)
++.++|+++++++|++|++.++.++|.++.++|||||++|++.||+++++|++.||++++++++||+|||++|+.+...
T Consensus 111 ~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~- 189 (554)
T 1yuw_A 111 TKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV- 189 (554)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTC-
T ss_pred ceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccC-
Confidence 3578999999999999999999999999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHH
Q psy5547 400 SAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRT 479 (714)
Q Consensus 400 ~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 479 (714)
..+.+++|||+||||||++++++.++.++++++.|+..+||.+||+.|++++.++|..+++.+...+++.+.+|+.
T Consensus 190 ----~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 265 (554)
T 1yuw_A 190 ----GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRT 265 (554)
T ss_dssp ----SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHH
T ss_pred ----CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHH
Confidence 1468899999999999999999999999999999999999999999999999999998888888888899999999
Q ss_pred HHHHHhHhcCCCCeeEEEEecccCCceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHH
Q psy5547 480 ACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 559 (714)
Q Consensus 480 ~~e~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~ 559 (714)
+||++|+.|+...+..+.++.+.+|.++...|+|++|++++.++++++...|+++|+++++...+|+.|+||||+|++|+
T Consensus 266 ~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~ 345 (554)
T 1yuw_A 266 ACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPK 345 (554)
T ss_dssp HHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHH
T ss_pred HHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChH
Confidence 99999999999999999998888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCCCcccccceEEEEeecceeEEEEeCCeeEEeeCCCCCcccc--
Q psy5547 560 VQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGFELTSIPPATSRLCL-- 637 (714)
Q Consensus 560 l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~~~~~~v~~~sigi~~~~g~~~~~i~~~t~~~~~-- 637 (714)
|+++|++.|++.++..+.||++|||+|||++|+.+++...++++++.+.|++|+|||+++.+|.|.++||+|+++|+.
T Consensus 346 v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~ 425 (554)
T 1yuw_A 346 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQT 425 (554)
T ss_dssp HHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEE
T ss_pred HHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEEEEEecCceEEEEEECCCccCceeE
Confidence 999999999778888899999999999999999999865566788999999999999999999999999999998863
Q ss_pred -------cccc-eeeeeeecC---------CCcc-------cCCCCccc-------ccceeeeee---------eEEEEe
Q psy5547 638 -------DEVT-ASISMLTGY---------PGLC-------LPSGSQLV-------REDKINITK---------TVIFVS 677 (714)
Q Consensus 638 -------d~~t-~~i~~~~~y---------~g~~-------~p~g~~~~-------~~~~l~~~~---------~~~~~~ 677 (714)
|+++ ..+.++.|- .|.| .|+|.+.+ .|+.|+++. .+++++
T Consensus 426 ~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~~~i~~ 505 (554)
T 1yuw_A 426 QTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITN 505 (554)
T ss_dssp EEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECC
T ss_pred EEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEccCceEEEEEEeccCCCceeEEEec
Confidence 3333 456666541 1222 35566655 778888543 688888
Q ss_pred ccccccHHHHHHHHHHhhhhhhhhhhhhhh
Q psy5547 678 CSQRRCIERYVEMIAIAGRCTRHRRMRYQK 707 (714)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (714)
+.++||+++|++|+++++++++++|.+.+.
T Consensus 506 ~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~ 535 (554)
T 1yuw_A 506 DKGRLSKEDIERMVQEAEKYKAEDEKQRDK 535 (554)
T ss_dssp CSSCSCHHHHHHHHHHHHHTTTHHHHHTTS
T ss_pred CCCCCCHHHHHHHHHHHHHhhhccHHHHHH
Confidence 889999999999999999999987765543
No 3
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.6e-56 Score=511.80 Aligned_cols=383 Identities=29% Similarity=0.446 Sum_probs=334.6
Q ss_pred CCCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccCC
Q psy5547 321 PGPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGS 400 (714)
Q Consensus 321 ~~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~ 400 (714)
..++|++|+++||++|++.++.++|.++.++|||||++|++.||+++++|++.||++++++++||+|||++|+.......
T Consensus 111 ~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~ 190 (675)
T 3d2f_A 111 HVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLP 190 (675)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCC
T ss_pred ceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999987642100
Q ss_pred CCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHH
Q psy5547 401 AAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTA 480 (714)
Q Consensus 401 ~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 480 (714)
.....+.+++|||+||||||+|++++.++.++++++.|+..+||.+||+.|++|+.++|..+++.+...+++.+.+|+.+
T Consensus 191 ~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~ 270 (675)
T 3d2f_A 191 EGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTA 270 (675)
T ss_dssp CSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHH
T ss_pred cccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 00125789999999999999999999999999999999999999999999999999999988888888889999999999
Q ss_pred HHHHhHhcCCCCeeEEEEecccCCceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHH
Q psy5547 481 CERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 560 (714)
Q Consensus 481 ~e~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l 560 (714)
||++|+.||......+.++.+.+|.++.+.|||++|++++.++++++..+|+++|+++++...+|+.|+||||+|++|+|
T Consensus 271 aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v 350 (675)
T 3d2f_A 271 AEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTL 350 (675)
T ss_dssp HHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHH
T ss_pred HHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHH
Confidence 99999999988888899988888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCCCcccccceEEEEeecceeEEEEeCC----eeEEeeCCCCCccc
Q psy5547 561 QKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGG----FELTSIPPATSRLC 636 (714)
Q Consensus 561 ~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~~~~~~v~~~sigi~~~~g----~~~~~i~~~t~~~~ 636 (714)
+++|++.| +.++..+.||++|||+|||++|+.+++. ++++++.+.|++|+||||++.+| .+.++||+||++|+
T Consensus 351 ~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~~--~~v~~~~l~Dv~p~slgi~~~~~~~~~~~~~li~rnt~iP~ 427 (675)
T 3d2f_A 351 KQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPT--LRVRPFKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPS 427 (675)
T ss_dssp HHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCSS--CCCCCCEEEEEECSCEEEEECCTTCSCSEEEEECTTEEESE
T ss_pred HHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCCC--CcccceEEEeeeecceEeeecCCCCCcceEEEEcCCCCCCc
Confidence 99999999 6788889999999999999999999986 45788999999999999999887 49999999999987
Q ss_pred ccccc------eeeee-eec----------CCCcc----c---CCCCc-cc-------ccceeeeee-------------
Q psy5547 637 LDEVT------ASISM-LTG----------YPGLC----L---PSGSQ-LV-------REDKINITK------------- 671 (714)
Q Consensus 637 ~d~~t------~~i~~-~~~----------y~g~~----~---p~g~~-~~-------~~~~l~~~~------------- 671 (714)
....+ ..+.+ +.| +.|.| + |+|.+ .+ .||.|+++.
T Consensus 428 ~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~ 507 (675)
T 3d2f_A 428 TKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDT 507 (675)
T ss_dssp EEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEEEEEEEECTTSCEEEEEEEEECC------C
T ss_pred ccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceEEEEEEEcCCCcEEEEEEEEeecccccccc
Confidence 53222 11111 211 11222 2 45543 33 788887655
Q ss_pred ------eEEEEeccccccHHHHHHHHHHhhhhhhhhhhhhh
Q psy5547 672 ------TVIFVSCSQRRCIERYVEMIAIAGRCTRHRRMRYQ 706 (714)
Q Consensus 672 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 706 (714)
.+++++..++||+++|++|++++++++.++|.+-+
T Consensus 508 ~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~ 548 (675)
T 3d2f_A 508 KTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAE 548 (675)
T ss_dssp CCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHH
Confidence 47788877799999999999999999997766543
No 4
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=4.5e-57 Score=513.18 Aligned_cols=372 Identities=48% Similarity=0.734 Sum_probs=331.9
Q ss_pred CCCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccCC
Q psy5547 321 PGPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGS 400 (714)
Q Consensus 321 ~~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~ 400 (714)
..++|++|++++|++|++.++.++|.++.++|||||++|++.||+++++|++.||++++++++||+|||++|+.+..
T Consensus 108 ~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~--- 184 (605)
T 2kho_A 108 QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG--- 184 (605)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSS---
T ss_pred EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHhhhccc---
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCcEEEEEEeCCceEEEEEEEEe----CCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHH
Q psy5547 401 AAGSGERNVLIFDLGGGTFDVSILTIE----DGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRR 476 (714)
Q Consensus 401 ~~~~~~~~vlVvD~GggT~Dvsv~~~~----~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 476 (714)
..+.+++|||+||||||+|++++. ++.++++++.|+..+||.+||+.|++|+.++|+.+++.+...+++.+.+
T Consensus 185 ---~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 261 (605)
T 2kho_A 185 ---TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQR 261 (605)
T ss_dssp ---SSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHH
T ss_pred ---CCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHH
Confidence 146889999999999999999998 7899999999999999999999999999999998888888888999999
Q ss_pred HHHHHHHHhHhcCCCCeeEEEEecccC---C-ceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEc
Q psy5547 477 LRTACERAKRTLSSSTQASIEIDSLFE---G-VDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVG 552 (714)
Q Consensus 477 l~~~~e~~K~~ls~~~~~~i~i~~~~~---~-~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvG 552 (714)
|+.+||++|+.||......+.++.+.+ | .++...|||++|++++.++++++..+|+++|+++++...+|+.|+|||
T Consensus 262 L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvG 341 (605)
T 2kho_A 262 LKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVG 341 (605)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEES
T ss_pred HHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEEC
Confidence 999999999999998888888876554 2 466789999999999999999999999999999999989999999999
Q ss_pred CCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCCCcccccceEEEEeecceeEEEEeCCeeEEeeCCCC
Q psy5547 553 GSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGFELTSIPPAT 632 (714)
Q Consensus 553 G~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~~~~~~v~~~sigi~~~~g~~~~~i~~~t 632 (714)
|+|++|+|+++|++.| +.++..+.||++|||+|||++|+.++|. ++++.+.|++|+|||+++.+|.|.++||+||
T Consensus 342 G~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~l~dv~p~slgi~~~~g~~~~li~r~t 416 (605)
T 2kho_A 342 GQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNT 416 (605)
T ss_dssp GGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCCCSBCCCCCEEEEETTTEEEEEECTTB
T ss_pred CcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCceEEeeeeeeccccccCCceEEEEeccc
Confidence 9999999999999999 6788889999999999999999999875 5678899999999999999999999999999
Q ss_pred Ccccc---------cccc-eeeeeeecC---------CCcc-------cCCCCccc-------ccceeeeee--------
Q psy5547 633 SRLCL---------DEVT-ASISMLTGY---------PGLC-------LPSGSQLV-------REDKINITK-------- 671 (714)
Q Consensus 633 ~~~~~---------d~~t-~~i~~~~~y---------~g~~-------~p~g~~~~-------~~~~l~~~~-------- 671 (714)
++|+. |+++ ..+.++.|- .|.| .|+|.+.+ .|+.|+++.
T Consensus 417 ~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~ 496 (605)
T 2kho_A 417 TIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKE 496 (605)
T ss_dssp CSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEECTTSCEEEEEEETTTCCE
T ss_pred ccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEcCCCceeEEEEEcCCCce
Confidence 98863 4443 566666551 1222 45676655 788888543
Q ss_pred -eEEEEeccccccHHHHHHHHHHhhhhhhhhhhh
Q psy5547 672 -TVIFVSCSQRRCIERYVEMIAIAGRCTRHRRMR 704 (714)
Q Consensus 672 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (714)
.++++++ ++||+++|++|+++|++++++++.+
T Consensus 497 ~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~ 529 (605)
T 2kho_A 497 QKITIKAS-SGLNEDEIQKMVRDAEANAEADRKF 529 (605)
T ss_dssp EEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHH
T ss_pred eecccccc-cCCCHHHHHHHHHHHHHHHHhHHHH
Confidence 6777776 8899999999999999999977654
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=4e-55 Score=489.02 Aligned_cols=374 Identities=48% Similarity=0.732 Sum_probs=332.2
Q ss_pred CCCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccCC
Q psy5547 321 PGPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGS 400 (714)
Q Consensus 321 ~~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~ 400 (714)
..++|+++++++|++|++.++.+++.++..+|||||++|++.||++|++|++.||++.+++++||+|||++|+.+..
T Consensus 82 ~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~AGl~~~~li~Ep~AAAlay~~~~~--- 158 (509)
T 2v7y_A 82 KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKE--- 158 (509)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTGGGS---
T ss_pred EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHHHhhccC---
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHH
Q psy5547 401 AAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTA 480 (714)
Q Consensus 401 ~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 480 (714)
.+.+++|||+||||||++++++.++.++++++.|+..+||.+||+.|++++.++|..+++.+...+++.+.+|+.+
T Consensus 159 ----~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 234 (509)
T 2v7y_A 159 ----EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDA 234 (509)
T ss_dssp ----CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHHH
T ss_pred ----CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHH
Confidence 5789999999999999999999989999999999999999999999999999999988888888888899999999
Q ss_pred HHHHhHhcCCCCeeEEEEecccC---C-ceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCC
Q psy5547 481 CERAKRTLSSSTQASIEIDSLFE---G-VDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTR 556 (714)
Q Consensus 481 ~e~~K~~ls~~~~~~i~i~~~~~---~-~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ 556 (714)
||++|+.|+......+.++.+.+ | .++.+.|+|++|+++++++++++...|+++|+++++...+|+.|+|+||+|+
T Consensus 235 aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~ 314 (509)
T 2v7y_A 235 AEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTR 314 (509)
T ss_dssp HHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGG
T ss_pred HHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCccc
Confidence 99999999998888888876543 2 3567899999999999999999999999999999999899999999999999
Q ss_pred cHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCCCcccccceEEEEeecceeEEEEeCCeeEEeeCCCCCccc
Q psy5547 557 IPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGFELTSIPPATSRLC 636 (714)
Q Consensus 557 ~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~~~~~~v~~~sigi~~~~g~~~~~i~~~t~~~~ 636 (714)
+|+|+++|++.| +.++..+.||++|||+|||++|+.+++. ++++.+.|++|+|||+++.+|.|.++||+|+++|+
T Consensus 315 ~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p~slgi~~~~~~~~~li~~~~~iP~ 389 (509)
T 2v7y_A 315 IPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPT 389 (509)
T ss_dssp CHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBCSSEEEEEETTTEEEEEECTTCBSSE
T ss_pred ChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEeeccccceeecCCceEEEEeCCCcCCc
Confidence 999999999999 6778889999999999999999999876 56788999999999999999999999999999886
Q ss_pred c---------cccc-eeeeeeecC---------CCcc-------cCCCCccc-------ccceeeeee---------eEE
Q psy5547 637 L---------DEVT-ASISMLTGY---------PGLC-------LPSGSQLV-------REDKINITK---------TVI 674 (714)
Q Consensus 637 ~---------d~~t-~~i~~~~~y---------~g~~-------~p~g~~~~-------~~~~l~~~~---------~~~ 674 (714)
. |+++ ..+.++.|- .|.| .|+|.+.+ .|+.|+++. .++
T Consensus 390 ~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~~g~~~~~~ 469 (509)
T 2v7y_A 390 SKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSIT 469 (509)
T ss_dssp EEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEE
T ss_pred ceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEEEEEEcCCCcEEEEE
Confidence 3 3443 456666541 1222 35566655 688887543 677
Q ss_pred EEeccccccHHHHHHHHHHhhhhhhhhhhhhhh
Q psy5547 675 FVSCSQRRCIERYVEMIAIAGRCTRHRRMRYQK 707 (714)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (714)
++++ ++||+++|++|++++++++++++.+.++
T Consensus 470 i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~ 501 (509)
T 2v7y_A 470 IKSS-SGLSEEEIQRMIKEAEENAEADRKRKEA 501 (509)
T ss_dssp ECSS-CSCCSHHHHHHHHHHHHSCGGGGGGGGC
T ss_pred EEec-CCCCHHHHHHHHHHHHHhhhccHHHHHH
Confidence 7776 7899999999999999999988876654
No 6
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=6.9e-45 Score=413.12 Aligned_cols=288 Identities=48% Similarity=0.754 Sum_probs=273.3
Q ss_pred CchHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhCCCcccccceee
Q psy5547 1 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLL 80 (714)
Q Consensus 1 i~~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~~~~~~v~~~~~ 80 (714)
+++|+++|+++++++++|+.|+||||+||||+||+.|+++| +.++..++|||||||+|||++|+.+++. ++++++
T Consensus 317 ~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l 391 (605)
T 4b9q_A 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLL 391 (605)
T ss_dssp THHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEE
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEE
Confidence 46899999999999999999999999999999999999999 5778899999999999999999999764 578999
Q ss_pred eeeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCCCCCCcce
Q psy5547 81 LDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQ 160 (714)
Q Consensus 81 ~dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~~~~g~~~ 160 (714)
.|++|+++|++..+|.+.++|++|+++|++++.+|++..|+|+.+.+.+|||++..+.+|..||+|.+.++|+.+.|.++
T Consensus 392 ~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~ 471 (605)
T 4b9q_A 392 LDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQ 471 (605)
T ss_dssp ECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCC
T ss_pred EeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCeeEEEEEeecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHhhhccc
Q psy5547 161 IEVTFDIDANGILNVSAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVITAKNSLESYCFNMKSTM 240 (714)
Q Consensus 161 i~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~arN~LEs~iy~~r~~L 240 (714)
|+|+|.+|.||+|+|++.++.+|++..+++.+. ..|+++|++++.++++++..+|+..+++.++||+||+|+|+++..|
T Consensus 472 i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~ 550 (605)
T 4b9q_A 472 IEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQV 550 (605)
T ss_dssp EEEEEEECTTSCEEEEEEETTTCCEECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCcEEEEEEEecCCCcEEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999876 4699999999999999999999999999999999999999999999
Q ss_pred cchhhhccCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhHHHHHHHh
Q psy5547 241 EDEKLKDKISSAERTQILDKCNDVIKWLDSNQLAEKEEFEDKQKELEAICNPIITKLYQ 299 (714)
Q Consensus 241 ~~~~~~~~~s~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~k~~eL~~~~~~i~~r~~~ 299 (714)
++ +..++++++++++..+++++++||+.+ +.++|++++++|++.+.|+..++++
T Consensus 551 ~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 551 EE--AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HH--HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred Hh--hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 64 788999999999999999999999876 4889999999999999999998865
No 7
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2.2e-45 Score=419.93 Aligned_cols=301 Identities=21% Similarity=0.346 Sum_probs=274.4
Q ss_pred CchHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhCCCcccccceee
Q psy5547 1 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLL 80 (714)
Q Consensus 1 i~~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~~~~~~v~~~~~ 80 (714)
+++|+++|+++++++++|+.|+||||+||||.||+.|+++|| .++..++|||+|||+|||++|+.|+ +.++++++.+
T Consensus 318 ~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg-~~~~~~~nPdeaVA~GAa~~a~~ls--~~~~v~~~~l 394 (675)
T 3d2f_A 318 TEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFG-KPLSTTLNQDEAIAKGAAFICAIHS--PTLRVRPFKF 394 (675)
T ss_dssp THHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHT-SCEECCSCTTTHHHHHHHHHHHHTC--SSCCCCCCEE
T ss_pred HHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcC-CCccccCCcchHHHHHHHHHHHHhC--CCCcccceEE
Confidence 468999999999999999999999999999999999999994 6788999999999999999999994 4567899999
Q ss_pred eeeceeeeEEEEcCC----eEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEE-eeccccccc-cCcceeEEEEecCCCC
Q psy5547 81 LDVTPLSLGIETAGG----VMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQV-YEGERAMTK-DNNLLGKFELTSIPPA 154 (714)
Q Consensus 81 ~dv~~~~i~~~~~~~----~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v-~eg~~~~~~-~~~~i~~~~i~~~~~~ 154 (714)
.|++|+++|+++.++ .+.+||++|+++|++++.+|++..+++ +.+ |+|++..+. +|..||+|.+.++|+.
T Consensus 395 ~Dv~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~----~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~ 470 (675)
T 3d2f_A 395 EDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS----MAASYTDITQLPPNTPEQIANWEITGVQLP 470 (675)
T ss_dssp EEEECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE----EEEEESCGGGSCTTCCSEEEEEEEECCCCC
T ss_pred EeeeecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce----EEEEEcCCcccccccCceeeEEEecCcCCC
Confidence 999999999999876 499999999999999999998765543 333 678888776 8999999999999999
Q ss_pred CCCcc-eEEEEEEecCCeeEEEEEe----------ecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHH
Q psy5547 155 PRGVP-QIEVTFDIDANGILNVSAI----------EKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVI 223 (714)
Q Consensus 155 ~~g~~-~i~v~~~~d~~G~l~v~~~----------~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~ 223 (714)
+.|.+ +|+|+|.+|.||+|+|++. ++.+++...+++.+...+||+++++++.++++++..+|+.++++.
T Consensus 471 ~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~ 550 (675)
T 3d2f_A 471 EGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETE 550 (675)
T ss_dssp SSCSCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 99874 8999999999999999995 677888888888876668999999999999999999999999999
Q ss_pred HHHhhHHHHHHhhhccccchhhhccCCHHHHHHHHHHHHHHHHHhhc-CCccCHHHHHHHHHHHHHhhhHHHHHHHhcCC
Q psy5547 224 TAKNSLESYCFNMKSTMEDEKLKDKISSAERTQILDKCNDVIKWLDS-NQLAEKEEFEDKQKELEAICNPIITKLYQAGG 302 (714)
Q Consensus 224 ~arN~LEs~iy~~r~~L~~~~~~~~~s~~e~~~l~~~l~e~~~WL~~-~~~a~~~~~~~k~~eL~~~~~~i~~r~~~~~~ 302 (714)
+++|+||+|+|++|+.|.+ .+..++++++++++.+.++++++||++ +.++++++|++|+++|+++++||..|+.+...
T Consensus 551 ~~~n~le~~i~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~ 629 (675)
T 3d2f_A 551 DRKNTLEEYIYTLRGKLEE-EYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEE 629 (675)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999975 488999999999999999999999965 45788999999999999999999999999999
Q ss_pred CCCCCCC
Q psy5547 303 APGGFPG 309 (714)
Q Consensus 303 rp~~~~~ 309 (714)
||.+++.
T Consensus 630 rp~~~~~ 636 (675)
T 3d2f_A 630 EKKQAIR 636 (675)
T ss_dssp HHHHHHC
T ss_pred ChHHHHH
Confidence 9988775
No 8
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=2.5e-44 Score=408.57 Aligned_cols=288 Identities=48% Similarity=0.753 Sum_probs=273.3
Q ss_pred CchHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhCCCcccccceee
Q psy5547 1 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLL 80 (714)
Q Consensus 1 i~~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~~~~~~v~~~~~ 80 (714)
+++|+++|+++++++++|+.|+||||+||||.||+.|+++| +.++..++|||||||+|||++|+.+++. ++++.+
T Consensus 317 ~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~l 391 (605)
T 2kho_A 317 IEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLL 391 (605)
T ss_dssp TSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCCC
T ss_pred HHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCceE
Confidence 46899999999999999999999999999999999999999 5678899999999999999999998654 578999
Q ss_pred eeeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCCCCCCcce
Q psy5547 81 LDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQ 160 (714)
Q Consensus 81 ~dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~~~~g~~~ 160 (714)
.|++|+++|++..++.+.++|++|+++|++++..|++..++|+.+.+.+|||++..+.+|..||+|.+.++|+.+.|.++
T Consensus 392 ~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~ 471 (605)
T 2kho_A 392 LDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQ 471 (605)
T ss_dssp SBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSC
T ss_pred EeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCeeEEEEEeecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHhhhccc
Q psy5547 161 IEVTFDIDANGILNVSAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVITAKNSLESYCFNMKSTM 240 (714)
Q Consensus 161 i~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~arN~LEs~iy~~r~~L 240 (714)
|+|+|.+|.||+|+|++.++.+|+...+++.+. ..|++++++++.++++++..+|+..+++.+++|+||+|+|++|+.|
T Consensus 472 i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 550 (605)
T 2kho_A 472 IEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQV 550 (605)
T ss_dssp EEEEEEECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcCCCceeEEEEEcCCCceeecccccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887 7799999999999999999999999999999999999999999999
Q ss_pred cchhhhccCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhHHHHHHHh
Q psy5547 241 EDEKLKDKISSAERTQILDKCNDVIKWLDSNQLAEKEEFEDKQKELEAICNPIITKLYQ 299 (714)
Q Consensus 241 ~~~~~~~~~s~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~k~~eL~~~~~~i~~r~~~ 299 (714)
++ +..++++++++++.++++++++||+++ +.++|++++++|++.++||..|+++
T Consensus 551 ~~--~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 551 EE--AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HH--HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred Hh--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 65 888999999999999999999999854 7899999999999999999999864
No 9
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=6.1e-44 Score=389.29 Aligned_cols=273 Identities=86% Similarity=1.206 Sum_probs=257.5
Q ss_pred CCCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccCC
Q psy5547 321 PGPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGS 400 (714)
Q Consensus 321 ~~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~ 400 (714)
..++|+++++++|++|++.++.+++.++.++|||||++|++.||++|++|++.||++.+.+++||+|||++|+......
T Consensus 131 ~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~- 209 (404)
T 3i33_A 131 KTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGC- 209 (404)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCS-
T ss_pred eEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccc-
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999998764311
Q ss_pred CCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHH
Q psy5547 401 AAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTA 480 (714)
Q Consensus 401 ~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 480 (714)
...+..++|||+||||+|++++++.++.+++++..++..+||.+||+.|.+++.+++..+++.+...+++.+.+|+..
T Consensus 210 --~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 287 (404)
T 3i33_A 210 --AGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTA 287 (404)
T ss_dssp --SSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHH
T ss_pred --cCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHH
Confidence 124688999999999999999999999999999999999999999999999999999998888888889999999999
Q ss_pred HHHHhHhcCCCCeeEEEEecccCCceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHH
Q psy5547 481 CERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 560 (714)
Q Consensus 481 ~e~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l 560 (714)
||++|+.|+......+.++.+.++.++...++|++|++++.++++++.+.|.++|+.++....+|+.|+|+||+|++|+|
T Consensus 288 ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l 367 (404)
T 3i33_A 288 CERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKI 367 (404)
T ss_dssp HHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHH
T ss_pred HHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHH
Confidence 99999999999999999988888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhC
Q psy5547 561 QKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 596 (714)
Q Consensus 561 ~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 596 (714)
+++|++.|++.++..+.||+++||.|||++|+.++|
T Consensus 368 ~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 368 QKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 999999998888999999999999999999999875
No 10
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=4.9e-44 Score=390.45 Aligned_cols=275 Identities=32% Similarity=0.585 Sum_probs=253.4
Q ss_pred CCCCCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhccccc
Q psy5547 319 AGPGPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKV 398 (714)
Q Consensus 319 ~~~~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~ 398 (714)
.+..++|++|+++||++|+++++.+++.++.++|||||++|++.||++|++|++.||++++.+++||+|||++|+....
T Consensus 121 ~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~- 199 (409)
T 4gni_A 121 EPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPE- 199 (409)
T ss_dssp CCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC----
T ss_pred cceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccc-
Confidence 4568999999999999999999999999999999999999999999999999999999999999999999999987631
Q ss_pred CCCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhc--cCccccHHHHHH
Q psy5547 399 GSAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYK--KDLTTNKRALRR 476 (714)
Q Consensus 399 ~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~--~~~~~~~~~~~~ 476 (714)
....+..++|||+||||||++++++.++.++++++.++..+||.+||+.|++++.++|..+++ .+...+++.+.+
T Consensus 200 ---~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 276 (409)
T 4gni_A 200 ---ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAK 276 (409)
T ss_dssp ------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHH
T ss_pred ---cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHH
Confidence 112678999999999999999999999999999999999999999999999999999998887 777788899999
Q ss_pred HHHHHHHHhHhcCCCCeeEEEEecccCCceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCC
Q psy5547 477 LRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTR 556 (714)
Q Consensus 477 l~~~~e~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~ 556 (714)
|+.+||++|+.|+......+.++.+.++.++...|+|++|+++++++++++..+|+++|+.+++...+|+.|+|+||+|+
T Consensus 277 l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ 356 (409)
T 4gni_A 277 LRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSN 356 (409)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGG
T ss_pred HHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccc
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHcCCC-cc------cCCCCCchhhHhhHHHHHHHHhCC
Q psy5547 557 IPKVQKLLQDFFNGK-EL------NKSINPDEAVAYGAAVQAAILHGD 597 (714)
Q Consensus 557 ~p~l~~~l~~~f~~~-~v------~~~~~p~~ava~GAa~~a~~l~~~ 597 (714)
+|+|++.|++.|+.. .+ ....||++|||+|||++|+.....
T Consensus 357 ~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 357 TPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp CHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred cHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 999999999999544 34 577899999999999999987643
No 11
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=5e-43 Score=381.03 Aligned_cols=270 Identities=61% Similarity=0.985 Sum_probs=256.2
Q ss_pred CCCCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccC
Q psy5547 320 GPGPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVG 399 (714)
Q Consensus 320 ~~~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~ 399 (714)
...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++.||++.+.+++||+|||++|+....
T Consensus 125 ~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~-- 202 (394)
T 3qfu_A 125 KKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKS-- 202 (394)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSC--
T ss_pred ceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccC--
Confidence 357899999999999999999999999999999999999999999999999999999999999999999999976543
Q ss_pred CCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHH
Q psy5547 400 SAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRT 479 (714)
Q Consensus 400 ~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 479 (714)
..+.+++|||+||||||++++++.++.+++.+..++..+||.+||+.|.+++.+++..+++.+...++..+.+|+.
T Consensus 203 ----~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 278 (394)
T 3qfu_A 203 ----DKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKR 278 (394)
T ss_dssp ----SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHH
T ss_pred ----CCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHH
Confidence 1578999999999999999999999999999999999999999999999999999999998888888999999999
Q ss_pred HHHHHhHhcCCCCeeEEEEecccCCceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHH
Q psy5547 480 ACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 559 (714)
Q Consensus 480 ~~e~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~ 559 (714)
+||++|+.|+......+.++.+.++.++...++|++|+++++++++++.+.|.++|+.++....+++.|+|+||+|++|+
T Consensus 279 ~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~ 358 (394)
T 3qfu_A 279 EAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPK 358 (394)
T ss_dssp HHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHH
T ss_pred HHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHH
Confidence 99999999999999999998888899999999999999999999999999999999999999899999999999999999
Q ss_pred HHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHh
Q psy5547 560 VQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 595 (714)
Q Consensus 560 l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~ 595 (714)
|+++|++.|++.++..+.||+++||.|||++|+.++
T Consensus 359 l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 359 VQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999999888899999999999999999999774
No 12
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=2.6e-41 Score=365.81 Aligned_cols=267 Identities=54% Similarity=0.844 Sum_probs=243.1
Q ss_pred CCCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccCC
Q psy5547 321 PGPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGS 400 (714)
Q Consensus 321 ~~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~ 400 (714)
..++|+++++++|++|+++++.+++.++.++|||||++|++.||+++++|++.||++.+.+++||+|||++|+.+..
T Consensus 108 ~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--- 184 (383)
T 1dkg_D 108 QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG--- 184 (383)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHHHTCCC----
T ss_pred EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHHHhccC---
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCcEEEEEEeCCceEEEEEEEEe----CCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHH
Q psy5547 401 AAGSGERNVLIFDLGGGTFDVSILTIE----DGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRR 476 (714)
Q Consensus 401 ~~~~~~~~vlVvD~GggT~Dvsv~~~~----~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 476 (714)
..+.+++|||+||||||+++++.. ++.++++++.++..+||.+||+.|.+++.+++..+++.+...++..+.+
T Consensus 185 ---~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 261 (383)
T 1dkg_D 185 ---TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQR 261 (383)
T ss_dssp ---CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHH
T ss_pred ---CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHH
Confidence 146789999999999999999997 5678888888889999999999999999999988888777778888999
Q ss_pred HHHHHHHHhHhcCCCCeeEEEEecccC---C-ceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEc
Q psy5547 477 LRTACERAKRTLSSSTQASIEIDSLFE---G-VDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVG 552 (714)
Q Consensus 477 l~~~~e~~K~~ls~~~~~~i~i~~~~~---~-~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvG 552 (714)
|+..||++|+.|+......+.++.+.+ | .++.+.|+|++|++++++.++++.+.+.++|+.+++...+++.|+|+|
T Consensus 262 l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~G 341 (383)
T 1dkg_D 262 LKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVG 341 (383)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEES
T ss_pred HHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEec
Confidence 999999999999998888887765443 2 456679999999999999999999999999999998888999999999
Q ss_pred CCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHH
Q psy5547 553 GSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 594 (714)
Q Consensus 553 G~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l 594 (714)
|+|++|+|+++|++.| +.++..+.||+++||+|||++|+.|
T Consensus 342 G~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l 382 (383)
T 1dkg_D 342 GQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVL 382 (383)
T ss_dssp GGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTT
T ss_pred CccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhh
Confidence 9999999999999999 6778889999999999999999765
No 13
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=4.8e-38 Score=353.61 Aligned_cols=240 Identities=90% Similarity=1.269 Sum_probs=229.0
Q ss_pred CchHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhCCCcccccceee
Q psy5547 1 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLL 80 (714)
Q Consensus 1 i~~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~~~~~~v~~~~~ 80 (714)
+++|+++|+++++++++|+.|+||||+||+|.||+.|+++|++.++..++|||+|||+|||++|+.+++...++++++.+
T Consensus 314 ~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~ 393 (554)
T 1yuw_A 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393 (554)
T ss_dssp THHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCC
T ss_pred HHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEE
Confidence 36899999999999999999999999999999999999999778888999999999999999999997654567889999
Q ss_pred eeeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCCCCCCcce
Q psy5547 81 LDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQ 160 (714)
Q Consensus 81 ~dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~~~~g~~~ 160 (714)
.|++|+++|++..++.+.++|++|+++|.+++..|++..++|+.+.+.+|||++..+.+|..||+|.+.++|+.+.|.++
T Consensus 394 ~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~ 473 (554)
T 1yuw_A 394 LDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 473 (554)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCC
T ss_pred EEeeeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCeeEEEEEeecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHhhhccc
Q psy5547 161 IEVTFDIDANGILNVSAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVITAKNSLESYCFNMKSTM 240 (714)
Q Consensus 161 i~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~arN~LEs~iy~~r~~L 240 (714)
|+|+|.+|.||+|+|++.++.+|+...+++.+..+.|++++++++.++++++..+|+..+++.+++|+||+|+|++|+.|
T Consensus 474 i~v~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 474 IEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred EEEEEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999988777899999999999999999999999999999999999999999987
No 14
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=9.2e-36 Score=290.70 Aligned_cols=216 Identities=46% Similarity=0.696 Sum_probs=205.8
Q ss_pred eeeeeeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCCCCCC
Q psy5547 78 LLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRG 157 (714)
Q Consensus 78 ~~~~dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~~~~g 157 (714)
+++.||+|+++|+++.+|.+.+|||+|+++|++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.++|++|+|
T Consensus 1 ~~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G 80 (219)
T 4e81_A 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG 80 (219)
T ss_dssp CCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTT
T ss_pred CeEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEEecCCeeEEEEEeecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHhhh
Q psy5547 158 VPQIEVTFDIDANGILNVSAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVITAKNSLESYCFNMK 237 (714)
Q Consensus 158 ~~~i~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~arN~LEs~iy~~r 237 (714)
.+.|+|+|.+|.||+|+|++.++.+|+...+++.+. ..|+++|++++.+.++++..+|+..+++.+++|.||+|+|.+|
T Consensus 81 ~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~ 159 (219)
T 4e81_A 81 MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTR 159 (219)
T ss_dssp CSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999876 4699999999999999999999999999999999999999999
Q ss_pred ccccchhhhccCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhHHHHHHHh
Q psy5547 238 STMEDEKLKDKISSAERTQILDKCNDVIKWLDSNQLAEKEEFEDKQKELEAICNPIITKLYQ 299 (714)
Q Consensus 238 ~~L~~~~~~~~~s~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~k~~eL~~~~~~i~~r~~~ 299 (714)
..|.+ +..++++++++.+.+.+.++++||+++ +.++|+.++++|++.+.||..|+++
T Consensus 160 ~~l~~--~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 160 KQVEE--AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHH--HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHH--hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99975 788999999999999999999999876 6889999999999999999999877
No 15
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=2.3e-33 Score=276.89 Aligned_cols=213 Identities=33% Similarity=0.531 Sum_probs=202.5
Q ss_pred eeeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCCCCCCcce
Q psy5547 81 LDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQ 160 (714)
Q Consensus 81 ~dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~~~~g~~~ 160 (714)
.|++|+++|+++.+|.+.+|||+|+++|++++.+|++..++|+.+.|.||||++..+.+|..||+|.|.++|+.++|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCeeEEEEEeecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHhhhccc
Q psy5547 161 IEVTFDIDANGILNVSAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVITAKNSLESYCFNMKSTM 240 (714)
Q Consensus 161 i~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~arN~LEs~iy~~r~~L 240 (714)
|+|+|.+|.||+|+|++.+..+|+...+++... ..|+++++.++.++++++..+|+..+++.+++|+||+|+|.+|+.|
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l 159 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL 159 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999877 4599999999999999999999999999999999999999999999
Q ss_pred cchhhhccCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhHHHHHHHh
Q psy5547 241 EDEKLKDKISSAERTQILDKCNDVIKWLDSNQLAEKEEFEDKQKELEAICNPIITKLYQ 299 (714)
Q Consensus 241 ~~~~~~~~~s~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~k~~eL~~~~~~i~~r~~~ 299 (714)
.+ +..++++++++++..+++++++||+++ +.++|+.++++|++++.||..|++.
T Consensus 160 ~~--~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~ 213 (227)
T 1u00_A 160 AA--DAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMD 213 (227)
T ss_dssp HH--HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 778999999999999999999999854 4889999999999999999998764
No 16
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=2.7e-34 Score=320.73 Aligned_cols=223 Identities=56% Similarity=0.861 Sum_probs=208.0
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhCCCcccccceeee
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLL 81 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~~~~~~v~~~~~~ 81 (714)
++|+++|+++++++++|+.|+||||+||+|.|++.|++.| +.++...+|||+|||+|||++|+.+++. ++++.+.
T Consensus 287 ~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~ 361 (509)
T 2v7y_A 287 GPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLL 361 (509)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCC
T ss_pred HHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEE
Confidence 5789999999999999999999999999999999999999 4678899999999999999999999764 5788999
Q ss_pred eeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCCCCCCcceE
Q psy5547 82 DVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQI 161 (714)
Q Consensus 82 dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~~~~g~~~i 161 (714)
|++|+++|++..++.+.++|++|+++|.+++..|++..++|+.+.+.+|||++..+.+|..+|++.+.++|+.++|.++|
T Consensus 362 dv~p~slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i 441 (509)
T 2v7y_A 362 DVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQI 441 (509)
T ss_dssp CBCSSEEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCE
T ss_pred EeeccccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCeeEEEEEeecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHH
Q psy5547 162 EVTFDIDANGILNVSAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVITAKNSLE 230 (714)
Q Consensus 162 ~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~arN~LE 230 (714)
+|+|++|.||+|+|++.+..+|+...+++.+. ..|++++++++.++++++..+|+..+++.+++|+||
T Consensus 442 ~v~f~id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 442 EVTFDIDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp EEEEEECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred EEEEEEcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999887 679999999999999999999999999999999986
No 17
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.98 E-value=6.2e-32 Score=287.78 Aligned_cols=241 Identities=24% Similarity=0.342 Sum_probs=193.5
Q ss_pred cchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccCCCCCC
Q psy5547 325 IEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSAAGS 404 (714)
Q Consensus 325 ~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~ 404 (714)
++++++++|++++.. ..++ ...+|||||++|+..||+++++|++.||++.+.+++||+|||++|+.+..
T Consensus 76 ~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~------- 144 (344)
T 1jce_A 76 ALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVE------- 144 (344)
T ss_dssp HHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHTTCCTT-------
T ss_pred HHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHHHHHhcCCCCC-------
Confidence 455555555554432 1233 47899999999999999999999999999999999999999999976532
Q ss_pred CCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHHHHHH
Q psy5547 405 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 484 (714)
Q Consensus 405 ~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~ 484 (714)
.+.+++|||+||||||+++++... .+ ..++..+||.+||+.|.+++.+++. .+.. ...||++
T Consensus 145 ~~~~~lVvDiGggttdvsv~~~~~-~~----~~~~~~lGG~~id~~l~~~l~~~~~----~~~~---------~~~ae~~ 206 (344)
T 1jce_A 145 EPSGNMVVDIGGGTTEVAVISLGS-IV----TWESIRIAGDEMDEAIVQYVRETYR----VAIG---------ERTAERV 206 (344)
T ss_dssp SSSCEEEEEECSSCEEEEEEETTE-EE----EEEEESCSHHHHHHHHHHHHHHHHC----EECC---------HHHHHHH
T ss_pred CCceEEEEEeCCCeEEEEEEEcCC-EE----eeCCCCccChhHHHHHHHHHHHHhC----cccC---------HHHHHHH
Confidence 467899999999999999998632 11 2356789999999999999987653 2111 3579999
Q ss_pred hHhcCCCCe------eEEEEe--cccCCceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCC--cccc-ceEEEEcC
Q psy5547 485 KRTLSSSTQ------ASIEID--SLFEGVDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMD--KAQI-HDIVLVGG 553 (714)
Q Consensus 485 K~~ls~~~~------~~i~i~--~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~--~~~i-~~ViLvGG 553 (714)
|+.++.... ..+.++ .+.+|.+..++|+|++|++++++.++++.+.|.++|+.++.. ...+ +.|+|+||
T Consensus 207 K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG 286 (344)
T 1jce_A 207 KIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGG 286 (344)
T ss_dssp HHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESG
T ss_pred HHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECc
Confidence 999986542 234443 344666778999999999999999999999999999987532 2234 68999999
Q ss_pred CCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHh
Q psy5547 554 STRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 595 (714)
Q Consensus 554 ~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~ 595 (714)
+|++|+|+++|++.| +.++..+.||+++||.||+++|+.++
T Consensus 287 ~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 287 GSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp GGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred cccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 999999999999999 66788888999999999999998654
No 18
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.6e-29 Score=238.02 Aligned_cols=166 Identities=58% Similarity=0.852 Sum_probs=155.0
Q ss_pred ccceeeeeeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCCC
Q psy5547 75 VQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPA 154 (714)
Q Consensus 75 v~~~~~~dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~~ 154 (714)
-..+.+.|++|+++|+++.+|.+.+|||+|+++|++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++|++
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceEEEEEEecCCeeEEEEEeecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHH
Q psy5547 155 PRGVPQIEVTFDIDANGILNVSAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVITAKNSLESYCF 234 (714)
Q Consensus 155 ~~g~~~i~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~arN~LEs~iy 234 (714)
++|.++|+|+|.+|.||+|+|++.++.+|++..+++.+. ..|+++|++++.++++++..+|+..+++.++||.||+|+|
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy 175 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIH 175 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988 8899999999999999999999999999999999999999
Q ss_pred hhhcccc
Q psy5547 235 NMKSTME 241 (714)
Q Consensus 235 ~~r~~L~ 241 (714)
.+|..|+
T Consensus 176 ~~~~~l~ 182 (182)
T 3n8e_A 176 DTETKME 182 (182)
T ss_dssp CCSCCCC
T ss_pred HHHHhhC
Confidence 9998873
No 19
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.95 E-value=7.2e-27 Score=214.53 Aligned_cols=151 Identities=69% Similarity=1.041 Sum_probs=145.9
Q ss_pred eeeeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCCCCCCcc
Q psy5547 80 LLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVP 159 (714)
Q Consensus 80 ~~dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~~~~g~~ 159 (714)
+.|++|+++|+++.+|.+.+|||+|+++|++++.+|++..|+|+.+.+.+|||++..+.+|..||+|.|.++|+.++|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCeeEEEEEeecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHH
Q psy5547 160 QIEVTFDIDANGILNVSAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVITAKNSLE 230 (714)
Q Consensus 160 ~i~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~arN~LE 230 (714)
+|+|+|.+|.||+|+|++.++.+|+...+++.+..+.|++++++++.+++++|..+|+..+++.++||.||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999887889999999999999999999999999999999875
No 20
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.94 E-value=5.4e-27 Score=214.86 Aligned_cols=151 Identities=70% Similarity=1.073 Sum_probs=141.3
Q ss_pred eeeeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCCCCCCcc
Q psy5547 80 LLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVP 159 (714)
Q Consensus 80 ~~dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~~~~g~~ 159 (714)
+.|++|+++|+++.+|.+.+||++|+++|++++.+|++..|+|+.+.+.+|||++..+.+|..||+|.|.++|+.++|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCeeEEEEEeecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHH
Q psy5547 160 QIEVTFDIDANGILNVSAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVITAKNSLE 230 (714)
Q Consensus 160 ~i~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~arN~LE 230 (714)
+|+|+|.+|.||+|+|++.++.+|+...+++.+..+.|++++++++.++++++..+|+..+++.+++|.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999888889999999999999999999999999999999875
No 21
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.94 E-value=8.8e-27 Score=213.19 Aligned_cols=150 Identities=61% Similarity=0.922 Sum_probs=142.7
Q ss_pred eeeeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCCCCCCcc
Q psy5547 80 LLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVP 159 (714)
Q Consensus 80 ~~dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~~~~g~~ 159 (714)
+.|++|+++|+++.+|.+.+|||+|+++|++++.+|++..|+|+.+.+.+|||++..+.+|..||+|.|.++|+.++|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCeeEEEEEeecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHH
Q psy5547 160 QIEVTFDIDANGILNVSAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVITAKNSLE 230 (714)
Q Consensus 160 ~i~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~arN~LE 230 (714)
+|+|+|.+|.||+|+|++.++.+|+...+++.+. ..|++++++++.++++++..+|+..+++.+++|.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988 789999999999999999999998888888888764
No 22
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.92 E-value=4.6e-25 Score=204.04 Aligned_cols=151 Identities=64% Similarity=0.974 Sum_probs=144.4
Q ss_pred eeeeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCCCCCCcc
Q psy5547 80 LLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVP 159 (714)
Q Consensus 80 ~~dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~~~~g~~ 159 (714)
+.|++|++||+++.++.+.+||++|+++|++++..|++..++|+.+.+.+|||++..+.+|..||+|.+.++|+.++|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCeeEEEEEeecccccccceeecCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHH
Q psy5547 160 QIEVTFDIDANGILNVSAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVITAKNSLE 230 (714)
Q Consensus 160 ~i~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~~~~ls~eei~~~~~~~~~~~~~D~~~~~~~~arN~LE 230 (714)
+|+|+|.+|.||+|+|++.+..+|+...+++.+..+.|++++++++.+++++|..+|+..+++.++||.||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999998877789999999999999999999999999999999875
No 23
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.91 E-value=2.2e-23 Score=214.14 Aligned_cols=202 Identities=21% Similarity=0.344 Sum_probs=172.2
Q ss_pred hhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccCCCCCCCC
Q psy5547 327 EVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSAAGSGE 406 (714)
Q Consensus 327 ev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~ 406 (714)
+....+|+++++.+..+.+.....+++|+|++|...+|+.++++++.+|++...++.||+|++++++..
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~----------- 139 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN----------- 139 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-----------
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-----------
Confidence 567889999999999888888899999999999999999999999999999999999999999988642
Q ss_pred cEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHHHHHHhH
Q psy5547 407 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKR 486 (714)
Q Consensus 407 ~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~ 486 (714)
..+|+|+||||||++++. ++... ......+||.+||+.+.+++.- -...++++|+
T Consensus 140 -~~~viDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~~-------------------~~~~ae~~k~ 194 (272)
T 3h1q_A 140 -DGIVVDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYKI-------------------PFEEAETIKK 194 (272)
T ss_dssp -SEEEEEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHTC-------------------CHHHHHHHHH
T ss_pred -CEEEEEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhCC-------------------CHHHHHHHHH
Confidence 249999999999999986 34322 3466899999999999887631 1246788888
Q ss_pred hcCCCCeeEEEEecccCCceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHH
Q psy5547 487 TLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQD 566 (714)
Q Consensus 487 ~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~ 566 (714)
.++ +++++++++.+.++++.+.+.+.++..+ +++.|+|+||++++|++++++++
T Consensus 195 ~~~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~ 248 (272)
T 3h1q_A 195 DFS----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSR 248 (272)
T ss_dssp SST----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHH
T ss_pred hcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHH
Confidence 875 5789999999999999999999988653 47899999999999999999999
Q ss_pred HcCCCcccCCCCCchhhHhhHHHHH
Q psy5547 567 FFNGKELNKSINPDEAVAYGAAVQA 591 (714)
Q Consensus 567 ~f~~~~v~~~~~p~~ava~GAa~~a 591 (714)
.| +.++..+.+|++++|.|||++|
T Consensus 249 ~l-~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 249 FL-GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HH-SSCCBCCSSGGGHHHHHHHTTC
T ss_pred Hh-CCCccccCChHHHHHHHHHhcC
Confidence 99 7888889999999999999864
No 24
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.88 E-value=5.4e-23 Score=217.68 Aligned_cols=230 Identities=17% Similarity=0.152 Sum_probs=169.8
Q ss_pred CCccchhhhHHHHHHHHHHHHHhCCCCCeEE--EeeCCCCCHHHHHHHHHHHHHc--------C------CCeeEeeech
Q psy5547 322 GPTIEEVSSMVLTKMKETAEAYLGKTVSNAV--ITVPAYFNDSQRQATKDSGTIA--------G------LNVLRIINEP 385 (714)
Q Consensus 322 ~~s~eev~a~~L~~l~~~~~~~~~~~~~~~v--itVPa~~~~~~r~~l~~A~~~A--------G------l~~~~li~Ep 385 (714)
.++++...++++..|+..++...+.+ .++| +|||++|+..||+++++++..+ | +..+.+++||
T Consensus 94 ~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep 172 (346)
T 2fsj_A 94 RLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQG 172 (346)
T ss_dssp CTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETT
T ss_pred cccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccH
Confidence 34557778888888876653222333 5799 9999999999999999998776 4 3568899999
Q ss_pred hHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhcc
Q psy5547 386 TAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK 465 (714)
Q Consensus 386 ~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~ 465 (714)
.|||++|. +... ......+++|||+||||||++++++.++. .+....++..+||.+|++.|.+++.+++. .
T Consensus 173 ~AAa~~~l-~~~~---~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g----~ 243 (346)
T 2fsj_A 173 VGAALYLL-NQGI---IEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKETG----F 243 (346)
T ss_dssp HHHHHHHH-HHTS---SCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHC----C
T ss_pred HHHHHHhh-cccc---ccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhC----C
Confidence 99999883 2110 01134689999999999999999986665 55555677899999999999988776653 2
Q ss_pred --CccccHHHHHHHHHHHHHHhHhcCCCCeeEEEEecccCCceeEEEecHHHH-HHHHHHHHhhhhhHHHHHHHHcCCCc
Q psy5547 466 --DLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARF-EELNADLFRGTMEPVEKSLRDAKMDK 542 (714)
Q Consensus 466 --~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~-~~~~~~~~~~i~~~i~~~l~~~~~~~ 542 (714)
... ...+| .. ..+.+ .|. .++++++ +++++++++++.+.+++.|+++ .
T Consensus 244 ~~~i~---------~~~~e-------~~--~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~ 294 (346)
T 2fsj_A 244 VVPFD---------LAQEA-------LS--HPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---V 294 (346)
T ss_dssp CCCHH---------HHHHH-------TT--SCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---G
T ss_pred CcCCC---------HHHHh-------cC--CeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---h
Confidence 111 01122 01 11222 222 3558899 9999999999999999999876 4
Q ss_pred cccceEEEEcCCCCcHHHHHHHHHHcCCCcc-cCCCCCchhhHhhHHHHHH
Q psy5547 543 AQIHDIVLVGGSTRIPKVQKLLQDFFNGKEL-NKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 543 ~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v-~~~~~p~~ava~GAa~~a~ 592 (714)
.+++.|+|+||++++ +++.|++.|+...+ ....||++|+|.|+..++.
T Consensus 295 ~~i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 295 DRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GGEEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred hcccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 578999999999999 99999999964322 2267999999999998764
No 25
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.87 E-value=1.7e-21 Score=210.66 Aligned_cols=197 Identities=15% Similarity=0.157 Sum_probs=154.3
Q ss_pred HHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCcc
Q psy5547 364 RQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 443 (714)
Q Consensus 364 r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lG 443 (714)
.+.+.+|++.|||++..++.||.|||++|+.+.. ++..++|+|+||||||+++++ ++.+.. .++.++|
T Consensus 170 v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~-------~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~G 237 (419)
T 4a2a_A 170 YEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE-------KDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVG 237 (419)
T ss_dssp HHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH-------HHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCC
T ss_pred HHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc-------ccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccH
Confidence 4578899999999999999999999998865432 356799999999999999987 454432 3457899
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHHHHHHhHhcCCC-----CeeEEEEecccCCceeEEEecHHHHHH
Q psy5547 444 GEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSS-----TQASIEIDSLFEGVDFYTSVTRARFEE 518 (714)
Q Consensus 444 G~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~-----~~~~i~i~~~~~~~~~~~~itr~~~~~ 518 (714)
|++||+.|...+.- ....||++|+.++.. ....+.++... ......+++++|.+
T Consensus 238 G~~it~dIa~~l~~-------------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~ 296 (419)
T 4a2a_A 238 MKHVIKDVSAVLDT-------------------SFEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSV 296 (419)
T ss_dssp HHHHHHHHHHHHTC-------------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHCC-------------------CHHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHH
Confidence 99999999875421 235899999988642 34456666543 24568899999999
Q ss_pred HHHHHHhhhhhHHHHHHHHcCC------CccccceEEEEcCCCCcHHHHHHHHHHcCCCccc--C-----C---------
Q psy5547 519 LNADLFRGTMEPVEKSLRDAKM------DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN--K-----S--------- 576 (714)
Q Consensus 519 ~~~~~~~~i~~~i~~~l~~~~~------~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~--~-----~--------- 576 (714)
++++.++++.+.|++.|+.++. ....++.|+|+||+|++|+|++++++.| +.++. . |
T Consensus 297 ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~~~~ 375 (419)
T 4a2a_A 297 IIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINADEV 375 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCcccc
Confidence 9999999999999999999987 3456899999999999999999999999 55443 2 1
Q ss_pred -CCCchhhHhhHHHHHHHH
Q psy5547 577 -INPDEAVAYGAAVQAAIL 594 (714)
Q Consensus 577 -~~p~~ava~GAa~~a~~l 594 (714)
.+|..+.+.|.+++++..
T Consensus 376 ~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 376 ANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp HTCGGGHHHHHTTCC----
T ss_pred cCCchHHHHHHHHHHHhhc
Confidence 489999999999888644
No 26
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.84 E-value=3.6e-21 Score=207.26 Aligned_cols=220 Identities=18% Similarity=0.207 Sum_probs=149.6
Q ss_pred CCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCH------------------HHHHHHHHHHHHcCCCeeEeee
Q psy5547 322 GPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFND------------------SQRQATKDSGTIAGLNVLRIIN 383 (714)
Q Consensus 322 ~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~------------------~~r~~l~~A~~~AGl~~~~li~ 383 (714)
..+++++.. .++..++++++.++.+++|++|..=.. ...+.+.+|++.||++...++.
T Consensus 97 ~v~~~el~~----~i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ 172 (377)
T 2ych_A 97 KMPLKEMEE----AVRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDV 172 (377)
T ss_dssp CCCHHHHHH----HHHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTSEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCHHHHHH----HHHHHHhhcCCCChhHceEEEEEeCCCCCCCCcceeEEEEEEecHHHHHHHHHHHHHCCCceEEEec
Confidence 355555543 234577888999999999999832111 1138899999999999999999
Q ss_pred chhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhh
Q psy5547 384 EPTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKY 463 (714)
Q Consensus 384 Ep~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~ 463 (714)
||.|||.+|+..... ..+..++|+|+||||||+++++. +... ..++..+||.+||+.|.+.+
T Consensus 173 ep~Aaa~~~~~~~~~-----~~~~~~~vvDiGggttdi~i~~~--g~~~---~~~~~~~GG~~i~~~i~~~~-------- 234 (377)
T 2ych_A 173 KPFAGLYPLEARLAE-----EPDRVFLVLDIGAESTSLVLLRG--DKPL---AVRVLTLSGKDFTEAIARSF-------- 234 (377)
T ss_dssp HHHHTTGGGHHHHHT-----STTCEEEEEEECSSCEEEEEEET--TEEE---EEEEESCSHHHHHHHHHHHT--------
T ss_pred chHHHHHHHHhhccc-----ccCCeEEEEEECCCcEEEEEEEC--CEEE---EEEeeechHHHHHHHHHHHh--------
Confidence 999999998643221 14567999999999999999973 3322 23557899999999998732
Q ss_pred ccCccccHHHHHHHHHHHHHHhHhcCCCCeeEEEEecccCCceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHc--CCC
Q psy5547 464 KKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNADLFRGTMEPVEKSLRDA--KMD 541 (714)
Q Consensus 464 ~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~--~~~ 541 (714)
+.+ ...||++|+.++..............-......++++++++++++.++++...|++.|+.. +..
T Consensus 235 ~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~ 303 (377)
T 2ych_A 235 NLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLE 303 (377)
T ss_dssp TCC-----------HHHHHHHHHHTC-------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 111 3478999998875432111100000001134578999999999999999999999999864 455
Q ss_pred ccccceEEEEcCCCCcHHHHHHHHHHcCCCcccC
Q psy5547 542 KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK 575 (714)
Q Consensus 542 ~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~ 575 (714)
...++.|+|+||++++|+|++.+++.| +.++..
T Consensus 304 ~~~~~~IvL~GG~s~~p~l~~~l~~~l-~~~v~~ 336 (377)
T 2ych_A 304 EASPEVGYLLGGGSKLRGLASLLTDTL-GVNLEP 336 (377)
T ss_dssp --CCSEEEEESGGGGSTTHHHHHHHHH-TSEEEE
T ss_pred CCCcCEEEEECccccchhHHHHHHHHh-CCCeEe
Confidence 667899999999999999999999999 555433
No 27
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.82 E-value=8.2e-20 Score=196.04 Aligned_cols=237 Identities=17% Similarity=0.214 Sum_probs=159.9
Q ss_pred HHHHHHHHH-HHhCCC--CCeEEEeeCCCCCHHHHHHHHHHH-HHcCCCeeEeeechhHHHHHhhcccccCCCCCCCCcE
Q psy5547 333 LTKMKETAE-AYLGKT--VSNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSAAGSGERN 408 (714)
Q Consensus 333 L~~l~~~~~-~~~~~~--~~~~vitVPa~~~~~~r~~l~~A~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~~ 408 (714)
++.+++++- +.++.. ...++||+|++++..+|+++.+++ +.+|++.+.+++||.|||++++. .+
T Consensus 82 ~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~------------~~ 149 (375)
T 2fxu_A 82 MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR------------TT 149 (375)
T ss_dssp HHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC------------SS
T ss_pred HHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC------------Ce
Confidence 344444443 344443 345999999999999999888865 77899999999999999999864 24
Q ss_pred EEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHHH-------
Q psy5547 409 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTAC------- 481 (714)
Q Consensus 409 vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~------- 481 (714)
.+|+|+||||||++.+. ++. .+....+..++||.++|+.|.+++..+. +............+++..+
T Consensus 150 ~lVvDiG~gtt~v~~v~--~G~-~~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~~~~e~iK~~~~~v~~~~ 223 (375)
T 2fxu_A 150 GIVLDSGDGVTHNVPIY--EGY-ALPHAIMRLDLAGRDLTDYLMKILTERG---YSFVTTAEREIVRDIKEKLCYVALDF 223 (375)
T ss_dssp EEEEEECSSCEEEEEEE--TTE-ECGGGCEEESCCHHHHHHHHHHHHHHHT---CCCCSHHHHHHHHHHHHHHCCCCSSH
T ss_pred EEEEEcCCCceEEeEeE--CCE-EeccceEEeccCHHHHHHHHHHHHHhcC---CCCCcHHHHHHHHHHHHHHHhhcccH
Confidence 69999999999997764 443 2332234578999999999999987651 1111011111222222221
Q ss_pred --HHHhHhcCCCCeeEEEEecccCCceeEEEecHHHH---HHHHHHH-----HhhhhhHHHHHHHHcCC--CccccceEE
Q psy5547 482 --ERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARF---EELNADL-----FRGTMEPVEKSLRDAKM--DKAQIHDIV 549 (714)
Q Consensus 482 --e~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~---~~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~Vi 549 (714)
+..+..++......+.++ +|. .+.++++.| +.+++|. ...+.+.|.+.|..+.. ....++.|+
T Consensus 224 ~~e~~~~~~~~~~~~~~~lp---dg~--~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~Iv 298 (375)
T 2fxu_A 224 ENEMATAASSSSLEKSYELP---DGQ--VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 298 (375)
T ss_dssp HHHHHHHHHCSTTCEEEECT---TSC--EEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEE
T ss_pred HHHHHhhcccCccCeEEECC---CCC--EEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcE
Confidence 111222222223333332 222 467888777 3344543 35678888888887642 234468899
Q ss_pred EEcCCCCcHHHHHHHHHHcC----C---CcccCCCCCchhhHhhHHHHHH
Q psy5547 550 LVGGSTRIPKVQKLLQDFFN----G---KELNKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 550 LvGG~s~~p~l~~~l~~~f~----~---~~v~~~~~p~~ava~GAa~~a~ 592 (714)
|+||+|++|+++++|++.+. . .++..+.+|..+++.||+++|.
T Consensus 299 LtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 299 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp EESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred eeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 99999999999999999872 1 4555678999999999999997
No 28
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.82 E-value=1.3e-19 Score=197.54 Aligned_cols=242 Identities=18% Similarity=0.174 Sum_probs=170.5
Q ss_pred HHHHHHHHH-HHhCCC--CCeEEEeeCCCCCHHHHHHHHHHH-HHcCCCeeEeeechhHHHHH-hhcccccCCCCCCCCc
Q psy5547 333 LTKMKETAE-AYLGKT--VSNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIA-YGLDKKVGSAAGSGER 407 (714)
Q Consensus 333 L~~l~~~~~-~~~~~~--~~~~vitVPa~~~~~~r~~l~~A~-~~AGl~~~~li~Ep~AAa~~-~~~~~~~~~~~~~~~~ 407 (714)
++.|++++- +.++.. ...+|||+|++|+..+|++|.+++ +.+|++.+.+++||.||+++ |... ... . .+.
T Consensus 89 ~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~-~~~--~--~~~ 163 (418)
T 1k8k_A 89 MERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSR-QVG--E--RTL 163 (418)
T ss_dssp HHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGST-TCC--S--CCC
T ss_pred HHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhccc-ccC--C--CCC
Confidence 444444443 345432 457999999999999999999999 88999999999999999987 4211 110 0 122
Q ss_pred EEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHHHHHHhHh
Q psy5547 408 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRT 487 (714)
Q Consensus 408 ~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ 487 (714)
+.+|||+||||||++++. ++. .+....+..++||.+||+.|.+++.+++. ...... -...+|.+|+.
T Consensus 164 ~glVvDiG~gtt~v~~v~--~G~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~-------~~~~~e~iK~~ 230 (418)
T 1k8k_A 164 TGTVIDSGDGVTHVIPVA--EGY-VIGSCIKHIPIAGRDITYFIQQLLRDREV---GIPPEQ-------SLETAKAVKER 230 (418)
T ss_dssp CEEEEEESSSCEEEEEEE--TTE-ECGGGCEEESCSHHHHHHHHHHHHHTTCC---CCCGGG-------HHHHHHHHHHH
T ss_pred eEEEEEcCCCceEEEEeE--CCE-EcccceEEEeCcHHHHHHHHHHHHHhcCC---CCCCHH-------HHHHHHHHHHh
Confidence 669999999999999985 343 22222355789999999999999875431 111111 12356777777
Q ss_pred cCCCC-----------------eeEEEEecccCCceeEEEecHHHH---HHHHHHHH------hhhhhHHHHHHHHcCC-
Q psy5547 488 LSSST-----------------QASIEIDSLFEGVDFYTSVTRARF---EELNADLF------RGTMEPVEKSLRDAKM- 540 (714)
Q Consensus 488 ls~~~-----------------~~~i~i~~~~~~~~~~~~itr~~~---~~~~~~~~------~~i~~~i~~~l~~~~~- 540 (714)
++... ...+.++....+....+.+++++| |.+|.|.+ ..+.+.|.+.|..+..
T Consensus 231 ~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~ 310 (418)
T 1k8k_A 231 YSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPID 310 (418)
T ss_dssp HCCCCSCHHHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGG
T ss_pred hchhcccHHHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHH
Confidence 65321 134555554455666789999998 55555543 5688999999998753
Q ss_pred -CccccceEEEEcCCCCcHHHHHHHHHHcCC-----------------------CcccCCCCCchhhHhhHHHHHH
Q psy5547 541 -DKAQIHDIVLVGGSTRIPKVQKLLQDFFNG-----------------------KELNKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 541 -~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~-----------------------~~v~~~~~p~~ava~GAa~~a~ 592 (714)
....++.|+|+||+|++|+++++|++.+.. .++..+.+|..++..||+++|.
T Consensus 311 ~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 311 VRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp GTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred HHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 345678899999999999999999876521 2334456788999999999886
No 29
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.81 E-value=4.9e-20 Score=165.45 Aligned_cols=120 Identities=62% Similarity=0.909 Sum_probs=108.5
Q ss_pred cccceeeeeeceeeeEEEEcCCeEEEEEecCCCCCeeEEEEEEeccCCCCeEEEEEeeccccccccCcceeEEEEecCCC
Q psy5547 74 EVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPP 153 (714)
Q Consensus 74 ~v~~~~~~dv~~~~i~~~~~~~~~~~l~~~~~~iP~~~~~~~~~~~~~q~~~~~~v~eg~~~~~~~~~~i~~~~i~~~~~ 153 (714)
-++++.+.|++|+++|+++.++.+.+||++|+++|++++..|++..|+|+.+.+.+|||++..+.+|..||+|.+.++|+
T Consensus 13 ~~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp 92 (135)
T 1q5l_A 13 VPRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINP 92 (135)
T ss_dssp --------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCS
T ss_pred EeCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceEEEEEEecCCeeEEEEEeecccccccceeecCC
Q psy5547 154 APRGVPQIEVTFDIDANGILNVSAIEKSTGKENKITITND 193 (714)
Q Consensus 154 ~~~g~~~i~v~~~~d~~G~l~v~~~~~~~~~~~~~~i~~~ 193 (714)
.++|.++|+|+|++|.||+|+|++.++.+|++..+++.++
T Consensus 93 ~p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 93 APRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CCSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred CCCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 9999999999999999999999999999999999988765
No 30
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.72 E-value=3.8e-18 Score=179.00 Aligned_cols=227 Identities=14% Similarity=0.181 Sum_probs=145.6
Q ss_pred CCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCC-CCHH--HH--HHHHHH------------HHHcCCCeeEeeec
Q psy5547 322 GPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAY-FNDS--QR--QATKDS------------GTIAGLNVLRIINE 384 (714)
Q Consensus 322 ~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~-~~~~--~r--~~l~~A------------~~~AGl~~~~li~E 384 (714)
.++++.+++.+ ..|+. +. ..+.+ ..+|+++|.. |... |+ +++.+- .+.+++..+.+++|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~-~~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SG-LPVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HS-CCSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cC-CCCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 45555565543 44432 11 11222 4699999987 6531 11 222221 23445677899999
Q ss_pred hhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhc
Q psy5547 385 PTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYK 464 (714)
Q Consensus 385 p~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~ 464 (714)
|.||++++..+.. ++..++|+|+||||||+++++ ++...+....++..+||.+||+.|.+++.++ +
T Consensus 149 ~~aa~~~~~~~~~-------~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~ 214 (320)
T 2zgy_A 149 SIPAGYEVLQELD-------ELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----R 214 (320)
T ss_dssp SHHHHHHHHHHSC-------TTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----S
T ss_pred cHHHHHhhhcccc-------CCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----C
Confidence 9999998863322 467899999999999999997 4444455566778999999999999888542 1
Q ss_pred cCccccHHHHHHHHHHHHHH-hHhcCCCCeeEEEEecccCCceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCcc
Q psy5547 465 KDLTTNKRALRRLRTACERA-KRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKA 543 (714)
Q Consensus 465 ~~~~~~~~~~~~l~~~~e~~-K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~ 543 (714)
.+. .. ..+|+. |..- . .. ......+ ..-..+++.+++.+.++.+.+.|.+.+++. .
T Consensus 215 ~~i--~~-------~~ae~~lk~~~-~--~~--~~~~~i~-----~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~ 271 (320)
T 2zgy_A 215 TKG--SS-------YLADDIIIHRK-D--NN--YLKQRIN-----DENKISIVTEAMNEALRKLEQRVLNTLNEF----S 271 (320)
T ss_dssp BGG--GH-------HHHHHHHHTTT-C--HH--HHHHHSS-----SSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----C
T ss_pred CCC--CH-------HHHHHHHHHhh-h--hh--cccceec-----CchhhHHHHHHHHHHHHHHHHHHHHHHHhh----c
Confidence 111 11 123333 2220 0 00 0000000 001345666677777777777777666542 5
Q ss_pred ccceEEEEcCCCCcHHHHHHHHHHcCCC--cccCCCCCchhhHhhHHHHH
Q psy5547 544 QIHDIVLVGGSTRIPKVQKLLQDFFNGK--ELNKSINPDEAVAYGAAVQA 591 (714)
Q Consensus 544 ~i~~ViLvGG~s~~p~l~~~l~~~f~~~--~v~~~~~p~~ava~GAa~~a 591 (714)
+++.|+|+||+|++ +++.|++.|+.. ++..+.||++|+|.||+++|
T Consensus 272 ~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 272 GYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 67999999999987 999999999543 57778899999999999875
No 31
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.55 E-value=1.7e-15 Score=163.22 Aligned_cols=214 Identities=19% Similarity=0.222 Sum_probs=88.8
Q ss_pred CeEEEeeCCCCCHHHHHHHHHHH-HHcCCCeeEeeechhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEEEEe
Q psy5547 349 SNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSILTIE 427 (714)
Q Consensus 349 ~~~vitVPa~~~~~~r~~l~~A~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~ 427 (714)
..+++|+|+.++..+|+++.+++ +.+|++.+.++.||.||+++++.. +.+|+|+|+|||+++.+.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~------------~~lVVDiG~g~T~v~pv~-- 170 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLL------------TGVVVDSGDGVTHICPVY-- 170 (394)
T ss_dssp -------------------------------------------------------------CCEEEECSSCEEEECEE--
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCc------------eEEEEEcCCCceEeeeeE--
Confidence 45999999999999999999865 778999999999999999988642 349999999999998774
Q ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHHHHHHhHhcCCC----------------
Q psy5547 428 DGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSS---------------- 491 (714)
Q Consensus 428 ~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~---------------- 491 (714)
++.. +.......++||.++|+.|.+++..+. +........ ..+|..|+.+..-
T Consensus 171 ~G~~-~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~ 239 (394)
T 1k8k_B 171 EGFS-LPHLTRRLDIAGRDITRYLIKLLLLRG---YAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTV 239 (394)
T ss_dssp TTEE-CSTTCEEESCCHHHHHHHHHHHHHHTT---CCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCST
T ss_pred CCEE-cccceEEeeccHHHHHHHHHHHHHhcC---CCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCc
Confidence 3432 111123468999999999999986541 111111111 2334444443321
Q ss_pred CeeEEEEecccCCceeEEEecHHHHH---HHHHHH-----HhhhhhHHHHHHHHcCCC--ccccceEEEEcCCCCcHHHH
Q psy5547 492 TQASIEIDSLFEGVDFYTSVTRARFE---ELNADL-----FRGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQ 561 (714)
Q Consensus 492 ~~~~i~i~~~~~~~~~~~~itr~~~~---~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~l~ 561 (714)
....+.+ .+|. .+.++.+.|. .+++|. ...+.+.|.+.|..+..+ ..-.+.|+|+||+|.+|++.
T Consensus 240 ~~~~~~l---pdg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~ 314 (394)
T 1k8k_B 240 LVESYTL---PDGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLP 314 (394)
T ss_dssp TCEEEEC---TTSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHH
T ss_pred CceEEEC---CCCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHH
Confidence 1122222 2232 4567777663 334442 245778888888887543 33457899999999999999
Q ss_pred HHHHHHcCC------------------CcccCCCCCchhhHhhHHHHHH
Q psy5547 562 KLLQDFFNG------------------KELNKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 562 ~~l~~~f~~------------------~~v~~~~~p~~ava~GAa~~a~ 592 (714)
++|++.+.. .++..+.+|..++..|++++|.
T Consensus 315 ~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 315 SRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 999988721 2233466788999999998886
No 32
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.53 E-value=6.9e-15 Score=155.42 Aligned_cols=209 Identities=14% Similarity=0.184 Sum_probs=140.1
Q ss_pred CeEEEeeCCCCCHHHH-HHHHHHHHHcCC------------CeeEeeechhHHHHHhhcccccCCCCCCCCcEEEEEEeC
Q psy5547 349 SNAVITVPAYFNDSQR-QATKDSGTIAGL------------NVLRIINEPTAAAIAYGLDKKVGSAAGSGERNVLIFDLG 415 (714)
Q Consensus 349 ~~~vitVPa~~~~~~r-~~l~~A~~~AGl------------~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~~vlVvD~G 415 (714)
..+++++|..+...+| +++++++..++- ..+.+++||.||++++..+..... ..-.+..++|+|+|
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~-~~~~~~~~~vvDiG 192 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVF-KAFTEGKYSVLDFG 192 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEEC-HHHHTCEEEEEEEC
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccc-cccccCcEEEEEeC
Confidence 4789999999988887 589998886543 567899999999999876431100 00036789999999
Q ss_pred CceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHHHHHHhHhcCCCCeeE
Q psy5547 416 GGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQAS 495 (714)
Q Consensus 416 ggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~ 495 (714)
|||||++++ .++.+. ....+...+||..+++.+.+++.+++. +.... . ...++.+. +..
T Consensus 193 ggTtd~~v~--~~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~-~~~----- 251 (355)
T 3js6_A 193 SGTTIIDTY--QNMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE-YKQ----- 251 (355)
T ss_dssp SSCEEEEEE--ETTEEC-GGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC---------
T ss_pred CCcEEEEEE--cCCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc-ccc-----
Confidence 999999999 344331 112334679999999999999877642 11111 1 11121111 000
Q ss_pred EEEecccCCce--eEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHH--HHHHHHHHcCCC
Q psy5547 496 IEIDSLFEGVD--FYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK--VQKLLQDFFNGK 571 (714)
Q Consensus 496 i~i~~~~~~~~--~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~--l~~~l~~~f~~~ 571 (714)
.+.+ -...+ .+.+++.++++++.|...|++.+.+ +..++.|+|+||++.++. |.+.|++.|+..
T Consensus 252 -------~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~ 319 (355)
T 3js6_A 252 -------CKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA 319 (355)
T ss_dssp -----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC
T ss_pred -------ccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC
Confidence 0000 01122 3356777778888888877777753 356799999999999998 899999988432
Q ss_pred cccCCCCCchhhHhhHHHHHHHHhC
Q psy5547 572 ELNKSINPDEAVAYGAAVQAAILHG 596 (714)
Q Consensus 572 ~v~~~~~p~~ava~GAa~~a~~l~~ 596 (714)
.||..|+|.|+..++..+.+
T Consensus 320 -----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 -----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp -----SSGGGHHHHHHHHHHHHHHH
T ss_pred -----CCcHHHHHHHHHHHHHHHHh
Confidence 79999999999999988764
No 33
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.51 E-value=3.8e-14 Score=145.28 Aligned_cols=219 Identities=19% Similarity=0.164 Sum_probs=139.4
Q ss_pred CccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccCCCC
Q psy5547 323 PTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSAA 402 (714)
Q Consensus 323 ~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~ 402 (714)
..|.++.+++|+.+++.+. .....+......... ..++...+..|+||+|+++++.....
T Consensus 33 g~~~e~a~~vl~~~~~~a~----~~~~~~~~~a~t~~~-----------~~a~~~~~~~Vne~~aha~a~~~~~~----- 92 (276)
T 4ehu_A 33 GTGTTGPSRVLEKLYGKTG----LAREDIKKVVVTGYG-----------RMNYSDADKQISELSCHARGVNFIIP----- 92 (276)
T ss_dssp CTTSSHHHHHHHHHHHHHC----CCGGGEEEEEEESTT-----------GGGCCSCSEECCHHHHHHHHHHHHST-----
T ss_pred CCCHHHHHHHHHHHHHHCC----CcchhccccccCchH-----------HHHhhCCCcccchHHHHHHHHHHhCC-----
Confidence 3456788888888777663 333333222212222 23566778899999999998765432
Q ss_pred CCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHHHH
Q psy5547 403 GSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACE 482 (714)
Q Consensus 403 ~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e 482 (714)
....|+|+|||+++++++. .++.++.....++...|+.+|++.+++++.-.+.... .+ +.
T Consensus 93 ----~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~~~------------~~---~~ 152 (276)
T 4ehu_A 93 ----ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSELG------------SI---SM 152 (276)
T ss_dssp ----TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGGHH------------HH---HT
T ss_pred ----CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChhhhH------------HH---Hh
Confidence 2347899999999999885 4677787788888999999999999888754332110 00 00
Q ss_pred HHhH--hcCCCCeeEEE---EecccCCceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCc
Q psy5547 483 RAKR--TLSSSTQASIE---IDSLFEGVDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 557 (714)
Q Consensus 483 ~~K~--~ls~~~~~~i~---i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~ 557 (714)
.++. .+++....... +.....+ ...++++..+.+.+.+.+....... ..++.|+|+||.+++
T Consensus 153 ~a~~~~~i~~~~~~f~~s~~~~~~~~~---------~~~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n 219 (276)
T 4ehu_A 153 NSQNEVSISSTCTVFAESEVISHLSEN---------AKIEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARN 219 (276)
T ss_dssp TCSSCCCCCCCSHHHHHHHHHHHHHTT---------CCHHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGC
T ss_pred cCCCCCCcCCccchhhhhHHHHhhhcc---------ccHHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccch
Confidence 0010 00000000000 0000000 0123455555555555554444332 456889999999999
Q ss_pred HHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHh
Q psy5547 558 PKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 595 (714)
Q Consensus 558 p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~ 595 (714)
|+|++.+++.| +.++..+.+|++++|+|||++|....
T Consensus 220 ~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 220 SGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 99999999999 88899999999999999999997654
No 34
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.40 E-value=1.1e-12 Score=114.26 Aligned_cols=83 Identities=61% Similarity=1.019 Sum_probs=77.6
Q ss_pred HHHHHHHHHhhHHHHHHhhhccccchhhhccCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhHHHHHH
Q psy5547 218 KQKAVITAKNSLESYCFNMKSTMEDEKLKDKISSAERTQILDKCNDVIKWLDSNQLAEKEEFEDKQKELEAICNPIITKL 297 (714)
Q Consensus 218 ~~~~~~~arN~LEs~iy~~r~~L~~~~~~~~~s~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~k~~eL~~~~~~i~~r~ 297 (714)
.++++.++||.||+|||.++..|.++.+..+++++++..+...+.++.+||+.+++++.++|+.++++|++++.||..|+
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~ 82 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35778999999999999999999876688999999999999999999999988878899999999999999999999999
Q ss_pred Hhc
Q psy5547 298 YQA 300 (714)
Q Consensus 298 ~~~ 300 (714)
++.
T Consensus 83 y~~ 85 (113)
T 3lof_A 83 YQG 85 (113)
T ss_dssp HHC
T ss_pred HHh
Confidence 975
No 35
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.39 E-value=5.5e-13 Score=121.83 Aligned_cols=101 Identities=26% Similarity=0.314 Sum_probs=77.8
Q ss_pred EEEeecceeEEEEeCCeeEEeeCCCCCcccc---------cccc-eeeeeeec---------CCCcc-------cCCCCc
Q psy5547 607 LLDVTPLSLGIETAGGFELTSIPPATSRLCL---------DEVT-ASISMLTG---------YPGLC-------LPSGSQ 660 (714)
Q Consensus 607 ~~~v~~~sigi~~~~g~~~~~i~~~t~~~~~---------d~~t-~~i~~~~~---------y~g~~-------~p~g~~ 660 (714)
+.|++|+|+||++.+|.|.++||+||++|+. |+++ ..|.+|.| +.|.| .|+|.|
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 5799999999999999999999999999863 5555 57778776 23433 567776
Q ss_pred cc-------ccceeeee---------eeEEEEeccccccHHHHHHHHHHhhhhhhhhhhhhhh
Q psy5547 661 LV-------REDKINIT---------KTVIFVSCSQRRCIERYVEMIAIAGRCTRHRRMRYQK 707 (714)
Q Consensus 661 ~~-------~~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (714)
.+ .||.|+++ ..+++++++++||+++|++|+++|++|+++|+..-.+
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~ 144 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRER 144 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHT
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 55 88898854 4889999999999999999999999999988765544
No 36
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.36 E-value=1.3e-12 Score=119.65 Aligned_cols=101 Identities=23% Similarity=0.276 Sum_probs=82.1
Q ss_pred EEEeecceeEEEEeCCeeEEeeCCCCCcccc---------cccc-eeeeeeec---------CCCcc-------cCCCCc
Q psy5547 607 LLDVTPLSLGIETAGGFELTSIPPATSRLCL---------DEVT-ASISMLTG---------YPGLC-------LPSGSQ 660 (714)
Q Consensus 607 ~~~v~~~sigi~~~~g~~~~~i~~~t~~~~~---------d~~t-~~i~~~~~---------y~g~~-------~p~g~~ 660 (714)
+.|++|+|+||++.+|.|.++||+||++|+. |+++ ..+.+|.| +.|.| .|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 5699999999999999999999999999863 5555 57778776 23433 466766
Q ss_pred cc-------ccceeeee---------eeEEEEeccccccHHHHHHHHHHhhhhhhhhhhhhhh
Q psy5547 661 LV-------REDKINIT---------KTVIFVSCSQRRCIERYVEMIAIAGRCTRHRRMRYQK 707 (714)
Q Consensus 661 ~~-------~~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (714)
.+ .||.|+++ ..+++++++++||+++|++|+++|++|+++|+..-.+
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~ 144 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAK 144 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 55 88888854 4889999999999999999999999999988765543
No 37
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.35 E-value=1.7e-12 Score=118.44 Aligned_cols=100 Identities=29% Similarity=0.357 Sum_probs=79.8
Q ss_pred EEEeecceeEEEEeCCeeEEeeCCCCCcccc---------cccc-eeeeeeec---------CCCcc-------cCCCCc
Q psy5547 607 LLDVTPLSLGIETAGGFELTSIPPATSRLCL---------DEVT-ASISMLTG---------YPGLC-------LPSGSQ 660 (714)
Q Consensus 607 ~~~v~~~sigi~~~~g~~~~~i~~~t~~~~~---------d~~t-~~i~~~~~---------y~g~~-------~p~g~~ 660 (714)
+.|++|+|+||++.+|.|.++||+||++|+. |+++ ..+.+|.| +.|.| .|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 5799999999999999999999999999863 5555 67777776 23433 566776
Q ss_pred cc-------ccceeeee---------eeEEEEeccccccHHHHHHHHHHhhhhhhhhhhhhhh
Q psy5547 661 LV-------REDKINIT---------KTVIFVSCSQRRCIERYVEMIAIAGRCTRHRRMRYQK 707 (714)
Q Consensus 661 ~~-------~~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (714)
.+ .||.|+++ ..++++++ ++||+++|++|+++|++|+++|+.+-++
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~ 143 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKEL 143 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 55 88888854 47888888 9999999999999999999988765543
No 38
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.34 E-value=5.8e-13 Score=139.51 Aligned_cols=204 Identities=14% Similarity=0.189 Sum_probs=139.0
Q ss_pred CeEEEeeCCCCCH--HHHHHHHHHHHHc--------C------CCeeEeeechhHHHHHhhcccccCCCCCCCCcEEEEE
Q psy5547 349 SNAVITVPAYFND--SQRQATKDSGTIA--------G------LNVLRIINEPTAAAIAYGLDKKVGSAAGSGERNVLIF 412 (714)
Q Consensus 349 ~~~vitVPa~~~~--~~r~~l~~A~~~A--------G------l~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~~vlVv 412 (714)
..+++++|..+-. .+|+.+++....- | +..+.+++||.+|.+.+. .. .++..++|+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~-~~-------~~~~~v~vv 177 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ-EN-------FKNKNVAVI 177 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC-CC-------CTTCEEEEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc-hh-------hccCCEEEE
Confidence 4789999988774 3677787776632 2 134677889888887652 11 156889999
Q ss_pred EeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHH-HHHHhhccCccccHHHHHHHHHHHHHHhHhcCCC
Q psy5547 413 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQ-EFKRKYKKDLTTNKRALRRLRTACERAKRTLSSS 491 (714)
Q Consensus 413 D~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~ 491 (714)
|+||||||++++. ++.+ +....+...+||..+++.|.+++.+ ++ +...... .+|++|+. ..
T Consensus 178 DiGggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~----g~~i~~~---------~~e~i~~~--g~ 239 (329)
T 4apw_A 178 DFGGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTDLNN----GNLITNE---------QAESALNN--GY 239 (329)
T ss_dssp EECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSSCSS----CSCTTSB---------TTTTCSSS--CS
T ss_pred EeCCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHhhcc----CCCCCHH---------HHHHHHhc--CC
Confidence 9999999999998 3433 2222345789999999999987765 33 2222111 23334432 11
Q ss_pred CeeEEEEecccCCceeEEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCC
Q psy5547 492 TQASIEIDSLFEGVDFYTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK 571 (714)
Q Consensus 492 ~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~ 571 (714)
.. .+.+. ..+..+.+++.+++.++.|.+.+++. +..+..++.|+|+||++.+ +.+.|++.| +.
T Consensus 240 --~~-------~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~-~~ 302 (329)
T 4apw_A 240 --MK-------KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTY-PN 302 (329)
T ss_dssp --SC-------EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHS-TT
T ss_pred --cc-------cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHc-CC
Confidence 00 01111 13456778888888888777777766 2344557999999999997 679999999 44
Q ss_pred cccCCCCCchhhHhhHHHHHHHHh
Q psy5547 572 ELNKSINPDEAVAYGAAVQAAILH 595 (714)
Q Consensus 572 ~v~~~~~p~~ava~GAa~~a~~l~ 595 (714)
++....||..|+|+|+..++...-
T Consensus 303 ~v~v~~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 303 NSIITNNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp CEECCSSGGGHHHHHHHHHHHHHH
T ss_pred CCEecCCChhhHHHHHHHHHhhhh
Confidence 567788999999999998887553
No 39
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.29 E-value=4.2e-12 Score=119.28 Aligned_cols=104 Identities=25% Similarity=0.337 Sum_probs=79.9
Q ss_pred cceEEEEeecceeEEEEeCCeeEEeeCCCCCcccc---------cccc-eeeeeeec---------CCCcc-------cC
Q psy5547 603 QDLLLLDVTPLSLGIETAGGFELTSIPPATSRLCL---------DEVT-ASISMLTG---------YPGLC-------LP 656 (714)
Q Consensus 603 ~~~~~~~v~~~sigi~~~~g~~~~~i~~~t~~~~~---------d~~t-~~i~~~~~---------y~g~~-------~p 656 (714)
..+.+.|++|+||||++.+|.|.++||+||++|+. |+++ ..|.+|.| +.|.| .|
T Consensus 18 ~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~p 97 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPAP 97 (182)
T ss_dssp ------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCC
T ss_pred CCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCCC
Confidence 45679999999999999999999999999999863 5555 67777776 22333 46
Q ss_pred CCCccc-------ccceeeee---------eeEEEEeccccccHHHHHHHHHHhhhhhhhhhhhhhh
Q psy5547 657 SGSQLV-------REDKINIT---------KTVIFVSCSQRRCIERYVEMIAIAGRCTRHRRMRYQK 707 (714)
Q Consensus 657 ~g~~~~-------~~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (714)
+|.|.+ .||+|+++ ..++++++ ++||+++|++|+++|++|+++|+.+.++
T Consensus 98 ~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~ 163 (182)
T 3n8e_A 98 RGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKER 163 (182)
T ss_dssp TTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 677655 88888854 47888887 9999999999999999999988876554
No 40
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.25 E-value=6.9e-12 Score=122.06 Aligned_cols=99 Identities=29% Similarity=0.366 Sum_probs=79.2
Q ss_pred EEEEeecceeEEEEeCCeeEEeeCCCCCcccc---------cccc-eeeeeeec---------CCCcc-------cCCCC
Q psy5547 606 LLLDVTPLSLGIETAGGFELTSIPPATSRLCL---------DEVT-ASISMLTG---------YPGLC-------LPSGS 659 (714)
Q Consensus 606 ~~~~v~~~sigi~~~~g~~~~~i~~~t~~~~~---------d~~t-~~i~~~~~---------y~g~~-------~p~g~ 659 (714)
++.||+|+|+||++.||.|.++||+||++|+. |+++ ..|.+|.| +.|.| .|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 57899999999999999999999999999973 5555 67777776 22433 56677
Q ss_pred ccc-------ccceeeeee---------eEEEEeccccccHHHHHHHHHHhhhhhhhhhhhh
Q psy5547 660 QLV-------REDKINITK---------TVIFVSCSQRRCIERYVEMIAIAGRCTRHRRMRY 705 (714)
Q Consensus 660 ~~~-------~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (714)
|.+ .||.|+++. .+++++. .+||+++|++|+++|++|+++|+.+.
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r 142 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFE 142 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHH
Confidence 755 888998544 7888775 45999999999999999999666543
No 41
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.25 E-value=1e-11 Score=134.15 Aligned_cols=241 Identities=19% Similarity=0.157 Sum_probs=149.1
Q ss_pred HHHHHHHHHH-HHhCCC--CCeEEEeeCCCCCHHHHHHHHHHH-HHcCCCeeEeeechhHHHHHhhcccccCCCCCCCCc
Q psy5547 332 VLTKMKETAE-AYLGKT--VSNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSAAGSGER 407 (714)
Q Consensus 332 ~L~~l~~~~~-~~~~~~--~~~~vitVPa~~~~~~r~~l~~A~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~ 407 (714)
.++++++++- ..++.. -..+++|.|...+...|+.|.+.+ +.+|++.+.++.+|.+|+++.+...... ....
T Consensus 104 ~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~----~~~~ 179 (427)
T 3dwl_A 104 HMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVT----DRSL 179 (427)
T ss_dssp HHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTC----SCCC
T ss_pred HHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCccccc----CCCc
Confidence 4455555543 334432 247999999999999999999987 6799999999999999999877432100 0124
Q ss_pred EEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHHHHHHhHh
Q psy5547 408 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRT 487 (714)
Q Consensus 408 ~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ 487 (714)
+-+|+|+|+|+|+++.+. ++.. +........+||.++|+.|.+++..+... . .=...++..|+.
T Consensus 180 tglVVDiG~g~T~v~PV~--~G~~-l~~~~~rl~~gG~~lt~~L~~lL~~~~~~------~-------~~~~~~~~IKe~ 243 (427)
T 3dwl_A 180 TGTVVDSGDGVTHIIPVA--EGYV-IGSSIKTMPLAGRDVTYFVQSLLRDRNEP------D-------SSLKTAERIKEE 243 (427)
T ss_dssp CEEEEEESSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHH
T ss_pred eEEEEECCCCceEEEEEE--CCEE-ehhhheeccccHHHHHHHHHHHHHHcCCC------c-------hhHHHHHHHHHh
Confidence 569999999999999983 3321 11111125799999999999887655331 0 011234445554
Q ss_pred cCCCCee-----------EEEEec--c--cCCceeEEEecHHHHH---HHHHHH------HhhhhhHHHHHHHHcCCC--
Q psy5547 488 LSSSTQA-----------SIEIDS--L--FEGVDFYTSVTRARFE---ELNADL------FRGTMEPVEKSLRDAKMD-- 541 (714)
Q Consensus 488 ls~~~~~-----------~i~i~~--~--~~~~~~~~~itr~~~~---~~~~~~------~~~i~~~i~~~l~~~~~~-- 541 (714)
+..-... ...+.. + .+|....+++..++|. -+|+|. ...|.+.|.+.|.++..+
T Consensus 244 ~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr 323 (427)
T 3dwl_A 244 CCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVR 323 (427)
T ss_dssp HCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHH
T ss_pred cCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHH
Confidence 4321100 000100 1 2333345667766653 444442 245778888888876533
Q ss_pred ccccceEEEEcCCCCcHHHHHHHHHHc----C---------------C--CcccCCCCCchhhHhhHHHHHH
Q psy5547 542 KAQIHDIVLVGGSTRIPKVQKLLQDFF----N---------------G--KELNKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 542 ~~~i~~ViLvGG~s~~p~l~~~l~~~f----~---------------~--~~v~~~~~p~~ava~GAa~~a~ 592 (714)
+.-..+|+|+||+|.+|++.++|++.+ + . .++..+.++..++=.|++++|.
T Consensus 324 ~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 324 KGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 222367999999999999999999765 1 1 2344456777888899998885
No 42
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.20 E-value=9.7e-12 Score=131.95 Aligned_cols=196 Identities=23% Similarity=0.241 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHc-CC--CeeEeeechhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecC
Q psy5547 362 SQRQATKDSGTIA-GL--NVLRIINEPTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAG 438 (714)
Q Consensus 362 ~~r~~l~~A~~~A-Gl--~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g 438 (714)
.+-+.+.+|.+.+ |+ ++-. .||.||+++.+.+.. .+..++++|+||||||++++.-....+..
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE-------~eLGvaiIDmGGGTTd~sVf~~G~lv~a~----- 433 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG-------TTRPLAILDLGAGSTDASIINPKGDIIAT----- 433 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT-------CCSSEEEEEECSSEEEEEEECTTCCEEEE-----
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-------CcCCeEEEEeCCCcceEEEEcCCcEEEEE-----
Confidence 3466788899999 99 6666 999999999877654 56789999999999999999754333321
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHHHHHHhHhcCC----------CCeeEEEE--ecccCC--
Q psy5547 439 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSS----------STQASIEI--DSLFEG-- 504 (714)
Q Consensus 439 ~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~----------~~~~~i~i--~~~~~~-- 504 (714)
....||+.++..|..-|.-. + +..||+.|. ... .....+.+ +.+...
T Consensus 434 ~ip~gG~~VT~DIA~~Lgt~-----------d-------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~ 494 (610)
T 2d0o_A 434 HLAGAGDMVTMIIARELGLE-----------D-------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVF 494 (610)
T ss_dssp EEECSHHHHHHHHHHHHTCC-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGT
T ss_pred EeccchHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCccee
Confidence 25689999999988665322 0 136788888 421 11223444 221110
Q ss_pred -c------eeEEEecHHH--HHHHHHHHHhhhhhH--HHHHHHHcCC-----CccccceEEEEcCCCCcHHHHHHHHHHc
Q psy5547 505 -V------DFYTSVTRAR--FEELNADLFRGTMEP--VEKSLRDAKM-----DKAQIHDIVLVGGSTRIPKVQKLLQDFF 568 (714)
Q Consensus 505 -~------~~~~~itr~~--~~~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~s~~p~l~~~l~~~f 568 (714)
. ..-..| +.+ +|+ ++-+-+++.+. +...|+..+. +-.+|..|+|+||+|.++.+.++.++.|
T Consensus 495 ~Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL 572 (610)
T 2d0o_A 495 ARVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDAL 572 (610)
T ss_dssp TCEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHT
T ss_pred eeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHh
Confidence 0 111244 445 555 54444444333 2233554432 2456799999999999999999999999
Q ss_pred CCCcc-------cCCCCCchhhHhhHHHHHH
Q psy5547 569 NGKEL-------NKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 569 ~~~~v-------~~~~~p~~ava~GAa~~a~ 592 (714)
..-++ .....|..|+|.|.++|-+
T Consensus 573 ~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 573 AHYRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp TTSSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred CcCCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 44122 2245899999999997654
No 43
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.18 E-value=1.3e-11 Score=131.58 Aligned_cols=201 Identities=19% Similarity=0.182 Sum_probs=130.7
Q ss_pred EEeeCCCCCHHHHHHHHHHHHHc-CC--CeeEeeechhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEEEEeC
Q psy5547 352 VITVPAYFNDSQRQATKDSGTIA-GL--NVLRIINEPTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSILTIED 428 (714)
Q Consensus 352 vitVPa~~~~~~r~~l~~A~~~A-Gl--~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~ 428 (714)
++|....+ -+.+.+|.+.+ |+ ++-. .||.||+++.+.+.. .+..++++|+||||||++++.-..
T Consensus 364 mVt~~~~~----m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE-------~elGvaiIDmGgGTTd~sVf~~g~ 430 (607)
T 1nbw_A 364 MVKADRLQ----MQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG-------CAAPLAILDLGAGSTDAAIVNAEG 430 (607)
T ss_dssp EEECCCCC----SCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT-------CCSSEEEEEECSSEEEEEEECSSS
T ss_pred eeecCHHH----HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-------CcCCeEEEEeCCCcceEEEEcCCc
Confidence 45554443 34577788888 88 5545 899999999877654 567899999999999999997544
Q ss_pred CEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHHHHHHHHHhHhcCC----------CCeeEEEE
Q psy5547 429 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSS----------STQASIEI 498 (714)
Q Consensus 429 ~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~----------~~~~~i~i 498 (714)
..+.. ....||+.++..|..-|.-. + +..||+.|. ... .....+.+
T Consensus 431 lv~a~-----~ip~gG~~VT~DIA~~Lg~~-----------d-------~~~AErIK~-YG~A~~e~lf~~~dede~Iev 486 (607)
T 1nbw_A 431 QITAV-----HLAGAGNMVSLLIKTELGLE-----------D-------LSLAEAIKK-YPLAKVESLFSIRHENGAVEF 486 (607)
T ss_dssp CEEEE-----EEECCHHHHHHHHHHHHTCS-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEE
T ss_pred EEEEE-----EeccchHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEE
Confidence 33322 25689999999988665322 0 136788888 421 11223444
Q ss_pred --ecccCC---c------eeEEEecHHH--HHHHHHHHHhhhhhH--HHHHHHHcCCC-----ccccceEEEEcCCCCcH
Q psy5547 499 --DSLFEG---V------DFYTSVTRAR--FEELNADLFRGTMEP--VEKSLRDAKMD-----KAQIHDIVLVGGSTRIP 558 (714)
Q Consensus 499 --~~~~~~---~------~~~~~itr~~--~~~~~~~~~~~i~~~--i~~~l~~~~~~-----~~~i~~ViLvGG~s~~p 558 (714)
+.+... . ..-..| +.+ +|+ ++-+-+++.+. +...|+..+.. -.+|..|+|+||+|.++
T Consensus 487 ~~~~lgp~~~~R~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~ 564 (607)
T 1nbw_A 487 FREALSPAVFAKVVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDF 564 (607)
T ss_dssp CSSCCCGGGTTCEEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSS
T ss_pred ecCCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcc
Confidence 221110 0 111234 444 555 44444444333 34447776653 24568999999999999
Q ss_pred HHHHHHHHHcCCCc-------ccCCCCCchhhHhhHHHHH
Q psy5547 559 KVQKLLQDFFNGKE-------LNKSINPDEAVAYGAAVQA 591 (714)
Q Consensus 559 ~l~~~l~~~f~~~~-------v~~~~~p~~ava~GAa~~a 591 (714)
.+.++.++.|..-+ ......|..|+|.|.++|-
T Consensus 565 gI~elA~~iL~~~~VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 565 EIPQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp SHHHHHHHHHHTTTCEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred cHHHHHHHHhCcCCeEEecCCccccCCchHHHHHHHHHhh
Confidence 99999999994312 1224589999999999764
No 44
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.18 E-value=2.3e-11 Score=106.87 Aligned_cols=87 Identities=60% Similarity=0.959 Sum_probs=74.0
Q ss_pred HHHHHHHHhhHHHHHHhhhccccchhhhccCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhHHHHHHH
Q psy5547 219 QKAVITAKNSLESYCFNMKSTMEDEKLKDKISSAERTQILDKCNDVIKWLDSNQLAEKEEFEDKQKELEAICNPIITKLY 298 (714)
Q Consensus 219 ~~~~~~arN~LEs~iy~~r~~L~~~~~~~~~s~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~k~~eL~~~~~~i~~r~~ 298 (714)
++++.++||+||+|||.++..|.++.+...++++++++|..++.++.+||+++..++.++|+.++++|++++.||..|++
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y 92 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 92 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999997655788999999999999999999999876667899999999999999999999987
Q ss_pred hc-CCCCC
Q psy5547 299 QA-GGAPG 305 (714)
Q Consensus 299 ~~-~~rp~ 305 (714)
+. ++.|.
T Consensus 93 ~~~~~~~~ 100 (120)
T 2p32_A 93 QSAGGAPP 100 (120)
T ss_dssp CC------
T ss_pred HhccCCCC
Confidence 53 34443
No 45
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.12 E-value=5.2e-11 Score=103.73 Aligned_cols=84 Identities=65% Similarity=1.093 Sum_probs=72.5
Q ss_pred HHHHHhhHHHHHHhhhccccchhhhccCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhHHHHHHHhc-
Q psy5547 222 VITAKNSLESYCFNMKSTMEDEKLKDKISSAERTQILDKCNDVIKWLDSNQLAEKEEFEDKQKELEAICNPIITKLYQA- 300 (714)
Q Consensus 222 ~~~arN~LEs~iy~~r~~L~~~~~~~~~s~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~k~~eL~~~~~~i~~r~~~~- 300 (714)
+.++||+||+|||.++..|.++.+...++++++++|...+.++.+||+++..++.++|+.++++|++++.||..|+++.
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~ 81 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 81 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4678999999999999999754588899999999999999999999986655678999999999999999999999853
Q ss_pred CCCCC
Q psy5547 301 GGAPG 305 (714)
Q Consensus 301 ~~rp~ 305 (714)
.+.|.
T Consensus 82 ~~~~~ 86 (113)
T 1ud0_A 82 GGMPG 86 (113)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 44554
No 46
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.10 E-value=1.6e-10 Score=106.23 Aligned_cols=101 Identities=26% Similarity=0.312 Sum_probs=80.3
Q ss_pred EEEeecceeEEEEeCCeeEEeeCCCCCcccc---------cccc-eeeeeeec---------CCCcc-------cCCCCc
Q psy5547 607 LLDVTPLSLGIETAGGFELTSIPPATSRLCL---------DEVT-ASISMLTG---------YPGLC-------LPSGSQ 660 (714)
Q Consensus 607 ~~~v~~~sigi~~~~g~~~~~i~~~t~~~~~---------d~~t-~~i~~~~~---------y~g~~-------~p~g~~ 660 (714)
+.|++|+||||++.+|.|.++||+||++|+. |+++ ..+.+|.| +.|.| .|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 5689999999999999999999999999863 4554 56777765 22333 456766
Q ss_pred cc-------ccceeeee---------eeEEEEeccccccHHHHHHHHHHhhhhhhhhhhhhhh
Q psy5547 661 LV-------REDKINIT---------KTVIFVSCSQRRCIERYVEMIAIAGRCTRHRRMRYQK 707 (714)
Q Consensus 661 ~~-------~~~~l~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (714)
.+ .||.|+++ ..++++++.++||+++|++|+++|++++.++|.+-.+
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~ 144 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEK 144 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHH
Confidence 55 88888854 3688888889999999999999999999988876554
No 47
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.09 E-value=3.6e-10 Score=123.26 Aligned_cols=93 Identities=18% Similarity=0.287 Sum_probs=74.4
Q ss_pred eEEEeeCCCCCHHHHHHHHHHH-HHcCCCeeEeeechhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEEEEeC
Q psy5547 350 NAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSILTIED 428 (714)
Q Consensus 350 ~~vitVPa~~~~~~r~~l~~A~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~ 428 (714)
.+++|.|...+...|+.|.+++ +.+|++.+.++.+|.||+++++.. +-||+|+|+|+|+++.+. +
T Consensus 116 pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~------------tglVVDiG~g~T~vvPI~--~ 181 (498)
T 3qb0_A 116 PALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP------------NCLVVDIGHDTCSVSPIV--D 181 (498)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS------------SEEEEEECSSCEEEEEEE--T
T ss_pred ceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCC------------eEEEEEcCCCcEEEEEEe--C
Confidence 6999999999999999999975 779999999999999999988642 239999999999999884 3
Q ss_pred CEEEEEEecCCCCccHHHHHHHHHHHHHH
Q psy5547 429 GIFEVKSTAGDTHLGGEDFDNRMVNHFVQ 457 (714)
Q Consensus 429 ~~~~v~~~~g~~~lGG~~id~~l~~~l~~ 457 (714)
+.. +........+||.++|+.|.+++..
T Consensus 182 G~~-l~~ai~rl~vgG~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 182 GMT-LSKSTRRNFIAGKFINHLIKKALEP 209 (498)
T ss_dssp TEE-CGGGCEEESCSHHHHHHHHHHHTTT
T ss_pred CEE-ccccceeccccHHHHHHHHHHHHHh
Confidence 321 1111112579999999999998864
No 48
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.08 E-value=1e-10 Score=126.74 Aligned_cols=68 Identities=90% Similarity=1.266 Sum_probs=63.8
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
++|.++|++++++..+|+.|+||||+||+|.|++.|++.|++.++....||++|||+|||++|+++++
T Consensus 336 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 336 EPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999997788889999999999999999999854
No 49
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.03 E-value=2.1e-10 Score=124.37 Aligned_cols=68 Identities=25% Similarity=0.546 Sum_probs=61.9
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCC-cC------CCCCCCchhhHHHHHHHHHHHhC
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK-EL------NKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~-~i------~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
++|+++|++++++..+|+.|+||||+||+|+||+.|+++|+.. ++ ..++|||||||+|||++|+....
T Consensus 329 ~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 329 RLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 5789999999999999999999999999999999999999754 34 68899999999999999998743
No 50
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.02 E-value=2.4e-10 Score=123.31 Aligned_cols=66 Identities=67% Similarity=1.067 Sum_probs=62.9
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHH
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 67 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l 67 (714)
++|.++|++++++..+|+.|+|+||+||+|.|++.|++.|++.++....||++|||+|||++|+++
T Consensus 328 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l 393 (394)
T 3qfu_A 328 KPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVL 393 (394)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhh
Confidence 578999999999999999999999999999999999999977888899999999999999999987
No 51
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=98.90 E-value=7.9e-10 Score=118.73 Aligned_cols=65 Identities=52% Similarity=0.826 Sum_probs=60.6
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHH
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 67 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l 67 (714)
++|+++|+++++++.+|+.|+|+||+||+|.|++.|++.|+ .++....||++|||+|||++|++|
T Consensus 318 ~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~-~~v~~~~~p~~ava~Gaa~~a~~l 382 (383)
T 1dkg_D 318 ELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFG-KEPRKDVNPDEAVAIGAAVQGGVL 382 (383)
T ss_dssp HHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHS-SCCBCSSCTTTHHHHHHHHHTTTT
T ss_pred HHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhC-CCCCCCcChHHHHHHHHHHHHHhh
Confidence 46889999999999999999999999999999999999994 678889999999999999999876
No 52
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=98.85 E-value=4.4e-09 Score=103.26 Aligned_cols=97 Identities=26% Similarity=0.325 Sum_probs=76.1
Q ss_pred EEeecceeEEEEeCCeeEEeeCCCCCcccc---------cccc-eeeeeeecC---------CCcc-------cCCCCcc
Q psy5547 608 LDVTPLSLGIETAGGFELTSIPPATSRLCL---------DEVT-ASISMLTGY---------PGLC-------LPSGSQL 661 (714)
Q Consensus 608 ~~v~~~sigi~~~~g~~~~~i~~~t~~~~~---------d~~t-~~i~~~~~y---------~g~~-------~p~g~~~ 661 (714)
.|++|+||||++.+|.|.++||+||++|+. |+++ ..|.++.|- .|.| .|+|.|.
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 379999999999999999999999999863 4444 677777662 2333 4567775
Q ss_pred c-------ccceeeeee---------eEEEEeccccccHHHHHHHHHHhhhhhhhhhhhh
Q psy5547 662 V-------REDKINITK---------TVIFVSCSQRRCIERYVEMIAIAGRCTRHRRMRY 705 (714)
Q Consensus 662 ~-------~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (714)
+ .||.|+++. .+++++. ..||+++|++|+++|++++++++.+-
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~ 139 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKAR 139 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHH
Confidence 5 888888643 6777776 45999999999999999999877553
No 53
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=98.85 E-value=2.8e-08 Score=113.07 Aligned_cols=122 Identities=19% Similarity=0.279 Sum_probs=90.1
Q ss_pred CCCccchhhhHHHHHHHHHHH-HHhCCCC-----CeEEEeeCCCCCHHHHHHHHHHH-HHcCCCeeEeeechhHHHHHhh
Q psy5547 321 PGPTIEEVSSMVLTKMKETAE-AYLGKTV-----SNAVITVPAYFNDSQRQATKDSG-TIAGLNVLRIINEPTAAAIAYG 393 (714)
Q Consensus 321 ~~~s~eev~a~~L~~l~~~~~-~~~~~~~-----~~~vitVPa~~~~~~r~~l~~A~-~~AGl~~~~li~Ep~AAa~~~~ 393 (714)
...+.++...+ +..|++++- ..++... ..+++|.|..|+...|+.|.+.+ +..|++.+.++.++.||+++++
T Consensus 166 ~~~s~~~~wdd-~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G 244 (593)
T 4fo0_A 166 PGGSLTAVLAD-IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSG 244 (593)
T ss_dssp TTCSHHHHHHH-HHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHT
T ss_pred CccchhcCHHH-HHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCC
Confidence 34456666666 456777775 4566543 34999999999999999998864 5679999999999999999886
Q ss_pred cccccCCCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHH
Q psy5547 394 LDKKVGSAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQE 458 (714)
Q Consensus 394 ~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~ 458 (714)
.. +-+|||+|.++|.|+-+. +|.. +........+||.++++.|.+.|..+
T Consensus 245 ~~------------tglVVDiG~~~T~v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 245 LS------------STCIVDVGDQKTSVCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp CS------------EEEEEEECSSCEEEEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred CC------------ceEEEEeCCCceeeeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHhc
Confidence 43 459999999999998774 2211 11111225799999999998887653
No 54
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.22 E-value=5e-06 Score=84.08 Aligned_cols=74 Identities=23% Similarity=0.237 Sum_probs=55.4
Q ss_pred HHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHh
Q psy5547 517 EELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 595 (714)
Q Consensus 517 ~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~ 595 (714)
++++..+++.+...+.+.++..+. .+.|+++||.+++|++++.+.+.+ +.++..+.+|+.+.|.|||++|....
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~~ 258 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKKA 258 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHhh
Confidence 344445555555555444443211 378999999999999999999999 77888888888899999999997643
No 55
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=98.21 E-value=1.8e-07 Score=98.70 Aligned_cols=65 Identities=28% Similarity=0.334 Sum_probs=54.7
Q ss_pred chHHHHHHHcCCC--ccCC-CeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHH
Q psy5547 2 EPVEKSLRDAKMD--KAQI-HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 67 (714)
Q Consensus 2 ~~i~~~l~~a~l~--~~dI-d~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l 67 (714)
++|+++|++++.. .+.+ +.|+|+||+|++|.|++.|++.|+ .++....||++|||+|||++|+.+
T Consensus 259 ~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~-~~v~~~~~p~~ava~Gaa~~a~~~ 326 (344)
T 1jce_A 259 ESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETG-ISVIRSEEPLTAVAKGAGMVLDKV 326 (344)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHS-SCEEECSSTTTHHHHHHHHGGGCH
T ss_pred HHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHC-CCccccCChHHHHHHHHHHHHhCh
Confidence 4678888888643 2335 799999999999999999999995 567778899999999999999765
No 56
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.16 E-value=1e-06 Score=89.79 Aligned_cols=61 Identities=21% Similarity=0.188 Sum_probs=51.2
Q ss_pred HHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHH
Q psy5547 6 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 67 (714)
Q Consensus 6 ~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l 67 (714)
+.|...-....+++.|+|+||++++|.||+.|++.| +.++....||++++|+|||++|...
T Consensus 195 ~~l~~~~~~~~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 195 KRVSSLVKRIGVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp HHHHHHHHHHCCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHH
Confidence 333333344567899999999999999999999999 5778889999999999999999754
No 57
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.07 E-value=9e-06 Score=89.60 Aligned_cols=114 Identities=18% Similarity=0.279 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHH--HhCCCC-----CeEEEeeCCCCCHHHHHHHHHHHH-HcCCCeeEeeechhHHHHHhhcccccCCCC
Q psy5547 331 MVLTKMKETAEA--YLGKTV-----SNAVITVPAYFNDSQRQATKDSGT-IAGLNVLRIINEPTAAAIAYGLDKKVGSAA 402 (714)
Q Consensus 331 ~~L~~l~~~~~~--~~~~~~-----~~~vitVPa~~~~~~r~~l~~A~~-~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~ 402 (714)
+.++.+++++-. .++... ..+++|.|..++...|+.|.+.+. ..|++.+.++.+|.||+++++.
T Consensus 197 D~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-------- 268 (655)
T 4am6_A 197 SDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-------- 268 (655)
T ss_dssp HHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC--------
T ss_pred HHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC--------
Confidence 345666666654 454433 469999999999999999999875 5899999999999999988753
Q ss_pred CCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHH
Q psy5547 403 GSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQE 458 (714)
Q Consensus 403 ~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~ 458 (714)
..+-+|||+|+|+|+++.+. +|.. +........+||.++|+.|.+++..+
T Consensus 269 ---~ttGLVVDiG~g~T~VvPV~--eG~v-l~~ai~rL~iGG~dLT~yL~kLL~~r 318 (655)
T 4am6_A 269 ---STSTCVVNIGAAETRIACVD--EGTV-LEHSAITLDYGGDDITRLFALFLLQS 318 (655)
T ss_dssp ---SSCEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred ---CCceEEEcCCCceEEEEEEe--CCEE-EhhheeeecchHHHHHHHHHHHHHHc
Confidence 12459999999999999884 3321 11111125799999999999888654
No 58
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=97.84 E-value=1.3e-05 Score=71.36 Aligned_cols=48 Identities=42% Similarity=0.546 Sum_probs=35.0
Q ss_pred ccceEEEEeecceeEEEEeCCeeEEeeCCCCCcccc---------cccc-eeeeeeec
Q psy5547 602 VQDLLLLDVTPLSLGIETAGGFELTSIPPATSRLCL---------DEVT-ASISMLTG 649 (714)
Q Consensus 602 ~~~~~~~~v~~~sigi~~~~g~~~~~i~~~t~~~~~---------d~~t-~~i~~~~~ 649 (714)
++++.+.|++|+||||++.+|.|.++||+||++|+. |+++ ..+.+|.|
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqG 71 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQG 71 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEEC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEe
Confidence 457789999999999999999999999999999874 4444 56777765
No 59
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.78 E-value=1e-05 Score=81.94 Aligned_cols=47 Identities=26% Similarity=0.430 Sum_probs=43.2
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 64 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~a 64 (714)
+++.|+|+||++++|.+++.|++.| +.++....||++++|+|||++|
T Consensus 226 ~~~~ivL~GG~a~~~~l~~~l~~~l-~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 226 QTLPVYVVGGTAYLTGFSEEFSRFL-GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SSCCEEEESGGGGSTTHHHHHHHHH-SSCCBCCSSGGGHHHHHHHTTC
T ss_pred CCCEEEEECCccchhhHHHHHHHHh-CCCccccCChHHHHHHHHHhcC
Confidence 5889999999999999999999999 5677788999999999999874
No 60
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.34 E-value=0.0021 Score=64.60 Aligned_cols=47 Identities=21% Similarity=0.214 Sum_probs=41.8
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHHc--CCCcccCCCCCchhhHhhHHHHH
Q psy5547 545 IHDIVLVGG-STRIPKVQKLLQDFF--NGKELNKSINPDEAVAYGAAVQA 591 (714)
Q Consensus 545 i~~ViLvGG-~s~~p~l~~~l~~~f--~~~~v~~~~~p~~ava~GAa~~a 591 (714)
++.|+++|| .+..|.+++.+.+.+ .+.++..+.+|....|.|||+.+
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 456999999 899999999999984 57788889999999999999864
No 61
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=97.29 E-value=0.00013 Score=75.66 Aligned_cols=48 Identities=10% Similarity=0.221 Sum_probs=42.0
Q ss_pred ccCCCeEEEecCCcCcHHHHHHHHHHcCCC--cCCCCCCCchhhHHHHHHHH
Q psy5547 15 KAQIHDIVLVGGSTRIPKVQKLLQDFFNGK--ELNKSINPDEAVAYGAAVQA 64 (714)
Q Consensus 15 ~~dId~V~LvGGssriP~vq~~l~~~f~~~--~i~~~~n~deaVA~GAA~~a 64 (714)
..+++.|+|+||+|++ +++.|++.|+.. ++....||++|+|+||+++|
T Consensus 270 ~~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 270 FSGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred hcCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 3689999999999998 999999999642 46678899999999999876
No 62
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=97.19 E-value=0.00011 Score=76.94 Aligned_cols=59 Identities=20% Similarity=0.300 Sum_probs=47.7
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcC-CCCCCCchhhHHHHHHHHH
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKEL-NKSINPDEAVAYGAAVQAA 65 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i-~~~~n~deaVA~GAA~~aa 65 (714)
++|+++|+++ .++++.|+|+||++++ +++.|++.|+...+ ....||++|+|+|+..++.
T Consensus 284 ~~i~~~l~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 284 ENIRLNLRGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp HHHHHHHGGG---GGGEEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHhh---hhcccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 4667777776 6789999999999999 99999999963322 2256999999999998763
No 63
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.18 E-value=0.0033 Score=64.99 Aligned_cols=70 Identities=17% Similarity=0.062 Sum_probs=51.5
Q ss_pred HHHHHHHHhhhhhHHHHHH----HHcCCCccccceEEEEcC-CCCcHHHHHHHHHHc-----CCCcccCCCCCchhhHhh
Q psy5547 517 EELNADLFRGTMEPVEKSL----RDAKMDKAQIHDIVLVGG-STRIPKVQKLLQDFF-----NGKELNKSINPDEAVAYG 586 (714)
Q Consensus 517 ~~~~~~~~~~i~~~i~~~l----~~~~~~~~~i~~ViLvGG-~s~~p~l~~~l~~~f-----~~~~v~~~~~p~~ava~G 586 (714)
++++..++..+.+.|-.+. +.. .++.|+++|| .+..|++++.|++.+ .+.++..+.+|..+-|.|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~-----~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNE-----NIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-----TCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 4445555555554444332 222 3456999999 999999999999997 356788888999999999
Q ss_pred HHHHH
Q psy5547 587 AAVQA 591 (714)
Q Consensus 587 Aa~~a 591 (714)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 64
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=96.93 E-value=0.00021 Score=76.73 Aligned_cols=65 Identities=22% Similarity=0.405 Sum_probs=49.0
Q ss_pred chHHHHHHHcCCC------ccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCC--C---------------CCCCchhhHH
Q psy5547 2 EPVEKSLRDAKMD------KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN--K---------------SINPDEAVAY 58 (714)
Q Consensus 2 ~~i~~~l~~a~l~------~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~--~---------------~~n~deaVA~ 58 (714)
+.|.++|+.++++ ...++.|+|+||+|+||.+++.+++.|+ .++. . --+|.-+.|.
T Consensus 307 ~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g-~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~ 385 (419)
T 4a2a_A 307 SKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK-SPVRTGCYANSDRPSIINADEVANDPSFAAAF 385 (419)
T ss_dssp HHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT-SCEEECCGGGSSSCCCBTCHHHHTCGGGHHHH
T ss_pred HHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC-CCeEEEecCCCCchhccCcccccCCchHHHHH
Confidence 4688999999984 5678999999999999999999999995 3331 1 1478899999
Q ss_pred HHHHHHHHH
Q psy5547 59 GAAVQAAIL 67 (714)
Q Consensus 59 GAA~~aa~l 67 (714)
|.+++++..
T Consensus 386 Gl~~~~~~~ 394 (419)
T 4a2a_A 386 GNVFAVSEN 394 (419)
T ss_dssp HTTCC----
T ss_pred HHHHHHhhc
Confidence 999988654
No 65
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=96.91 E-value=0.00043 Score=73.57 Aligned_cols=53 Identities=28% Similarity=0.433 Sum_probs=38.8
Q ss_pred chHHHHHHH--cCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhh
Q psy5547 2 EPVEKSLRD--AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAV 56 (714)
Q Consensus 2 ~~i~~~l~~--a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaV 56 (714)
+.|+++|+. +++...+++.|+|+||+|++|.+++.|++.|+ .++.. .||+++|
T Consensus 289 ~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~-~~v~~-~~P~~~v 343 (377)
T 2ych_A 289 QELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG-VNLEP-VNPWEAV 343 (377)
T ss_dssp HHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT-SEEEE-CCGGGGS
T ss_pred HHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC-CCeEe-cCchhhc
Confidence 356777874 46777899999999999999999999999995 44433 3665543
No 66
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=96.87 E-value=0.00021 Score=75.94 Aligned_cols=63 Identities=17% Similarity=0.234 Sum_probs=49.3
Q ss_pred hHHHHHHHc--CCCccCCCeEEEecCCcCcHHHHHHHHHHcCC-------CcCCCCCCCchhhHHHHHHHHH
Q psy5547 3 PVEKSLRDA--KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQAA 65 (714)
Q Consensus 3 ~i~~~l~~a--~l~~~dId~V~LvGGssriP~vq~~l~~~f~~-------~~i~~~~n~deaVA~GAA~~aa 65 (714)
.|.++|.++ .+..+.++.|+|+||+|++|.+++.|.+.++. .++....||+.+|++||+++|.
T Consensus 277 ~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 277 TTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 456677755 34455679999999999999999999987741 2333567999999999999997
No 67
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.35 E-value=0.0066 Score=67.77 Aligned_cols=85 Identities=14% Similarity=0.151 Sum_probs=66.1
Q ss_pred ecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHH
Q psy5547 511 VTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQ 590 (714)
Q Consensus 511 itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~ 590 (714)
-++.++..++..+++.+.-.++..++........++.|.++||+++++.+.+.+.+.| +.+|..+ ...++.|.|||+.
T Consensus 409 ~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA~l 486 (554)
T 3l0q_A 409 TTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSAMM 486 (554)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHHHH
Confidence 4688876556677777766666666544333456789999999999999999999999 8888766 4567899999999
Q ss_pred HHHHhCC
Q psy5547 591 AAILHGD 597 (714)
Q Consensus 591 a~~l~~~ 597 (714)
|+.-.|.
T Consensus 487 A~~a~G~ 493 (554)
T 3l0q_A 487 GTVAAGV 493 (554)
T ss_dssp HHHHTTS
T ss_pred HHHHcCC
Confidence 9987764
No 68
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.16 E-value=0.0081 Score=65.89 Aligned_cols=79 Identities=23% Similarity=0.302 Sum_probs=58.7
Q ss_pred HHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCC
Q psy5547 518 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 597 (714)
Q Consensus 518 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~ 597 (714)
.++..+++.+.-.++..++........++.|.++||+++++.+.+.+.+.+ +.+|..+..++.+.|.|||+.|+.-.|.
T Consensus 360 ~~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA~~~~g~ 438 (484)
T 2itm_A 360 ELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAANP 438 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHHHHHcCC
Confidence 345555555555555555544323345788999999999999999999999 8888877666656899999999877664
No 69
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.04 E-value=0.012 Score=65.52 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=62.5
Q ss_pred HHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhC
Q psy5547 517 EELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 596 (714)
Q Consensus 517 ~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 596 (714)
..++..+++.+.-.++..++........++.|.++||+++++++.+.+.+.| +.+|..+ .+.++.|+|||+.|+.-.|
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHhC
Confidence 4556667777777777777766655556789999999999999999999999 7887665 4577999999999987654
No 70
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.01 E-value=0.011 Score=65.01 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=57.7
Q ss_pred HHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCC
Q psy5547 518 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 597 (714)
Q Consensus 518 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~ 597 (714)
.++..+++.+.-.++..++........++.|.++||+++++.+.+.+.+.| +.+|..+ .+.++.|.|||+.|+.-.|.
T Consensus 367 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~ 444 (504)
T 3ll3_A 367 EMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLARQALGL 444 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHHHHHcCc
Confidence 334555555555555554443222335789999999999999999999999 8888665 45678999999999977664
No 71
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.99 E-value=0.012 Score=64.67 Aligned_cols=77 Identities=17% Similarity=0.212 Sum_probs=59.6
Q ss_pred HHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCC
Q psy5547 518 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 597 (714)
Q Consensus 518 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~ 597 (714)
.++..+++.+.-.++..++...... .++.|.++||+++++.+.+.+.+.| +.+|..+. +.++.|.|||+.|+.-.|.
T Consensus 368 ~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~-~~e~~alGaA~lA~~~~g~ 444 (497)
T 2zf5_O 368 HLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRPV-VKETTALGAAYLAGLAVDY 444 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEES-CSCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEcC-CCcchHHHHHHHHHHHhCc
Confidence 3455666666666666666554433 6789999999999999999999999 78887664 4558999999999877663
No 72
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=95.97 E-value=0.0019 Score=69.60 Aligned_cols=64 Identities=23% Similarity=0.324 Sum_probs=48.1
Q ss_pred chHHHHHHHcC--CCccCCCeEEEecCCcCcHHHHHHHHHHcCCC-----------------------cCCCCCCCchhh
Q psy5547 2 EPVEKSLRDAK--MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK-----------------------ELNKSINPDEAV 56 (714)
Q Consensus 2 ~~i~~~l~~a~--l~~~dId~V~LvGGssriP~vq~~l~~~f~~~-----------------------~i~~~~n~deaV 56 (714)
+.|.++|.++. +..+.++.|+|+||+|++|.+++.|.+.++.. ++....++..++
T Consensus 298 ~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~ 377 (418)
T 1k8k_A 298 EVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAV 377 (418)
T ss_dssp HHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHH
T ss_pred HHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccce
Confidence 35677787754 55677899999999999999999988765311 122234677999
Q ss_pred HHHHHHHHH
Q psy5547 57 AYGAAVQAA 65 (714)
Q Consensus 57 A~GAA~~aa 65 (714)
.+||+++|.
T Consensus 378 w~Ggsilas 386 (418)
T 1k8k_A 378 WFGGSMLAS 386 (418)
T ss_dssp HHHHHHHTT
T ss_pred eHhHHHHHc
Confidence 999999985
No 73
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.88 E-value=0.014 Score=64.45 Aligned_cols=76 Identities=17% Similarity=0.156 Sum_probs=59.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcc-cCCCCCchhhHhhHHHHHHHHhC
Q psy5547 518 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKEL-NKSINPDEAVAYGAAVQAAILHG 596 (714)
Q Consensus 518 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v-~~~~~p~~ava~GAa~~a~~l~~ 596 (714)
.++..+++.+.-.++..++.... .. ++.|.++||+++++.+.+.+.+.| +.+| ..+ .+.++.|.|||+.|+.-.|
T Consensus 378 ~l~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~-~~~e~~alGaA~lA~~a~G 453 (511)
T 3hz6_A 378 QILLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVKP-DAHLHPLRGLAALAAVELE 453 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEECC-CGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEec-CCCCchHHHHHHHHHHHhC
Confidence 34556666666666666655443 44 889999999999999999999999 8888 554 5888999999999998776
Q ss_pred C
Q psy5547 597 D 597 (714)
Q Consensus 597 ~ 597 (714)
.
T Consensus 454 ~ 454 (511)
T 3hz6_A 454 W 454 (511)
T ss_dssp S
T ss_pred C
Confidence 4
No 74
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.87 E-value=0.01 Score=65.54 Aligned_cols=78 Identities=27% Similarity=0.389 Sum_probs=55.4
Q ss_pred HHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCC
Q psy5547 518 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 597 (714)
Q Consensus 518 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~ 597 (714)
.++..+++.+.-.++..++........++.|.++||+++++.+.+.+.+.| +.+|..+ .+.++.|.|||+.|+.-.|.
T Consensus 398 ~l~RAvlEgia~~~r~~l~~l~~~g~~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G~ 475 (515)
T 3i8b_A 398 NLARAFVEGLLCSQRDCLELIRSLGASITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAARQAAWVLSG 475 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHHHHHHHHcCC
Confidence 334455555544444443322212345789999999999999999999999 7887665 45668899999999876654
No 75
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.62 E-value=0.015 Score=64.00 Aligned_cols=77 Identities=13% Similarity=0.201 Sum_probs=55.9
Q ss_pred HHHHHHhhhhhHHHHHHHHcCC-CccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCC
Q psy5547 519 LNADLFRGTMEPVEKSLRDAKM-DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 597 (714)
Q Consensus 519 ~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~ 597 (714)
++..+++.+.-.++..++.... ....++.|.++||+++++++.+.+.+.| +.+|..+ .+.++.|.|||+.|+.-.|.
T Consensus 378 l~RAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G~ 455 (501)
T 3g25_A 378 FIRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFLAGLAVGF 455 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHHHHHHhCc
Confidence 3445555555444444443221 1234789999999999999999999999 7887655 46678999999999987764
No 76
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.58 E-value=0.015 Score=65.18 Aligned_cols=80 Identities=16% Similarity=0.262 Sum_probs=59.8
Q ss_pred cHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCC-CcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHH
Q psy5547 512 TRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQ 590 (714)
Q Consensus 512 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~ 590 (714)
++.+ ++..+++.+.-.++..++........++.|.++||++ +++++.+.+.+.| +.+|..+ .+.++.|.|||+.
T Consensus 410 t~~~---l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEE---IYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHH---HHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHHH
Confidence 4554 4555566665555555544332344578999999999 9999999999999 7887655 4678999999999
Q ss_pred HHHHhC
Q psy5547 591 AAILHG 596 (714)
Q Consensus 591 a~~l~~ 596 (714)
|+.-.|
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998776
No 77
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.56 E-value=0.013 Score=64.84 Aligned_cols=77 Identities=17% Similarity=0.239 Sum_probs=56.0
Q ss_pred HHHHHHhhhhhHHHHHHHHcC-CCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCC
Q psy5547 519 LNADLFRGTMEPVEKSLRDAK-MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 597 (714)
Q Consensus 519 ~~~~~~~~i~~~i~~~l~~~~-~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~ 597 (714)
++..+++.+.-.++..++... .....++.|.++||+++++++.+.+.+.| +.+|..+ ...++.|+|||+.|+.-.|.
T Consensus 376 i~RAvlEgia~~~r~~le~l~~~~g~~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~lA~~a~G~ 453 (526)
T 3ezw_A 376 IIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVGF 453 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHHHHHHHhCC
Confidence 344455555444444443321 11245789999999999999999999999 8888766 45678999999999988775
No 78
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=95.50 E-value=0.013 Score=60.62 Aligned_cols=61 Identities=13% Similarity=0.192 Sum_probs=48.8
Q ss_pred HHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHH
Q psy5547 4 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 67 (714)
Q Consensus 4 i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l 67 (714)
|.+.+++++..++.++.|+|+||++.+ +++.|++.|+ ..+...-||..|+|+|+..++...
T Consensus 265 I~~~i~~~~~~~~~~~~IvltGGGA~l--~~~~l~~~~~-~~v~v~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 265 AIKLIEKRGFKLDQLDSLIFIGGTTQK--LKEQISKTYP-NNSIITNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp HHHHHHHHTCCTTSCSEEEEESTTHHH--HHHHHHHHST-TCEECCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHccEEEEECChHHH--HHHHHHHHcC-CCCEecCCChhhHHHHHHHHHhhh
Confidence 344555557777779999999999998 5699999995 345567799999999999887654
No 79
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.50 E-value=0.013 Score=64.86 Aligned_cols=76 Identities=14% Similarity=0.098 Sum_probs=53.7
Q ss_pred HHHHHHhhhhhHHHHHHHHcCC----CccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHH
Q psy5547 519 LNADLFRGTMEPVEKSLRDAKM----DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 594 (714)
Q Consensus 519 ~~~~~~~~i~~~i~~~l~~~~~----~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l 594 (714)
++..+++.+.-.++..++.... .. .++.|.++||+++++.+.+.+.+.| +.+|..+ .+.++.|.|||+.|+.-
T Consensus 397 l~RAvlEgia~~~r~~l~~l~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a 473 (520)
T 4e1j_A 397 FARAALEAVCYQTRDLLEAMHKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSR 473 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC------CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCC-CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHH
Confidence 3445555554444444443221 12 5788999999999999999999999 7888665 45678999999999987
Q ss_pred hCC
Q psy5547 595 HGD 597 (714)
Q Consensus 595 ~~~ 597 (714)
.|.
T Consensus 474 ~G~ 476 (520)
T 4e1j_A 474 AGV 476 (520)
T ss_dssp HTS
T ss_pred cCC
Confidence 765
No 80
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.48 E-value=0.014 Score=64.32 Aligned_cols=81 Identities=21% Similarity=0.147 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHH
Q psy5547 512 TRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 591 (714)
Q Consensus 512 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a 591 (714)
++.++ +..+++.+.-.++..++........++.|.++||+++++.+.+.+.+.| +.+|..+.. .++.|.|||+.|
T Consensus 371 ~~~~l---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHL---WRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAAWVA 445 (508)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHHHHH
Confidence 45444 4444444444333333322111234788999999999999999999999 888877654 458899999999
Q ss_pred HHHhCC
Q psy5547 592 AILHGD 597 (714)
Q Consensus 592 ~~l~~~ 597 (714)
+.-.|.
T Consensus 446 ~~a~G~ 451 (508)
T 3ifr_A 446 AIGGGD 451 (508)
T ss_dssp HHHTCS
T ss_pred HHHhCC
Confidence 987764
No 81
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=95.47 E-value=0.0069 Score=63.37 Aligned_cols=57 Identities=16% Similarity=0.224 Sum_probs=46.7
Q ss_pred HHHHcCCCccCCCeEEEecCCcCcHH--HHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHh
Q psy5547 7 SLRDAKMDKAQIHDIVLVGGSTRIPK--VQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 68 (714)
Q Consensus 7 ~l~~a~l~~~dId~V~LvGGssriP~--vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~ 68 (714)
.+++..-.++.++.|+|+||++.++. +++.|++.|+.. .||..|+|+|+..++..+.
T Consensus 280 ~i~~~l~~~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~-----~~p~~anA~G~~~~~~~~~ 338 (355)
T 3js6_A 280 NFEITVGNINSIDRIIVTGGGANIHFDSLSHYYSDVFEKA-----DDSQFSNVRGYEKLGELLK 338 (355)
T ss_dssp HHHHHTCCTTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-----SSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHhhchhhccEEEEECcchhcchhhHHHHHHHHCCCC-----CCcHHHHHHHHHHHHHHHH
Confidence 34444434688999999999999998 999999988432 8999999999999998774
No 82
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.45 E-value=0.015 Score=64.05 Aligned_cols=77 Identities=17% Similarity=0.249 Sum_probs=55.4
Q ss_pred HHHHHHhhhhhHHHHHHHHcCC-CccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhCC
Q psy5547 519 LNADLFRGTMEPVEKSLRDAKM-DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 597 (714)
Q Consensus 519 ~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~~ 597 (714)
++..+++.+.-.++..++.... ....++.|.++||+++++.+.+.+.+.| +.+|..+ .+.++.|.|||+.|+.-.|.
T Consensus 375 l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~ 452 (510)
T 2p3r_A 375 IIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVGF 452 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHHhCc
Confidence 3444555554444444443221 1234788999999999999999999999 7887665 46678999999999987764
No 83
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.43 E-value=0.017 Score=63.56 Aligned_cols=81 Identities=17% Similarity=0.222 Sum_probs=57.1
Q ss_pred cHHHHHHHHHHHHhhhhhHHHHHHHHcCC-CccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHH
Q psy5547 512 TRARFEELNADLFRGTMEPVEKSLRDAKM-DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQ 590 (714)
Q Consensus 512 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~ 590 (714)
++.++ +..+++.+.-.++..++.... ....++.|.++||+++++.+.+.+.+.| +.+|..+ .+.++.|.|||+.
T Consensus 373 ~~~~l---~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 447 (506)
T 3h3n_X 373 TKEDF---VRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYL 447 (506)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHH
Confidence 45444 444455554444444433221 1234788999999999999999999999 7887665 5677999999999
Q ss_pred HHHHhCC
Q psy5547 591 AAILHGD 597 (714)
Q Consensus 591 a~~l~~~ 597 (714)
|+.-.|.
T Consensus 448 A~~a~G~ 454 (506)
T 3h3n_X 448 AGLAVGF 454 (506)
T ss_dssp HHHHTTS
T ss_pred HHHHhCc
Confidence 9987764
No 84
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.35 E-value=0.027 Score=61.83 Aligned_cols=78 Identities=19% Similarity=0.233 Sum_probs=57.0
Q ss_pred HHHHHHHhhhhhHHHHHHHHcCC-CccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhC
Q psy5547 518 ELNADLFRGTMEPVEKSLRDAKM-DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 596 (714)
Q Consensus 518 ~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 596 (714)
.++..+++.+.-.++..++.... ....++.|.++||+++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.|
T Consensus 371 ~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 371 HLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALMAGVGAG 448 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHHHHhhcC
Confidence 34445555555555555554321 2345678999999999999999999999 7888665 4556899999999987766
Q ss_pred C
Q psy5547 597 D 597 (714)
Q Consensus 597 ~ 597 (714)
.
T Consensus 449 ~ 449 (495)
T 2dpn_A 449 A 449 (495)
T ss_dssp S
T ss_pred c
Confidence 4
No 85
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.08 E-value=0.024 Score=62.35 Aligned_cols=81 Identities=17% Similarity=0.224 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHHHhhhhhHHHHHHHHcCC-CccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHH
Q psy5547 512 TRARFEELNADLFRGTMEPVEKSLRDAKM-DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQ 590 (714)
Q Consensus 512 tr~~~~~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~ 590 (714)
++.++ +..+++.+.-.++..++.... ....++.|.++||+++++.+.+.+.+.| +.+|..+ .+.++.|.|||+.
T Consensus 373 ~~~~l---~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 447 (504)
T 2d4w_A 373 NRNHI---ARAALEATAFQSREVVDAMNADSGVDLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYA 447 (504)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHHSCCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHH
Confidence 45443 344444444444444433211 1234688999999999999999999999 7888665 4567899999999
Q ss_pred HHHHhCC
Q psy5547 591 AAILHGD 597 (714)
Q Consensus 591 a~~l~~~ 597 (714)
|+.-.|.
T Consensus 448 A~~~~G~ 454 (504)
T 2d4w_A 448 AGIAVGF 454 (504)
T ss_dssp HHHHHTS
T ss_pred HHhhcCc
Confidence 9877764
No 86
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.85 E-value=0.031 Score=61.51 Aligned_cols=77 Identities=18% Similarity=0.198 Sum_probs=54.0
Q ss_pred HHHHHHhhhhhHHHHHHHHcCC-Ccccc-ceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHhC
Q psy5547 519 LNADLFRGTMEPVEKSLRDAKM-DKAQI-HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 596 (714)
Q Consensus 519 ~~~~~~~~i~~~i~~~l~~~~~-~~~~i-~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 596 (714)
++..+++.+.-.++..++.... ....+ +.|.++||.++++.+.+.+.+.+ +.+|..+ .+.++.|.|||+.|+.-.|
T Consensus 380 l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~~~G 457 (503)
T 2w40_A 380 IVRALLEGIAFQLNEIVDSLTSDMGIEMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAGLEVK 457 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHHHHhC
Confidence 3444455554444444433211 11235 78999999999999999999999 7887665 4556899999999987766
Q ss_pred C
Q psy5547 597 D 597 (714)
Q Consensus 597 ~ 597 (714)
.
T Consensus 458 ~ 458 (503)
T 2w40_A 458 I 458 (503)
T ss_dssp C
T ss_pred c
Confidence 3
No 87
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=94.59 E-value=0.2 Score=51.15 Aligned_cols=80 Identities=15% Similarity=0.109 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCC
Q psy5547 362 SQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 441 (714)
Q Consensus 362 ~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~ 441 (714)
+....+.++-+..|++.-.+-.|.+|...+.+...... .....+|+|+|||+|.+++.+ ++.+.. ..+.+
T Consensus 98 N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~-----~~~~~lvvDIGGGStEl~~~~--~~~~~~---~~Sl~ 167 (315)
T 1t6c_A 98 NAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK-----PEGEVCVVDQGGGSTEYVFGK--GYKVRE---VISLP 167 (315)
T ss_dssp THHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC-----CCSEEEEEEEETTEEEEEEEE--TTEEEE---EEEEC
T ss_pred CHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc-----cCCCEEEEEeCCCcEEEEEEe--CCceee---EEEEe
Confidence 34455555555789987666666777665555443321 245689999999999999975 443322 22368
Q ss_pred ccHHHHHHHH
Q psy5547 442 LGGEDFDNRM 451 (714)
Q Consensus 442 lGG~~id~~l 451 (714)
+|+..+.+.+
T Consensus 168 ~G~v~l~e~~ 177 (315)
T 1t6c_A 168 IGIVNLTETF 177 (315)
T ss_dssp CCHHHHHHHH
T ss_pred ccHHHHHHHh
Confidence 9999888775
No 88
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=94.19 E-value=0.039 Score=55.29 Aligned_cols=49 Identities=29% Similarity=0.317 Sum_probs=42.2
Q ss_pred CCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHH
Q psy5547 18 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 67 (714)
Q Consensus 18 Id~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l 67 (714)
.+.|+++||.++.|.+++.+.+.+ +.++....+++.+.|+|||+.|...
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 378999999999999999999999 4566666667778999999999764
No 89
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.16 E-value=0.053 Score=59.44 Aligned_cols=79 Identities=15% Similarity=0.146 Sum_probs=52.6
Q ss_pred ecHHHHHHHHHHHHhhhhhHHHHHHHHcCC-CccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHH
Q psy5547 511 VTRARFEELNADLFRGTMEPVEKSLRDAKM-DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAV 589 (714)
Q Consensus 511 itr~~~~~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~ 589 (714)
-++.+| +..+++.+.-.++..++.... ....++.|.++||+++++++.+.+.+.| +.+|..+. .++.+.|||+
T Consensus 362 ~t~~~l---~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~ 435 (489)
T 2uyt_A 362 ESDAEL---ARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIG 435 (489)
T ss_dssp CSHHHH---HHHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHH
Confidence 355554 344444444444444433211 1234688999999999999999999999 78886553 5889999976
Q ss_pred HHHHHh
Q psy5547 590 QAAILH 595 (714)
Q Consensus 590 ~a~~l~ 595 (714)
.|..-.
T Consensus 436 ~A~~a~ 441 (489)
T 2uyt_A 436 IQLMTL 441 (489)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 665433
No 90
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=94.11 E-value=0.063 Score=59.54 Aligned_cols=60 Identities=17% Similarity=0.219 Sum_probs=47.6
Q ss_pred HHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHH
Q psy5547 6 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 67 (714)
Q Consensus 6 ~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l 67 (714)
..++..+.....++.|.++||.+|-|.+.+++.+.| +.++. ...+.|+.|+|||+.|+.-
T Consensus 423 ~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~-~~~~~e~~alGaA~lA~~a 482 (538)
T 4bc3_A 423 IHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVY-VIDTANSACVGSAYRAFHG 482 (538)
T ss_dssp HHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEE-ECCCTTHHHHHHHHHHHHH
T ss_pred HHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceE-ecCCCCchHHHHHHHHHHH
Confidence 344444444456889999999999999999999999 46663 3467899999999999764
No 91
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=94.07 E-value=0.059 Score=59.37 Aligned_cols=59 Identities=29% Similarity=0.413 Sum_probs=47.4
Q ss_pred HHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHh
Q psy5547 5 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 68 (714)
Q Consensus 5 ~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~ 68 (714)
-+.|++.|. .++.|.++||.+|-|.+.+++.+.|| .++.. ..+.|+.|+|||+.|+.-.
T Consensus 415 l~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg-~pV~~-~~~~e~~alGAA~lA~~a~ 473 (515)
T 3i8b_A 415 LELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILG-MDVTR-PATDEYVAIGAARQAAWVL 473 (515)
T ss_dssp HHHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHT-SCEEE-ECCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhC-CceEe-cCCcccHHHHHHHHHHHHc
Confidence 345666665 47899999999999999999999994 66643 4677899999999998653
No 92
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=93.80 E-value=0.059 Score=60.05 Aligned_cols=60 Identities=18% Similarity=0.277 Sum_probs=47.9
Q ss_pred HHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 5 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 5 ~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
-++|++.|. .++.|.++||.+|-|.+.+++.+.| +.++.. ....|+.|+|||+.|+.-.+
T Consensus 433 ~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~-~~~~e~~alGAA~lA~~a~G 492 (554)
T 3l0q_A 433 IETMNQNGY---NIDTMMASGGGTKNPIFVQEHANAT-GCAMLL-PEESEAMLLGSAMMGTVAAG 492 (554)
T ss_dssp HHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHH-CCEEEE-ESCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhh-CCeEEe-cCCCcchHHHHHHHHHHHcC
Confidence 345556554 4789999999999999999999999 466643 45678999999999987543
No 93
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=93.79 E-value=0.066 Score=58.86 Aligned_cols=59 Identities=17% Similarity=0.174 Sum_probs=47.4
Q ss_pred HHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 6 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 6 ~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
+.|++.+. .++.|.++||.+|-|.+.+++.+.| +.++.. ..+.|+.|+|||+.|+.-.+
T Consensus 385 ~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~-~~~~e~~alGaA~lA~~a~G 443 (504)
T 3ll3_A 385 SNLIKNTK---KPVAINATGGFLKSDFVRQLCANIF-NVPIVT-MKEQQSGTLAAMFLARQALG 443 (504)
T ss_dssp HHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHH-TSCEEE-ESCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhh-CCeEEe-cCCCCchhHHHHHHHHHHcC
Confidence 44555553 5899999999999999999999999 466643 45788999999999987543
No 94
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=93.49 E-value=0.061 Score=59.21 Aligned_cols=51 Identities=20% Similarity=0.176 Sum_probs=43.4
Q ss_pred CCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 18 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 18 Id~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
++.|.++||.+|-|.+.+++.+.| +.++.....+.|+.|+|||+.|+.-.+
T Consensus 403 ~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~~~e~~alGaA~lA~~a~G 453 (511)
T 3hz6_A 403 VGLLKVVGGGARSEAWLRMIADNL-NVSLLVKPDAHLHPLRGLAALAAVELE 453 (511)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHH-TCEEEECCCGGGHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEecCCCCchHHHHHHHHHHHhC
Confidence 889999999999999999999999 466613346899999999999987543
No 95
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=93.09 E-value=0.086 Score=57.97 Aligned_cols=60 Identities=23% Similarity=0.161 Sum_probs=47.3
Q ss_pred HHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 5 EKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 5 ~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
-+.|++.|.. ++.|.++||.+|-|.+.+++.+.| +.++... ...|+.|+|||+.|+.-.+
T Consensus 391 ~~~l~~~g~~---~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 450 (508)
T 3ifr_A 391 VAVLDDIGHA---PQRFFASDGGTRSRVWMGIMADVL-QRPVQLL-ANPLGSAVGAAWVAAIGGG 450 (508)
T ss_dssp HHHHHHHTCC---CCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-ECCSTHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCC---CCEEEEeCCcccCHHHHHHHHHHh-CCeEEec-CCCCchHHHHHHHHHHHhC
Confidence 3455666653 789999999999999999999999 4666433 4567999999999987543
No 96
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=92.95 E-value=0.1 Score=57.74 Aligned_cols=55 Identities=24% Similarity=0.395 Sum_probs=45.4
Q ss_pred HcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 10 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 10 ~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
.+|.. ++.|.++||.+|-|.+.+++.+.| +.++.+ ....|+.|+|||+.|+.=.+
T Consensus 398 ~~g~~---~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~-~~~~E~~alGAA~lA~~a~G 452 (526)
T 3ezw_A 398 DSGIR---LHALRVDGGAVANNFLMQFQSDIL-GTRVER-PEVREVTALGAAYLAGLAVG 452 (526)
T ss_dssp HHCCC---CSEEEEESGGGGCHHHHHHHHHHH-TSEEEE-ESCCCHHHHHHHHHHHHHTT
T ss_pred hcCCC---CCEEEEECchhhCHHHHHHHHHHH-CCEEEe-CCCCchHHHHHHHHHHHHhC
Confidence 35654 789999999999999999999999 566643 45678999999999987643
No 97
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=92.89 E-value=0.099 Score=57.14 Aligned_cols=60 Identities=25% Similarity=0.373 Sum_probs=45.6
Q ss_pred HHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 6 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 6 ~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
+.|++.|. .++.|.++||.+|-|.+.+++.+.+ +.++...-+.+.+.|+|||+.|+.-.+
T Consensus 378 ~~l~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 378 DVVHACGI---KPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp HHHHTTTC---CCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHcCC---CcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHHHHHcC
Confidence 34444443 4688999999999999999999999 567755444443589999999986543
No 98
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=92.87 E-value=0.078 Score=59.25 Aligned_cols=59 Identities=19% Similarity=0.392 Sum_probs=47.4
Q ss_pred HHHHHcCCCccCCCeEEEecCCc-CcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 6 KSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 6 ~~l~~a~l~~~dId~V~LvGGss-riP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
+.|++.|. .++.|.++||.+ |-|...+++.+.| +.++. ...+.|+.|+|||+.|+.-.+
T Consensus 431 ~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~-~~~~~e~~alGaA~lA~~a~G 490 (572)
T 3jvp_A 431 DAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVT-NREIK-VAASKQTPALGAAMFASVAAG 490 (572)
T ss_dssp HHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHH-TSCEE-EBCCSSHHHHHHHHHHHHHHC
T ss_pred HHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHH-CCeeE-ecCCCccHHHHHHHHHHHhcC
Confidence 45555554 478999999999 9999999999999 46663 345789999999999987543
No 99
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=92.86 E-value=0.11 Score=56.96 Aligned_cols=59 Identities=17% Similarity=0.347 Sum_probs=46.7
Q ss_pred HHHHH-cCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 6 KSLRD-AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 6 ~~l~~-a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
+.|++ .|. .++.|.++||.+|-|.+.+++.+.| +.++.. ..+.|+.|+|||+.|+.-.+
T Consensus 395 ~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~-~~~~e~~alGaA~la~~a~G 454 (501)
T 3g25_A 395 EAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIV-NTSVER-PEIQETTALGAAFLAGLAVG 454 (501)
T ss_dssp HHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEE-ESCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHh-CCceEe-cCCCcchHHHHHHHHHHHhC
Confidence 34444 454 4789999999999999999999999 466633 45788999999999987543
No 100
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=92.70 E-value=0.024 Score=60.22 Aligned_cols=63 Identities=24% Similarity=0.273 Sum_probs=31.1
Q ss_pred hHHHHHHHcC--CCccCCCeEEEecCCcCcHHHHHHHHHHcCC------------------CcCCCCCCCchhhHHHHHH
Q psy5547 3 PVEKSLRDAK--MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG------------------KELNKSINPDEAVAYGAAV 62 (714)
Q Consensus 3 ~i~~~l~~a~--l~~~dId~V~LvGGssriP~vq~~l~~~f~~------------------~~i~~~~n~deaVA~GAA~ 62 (714)
.|.++|.++. +..+-++.|+|+||+|++|.+.+.|.+.+.. .++....++..++.+||++
T Consensus 281 ~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsi 360 (394)
T 1k8k_B 281 LLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAV 360 (394)
T ss_dssp HHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC------------------
T ss_pred HHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHH
Confidence 4677777764 3344568999999999999988888877632 1122245677999999999
Q ss_pred HHH
Q psy5547 63 QAA 65 (714)
Q Consensus 63 ~aa 65 (714)
+|.
T Consensus 361 las 363 (394)
T 1k8k_B 361 LAD 363 (394)
T ss_dssp ---
T ss_pred hhC
Confidence 886
No 101
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=92.68 E-value=0.13 Score=56.63 Aligned_cols=59 Identities=19% Similarity=0.322 Sum_probs=46.8
Q ss_pred HHHHH-cCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 6 KSLRD-AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 6 ~~l~~-a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
+.|++ .|. .++.|.++||.+|-|.+.+++.+.| +.++.. ..+.|+.|+|||+.|+.-.+
T Consensus 394 ~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~-~~~~e~~alGaA~lA~~a~G 453 (506)
T 3h3n_X 394 DTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQR-AANLETTALGAAYLAGLAVG 453 (506)
T ss_dssp HHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEE-CSSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHh-CCeEEe-cCCCcchhHHHHHHHHHHhC
Confidence 34444 454 4789999999999999999999999 466643 46788999999999987543
No 102
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=92.65 E-value=0.1 Score=57.57 Aligned_cols=51 Identities=20% Similarity=0.136 Sum_probs=42.2
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
.++.|.++||.+|-|.+.+++.+.| +.++.. ..+.|+.|+|||+.|+.-.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~-~~~~e~~alGAA~lA~~a~G 475 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDR-PVILETTALGVAWLAGSRAG 475 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEE-ESCCCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEe-cCCCccHHHHHHHHHHHHcC
Confidence 5889999999999999999999999 466643 45788999999999987544
No 103
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=92.49 E-value=0.15 Score=55.98 Aligned_cols=51 Identities=24% Similarity=0.309 Sum_probs=43.0
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
.++.|.++||.+|-|.+.+++.+.+ +.++.. ....|+.|+|||+.|+.-.+
T Consensus 393 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~-~~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 393 QIKELRVDGGATANDFLMQFQADIL-NRKVIR-PVVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEE-ESCSCHHHHHHHHHHHHHTT
T ss_pred CcceEEEeCccccCHHHHHHHHhhc-CCeEEE-cCCCcchHHHHHHHHHHHhC
Confidence 6889999999999999999999999 466643 45667999999999986543
No 104
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=91.80 E-value=0.19 Score=54.74 Aligned_cols=71 Identities=10% Similarity=0.022 Sum_probs=53.5
Q ss_pred HHHHHHHHhh--hhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHH-cCCCcccCCCCCchhhHhhHHHHHHH
Q psy5547 517 EELNADLFRG--TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDF-FNGKELNKSINPDEAVAYGAAVQAAI 593 (714)
Q Consensus 517 ~~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~-f~~~~v~~~~~p~~ava~GAa~~a~~ 593 (714)
..+...+++. +.-.++..++.... .+.|.++||+++++.+.+.+.+. | +.+|..+. ..++.+.|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 4555566663 55555666665432 26899999999999999999999 9 88887774 455789999999864
No 105
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=91.63 E-value=0.65 Score=47.35 Aligned_cols=121 Identities=18% Similarity=0.196 Sum_probs=65.9
Q ss_pred CCccchhhhHHHHHHHHHHHHHhCCCCCeEE-EeeCCC-CCHHHHHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccC
Q psy5547 322 GPTIEEVSSMVLTKMKETAEAYLGKTVSNAV-ITVPAY-FNDSQRQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVG 399 (714)
Q Consensus 322 ~~s~eev~a~~L~~l~~~~~~~~~~~~~~~v-itVPa~-~~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~ 399 (714)
+.-.++-+...+..|+...+..-...+.++. ++.-|. --.+....+.++-...|++.-.+-.|-+|...+.+......
T Consensus 48 g~ls~eai~r~~~~L~~f~~~~~~~~v~~v~~vATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~ 127 (315)
T 3mdq_A 48 GFITEEAMDRALDTLKKFRVILDEHAVVHVIATGTSAVRSGSNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVP 127 (315)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECHHHHHCTTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSC
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCC
Confidence 3444555566666666555543333444432 221111 01233455556666689977544455555544444433221
Q ss_pred CCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHH
Q psy5547 400 SAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 451 (714)
Q Consensus 400 ~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l 451 (714)
. .....+|+|+|||+|.+++++- +.+.. ..+.++|...+.+.+
T Consensus 128 ~----~~~~~lviDIGGGStEl~~~~~--~~~~~---~~Sl~lG~vrl~e~f 170 (315)
T 3mdq_A 128 M----EDHISLAMDIGGGSVEFIIGNK--NEILW---KQSFEIGGQRLIDRF 170 (315)
T ss_dssp C----TTCCEEEEEECSSCEEEEEECS--SCEEE---EEEESCCHHHHHHHS
T ss_pred C----CCCCEEEEEeCCCceEEEEEEC--CeEee---eEEEechhhHHHHHh
Confidence 1 2356899999999999999862 22221 112578888777654
No 106
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=91.42 E-value=0.14 Score=56.35 Aligned_cols=51 Identities=24% Similarity=0.391 Sum_probs=43.0
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
.++.|.++||.+|-|.+.+++.+.+ +.++.. ..+.|+.|+|||+.|+.-.+
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~-~~~~e~~alGaA~lA~~a~G 451 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDIL-GTRVER-PEVREVTALGAAYLAGLAVG 451 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEE-ESCCCHHHHHHHHHHHHHHT
T ss_pred CccEEEEeCchhcCHHHHHHHHHHh-CCceEe-cCCCCcHHHHHHHHHHHHhC
Confidence 4788999999999999999999999 466643 45788999999999987544
No 107
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=91.18 E-value=0.16 Score=55.77 Aligned_cols=51 Identities=24% Similarity=0.336 Sum_probs=42.8
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
.++.|.++||.+|-|.+.+++.+.| +.++.. ..+.|+.|+|||+.|+.-.+
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~-~~~~e~~alGaA~lA~~~~G 453 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQL-GVDVVR-PKVAETTALGAAYAAGIAVG 453 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEE-ESCSCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCCcccCHHHHHHHHHHh-CCeEEe-CCCCcchHHHHHHHHHhhcC
Confidence 3688999999999999999999999 466643 45678999999999987543
No 108
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=90.96 E-value=0.17 Score=55.50 Aligned_cols=51 Identities=24% Similarity=0.298 Sum_probs=42.6
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
.++.|.++||.+|-|.+.+++.+.+ +.++.. ..+.|+.|+|||+.|+.-.+
T Consensus 398 ~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~-~~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 398 RLKVLKADGGMAQNRLFLKIQADLL-GVPVAV-PEVTETTALGAALMAGVGAG 448 (495)
T ss_dssp CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEE-ESCSCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEecccccCHHHHHHHHHHh-CCeeEe-cCCcccHHHHHHHHHHhhcC
Confidence 4678999999999999999999999 466643 45678999999999976543
No 109
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=90.75 E-value=3 Score=42.41 Aligned_cols=49 Identities=20% Similarity=0.217 Sum_probs=34.2
Q ss_pred ccceEEEEcCCCCc-HHHHHHHHHHc---------CCCcccCCCCCchhhHhhHHHHHH
Q psy5547 544 QIHDIVLVGGSTRI-PKVQKLLQDFF---------NGKELNKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 544 ~i~~ViLvGG~s~~-p~l~~~l~~~f---------~~~~v~~~~~p~~ava~GAa~~a~ 592 (714)
+++.|+|.||.++. +++.+.|++.+ ...++......+.+.++|||.++.
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 35789999999886 66666666554 123455555667889999998763
No 110
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=90.39 E-value=0.2 Score=54.93 Aligned_cols=50 Identities=22% Similarity=0.264 Sum_probs=42.1
Q ss_pred C-CeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHHHhC
Q psy5547 18 I-HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 69 (714)
Q Consensus 18 I-d~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~l~~ 69 (714)
+ +.|.++||.+|-|.+.+++.+.+ +.++.. ....|+.|+|||+.|+.-.+
T Consensus 407 ~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~-~~~~e~~alGaA~la~~~~G 457 (503)
T 2w40_A 407 MLHVLRCDGGMTKNKPFMQFNSDII-NTKIEV-SKYKEVTSLGAAVLAGLEVK 457 (503)
T ss_dssp CCSCEEEESGGGGCHHHHHHHHHHH-TSCEEE-ESCSCHHHHHHHHHHHHHTT
T ss_pred ccceEEEeCccccCHHHHHHHHHHH-CCeEEe-cCCCcchHHHHHHHHHHHhC
Confidence 6 78999999999999999999999 466643 45678999999999987543
No 111
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=90.18 E-value=8.4 Score=42.31 Aligned_cols=217 Identities=13% Similarity=0.128 Sum_probs=106.9
Q ss_pred CCccchhhhHHHHHHHHHHHHHhCC----CCCeEEEee-CCCCCHHHHHHH--HHHHHHcCCCeeEeeechhHHHHHhhc
Q psy5547 322 GPTIEEVSSMVLTKMKETAEAYLGK----TVSNAVITV-PAYFNDSQRQAT--KDSGTIAGLNVLRIINEPTAAAIAYGL 394 (714)
Q Consensus 322 ~~s~eev~a~~L~~l~~~~~~~~~~----~~~~~vitV-Pa~~~~~~r~~l--~~A~~~AGl~~~~li~Ep~AAa~~~~~ 394 (714)
|.-|+.-+..-.+.|...++..+.. .++.+++|. |..|+....-.. +..+...|++.+. |+.-.|=+++...
T Consensus 43 g~~p~~a~~~h~~~l~~~i~~~l~~~~~~~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~ 121 (540)
T 3en9_A 43 GINPREAADHHAETFPKLIKEAFEVVDKNEIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKL 121 (540)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHHHSCGGGCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHhCCHhHCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHH
Confidence 5667766666555555444443332 566776766 776664322111 1223344666544 5555554443333
Q ss_pred ccccCCCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHHhhccCccccHHHH
Q psy5547 395 DKKVGSAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRAL 474 (714)
Q Consensus 395 ~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~ 474 (714)
..... .. +++-+.||++.+-.+ .++.++++...-+. --|+-||.. ... .+......+
T Consensus 122 ~~~~~-----~p---~~l~vsGg~t~~~~~--~~~~~~~lg~t~d~-s~G~~~D~~-a~~--------lgl~~~gg~--- 178 (540)
T 3en9_A 122 TTEAE-----DP---LTLYVSGGNTQVIAY--VSKKYRVFGETLDI-AVGNCLDQF-ARY--------VNLPHPGGP--- 178 (540)
T ss_dssp HSSCS-----SC---EEEEECSSCEEEEEE--ETTEEEEEEEBSSS-CHHHHHHHH-HHH--------TTCCSSCHH---
T ss_pred hcCCC-----CC---cEEEEcCCCcEEEEE--eCCceEEEeeccch-HhHHHHHHH-HHH--------cCCCCCCHH---
Confidence 32211 12 566667788876544 46788888766543 457777743 222 222222211
Q ss_pred HHHHHHHHHHhHhcCCCCeeEEEEecccCCceeEEE-------------ecHHHHHHHHH-HHHhhhhhHHHHHHHHcCC
Q psy5547 475 RRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTS-------------VTRARFEELNA-DLFRGTMEPVEKSLRDAKM 540 (714)
Q Consensus 475 ~~l~~~~e~~K~~ls~~~~~~i~i~~~~~~~~~~~~-------------itr~~~~~~~~-~~~~~i~~~i~~~l~~~~~ 540 (714)
.+...|...... +.++....+.++++. .+..++...++ .+++.+.+.+.++++..+
T Consensus 179 -~ie~lA~~g~~~--------~~~p~~~~~~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~- 248 (540)
T 3en9_A 179 -YIEELARKGKKL--------VDLPYTVKGMDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN- 248 (540)
T ss_dssp -HHHHHHHTCCCC--------CCCCCCEETTEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred -HHHHHHHcCCcc--------CcCCCCCCCcceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 222233222100 111111112222110 01122222121 233333444555555443
Q ss_pred CccccceEEEEcCCCCcHHHHHHHHHHcC--CCcccCC
Q psy5547 541 DKAQIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKS 576 (714)
Q Consensus 541 ~~~~i~~ViLvGG~s~~p~l~~~l~~~f~--~~~v~~~ 576 (714)
++.|+|+||.+...++++++.+.+. +.++..+
T Consensus 249 ----~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p 282 (540)
T 3en9_A 249 ----KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVP 282 (540)
T ss_dssp ----CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECC
T ss_pred ----CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeC
Confidence 5789999999999999999999873 3444444
No 112
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=89.62 E-value=0.81 Score=47.22 Aligned_cols=124 Identities=16% Similarity=0.209 Sum_probs=67.2
Q ss_pred CCccchhhhHHHHHHHHHHHHHhCCCCCeEE-EeeCCCC-CHHHHHHHHHHHHHcCCCeeEeeechhHHHHHh-hccccc
Q psy5547 322 GPTIEEVSSMVLTKMKETAEAYLGKTVSNAV-ITVPAYF-NDSQRQATKDSGTIAGLNVLRIINEPTAAAIAY-GLDKKV 398 (714)
Q Consensus 322 ~~s~eev~a~~L~~l~~~~~~~~~~~~~~~v-itVPa~~-~~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~-~~~~~~ 398 (714)
+.-.++-+...+..|....+..-...+.++. ++.-|.= -.+....+.++-...|++. .+|+-.+=|.+.| +.....
T Consensus 61 g~ls~eai~r~~~aL~~f~~~~~~~~v~~v~~vATsA~R~A~N~~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~ 139 (343)
T 3cer_A 61 HRFADEALERAYVAAREFAGVIAEHPIDGLRFVATSATRDAENREEFEDEIERILGVRP-EVIPGTEEADLSFLGATSVV 139 (343)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHTTSCCSEEEEEECHHHHHCTTHHHHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSC
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecHHHHcCcCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhC
Confidence 3444566677777777666654444444432 2111110 1133445555556679976 5565555445544 332222
Q ss_pred CCCCCCCCcEEEEEEeCCceEEEEEEEE--eC--CEEEEEEecCCCCccHHHHHHHH
Q psy5547 399 GSAAGSGERNVLIFDLGGGTFDVSILTI--ED--GIFEVKSTAGDTHLGGEDFDNRM 451 (714)
Q Consensus 399 ~~~~~~~~~~vlVvD~GggT~Dvsv~~~--~~--~~~~v~~~~g~~~lGG~~id~~l 451 (714)
.. .......+|+|+|||+|+++++.- .. +.+. .....++|+..+.+.+
T Consensus 140 ~~--~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~---~~~SlplG~v~lt~~~ 191 (343)
T 3cer_A 140 NR--DDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQ---GAFSMNIGSVRMTERH 191 (343)
T ss_dssp CT--TTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCS---EEEEESCCHHHHHHHT
T ss_pred cc--ccccCCEEEEEeCCCceEEEEeecCccCcccccc---eeEEEehhHHHHHHHh
Confidence 11 012346899999999999999754 21 1010 1123579999888765
No 113
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=89.44 E-value=0.34 Score=52.34 Aligned_cols=61 Identities=25% Similarity=0.310 Sum_probs=47.2
Q ss_pred HHHHHHcCC-----CccCCCeEEEecCCcCcHHHHHHHHHHcCC-C-----cC-CCCCCCchhhHHHHHHHHH
Q psy5547 5 EKSLRDAKM-----DKAQIHDIVLVGGSTRIPKVQKLLQDFFNG-K-----EL-NKSINPDEAVAYGAAVQAA 65 (714)
Q Consensus 5 ~~~l~~a~l-----~~~dId~V~LvGGssriP~vq~~l~~~f~~-~-----~i-~~~~n~deaVA~GAA~~aa 65 (714)
.++|+.+|. +..||..|+|+||++.+|-+.++.++.|+. . +. ...-+|.-|+|.|-.+|.+
T Consensus 533 ~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 533 TNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp HHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred HHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCccccCCchHHHHHHHHHhhh
Confidence 445777665 356889999999999999999999999964 1 11 1245899999999987653
No 114
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=89.35 E-value=0.23 Score=49.82 Aligned_cols=49 Identities=20% Similarity=0.200 Sum_probs=41.4
Q ss_pred cCCCeEEEecC-CcCcHHHHHHHHHHc--CCCcCCCCCCCchhhHHHHHHHH
Q psy5547 16 AQIHDIVLVGG-STRIPKVQKLLQDFF--NGKELNKSINPDEAVAYGAAVQA 64 (714)
Q Consensus 16 ~dId~V~LvGG-ssriP~vq~~l~~~f--~~~~i~~~~n~deaVA~GAA~~a 64 (714)
..|+.|+++|| -+..|.+++.|++++ .+.++...-||.-+.|+|||+++
T Consensus 235 ~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 235 FKTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp TTCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred CCCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 34667999999 899999999999984 45677777899999999999864
No 115
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=88.66 E-value=0.33 Score=52.28 Aligned_cols=60 Identities=32% Similarity=0.352 Sum_probs=46.2
Q ss_pred HHHHHcCC-----CccCCCeEEEecCCcCcHHHHHHHHHHcCCCcC-------CCCCCCchhhHHHHHHHHH
Q psy5547 6 KSLRDAKM-----DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKEL-------NKSINPDEAVAYGAAVQAA 65 (714)
Q Consensus 6 ~~l~~a~l-----~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i-------~~~~n~deaVA~GAA~~aa 65 (714)
++|+.+|. +..||..|+|+||++.+|-+.++.++.|+.-.+ ...-+|.-|+|.|-.+|.+
T Consensus 532 n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 532 NALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp HHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred HHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 34655433 467899999999999999999999999964111 1245899999999888764
No 116
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=87.95 E-value=25 Score=35.68 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=37.5
Q ss_pred ccceEEEEcCCCCcHHHHHHHHHHcC--CCcccCCC---CCchhhHhhHHHHHHHHh
Q psy5547 544 QIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKSI---NPDEAVAYGAAVQAAILH 595 (714)
Q Consensus 544 ~i~~ViLvGG~s~~p~l~~~l~~~f~--~~~v~~~~---~p~~ava~GAa~~a~~l~ 595 (714)
.++.|+|+||.+...++++.|.+.+. +.++..+. -.|.+++.|++.+.....
T Consensus 244 ~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 300 (330)
T 2ivn_A 244 EKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKA 300 (330)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHT
T ss_pred CCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhc
Confidence 35789999999999999999998872 34554443 234577888876654433
No 117
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=87.83 E-value=0.43 Score=52.10 Aligned_cols=55 Identities=18% Similarity=0.219 Sum_probs=42.0
Q ss_pred HHHHH-cCCCccCCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHH
Q psy5547 6 KSLRD-AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 66 (714)
Q Consensus 6 ~~l~~-a~l~~~dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~ 66 (714)
++|++ .|. .++.|.++||.+|-|.+.+++.+.| +.++... . .|+.|+|||+.|..
T Consensus 384 ~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~-~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 384 HELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAG-P-VEASTLGNIGIQLM 439 (489)
T ss_dssp HHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-C-TTHHHHHHHHHHHH
T ss_pred HHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecC-C-ccHhHHHHHHHHHH
Confidence 34444 454 3688999999999999999999999 4666433 3 69999999666544
No 118
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=87.65 E-value=26 Score=35.48 Aligned_cols=48 Identities=19% Similarity=0.188 Sum_probs=33.1
Q ss_pred ccceEEEEcCCCCcHHHHHHHHHHcCC--------CcccCCCCCchhhHhhHHHHH
Q psy5547 544 QIHDIVLVGGSTRIPKVQKLLQDFFNG--------KELNKSINPDEAVAYGAAVQA 591 (714)
Q Consensus 544 ~i~~ViLvGG~s~~p~l~~~l~~~f~~--------~~v~~~~~p~~ava~GAa~~a 591 (714)
+++.|+|-||.+..+.+.+.|++.+.. .++....-.+.+.++|||.++
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 357899999999888888888877622 123333344678888988654
No 119
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=87.47 E-value=2 Score=47.01 Aligned_cols=119 Identities=16% Similarity=0.188 Sum_probs=67.4
Q ss_pred CCccchhhhHHHHHHHHHHHHHhCCCCCeEE-EeeCCCCC-HHHHHHHHHHHHHcCCCeeEeeechhHHHHHh-hccccc
Q psy5547 322 GPTIEEVSSMVLTKMKETAEAYLGKTVSNAV-ITVPAYFN-DSQRQATKDSGTIAGLNVLRIINEPTAAAIAY-GLDKKV 398 (714)
Q Consensus 322 ~~s~eev~a~~L~~l~~~~~~~~~~~~~~~v-itVPa~~~-~~~r~~l~~A~~~AGl~~~~li~Ep~AAa~~~-~~~~~~ 398 (714)
+.-.++-+...+..|....+..-...+.++. ++.-|.=. .+....+.++-...|++. .+++-.+=|.+.| +.....
T Consensus 55 g~Ls~eai~r~~~~L~~f~~~~~~~~v~~v~~vATsA~R~A~N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~ 133 (513)
T 1u6z_A 55 NMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQ 133 (513)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHTTTCCGGGEEEEECHHHHHCTTHHHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHS
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecHHHHcCcCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhc
Confidence 4555677777777777777655444444432 22111100 123344444445569876 4555554444444 433322
Q ss_pred CCCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHH
Q psy5547 399 GSAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 451 (714)
Q Consensus 399 ~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~l 451 (714)
. .....+|+|+|||+|.+++.+ ++.... ....++|...+.+.+
T Consensus 134 ~-----~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 134 P-----EKGRKLVIDIGGGSTELVIGE--NFEPIL---VESRRMGCVSFAQLY 176 (513)
T ss_dssp C-----CCSCEEEEEECSSCEEEEEEE--TTEEEE---EEEESCCHHHHHHHH
T ss_pred c-----CCCCEEEEEECCCcEEEEEEe--CCeeeE---EEEEeccHHHHHHHH
Confidence 1 112689999999999999874 443322 122678988887765
No 120
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=86.65 E-value=22 Score=35.76 Aligned_cols=88 Identities=22% Similarity=0.303 Sum_probs=50.6
Q ss_pred ccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHH----------------HHHHHHHHHHHcCCCeeEeeechhH
Q psy5547 324 TIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDS----------------QRQATKDSGTIAGLNVLRIINEPTA 387 (714)
Q Consensus 324 s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~----------------~r~~l~~A~~~AGl~~~~li~Ep~A 387 (714)
+++++...+.+.+.+.... .++..+.|++|...+.. -++.+.+. .|++ +.+.++..|
T Consensus 36 ~~~~~~~~i~~~i~~~~~~---~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~---~~~p-v~v~NDa~a 108 (321)
T 3vgl_A 36 TAEGIVDAICAAVAGASEG---HDVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQR---VGLP-VVVENDANA 108 (321)
T ss_dssp SHHHHHHHHHHHHHHHHTT---CCEEEEEEEESSEECTTSSCEEECSSSCCEEECHHHHHHHH---HCSC-EEEEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHhh---cCceEEEEeccccEeCCCCEEEeCCCCCCcCCCHHHHHhhh---hCCC-EEEEehhhh
Confidence 4555555544444443321 25666778887654321 13334333 3775 689999999
Q ss_pred HHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEE
Q psy5547 388 AAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSIL 424 (714)
Q Consensus 388 Aa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~ 424 (714)
+|++-...... ...+.++++-+|.| +-.+++
T Consensus 109 aal~E~~~g~~-----~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 109 AAWGEYRFGAG-----QGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HHHHHHHHSTT-----TTCSSEEEEEESSS-EEEEEE
T ss_pred HHHHHHHhCCC-----CCCCCEEEEEeCcc-eEEEEE
Confidence 99875332111 13466888889988 555554
No 121
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=85.86 E-value=0.45 Score=51.73 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=39.6
Q ss_pred CeEEEecCCcCcHHHHHHHHHH-cCCCcCCCCCCCchhhHHHHHHHHHH
Q psy5547 19 HDIVLVGGSTRIPKVQKLLQDF-FNGKELNKSINPDEAVAYGAAVQAAI 66 (714)
Q Consensus 19 d~V~LvGGssriP~vq~~l~~~-f~~~~i~~~~n~deaVA~GAA~~aa~ 66 (714)
+.|.+.||.+|-|...+++.+. | +.++.+ ....|+.|+|||+.|+.
T Consensus 389 ~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~-~~~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 389 GRILVEGRFAEADVFVRALASLRP-DCAVYT-ANAHNDVSFGALRLIDP 435 (482)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHST-TSEEEE-ESSCCCTTGGGHHHHCT
T ss_pred CeEEEeCCcccCHHHHHHHhhhcC-CCeEEE-cCCCchHHHHHHHHhCc
Confidence 7899999999999999999999 9 566643 35678999999999964
No 122
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=84.20 E-value=2.6 Score=45.99 Aligned_cols=116 Identities=16% Similarity=0.199 Sum_probs=62.7
Q ss_pred CccchhhhHHHHHHHHHHHHHhCCCCCeEE-EeeCCCC-CHHHHHHHHHHHHHcCCCeeEeeec-hhHHHHHhhcccccC
Q psy5547 323 PTIEEVSSMVLTKMKETAEAYLGKTVSNAV-ITVPAYF-NDSQRQATKDSGTIAGLNVLRIINE-PTAAAIAYGLDKKVG 399 (714)
Q Consensus 323 ~s~eev~a~~L~~l~~~~~~~~~~~~~~~v-itVPa~~-~~~~r~~l~~A~~~AGl~~~~li~E-p~AAa~~~~~~~~~~ 399 (714)
.-.++-+...+..|....+..-...+.++. ++.-|.= -.+....+.++-...|++. .+++- -+|...+.+......
T Consensus 60 ~Ls~eai~r~~~~L~~F~~~~~~~~v~~v~~vATsA~R~A~N~~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~ 138 (508)
T 3hi0_A 60 RMHEEGVTRALMALRRFHVLSEQAQAQKLYVLATAAAREAENGPDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFY 138 (508)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTHHHHSTTHHHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSS
T ss_pred CcCHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeHHHHcCcCHHHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCC
Confidence 344455566666666655443333444432 2211111 1233455555666679976 45554 444444444433321
Q ss_pred CCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHH
Q psy5547 400 SAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNR 450 (714)
Q Consensus 400 ~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~ 450 (714)
....+|+|+|||+|.+++.+ ++.+. ...+.++|.-.+.+.
T Consensus 139 ------~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~lG~vrl~e~ 178 (508)
T 3hi0_A 139 ------QPDGIAGDLGGGSLELIDIK--DKSCG---EGITLPLGGLRLSEQ 178 (508)
T ss_dssp ------SCEEEEEEECSSCEEEEEEE--TTEEC---CCEEESCCHHHHHHH
T ss_pred ------CCCeEEEEeCCCceEEEEee--CCeee---eEEEecceEEehhhc
Confidence 22349999999999999986 33321 122357888888763
No 123
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=83.75 E-value=2.3 Score=43.82 Aligned_cols=71 Identities=20% Similarity=0.236 Sum_probs=45.9
Q ss_pred HHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccCC----CCCchhhHhhHHHHHHHH
Q psy5547 521 ADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS----INPDEAVAYGAAVQAAIL 594 (714)
Q Consensus 521 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~----~~p~~ava~GAa~~a~~l 594 (714)
.-+.+-+...|.+.++... ..++.|+++||+++.|+|.++|++.+++.++... .+|+.-=|..-|++|..-
T Consensus 263 ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~ 337 (371)
T 3qbx_A 263 ATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHRF 337 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHHH
Confidence 3333334445555554432 2357899999999999999999999976655332 345544455567776644
No 124
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=80.45 E-value=34 Score=35.74 Aligned_cols=92 Identities=13% Similarity=0.166 Sum_probs=51.0
Q ss_pred CccchhhhHHHHHHHHHHHHHh--CCCCCeEEEeeCC----------------CCCHH-HHHHHHHHHHHcCCCeeEeee
Q psy5547 323 PTIEEVSSMVLTKMKETAEAYL--GKTVSNAVITVPA----------------YFNDS-QRQATKDSGTIAGLNVLRIIN 383 (714)
Q Consensus 323 ~s~eev~a~~L~~l~~~~~~~~--~~~~~~~vitVPa----------------~~~~~-~r~~l~~A~~~AGl~~~~li~ 383 (714)
.++++++..+...+.+.....- ...+..+.|++|. .|... -++.+.+. .|++ +.+.+
T Consensus 119 ~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~---~~~p-v~v~N 194 (406)
T 1z6r_A 119 KDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQH---TGVP-VYIQH 194 (406)
T ss_dssp SCSSCHHHHHHHHHHHHHHHTGGGCCCEEEEEEEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHH---HSSC-EEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcCceeEEEEEeecCEeCCCCEEecCCCCCCccCCCHHHHHHHH---HCCC-EEEec
Confidence 3566666666665555544321 1234445555553 35532 23344433 3675 67899
Q ss_pred chhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEE
Q psy5547 384 EPTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSIL 424 (714)
Q Consensus 384 Ep~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~ 424 (714)
+..|||++-...... ...+.++++-+|.| +-.+++
T Consensus 195 Da~aaalaE~~~g~~-----~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 195 DISAWTMAEALFGAS-----RGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HHHHHHHHHHHHSTT-----TTCSSEEEEEESSS-EEEEEE
T ss_pred hhHHHHHHHHHhcCC-----CCCCcEEEEEECCc-EEEEEE
Confidence 999999875332110 13456788888887 445554
No 125
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=80.00 E-value=4 Score=41.79 Aligned_cols=69 Identities=16% Similarity=0.223 Sum_probs=47.0
Q ss_pred HhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcC--CCcccCCCC---CchhhHhhHHHHHHHHhCC
Q psy5547 524 FRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKSIN---PDEAVAYGAAVQAAILHGD 597 (714)
Q Consensus 524 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~--~~~v~~~~~---p~~ava~GAa~~a~~l~~~ 597 (714)
.+.+.+.+.++++..+ ++.|+|+||.+...++++.|.+.+. +.++..+.. .|.+++.|+|.+-....|.
T Consensus 234 ~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g~ 307 (334)
T 3eno_A 234 FAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSGV 307 (334)
T ss_dssp HHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcCC
Confidence 3444445555554443 5789999999999999999998873 445544432 4678888888766555543
No 126
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=77.02 E-value=5.3 Score=45.74 Aligned_cols=53 Identities=21% Similarity=0.435 Sum_probs=40.7
Q ss_pred ccceEEEEcCCCCcHHHHHHHHHHcC--CCcccCCCC---CchhhHhhHHHHHHH-HhC
Q psy5547 544 QIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKSIN---PDEAVAYGAAVQAAI-LHG 596 (714)
Q Consensus 544 ~i~~ViLvGG~s~~p~l~~~l~~~f~--~~~v~~~~~---p~~ava~GAa~~a~~-l~~ 596 (714)
.++.|+|.||.+...++++.|.+.+. +.++..+.. .|..+|.|+|++|+. |.+
T Consensus 705 g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L~~ 763 (772)
T 4g9i_A 705 GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYLEG 763 (772)
T ss_dssp TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHHHT
T ss_pred CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHHhc
Confidence 36789999999999999999999873 345544432 378899999988765 444
No 127
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=76.90 E-value=6.1 Score=40.65 Aligned_cols=73 Identities=15% Similarity=0.246 Sum_probs=46.5
Q ss_pred HHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccC----CCCCchhhHhhHHHHHHH
Q psy5547 518 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK----SINPDEAVAYGAAVQAAI 593 (714)
Q Consensus 518 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~----~~~p~~ava~GAa~~a~~ 593 (714)
++..-+.+-+...|.+.++... .++.|+++||+++.|+|.++|++.+++.+|.. ..+|+.-=|..-|++|..
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 3444444445555556665442 35689999999999999999999997755432 234444334445666654
Q ss_pred H
Q psy5547 594 L 594 (714)
Q Consensus 594 l 594 (714)
-
T Consensus 343 ~ 343 (370)
T 3cqy_A 343 Y 343 (370)
T ss_dssp H
T ss_pred H
Confidence 3
No 128
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=76.75 E-value=1.9 Score=44.48 Aligned_cols=48 Identities=21% Similarity=0.056 Sum_probs=40.4
Q ss_pred CCCeEEEecC-CcCcHHHHHHHHHHc-----CCCcCCCCCCCchhhHHHHHHHH
Q psy5547 17 QIHDIVLVGG-STRIPKVQKLLQDFF-----NGKELNKSINPDEAVAYGAAVQA 64 (714)
Q Consensus 17 dId~V~LvGG-ssriP~vq~~l~~~f-----~~~~i~~~~n~deaVA~GAA~~a 64 (714)
.++.|+++|| -+.-|.+++.|++.+ ++.++...-++.-+-|+|||+.+
T Consensus 305 ~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 305 NIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp TCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 4567999999 999999999999986 24566667789999999999975
No 129
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=75.05 E-value=74 Score=32.10 Aligned_cols=69 Identities=1% Similarity=-0.087 Sum_probs=45.8
Q ss_pred ccchhhhHHHHHHHHHHHHHh--CC-CCCeEEEeeCCCCCHHHHHHHHHHHHHc-C--CCeeEeeechhHHHHHh
Q psy5547 324 TIEEVSSMVLTKMKETAEAYL--GK-TVSNAVITVPAYFNDSQRQATKDSGTIA-G--LNVLRIINEPTAAAIAY 392 (714)
Q Consensus 324 s~eev~a~~L~~l~~~~~~~~--~~-~~~~~vitVPa~~~~~~r~~l~~A~~~A-G--l~~~~li~Ep~AAa~~~ 392 (714)
+++++...+...+.+...+.- .. ++..+.|++|...+......+.+..+.. | .-.+.+.++..|||+++
T Consensus 44 ~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~ 118 (347)
T 2ch5_A 44 GTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA 118 (347)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh
Confidence 456666666655555544321 12 4678999999998876666666666554 3 13578899999999873
No 130
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=74.84 E-value=68 Score=31.59 Aligned_cols=50 Identities=16% Similarity=0.213 Sum_probs=38.3
Q ss_pred ccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHH
Q psy5547 544 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 594 (714)
Q Consensus 544 ~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l 594 (714)
+++.|+|.||.+..+.+.+.+++.++..++..+. .+.+.+.||+.++...
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYKE 288 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHHh
Confidence 4578999999887788888888888544555555 6678899999887543
No 131
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=74.01 E-value=4.2 Score=41.92 Aligned_cols=48 Identities=15% Similarity=0.285 Sum_probs=27.9
Q ss_pred eeEeeechhHHHHHhh-cccccCCCCCCCCcEEEEEEeCCceEEEEEEE
Q psy5547 378 VLRIINEPTAAAIAYG-LDKKVGSAAGSGERNVLIFDLGGGTFDVSILT 425 (714)
Q Consensus 378 ~~~li~Ep~AAa~~~~-~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~ 425 (714)
.+.+|+-.+=|.+.|. .............++++|+|+|||+|.+++..
T Consensus 110 ~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 110 EAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred eEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 4566665555555442 11111100001235799999999999999873
No 132
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=73.81 E-value=7 Score=43.65 Aligned_cols=50 Identities=22% Similarity=0.255 Sum_probs=39.7
Q ss_pred ccceEEEEcCCCCcHHHHHHHHHHcCCCcccCC---CCCchhhHhhHHHHHHH
Q psy5547 544 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS---INPDEAVAYGAAVQAAI 593 (714)
Q Consensus 544 ~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~---~~p~~ava~GAa~~a~~ 593 (714)
.++.|+|+||.+...+|++.|.+.+.+.++..+ .-.|.+++.|.|++|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 357899999999999999999998854444332 33577999999998864
No 133
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=71.10 E-value=5.3 Score=45.56 Aligned_cols=53 Identities=26% Similarity=0.318 Sum_probs=40.9
Q ss_pred ccceEEEEcCCCCcHHHHHHHHHHc--CCCcccCC-CC--CchhhHhhHHHHHHHHhC
Q psy5547 544 QIHDIVLVGGSTRIPKVQKLLQDFF--NGKELNKS-IN--PDEAVAYGAAVQAAILHG 596 (714)
Q Consensus 544 ~i~~ViLvGG~s~~p~l~~~l~~~f--~~~~v~~~-~~--p~~ava~GAa~~a~~l~~ 596 (714)
.++.|+|+||.+...+|++.|.+.+ .+.++..+ .- .|.++|.|.|++|+...+
T Consensus 693 g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 693 GINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp CCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 3578999999999999999999987 34444332 22 378999999999876544
No 134
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=66.31 E-value=58 Score=33.90 Aligned_cols=41 Identities=10% Similarity=0.311 Sum_probs=29.4
Q ss_pred hhHHHHHHHHcCCCccccceEEEEcCCC-CcHHHHHHHHHHc
Q psy5547 528 MEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFF 568 (714)
Q Consensus 528 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~l~~~l~~~f 568 (714)
...|.+.+...-..-..+|.|+++||-+ +++.+|+.|.+.+
T Consensus 314 ~yri~k~IGa~aa~LggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 314 VHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHTTCSSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECccccccCHHHHHHHHhhH
Confidence 3334444433322235689999999999 9999999999876
No 135
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=64.83 E-value=15 Score=40.31 Aligned_cols=80 Identities=16% Similarity=0.177 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHH-hhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcccC-CCCCchhhHhhHHHH
Q psy5547 513 RARFEELNADLF-RGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK-SINPDEAVAYGAAVQ 590 (714)
Q Consensus 513 r~~~~~~~~~~~-~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~-~~~p~~ava~GAa~~ 590 (714)
..++...++..+ +-+.+.+..+.+.. .++.|+|.||.+....+++.|.+..+-..+.. +.-.|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~t-----g~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLART-----GERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 344444444333 33334444444443 36789999999999999999987653223333 234577899999999
Q ss_pred HHHHhCC
Q psy5547 591 AAILHGD 597 (714)
Q Consensus 591 a~~l~~~ 597 (714)
+....|.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9877664
No 136
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=64.56 E-value=65 Score=32.24 Aligned_cols=224 Identities=13% Similarity=0.109 Sum_probs=0.0
Q ss_pred CCCCCccchhhhHHHHHHHHHHHHHhCCCCCeEEEeeCCCCCHHHHHHH-------------HHHHHHcCCCeeEeeech
Q psy5547 319 AGPGPTIEEVSSMVLTKMKETAEAYLGKTVSNAVITVPAYFNDSQRQAT-------------KDSGTIAGLNVLRIINEP 385 (714)
Q Consensus 319 ~~~~~s~eev~a~~L~~l~~~~~~~~~~~~~~~vitVPa~~~~~~r~~l-------------~~A~~~AGl~~~~li~Ep 385 (714)
+.+..+++++...+.+.+.+..... ..+..+.|++|...+......+ ....+..|++ +.+.++.
T Consensus 54 ~~~~~~~~~~~~~i~~~i~~~~~~~--~~i~~igi~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~p-v~v~NDa 130 (327)
T 2ap1_A 54 PTPHTSYSAFLDAVCELVEEADQRF--GVKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRD-VRLDNDA 130 (327)
T ss_dssp ECCCSCHHHHHHHHHHHHHHHHHHH--TSCCEEEEEESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSC-EEEEEHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhc--CCccEEEEEeeeeEECCCCEEEccCCCccCCCChHHHHHHHHCCC-EEEecHH
Q ss_pred hHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHH---------------
Q psy5547 386 TAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNR--------------- 450 (714)
Q Consensus 386 ~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~id~~--------------- 450 (714)
.|||++-....... ..+.++++-+|.| +..--+-++.+-.-.......+|-..++..
T Consensus 131 ~aaalgE~~~g~~~-----~~~~~v~l~~GtG---iG~giv~~G~l~~G~~g~aGE~Gh~~~~~~~~~~~~~~~~g~~c~ 202 (327)
T 2ap1_A 131 NCFALSEAWDDEFT-----QYPLVMGLILGTG---VGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRCG 202 (327)
T ss_dssp HHHHHHHHTSTTGG-----GCSEEEEEEESSS---EEEEEEETTEEECCTTSCTTCGGGSBCCHHHHHHHCTTSCCCBCT
T ss_pred HHHHHHHHHhCcCC-----CCCcEEEEEECCc---EEEEEEECCEEeecCCCcccccccEEEecCcccccccccCCCcCC
Q ss_pred -----------HHHHHHHHHHHhhccCccccHHHHHHHHHHHHHHhHhcCCCCeeEEEEecccCCceeEEEecHHHHHHH
Q psy5547 451 -----------MVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSVTRARFEEL 519 (714)
Q Consensus 451 -----------l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~ 519 (714)
=...+.+.+....... ...+.........-+.+. ++
T Consensus 203 cG~~gcle~~~s~~~l~~~~~~~~~~~-~~~~~i~~~a~~gd~~a~--------------------------------~i 249 (327)
T 2ap1_A 203 CGQMGCIENYLSGRGFAWLYQHYYDQS-LQAPEIIALWEQGDEQAH--------------------------------AH 249 (327)
T ss_dssp TSCBSBTHHHHSHHHHHHHHHHHHCCC-CCHHHHHHHHHTTCHHHH--------------------------------HH
T ss_pred CCchhhHHHHhCHHHHHHHHHHhcCCC-CCHHHHHHHHHcCCHHHH--------------------------------HH
Q ss_pred HHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcC--------CCcccCCCCCchhhHhhHHHHH
Q psy5547 520 NADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN--------GKELNKSINPDEAVAYGAAVQA 591 (714)
Q Consensus 520 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~--------~~~v~~~~~p~~ava~GAa~~a 591 (714)
++...+.+...+..++...+ ++.|+|.||.+..+.+...+++.+. ..++....-.+.+.+.|||.++
T Consensus 250 l~~~~~~La~~i~~l~~~l~-----p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 250 VERYLDLLAVCLGNILTIVD-----PDLLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-----CSEEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhC-----CCEEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
No 137
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=63.73 E-value=29 Score=36.10 Aligned_cols=44 Identities=7% Similarity=-0.020 Sum_probs=31.2
Q ss_pred HHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCC-CcHHHHHHHHHHc
Q psy5547 521 ADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFF 568 (714)
Q Consensus 521 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~l~~~l~~~f 568 (714)
+-+..++.+.|-...... ..+|.|+++||-+ +++.+|+.+.+.+
T Consensus 303 d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 303 EIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 334444444444443333 4589999999999 9999999999775
No 138
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=61.31 E-value=6.5 Score=39.77 Aligned_cols=72 Identities=13% Similarity=0.071 Sum_probs=38.4
Q ss_pred ecHHHHHHHHHHHHhhhh----hHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHHHHcCCCcc--cC-CCCCchhh
Q psy5547 511 VTRARFEELNADLFRGTM----EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKEL--NK-SINPDEAV 583 (714)
Q Consensus 511 itr~~~~~~~~~~~~~i~----~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v--~~-~~~p~~av 583 (714)
++.++.+++.+.+++.-+ +.+.+++.+.+ +..|+.+||+ ++|...+.+.++-..+ .. +.+..-+-
T Consensus 243 ~~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~-----~~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vap 314 (334)
T 3cet_A 243 ISEIDAENIAKNYYELWKELILENVENVAEKYG-----SKKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATP 314 (334)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHH
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccC
Confidence 355666666655554444 44445554432 3479999977 4666666544211110 01 22344567
Q ss_pred HhhHHHH
Q psy5547 584 AYGAAVQ 590 (714)
Q Consensus 584 a~GAa~~ 590 (714)
|.|+|++
T Consensus 315 A~avA~l 321 (334)
T 3cet_A 315 SFAVAEL 321 (334)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888855
No 139
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=58.90 E-value=26 Score=34.64 Aligned_cols=50 Identities=18% Similarity=0.121 Sum_probs=33.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHHcC-----------CCcccCCCCCchhhHhhHHHHHHHH
Q psy5547 545 IHDIVLVGGSTRIPKVQKLLQDFFN-----------GKELNKSINPDEAVAYGAAVQAAIL 594 (714)
Q Consensus 545 i~~ViLvGG~s~~p~l~~~l~~~f~-----------~~~v~~~~~p~~ava~GAa~~a~~l 594 (714)
++.|+|.||.+..+.+.+.+++.+. ..++....-.+.+.+.||+.++...
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~~ 288 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQE 288 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHHh
Confidence 4789999998877777777666541 1233333445678899999887543
No 140
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=55.79 E-value=32 Score=36.53 Aligned_cols=101 Identities=12% Similarity=0.156 Sum_probs=54.4
Q ss_pred ccchhhhHHHHHHHHHHHHHhCC---CCCeEEEeeCCCCC------HHHHHHHHHHHHHc----CC--CeeEeeechhHH
Q psy5547 324 TIEEVSSMVLTKMKETAEAYLGK---TVSNAVITVPAYFN------DSQRQATKDSGTIA----GL--NVLRIINEPTAA 388 (714)
Q Consensus 324 s~eev~a~~L~~l~~~~~~~~~~---~~~~~vitVPa~~~------~~~r~~l~~A~~~A----Gl--~~~~li~Ep~AA 388 (714)
.|+.+ +..|..|.+.+...+.. ....+.+---|..- ..+++.+.++++.. ++ ..+++|+-.+=+
T Consensus 83 ~p~~~-~~~l~~Ll~~a~~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg 161 (452)
T 3zx3_A 83 KTDEI-AAYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEG 161 (452)
T ss_dssp CGGGH-HHHHHHHHHHHHHHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHH
T ss_pred CHHHH-HHHHHHHHHHHHHhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhh
Confidence 45555 46888888888865432 33444444333331 11334444444332 44 457888876666
Q ss_pred HHHhhcc-cccCCCCCCCCcEEEEEEeCCceEEEEEEE
Q psy5547 389 AIAYGLD-KKVGSAAGSGERNVLIFDLGGGTFDVSILT 425 (714)
Q Consensus 389 a~~~~~~-~~~~~~~~~~~~~vlVvD~GggT~Dvsv~~ 425 (714)
.++|..- ............++.++|+|||++.++...
T Consensus 162 ~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 162 AYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp HHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred hhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 6655221 111100000235678999999999998654
No 141
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=55.73 E-value=7 Score=39.44 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=32.0
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|+..|+++++ -+.+.+.|+
T Consensus 223 ~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 223 IVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 5788999999999999999999999886 346777785
No 142
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=55.43 E-value=25 Score=34.96 Aligned_cols=51 Identities=18% Similarity=0.197 Sum_probs=37.4
Q ss_pred ccceEEEEcCCCCcHHHHHHHHHHcCC-----CcccCCCCCchhhHhhHHHHHHHH
Q psy5547 544 QIHDIVLVGGSTRIPKVQKLLQDFFNG-----KELNKSINPDEAVAYGAAVQAAIL 594 (714)
Q Consensus 544 ~i~~ViLvGG~s~~p~l~~~l~~~f~~-----~~v~~~~~p~~ava~GAa~~a~~l 594 (714)
+++.|+|.||.+..+.+.+.|++.+.. ..+....-.+.+.+.||+.++...
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 357899999999888888888887732 234444456678999999887643
No 143
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=55.13 E-value=8.7 Score=30.36 Aligned_cols=28 Identities=18% Similarity=0.259 Sum_probs=25.7
Q ss_pred EEEeeCCCCCHHHHHHHHHHHHHcCCCe
Q psy5547 351 AVITVPAYFNDSQRQATKDSGTIAGLNV 378 (714)
Q Consensus 351 ~vitVPa~~~~~~r~~l~~A~~~AGl~~ 378 (714)
-.++.|+.++..+|..+.+.|+.-||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 3799999999999999999999999855
No 144
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=53.52 E-value=69 Score=33.22 Aligned_cols=44 Identities=9% Similarity=0.070 Sum_probs=31.4
Q ss_pred HHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCC-CcHHHHHHHHHHc
Q psy5547 521 ADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFF 568 (714)
Q Consensus 521 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~l~~~l~~~f 568 (714)
+-+..++.+.|-...... ..+|.|+++||-+ +++.+|+.+.+.+
T Consensus 303 d~f~yri~k~IGa~~a~L----ggvDaIVFTgGIGEns~~vR~~i~~~l 347 (403)
T 2iir_A 303 EIYDYRIAKYIGAYAAAM----NGVDAIVFTAGVGENSPITREDVCSYL 347 (403)
T ss_dssp HHHHHHHHHHHHHHHHHH----TCCSEEEEEHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHh----CCCCEEEECcccccCCHHHHHHHHhhh
Confidence 334444444444443333 2589999999999 9999999999887
No 145
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=53.12 E-value=56 Score=33.58 Aligned_cols=25 Identities=16% Similarity=0.380 Sum_probs=22.8
Q ss_pred ccceEEEEcCCC-CcHHHHHHHHHHc
Q psy5547 544 QIHDIVLVGGST-RIPKVQKLLQDFF 568 (714)
Q Consensus 544 ~i~~ViLvGG~s-~~p~l~~~l~~~f 568 (714)
.+|.|+++||-+ +.+.+|+.+.+.+
T Consensus 313 gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 313 KLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp SCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred CCCEEEECCccccCcHHHHHHHHhhc
Confidence 699999999988 8899999999876
No 146
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=53.05 E-value=21 Score=38.06 Aligned_cols=20 Identities=25% Similarity=0.448 Sum_probs=17.0
Q ss_pred CcEEEEEEeCCceEEEEEEE
Q psy5547 406 ERNVLIFDLGGGTFDVSILT 425 (714)
Q Consensus 406 ~~~vlVvD~GggT~Dvsv~~ 425 (714)
..+++|+|+|||+|.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 35689999999999999874
No 147
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=52.97 E-value=7.7 Score=38.92 Aligned_cols=37 Identities=16% Similarity=0.219 Sum_probs=31.5
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.|+++++- +.+.+.||
T Consensus 215 ~i~~al~~agl~~~did~~~~H~~~~~~~---~~~~~~lg 251 (309)
T 2ebd_A 215 VCREVLEKAGVKPEEVSLVIPHQANVRII---NALAEKLN 251 (309)
T ss_dssp HHHHHHHHHTCCGGGCSEEEECCSCHHHH---HHHHHHTT
T ss_pred HHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHhC
Confidence 47889999999999999999999998863 45677775
No 148
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=50.62 E-value=37 Score=34.00 Aligned_cols=48 Identities=21% Similarity=0.268 Sum_probs=33.2
Q ss_pred cceEEEEcCCCC-cHHHHHHHHHHcC---------CCcccCCCCCchhhHhhHHHHHH
Q psy5547 545 IHDIVLVGGSTR-IPKVQKLLQDFFN---------GKELNKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 545 i~~ViLvGG~s~-~p~l~~~l~~~f~---------~~~v~~~~~p~~ava~GAa~~a~ 592 (714)
++.|+|.||.+. .+++.+.+++.+. ..++......+.+.+.||+.++.
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 468999999886 5777777776651 12344444556788999998764
No 149
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=49.78 E-value=10 Score=40.36 Aligned_cols=42 Identities=10% Similarity=0.244 Sum_probs=34.7
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCc--HHHHHHHHHHcCCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRI--PKVQKLLQDFFNGK 44 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssri--P~vq~~l~~~f~~~ 44 (714)
.++++|+++|++++|||.|++.|-+|.+ |.=.+.|...|++.
T Consensus 307 ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~fg~~ 350 (434)
T 2gp6_A 307 AITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGN 350 (434)
T ss_dssp HHHHHHHHTTCCTTTEEEEECCCCSCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCHHHcCEEEEeCCcCccchHHHHHHHHHHhccC
Confidence 5789999999999999999999777766 55566788888653
No 150
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=49.75 E-value=8.4 Score=38.95 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=31.5
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|+..|+++++ -+.+.+.|+
T Consensus 225 ~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 261 (322)
T 1ub7_A 225 ATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLG 261 (322)
T ss_dssp HHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTT
T ss_pred HHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 4788999999999999999999999876 345777775
No 151
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=48.75 E-value=2.1e+02 Score=28.16 Aligned_cols=49 Identities=24% Similarity=0.205 Sum_probs=31.7
Q ss_pred ccceEEEEcCCC-Cc-HHHHHHHHHHcCC-------CcccCCCCCchhhHhhHHHHHH
Q psy5547 544 QIHDIVLVGGST-RI-PKVQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 544 ~i~~ViLvGG~s-~~-p~l~~~l~~~f~~-------~~v~~~~~p~~ava~GAa~~a~ 592 (714)
+++.|+|.||.+ .. +++.+.|++.+.. ..+....-.+.+.+.|||.++.
T Consensus 237 ~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 237 DPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 357899988877 54 6666666655411 1233344456789999998775
No 152
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=48.56 E-value=8.2 Score=40.66 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=32.3
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCc--HHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRI--PKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssri--P~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.|.+|++ |.--..|.+.|+
T Consensus 280 ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~g 321 (408)
T 1j3n_A 280 AMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFG 321 (408)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhc
Confidence 5789999999999999999999999986 333455556664
No 153
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=47.23 E-value=27 Score=34.43 Aligned_cols=47 Identities=19% Similarity=0.204 Sum_probs=33.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHHcCCC------cccCCCCCchhhHhhHHHHH
Q psy5547 545 IHDIVLVGGSTRIPKVQKLLQDFFNGK------ELNKSINPDEAVAYGAAVQA 591 (714)
Q Consensus 545 i~~ViLvGG~s~~p~l~~~l~~~f~~~------~v~~~~~p~~ava~GAa~~a 591 (714)
++.|+|.||.+..+.+.+.+++.+... ++......+.+.+.||+.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 467999999887788888888877332 23333445668899999875
No 154
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=45.88 E-value=70 Score=34.21 Aligned_cols=25 Identities=24% Similarity=0.510 Sum_probs=21.9
Q ss_pred CCcEEEEEEeCCceEEEEEEEEeCC
Q psy5547 405 GERNVLIFDLGGGTFDVSILTIEDG 429 (714)
Q Consensus 405 ~~~~vlVvD~GggT~Dvsv~~~~~~ 429 (714)
+...++.+|+||.++-+.++++.+.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESS
T ss_pred cceEEEEEEecCCeEEEEEEEECCC
Confidence 4568999999999999999999764
No 155
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=44.26 E-value=8.4 Score=39.34 Aligned_cols=37 Identities=19% Similarity=0.208 Sum_probs=31.1
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|+..|+++++- +.+.+.|+
T Consensus 236 ~i~~aL~~agl~~~did~v~~H~~~~~~~---d~i~~~lg 272 (339)
T 1mzj_A 236 AAREALEVAGLTVGDLVAFVPHQANLRII---DVLVDRLG 272 (339)
T ss_dssp HHHHHHHTTTCCGGGCSEEEECCSCHHHH---HHHHHHHT
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCCHHHH---HHHHHHhC
Confidence 47899999999999999999999999753 45666674
No 156
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=43.50 E-value=8.9 Score=39.02 Aligned_cols=37 Identities=22% Similarity=0.330 Sum_probs=31.0
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.++++++- +.+.+.|+
T Consensus 229 ~i~~aL~~agl~~~did~~~~H~~~~~~~---d~~~~~lg 265 (331)
T 2x3e_A 229 SVRRVLDRVGWQASDLHHLVPHQANTRIL---AAVADQLD 265 (331)
T ss_dssp HHHHHHHHHTCCGGGCSEEEECCCCHHHH---HHHHHHHT
T ss_pred HHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHcC
Confidence 47889999999999999999999998863 44666664
No 157
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=43.30 E-value=9.8 Score=38.23 Aligned_cols=37 Identities=11% Similarity=0.163 Sum_probs=30.8
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.++++++- +.+.+.||
T Consensus 217 ~i~~al~~agl~~~did~~~~H~~~~~~~---d~~~~~lg 253 (313)
T 1zow_A 217 ASTRVVEKANLTSDDIDLFIPHQANIRIM---ESARERLG 253 (313)
T ss_dssp HHHHHHHHTTCCGGGCSEEEECCSCHHHH---HHHHHHHT
T ss_pred HHHHHHHHcCCCHHHCCEEEEcCCCHHHH---HHHHHHhC
Confidence 47889999999999999999999998754 34666674
No 158
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=43.26 E-value=99 Score=32.22 Aligned_cols=44 Identities=14% Similarity=0.135 Sum_probs=30.1
Q ss_pred hhhhhHHHHHHHHcCCCc-cccceEEEEcCCC-CcHHHHHHHHHHc
Q psy5547 525 RGTMEPVEKSLRDAKMDK-AQIHDIVLVGGST-RIPKVQKLLQDFF 568 (714)
Q Consensus 525 ~~i~~~i~~~l~~~~~~~-~~i~~ViLvGG~s-~~p~l~~~l~~~f 568 (714)
+-....|.+.+...-..- ..+|.|+++||-+ +.+.||+.+-+.+
T Consensus 319 d~f~yri~k~IGa~aa~L~G~vDaIVFTgGIGEns~~vR~~v~~~l 364 (415)
T 3sk3_A 319 DVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELSLGKL 364 (415)
T ss_dssp HHHHHHHHHHHHHGGGGSTTCCCEEEEEHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEECCccccCCHHHHHHHHhhc
Confidence 333444444444433222 3589999999988 7999999999876
No 159
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=43.12 E-value=14 Score=39.25 Aligned_cols=47 Identities=30% Similarity=0.382 Sum_probs=34.3
Q ss_pred CeEEEecCCcCcHHHHHHHHHHcC-------------------C--CcCCCCCCCchhhHHHHHHHHH
Q psy5547 19 HDIVLVGGSTRIPKVQKLLQDFFN-------------------G--KELNKSINPDEAVAYGAAVQAA 65 (714)
Q Consensus 19 d~V~LvGGssriP~vq~~l~~~f~-------------------~--~~i~~~~n~deaVA~GAA~~aa 65 (714)
..|+|+||+|.+|-+.+.|.+-+. . .++....++.-++=+|++++|.
T Consensus 328 ~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 328 KNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred CCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 569999999999998888776441 0 1122334667899999999985
No 160
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=42.87 E-value=13 Score=41.16 Aligned_cols=47 Identities=30% Similarity=0.384 Sum_probs=34.4
Q ss_pred CeEEEecCCcCcHHHHHHHHHHcCC------------CcCC---CCCCCchhhHHHHHHHHH
Q psy5547 19 HDIVLVGGSTRIPKVQKLLQDFFNG------------KELN---KSINPDEAVAYGAAVQAA 65 (714)
Q Consensus 19 d~V~LvGGssriP~vq~~l~~~f~~------------~~i~---~~~n~deaVA~GAA~~aa 65 (714)
..|+|+||+|.+|.+.+.|.+-+.. .++. +..++.-++=+||+++|.
T Consensus 502 ~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilas 563 (593)
T 4fo0_A 502 SSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLAC 563 (593)
T ss_dssp HEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHH
T ss_pred CCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhc
Confidence 6799999999999988887655411 1111 234777889999999985
No 161
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=42.79 E-value=13 Score=39.60 Aligned_cols=40 Identities=18% Similarity=0.318 Sum_probs=33.1
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCc--HHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRI--PKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssri--P~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.|-+|++ |.=-+.|.+.|+
T Consensus 306 ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~fg 347 (437)
T 2gqd_A 306 AMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFG 347 (437)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHHHh
Confidence 5789999999999999999999999986 333456677775
No 162
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=42.72 E-value=15 Score=36.56 Aligned_cols=49 Identities=16% Similarity=0.236 Sum_probs=36.5
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCcCCCCCCCchhhHHHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 66 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~i~~~~n~deaVA~GAA~~aa~ 66 (714)
|.+.|+|.||-+..|.+.+.|.+.+...++..+- .+.+.++|||..+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 5578999999887788888888777433454445 678899999998753
No 163
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=41.60 E-value=14 Score=39.04 Aligned_cols=40 Identities=15% Similarity=0.206 Sum_probs=33.1
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCc--HHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRI--PKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssri--P~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.|-+|++ |.=-+.|.+.|+
T Consensus 286 ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g 327 (416)
T 1e5m_A 286 AIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALG 327 (416)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHHHc
Confidence 5789999999999999999999999985 333456777775
No 164
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=41.59 E-value=14 Score=39.07 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=34.0
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCc--HHHHHHHHHHcCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRI--PKVQKLLQDFFNG 43 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssri--P~vq~~l~~~f~~ 43 (714)
.++++|+++|++++|||.|++.|-+|.+ |.=-+.|.+.|+.
T Consensus 288 ai~~al~~agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~~ 330 (424)
T 1tqy_A 288 TIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGE 330 (424)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHHHcCCCHHHCCEEEecCccCcCcCHHHHHHHHHHhcc
Confidence 5789999999999999999999999875 4445667778853
No 165
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=40.94 E-value=45 Score=34.49 Aligned_cols=48 Identities=19% Similarity=0.139 Sum_probs=33.0
Q ss_pred ccceEEEEcCCCCcHH-HHHHHHHHcCCC---cccCCCCCchhhHhhHHHHH
Q psy5547 544 QIHDIVLVGGSTRIPK-VQKLLQDFFNGK---ELNKSINPDEAVAYGAAVQA 591 (714)
Q Consensus 544 ~i~~ViLvGG~s~~p~-l~~~l~~~f~~~---~v~~~~~p~~ava~GAa~~a 591 (714)
+++.|+|.||.+..+. +.+.|.+.+... .+........+.+.||+..+
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHH
Confidence 5689999999887544 888888887332 22223233358899998765
No 166
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=40.78 E-value=14 Score=39.22 Aligned_cols=40 Identities=23% Similarity=0.304 Sum_probs=33.1
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCc--HHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRI--PKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssri--P~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.|-+|.+ |.=-+.|.+.|+
T Consensus 306 ai~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~fg 347 (438)
T 2iwz_A 306 CMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFK 347 (438)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHcCCCHHHcCEEEecCCCCcccCHHHHHHHHHHHh
Confidence 5789999999999999999999999986 333456777775
No 167
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=39.99 E-value=16 Score=38.64 Aligned_cols=41 Identities=15% Similarity=0.177 Sum_probs=33.7
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcH--HHHHHHHHHcCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIP--KVQKLLQDFFNG 43 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP--~vq~~l~~~f~~ 43 (714)
.++++|+++|++++|||.|++.|-+|.+- .=-..|.+.|++
T Consensus 301 ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~ 343 (430)
T 1ox0_A 301 AIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK 343 (430)
T ss_dssp HHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCC
Confidence 57899999999999999999999999874 222457778865
No 168
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=39.92 E-value=20 Score=35.55 Aligned_cols=68 Identities=7% Similarity=-0.093 Sum_probs=41.4
Q ss_pred HHHHHhhhhhHHHHHHHHcCCCcc-ccceEEEEcCCCCc--HHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHHHHh
Q psy5547 520 NADLFRGTMEPVEKSLRDAKMDKA-QIHDIVLVGGSTRI--PKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 595 (714)
Q Consensus 520 ~~~~~~~i~~~i~~~l~~~~~~~~-~i~~ViLvGG~s~~--p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~ 595 (714)
...++++..+.+-..+ .. ... +++.|+|.||.+.. +.+++.+++... ++ ..|..+...||+.+|....
T Consensus 212 A~~i~~~~~~~La~~i-~~--~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i---~~~~~a~~~GA~~la~~~~ 282 (291)
T 1zbs_A 212 VYSLVQNSFDDFLVRN-VL--RYNRPDLPLHFIGSVAFHYREVLSSVIKKRGL--TL---GSVLQSPMEGLIQYHHNNH 282 (291)
T ss_dssp HHHHHHHHHHHHHHHH-TG--GGCCTTSCEEEESHHHHHTHHHHHHHHHHTTC--CE---EEEESCSHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHH-hc--ccCCCCceEEEECchHHhhHHHHHHHHHHcCC--ee---cccCcCHHHHHHHHHHhhh
Confidence 3344444444444444 22 222 56789999998876 667777766531 22 2255788899999986543
No 169
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=39.90 E-value=11 Score=38.33 Aligned_cols=37 Identities=22% Similarity=0.225 Sum_probs=30.1
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.++++++-- .+.+.||
T Consensus 237 ~i~~al~~agl~~~dId~~~~H~~~~~~~~---~~~~~lg 273 (335)
T 1u6e_A 237 VGRRAMDAAGVRPDQIDVFVPHQANSRINE---LLVKNLQ 273 (335)
T ss_dssp HHHHHHHHHTCCGGGCCEEEECCSCHHHHH---HHHHHHT
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCCHHHHH---HHHHHcC
Confidence 478899999999999999999999988643 3555554
No 170
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=37.68 E-value=27 Score=39.83 Aligned_cols=51 Identities=29% Similarity=0.364 Sum_probs=39.3
Q ss_pred CCeEEEecCCcCcHHHHHHHHHHcC--CCcC---CCCCCCchhhHHHHHHHHHHHh
Q psy5547 18 IHDIVLVGGSTRIPKVQKLLQDFFN--GKEL---NKSINPDEAVAYGAAVQAAILH 68 (714)
Q Consensus 18 Id~V~LvGGssriP~vq~~l~~~f~--~~~i---~~~~n~deaVA~GAA~~aa~l~ 68 (714)
++.|+|.||-..=..+++.|.+.+. +-++ ....--|-++|+|+|++|+...
T Consensus 694 ~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 694 INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 5789999999999999999988762 2222 1233459999999999987553
No 171
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=37.39 E-value=23 Score=35.28 Aligned_cols=61 Identities=18% Similarity=0.130 Sum_probs=38.1
Q ss_pred HHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCC--cHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHH
Q psy5547 522 DLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTR--IPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 522 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~--~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~ 592 (714)
.++++..+.+-..+...-. . +++.|+|.||.+. .|++.+.+++.+ . .|+.+.+.||+++|.
T Consensus 230 ~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 230 ALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 3444444444444433322 2 5688999999865 567777777754 1 256778899998874
No 172
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=36.48 E-value=14 Score=38.66 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=30.5
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.++++++ -+.+.+.+|
T Consensus 292 ~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~lg 328 (393)
T 1ted_A 292 VVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSLG 328 (393)
T ss_dssp HHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHcC
Confidence 4689999999999999999999999885 344566663
No 173
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=36.26 E-value=37 Score=38.77 Aligned_cols=51 Identities=16% Similarity=0.369 Sum_probs=39.0
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCc--CCCC--C-CCchhhHHHHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKE--LNKS--I-NPDEAVAYGAAVQAAIL 67 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~--i~~~--~-n~deaVA~GAA~~aa~l 67 (714)
.++.|.|.||-..=-.+++.|.+.+.... +..+ + --|..+|+|+|++|+..
T Consensus 705 g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 705 GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 36789999999999999999999874332 2222 1 24999999999998653
No 174
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=36.07 E-value=1.6e+02 Score=31.26 Aligned_cols=53 Identities=11% Similarity=0.165 Sum_probs=33.1
Q ss_pred CCcEEEEEEeCCceEEEEEEEEeCCE---EEEEEecCCCCc---cHHHHHHHHHHHHHH
Q psy5547 405 GERNVLIFDLGGGTFDVSILTIEDGI---FEVKSTAGDTHL---GGEDFDNRMVNHFVQ 457 (714)
Q Consensus 405 ~~~~vlVvD~GggT~Dvsv~~~~~~~---~~v~~~~g~~~l---GG~~id~~l~~~l~~ 457 (714)
....++.+|+||.++-+.++...+.. .......-.... ++..+-..|++.+.+
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~ 117 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAA 117 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999987665 222222211222 556655555555443
No 175
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=35.55 E-value=95 Score=30.87 Aligned_cols=50 Identities=20% Similarity=0.242 Sum_probs=33.8
Q ss_pred ccceEEEEcCCCCc-----HHHHHHHHHHcC------CCcccCCCCCchhhHhhHHHHHHH
Q psy5547 544 QIHDIVLVGGSTRI-----PKVQKLLQDFFN------GKELNKSINPDEAVAYGAAVQAAI 593 (714)
Q Consensus 544 ~i~~ViLvGG~s~~-----p~l~~~l~~~f~------~~~v~~~~~p~~ava~GAa~~a~~ 593 (714)
+++.|+|-||.+.. +.+++.+++.+. ..++....-.+.+.++|||.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 45789999998875 457777776652 123333444567899999988753
No 176
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=35.54 E-value=48 Score=33.98 Aligned_cols=51 Identities=16% Similarity=0.154 Sum_probs=38.2
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCcCC----CCCCCchhhHHHHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELN----KSINPDEAVAYGAAVQAAIL 67 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~i~----~~~n~deaVA~GAA~~aa~l 67 (714)
..+.|++.||+.+-|.+-++|++.+++..+. ..+++|--=|..-|++|..-
T Consensus 283 ~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~ 337 (371)
T 3qbx_A 283 DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHRF 337 (371)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHHH
T ss_pred CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHHH
Confidence 4689999999999999999999999644332 33567755566677777653
No 177
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=34.83 E-value=91 Score=32.04 Aligned_cols=48 Identities=25% Similarity=0.281 Sum_probs=31.9
Q ss_pred cceEEEEcCCCCc-HHHHHHHHHHcC-------CCcccCCCCCchhhHhhHHHHHH
Q psy5547 545 IHDIVLVGGSTRI-PKVQKLLQDFFN-------GKELNKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 545 i~~ViLvGG~s~~-p~l~~~l~~~f~-------~~~v~~~~~p~~ava~GAa~~a~ 592 (714)
++.|+|.||.+.. +++.+.+++.+. ..++......+.+.+.||+.++.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 5689999998864 777777766551 12333333455688999998764
No 178
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=34.55 E-value=78 Score=35.02 Aligned_cols=57 Identities=14% Similarity=0.216 Sum_probs=46.3
Q ss_pred EEEecHHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCcHHHHHHHH
Q psy5547 508 YTSVTRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQ 565 (714)
Q Consensus 508 ~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~l~~~l~ 565 (714)
.+.||..++.++... -..+..-++-+|+.++++..+|+.|+|.||++.-=-+.+.+.
T Consensus 499 ~i~itq~DIr~~qlA-KaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIRA-KAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 478999999886543 345677788889999999999999999999998766666665
No 179
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=33.91 E-value=57 Score=32.03 Aligned_cols=51 Identities=18% Similarity=0.124 Sum_probs=31.9
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcC-----------CCcCCCCCCCchhhHHHHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFN-----------GKELNKSINPDEAVAYGAAVQAAIL 67 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~-----------~~~i~~~~n~deaVA~GAA~~aa~l 67 (714)
|.+.|+|-||-+..|.+.+.|.+.+. ..++..+-..+.+.++|||.++...
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~~ 288 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQE 288 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHHh
Confidence 45678888888766665555544331 1223333346778999999887543
No 180
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=33.58 E-value=39 Score=33.97 Aligned_cols=48 Identities=21% Similarity=0.247 Sum_probs=31.9
Q ss_pred CCCeEEEecCCcCc-HHHH----HHHHHHcC-----CCcCCCCCCCchhhHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRI-PKVQ----KLLQDFFN-----GKELNKSINPDEAVAYGAAVQA 64 (714)
Q Consensus 17 dId~V~LvGGssri-P~vq----~~l~~~f~-----~~~i~~~~n~deaVA~GAA~~a 64 (714)
|.+.|+|-||-++. |.+. +.|.+..- ..++..+-..+.+.++|||.++
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 45789999998876 5444 44444421 1234455567789999999876
No 181
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=33.44 E-value=13 Score=38.77 Aligned_cols=37 Identities=16% Similarity=0.288 Sum_probs=30.8
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.++++++- +.+.+.++
T Consensus 257 ~i~~aL~~agl~~~dId~v~~H~~~~~i~---d~~~~~lg 293 (382)
T 1u0m_A 257 ALKELAGEHGWDASDLDFYIVHAGGPRIL---DDLSTFLE 293 (382)
T ss_dssp HHHHHHHTTSCCSSCCSCCEEECSHHHHH---HHHHHHSC
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCCHHHH---HHHHHHcC
Confidence 46899999999999999999999998753 45666664
No 182
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=33.28 E-value=90 Score=30.03 Aligned_cols=44 Identities=20% Similarity=0.293 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHcCCCccccceEEEEcCCCCc
Q psy5547 513 RARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI 557 (714)
Q Consensus 513 r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~ 557 (714)
++..+.+...++......|+..+++..... .--.|+++||.+.+
T Consensus 180 ~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~-~~~~vi~TGG~a~~ 223 (249)
T 3bex_A 180 KDTEENIRLGVVNGSVYALEGIIGRIKEVY-GDLPVVLTGGQSKI 223 (249)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEEEESTTSGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCChHH
Confidence 344555555555555555555544332111 12469999999863
No 183
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=31.60 E-value=25 Score=38.88 Aligned_cols=24 Identities=38% Similarity=0.733 Sum_probs=21.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHHc
Q psy5547 545 IHDIVLVGGSTRIPKVQKLLQDFF 568 (714)
Q Consensus 545 i~~ViLvGG~s~~p~l~~~l~~~f 568 (714)
-+.|++|||+|.+|++.-.|.+.+
T Consensus 501 y~nilivGggski~g~~~~L~dri 524 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRI 524 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHH
Confidence 378999999999999999999887
No 184
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=30.29 E-value=18 Score=38.16 Aligned_cols=41 Identities=12% Similarity=0.198 Sum_probs=32.7
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHH--HHHHHHcCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQ--KLLQDFFNG 43 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq--~~l~~~f~~ 43 (714)
.++++|+++|++++|||.|++.|-+|.+-=.- ..|...|+.
T Consensus 284 ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~ 326 (415)
T 1tqy_B 284 AIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGR 326 (415)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHHHHHHHHHhCC
Confidence 57899999999999999999999999654322 456777754
No 185
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=29.62 E-value=83 Score=35.03 Aligned_cols=50 Identities=22% Similarity=0.286 Sum_probs=39.9
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCcC---CCCCCCchhhHHHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKEL---NKSINPDEAVAYGAAVQAAI 66 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~i---~~~~n~deaVA~GAA~~aa~ 66 (714)
.++.|+|.||-..-..+++.|.+.+.+-++ ....--|-++|+|.|++|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 367999999999999999999998732222 23455699999999999864
No 186
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=29.37 E-value=24 Score=38.02 Aligned_cols=47 Identities=21% Similarity=0.388 Sum_probs=33.7
Q ss_pred CeEEEecCCcCcHHHHHHHHHHc----CCC--cCCCC---CCCchhhHHHHHHHHH
Q psy5547 19 HDIVLVGGSTRIPKVQKLLQDFF----NGK--ELNKS---INPDEAVAYGAAVQAA 65 (714)
Q Consensus 19 d~V~LvGGssriP~vq~~l~~~f----~~~--~i~~~---~n~deaVA~GAA~~aa 65 (714)
..|+|.||+|.+|.+.+.|.+-+ +.- ++... .++..++=+|++++|.
T Consensus 415 ~nIvLsGGst~~pGf~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~WiGgsilas 470 (498)
T 3qb0_A 415 HNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTS 470 (498)
T ss_dssp TTEEEESGGGGSTTHHHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHHHHHHHHT
T ss_pred cCEEEeCCccCchhHHHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEcccEEEec
Confidence 67999999999999998887544 211 22222 3456788899988873
No 187
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=29.37 E-value=2.9e+02 Score=24.20 Aligned_cols=47 Identities=11% Similarity=0.161 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhhcC---CccCHHHHHHHHHHHHHhhhHHHHHHHh
Q psy5547 253 ERTQILDKCNDVIKWLDSN---QLAEKEEFEDKQKELEAICNPIITKLYQ 299 (714)
Q Consensus 253 e~~~l~~~l~e~~~WL~~~---~~a~~~~~~~k~~eL~~~~~~i~~r~~~ 299 (714)
+|..+.+.|.+........ -....++|+.|+..++++...+...+..
T Consensus 97 dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~s 146 (152)
T 4fla_A 97 DRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQS 146 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5777777777776655432 1234578888888888877777766654
No 188
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=29.21 E-value=34 Score=34.66 Aligned_cols=37 Identities=16% Similarity=0.139 Sum_probs=31.0
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.+++..++.|| -+.+.+.++
T Consensus 239 ~i~~~l~~~gl~~~did~~~~Hq~~~~i---~~~~~~~lg 275 (333)
T 4dfe_A 239 VAVEALEKANLSAEQIDWLIPHQANIRI---MQSTCRKLG 275 (333)
T ss_dssp HHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 4788999999999999999999999875 366666664
No 189
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=28.98 E-value=19 Score=37.92 Aligned_cols=28 Identities=29% Similarity=0.348 Sum_probs=25.8
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCc
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRI 30 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssri 30 (714)
.++++|+++|++++|||.|++.|-+|.+
T Consensus 290 ai~~al~~agl~~~dId~ve~HgtgT~~ 317 (416)
T 2wge_A 290 AMTRSLELAGLSPADIDHVNAHGTATPI 317 (416)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCCCHH
T ss_pred HHHHHHHHcCCCHHHCCEEEECCCCCcC
Confidence 5789999999999999999999999975
No 190
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=28.83 E-value=19 Score=38.07 Aligned_cols=40 Identities=20% Similarity=0.264 Sum_probs=31.7
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcH--HHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIP--KVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP--~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.|-+|.+- .=-..|...|+
T Consensus 299 ai~~al~~agl~~~dId~ve~HgtgT~~~D~~E~~al~~~~~ 340 (431)
T 2ix4_A 299 AMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFS 340 (431)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHHc
Confidence 47899999999999999999999998752 23344666664
No 191
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=28.65 E-value=42 Score=33.30 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=35.3
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCC-----cCCCCCCCchhhHHHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGK-----ELNKSINPDEAVAYGAAVQAAI 66 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~-----~i~~~~n~deaVA~GAA~~aa~ 66 (714)
|.+.|+|-||-++.|.+.+.|++.+... .+..+-..+.|.++|||.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 5578999999888776667776665321 2334445678999999988754
No 192
>4i95_A Putative uncharacterized protein; lipocalin-like domain of PF13924 family, structural genomics center for structural genomics, JCSG; HET: MSE; 1.81A {Bacteroides eggerthii} PDB: 4gzv_A
Probab=26.29 E-value=2.1e+02 Score=24.42 Aligned_cols=46 Identities=13% Similarity=0.128 Sum_probs=32.0
Q ss_pred eccccccccCcceeEEEEecCCCCCCCcceEEEEEEecCCeeEEEEE
Q psy5547 131 EGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVSA 177 (714)
Q Consensus 131 eg~~~~~~~~~~i~~~~i~~~~~~~~g~~~i~v~~~~d~~G~l~v~~ 177 (714)
+|.....+++.+.-.+.-+.-++...|.. =.++|++..+|+|.++-
T Consensus 63 ~GtY~~~SD~~Y~E~IeKni~lp~l~g~~-N~l~fE~~~dnlm~lky 108 (142)
T 4i95_A 63 YGTYRQISAAAYKESIEKNIHLPMLDNKD-NILEFEMGAGGVMYLKY 108 (142)
T ss_dssp EEEEEEEETTEEEEEEEEESSSGGGTTEE-EEEEEEECSTTEEEEEE
T ss_pred eEEEEecCCcceeeeecccccCcccCCCc-cEEEEEEccCCEEEEEE
Confidence 45555566666666666554555566654 37899999999999986
No 193
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=25.96 E-value=82 Score=32.46 Aligned_cols=61 Identities=16% Similarity=0.107 Sum_probs=39.9
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCC-cCcHHHHHHHHHHcCCCcCC--CCCCCchhhHHHHHHH
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGS-TRIPKVQKLLQDFFNGKELN--KSINPDEAVAYGAAVQ 63 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGs-sriP~vq~~l~~~f~~~~i~--~~~n~deaVA~GAA~~ 63 (714)
.++++|+++|++++|||.|++.-.+ ..+|..-..|...+|-.... ..+...-|.+...|+.
T Consensus 88 Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~ 151 (379)
T 3euo_A 88 ASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALR 151 (379)
T ss_dssp HHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHH
T ss_pred HHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHH
Confidence 4688999999999999998776433 24788888888888643321 2232234444444443
No 194
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=25.92 E-value=1e+02 Score=31.59 Aligned_cols=51 Identities=18% Similarity=0.235 Sum_probs=36.2
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCcCC----CCCCCchhhHHHHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELN----KSINPDEAVAYGAAVQAAIL 67 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~i~----~~~n~deaVA~GAA~~aa~l 67 (714)
..+.|++.||+.+-|.+-++|++.+++.++. ..+++|--=|..-|++|..-
T Consensus 289 ~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~~ 343 (370)
T 3cqy_A 289 QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMRY 343 (370)
T ss_dssp SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHHH
Confidence 4568999999999999999999999653332 23566644444446777543
No 195
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=25.80 E-value=2.2e+02 Score=29.94 Aligned_cols=30 Identities=30% Similarity=0.629 Sum_probs=24.2
Q ss_pred CCcEEEEEEeCCceEEEEEEEEeCCEEEEEE
Q psy5547 405 GERNVLIFDLGGGTFDVSILTIEDGIFEVKS 435 (714)
Q Consensus 405 ~~~~vlVvD~GggT~Dvsv~~~~~~~~~v~~ 435 (714)
+...++.+|+||.++-+.++++.++ +++..
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~ 86 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITS 86 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEE
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEE
Confidence 4567999999999999999999765 44433
No 196
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=25.72 E-value=59 Score=32.55 Aligned_cols=49 Identities=16% Similarity=0.148 Sum_probs=31.4
Q ss_pred CCCeEEEecCCcCc-H----HHHHHHHHHcC------CCcCCCCCCCchhhHHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRI-P----KVQKLLQDFFN------GKELNKSINPDEAVAYGAAVQAA 65 (714)
Q Consensus 17 dId~V~LvGGssri-P----~vq~~l~~~f~------~~~i~~~~n~deaVA~GAA~~aa 65 (714)
|.+.|+|-||-++. | .+++.|.+... ..++..+-..+.|.++|||..+.
T Consensus 252 ~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~ 311 (321)
T 3vgl_A 252 DPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR 311 (321)
T ss_dssp CCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHH
Confidence 45678888888764 4 45555555431 11334444578999999998763
No 197
>2nr5_A Hypothetical protein SO2669; PSI-2, MCSG, MAD, structural G protein structure initiative, midwest center for structural genomics; 1.90A {Shewanella oneidensis} SCOP: a.25.6.1
Probab=25.67 E-value=1.3e+02 Score=20.74 Aligned_cols=24 Identities=17% Similarity=0.258 Sum_probs=16.4
Q ss_pred hccCCHHHHHHHHHHHHHHHHHhh
Q psy5547 246 KDKISSAERTQILDKCNDVIKWLD 269 (714)
Q Consensus 246 ~~~~s~~e~~~l~~~l~e~~~WL~ 269 (714)
.+...-+|.+-..+.+.++++||-
T Consensus 38 sdssdmqeveiwtnrikeledwlw 61 (67)
T 2nr5_A 38 SDSSDMQEVEIWTNRIKELEDWLW 61 (67)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHHhh
Confidence 334445677778899999999994
No 198
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=25.31 E-value=42 Score=34.10 Aligned_cols=43 Identities=9% Similarity=0.213 Sum_probs=34.7
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCCc--CcHHHHHHHHHHcCCC
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGST--RIPKVQKLLQDFFNGK 44 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGss--riP~vq~~l~~~f~~~ 44 (714)
+..+++|+++|++++|||.|+++.-+. .+|..--.|.+.+|-.
T Consensus 68 ~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~ 112 (350)
T 4ewp_A 68 GAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT 112 (350)
T ss_dssp HHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC
Confidence 346899999999999999998776553 5798888888888643
No 199
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=25.28 E-value=29 Score=36.37 Aligned_cols=41 Identities=17% Similarity=0.237 Sum_probs=33.5
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcH--HHHHHHHHHcCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIP--KVQKLLQDFFNG 43 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP--~vq~~l~~~f~~ 43 (714)
.++++|+++|++++|||.|++.|=+|.+- .=-+.|...|+.
T Consensus 282 a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~al~~~~~~ 324 (413)
T 3o04_A 282 AMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGE 324 (413)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhcc
Confidence 47899999999999999999999998753 444667777853
No 200
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=24.95 E-value=76 Score=31.59 Aligned_cols=50 Identities=20% Similarity=0.254 Sum_probs=34.2
Q ss_pred cCCCeEEEecCCcCc-----HHHHHHHHHHcCC------CcCCCCCCCchhhHHHHHHHHH
Q psy5547 16 AQIHDIVLVGGSTRI-----PKVQKLLQDFFNG------KELNKSINPDEAVAYGAAVQAA 65 (714)
Q Consensus 16 ~dId~V~LvGGssri-----P~vq~~l~~~f~~------~~i~~~~n~deaVA~GAA~~aa 65 (714)
=|.+.|+|-||-++. |.+++.|++++.. .++..+--.+.+.++|||.++-
T Consensus 238 ~dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 238 FDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp HCCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred hCCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 355788888887765 5788888877621 1222333467899999998874
No 201
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=24.65 E-value=78 Score=31.71 Aligned_cols=59 Identities=15% Similarity=0.187 Sum_probs=38.7
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCC--cCcHHHHHHHHHHcCCCc-CCCCCCCchhhHHHHHH
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGS--TRIPKVQKLLQDFFNGKE-LNKSINPDEAVAYGAAV 62 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGs--sriP~vq~~l~~~f~~~~-i~~~~n~deaVA~GAA~ 62 (714)
.++++|+++|++++|||.|++...+ ...|..-..|...+|-.. ....++ .-|.+.-.|+
T Consensus 59 Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~v~-~aC~s~~~al 120 (321)
T 3il6_A 59 VAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAFAFDIS-AACSGFVYAL 120 (321)
T ss_dssp HHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTTCEEEEEC-CGGGHHHHHH
T ss_pred HHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCCceEEEeC-cccHHHHHHH
Confidence 4688999999999999988775432 246877788888886432 233344 3344333444
No 202
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=24.59 E-value=47 Score=33.77 Aligned_cols=37 Identities=8% Similarity=0.001 Sum_probs=30.5
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.+++..++.|| .+.+.+.++
T Consensus 251 ~i~~~l~~~gl~~~did~~v~Hq~~~~i---~~~~~~~lg 287 (345)
T 3s21_A 251 TFVAAKQVLGWAVEELDQFVIHQVSRPH---TAAFVKSFG 287 (345)
T ss_dssp HHHHHHHHHCCCGGGCSEEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHcCCCHHHCCEEEeCCCCHHH---HHHHHHHcC
Confidence 4678999999999999999999999875 355666663
No 203
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=24.49 E-value=52 Score=33.81 Aligned_cols=42 Identities=31% Similarity=0.341 Sum_probs=31.1
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCC-cCcHHHHHHHHHHcCCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGS-TRIPKVQKLLQDFFNGK 44 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGs-sriP~vq~~l~~~f~~~ 44 (714)
.+.++|+++|+++++||.|++...+ ..+|..-..|...+|-.
T Consensus 102 Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~ 144 (374)
T 2h84_A 102 ACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLN 144 (374)
T ss_dssp HHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcC
Confidence 4678999999999999987754332 24676777888888643
No 204
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=24.36 E-value=31 Score=36.37 Aligned_cols=41 Identities=17% Similarity=0.071 Sum_probs=32.3
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCc-HHHHHHHHHHcCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRI-PKVQKLLQDFFNG 43 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssri-P~vq~~l~~~f~~ 43 (714)
.++++|+++|++++|||.|++.|-+|.- |..-+.|.+.|+.
T Consensus 298 ai~~al~~Agl~~~dId~ve~HgtgT~~d~~e~~al~~~~g~ 339 (428)
T 3kzu_A 298 CMVAALKRAGIVPDEIDYINAHGTSTMADTIELGAVERVVGE 339 (428)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCSSTTHHHHHHHHHHHHGG
T ss_pred HHHHHHHHcCCCHHHeeEEEecCCcchhhHHHHHHHHHHhcc
Confidence 4789999999999999999999999833 2233567777754
No 205
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=24.27 E-value=1.1e+02 Score=30.41 Aligned_cols=44 Identities=18% Similarity=0.247 Sum_probs=27.8
Q ss_pred cCCCeeEeeechhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEE
Q psy5547 374 AGLNVLRIINEPTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSIL 424 (714)
Q Consensus 374 AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~ 424 (714)
.|++ +.+.++..|||++-...... ...++++++-+|-| +-.+++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~-----~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEA-----XGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT-----TTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCC-----CCCCcEEEEEECCc-eEEEEE
Confidence 3775 68899999999875432211 13456788888876 334444
No 206
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=23.97 E-value=1e+02 Score=33.69 Aligned_cols=54 Identities=20% Similarity=0.223 Sum_probs=40.7
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCCcCC-CCCCCchhhHHHHHHHHHHHhCC
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELN-KSINPDEAVAYGAAVQAAILHGD 70 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~~i~-~~~n~deaVA~GAA~~aa~l~~~ 70 (714)
.++.|.|.||...=-.+++.|.+..+-..+. ...--|..+++|+|+++....+.
T Consensus 307 g~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g~ 361 (576)
T 3ven_A 307 GERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELGD 361 (576)
T ss_dssp TCSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTTC
T ss_pred CCCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcCC
Confidence 4789999999999999999998764322221 22457999999999999876443
No 207
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=23.76 E-value=33 Score=36.20 Aligned_cols=40 Identities=25% Similarity=0.351 Sum_probs=32.4
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHH--HHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPK--VQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~--vq~~l~~~f~ 42 (714)
.++++|+++|++++|||.|++.|=+|..-- --..+.+.|+
T Consensus 297 ai~~al~~Agl~~~dId~ve~HgtgT~~~d~~e~~a~~~~~g 338 (427)
T 3ho9_A 297 AMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFG 338 (427)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHcCCCHHHccEEEecCCcCCCcCHHHHHHHHHHhc
Confidence 478999999999999999999998886533 3455667775
No 208
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=23.44 E-value=1.9e+02 Score=28.92 Aligned_cols=57 Identities=23% Similarity=0.243 Sum_probs=33.3
Q ss_pred CCCHHH-HHHHHHHHHHcCCCeeEeeechhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEE
Q psy5547 358 YFNDSQ-RQATKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSIL 424 (714)
Q Consensus 358 ~~~~~~-r~~l~~A~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~ 424 (714)
.|.... ++.+.+. .|++ +.+.++..|||++....... ...+.++++-+|.| +-.+++
T Consensus 117 ~w~~~~l~~~l~~~---~~~p-v~v~NDa~aaal~E~~~g~~-----~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 117 EWNSVDLRTPLSDT---LHLP-VWVDNDGNCAALAERKFGQG-----KGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp SCSSEECHHHHHHH---HCSC-EEEEEHHHHHHHHHHHTSTT-----TTCSCEEEEEESSS-EEEEEE
T ss_pred CCcCCCHHHHHHHH---HCCC-EEEechhHHHHHHHHHhCCC-----CCCCcEEEEEECCC-EEEEEE
Confidence 465322 3444443 3665 67899999999875332110 12356788888887 444444
No 209
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=23.23 E-value=93 Score=31.66 Aligned_cols=41 Identities=22% Similarity=0.262 Sum_probs=32.7
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCC--cCcHHHHHHHHHHcCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGS--TRIPKVQKLLQDFFNG 43 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGs--sriP~vq~~l~~~f~~ 43 (714)
.++++|+++|++++|||.|++...+ ...|..-..|...+|-
T Consensus 73 Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl 115 (354)
T 4efi_A 73 AGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDL 115 (354)
T ss_dssp HHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCc
Confidence 4688999999999999998876433 3567778888888864
No 210
>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=22.94 E-value=3.6e+02 Score=23.29 Aligned_cols=66 Identities=14% Similarity=0.147 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhcCCCCCCCCCC-CCCCCCCCCCCCCccchhhhHHHHHHHHHHH
Q psy5547 276 KEEFEDKQKELEAICNPIITKLYQAGGAPGGFPGA-PGAAPGAGAGPGPTIEEVSSMVLTKMKETAE 341 (714)
Q Consensus 276 ~~~~~~k~~eL~~~~~~i~~r~~~~~~rp~~~~~~-~~~~~~~~~~~~~s~eev~a~~L~~l~~~~~ 341 (714)
-+.|.+..++.....+.|..|+...++.|..-... -........+...++.+++...+......+.
T Consensus 45 h~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~~~s~i~~~~~~~~~~e~l~~~l~~e~~~~~ 111 (158)
T 2c41_A 45 HLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVATVTPSSGQLTVKQMIEEAIANHELIIT 111 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHHHHCCSCCCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 45678888999999999999999999998633210 0000001122356788888887777655543
No 211
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=22.83 E-value=92 Score=31.52 Aligned_cols=60 Identities=13% Similarity=0.154 Sum_probs=38.6
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCC--cCcHHHHHHHHHHcCCC--cCCCCCCCchhhHHHHHH
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGS--TRIPKVQKLLQDFFNGK--ELNKSINPDEAVAYGAAV 62 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGs--sriP~vq~~l~~~f~~~--~i~~~~n~deaVA~GAA~ 62 (714)
+.++++|+++|++++|||.|++...+ ...|..-..|...+|-. .....++. -|.+.-.|+
T Consensus 74 ~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~-aC~s~~~al 137 (345)
T 3s21_A 74 QAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFDVAN-ACLAFINGM 137 (345)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEECCC-GGGHHHHHH
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEeECC-cCHHHHHHH
Confidence 34688999999999999987664322 24677777888888543 23345554 344333344
No 212
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=22.80 E-value=42 Score=32.96 Aligned_cols=48 Identities=19% Similarity=0.206 Sum_probs=32.0
Q ss_pred CCCeEEEecCCcCcHHHHHHHHHHcCCC------cCCCCCCCchhhHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRIPKVQKLLQDFFNGK------ELNKSINPDEAVAYGAAVQA 64 (714)
Q Consensus 17 dId~V~LvGGssriP~vq~~l~~~f~~~------~i~~~~n~deaVA~GAA~~a 64 (714)
|.+.|+|-||-+..|.+.+.|.+.+... ++..+...+.+.++|||.++
T Consensus 233 ~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 233 DCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 3467888888776677777777666321 22233456778999999876
No 213
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=22.69 E-value=34 Score=35.66 Aligned_cols=36 Identities=11% Similarity=0.087 Sum_probs=29.0
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcHHHHHHHHHH
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDF 40 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP~vq~~l~~~ 40 (714)
.++++|+++|++++|||.+++.+.++++ +++..+..
T Consensus 212 ~~~~~L~~agl~~~did~~~~H~~~~~~--~~~~~~~l 247 (396)
T 1xpm_A 212 SWNEYAKRQGKSLADFASLCFHVPFTKM--GKKALESI 247 (396)
T ss_dssp HHHHHHHHHTCCGGGCSEEEECCSSHHH--HHHHHHTT
T ss_pred HHHHHHHHcCCCHHHCCEEEecCCchHH--HHHHHHHH
Confidence 4788999999999999999999999886 44444433
No 214
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=22.69 E-value=75 Score=31.52 Aligned_cols=49 Identities=18% Similarity=0.176 Sum_probs=32.7
Q ss_pred CCCeEEEecCCcCc----HHHHHHHHHHcCC------------CcCCCCCCCchhhHHHHHHHHH
Q psy5547 17 QIHDIVLVGGSTRI----PKVQKLLQDFFNG------------KELNKSINPDEAVAYGAAVQAA 65 (714)
Q Consensus 17 dId~V~LvGGssri----P~vq~~l~~~f~~------------~~i~~~~n~deaVA~GAA~~aa 65 (714)
|.+.|+|-||-++. |.+++.+.+.... ..+..+--.+.|.++|||.++-
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 56788888887764 5677777766411 0133344467899999998874
No 215
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=22.52 E-value=13 Score=36.93 Aligned_cols=46 Identities=11% Similarity=-0.014 Sum_probs=29.3
Q ss_pred ccceEEEEcCCCCcHHHHHHHHHHcCCCcccCCCCCchhhHhhHHHHHH
Q psy5547 544 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 592 (714)
Q Consensus 544 ~i~~ViLvGG~s~~p~l~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~ 592 (714)
+++.|+|.||.+.. +.+.|++.+.. +......+..+...||+++|.
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~-~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQ-TGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTT-TTCCEEEECSCTHHHHHTTSS
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhc-CCcEEeecCCCHHHHHHHHHH
Confidence 56789999998776 66777777633 111111344677889987763
No 216
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=22.15 E-value=52 Score=38.51 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=34.5
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCc--HHHHHHHHHHcCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRI--PKVQKLLQDFFNG 43 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssri--P~vq~~l~~~f~~ 43 (714)
.++++|+++|++++|||.|+..|-+|.+ |.=-+.|.+.|+.
T Consensus 313 ai~~Al~~Agl~p~dId~veaHgtgT~~gD~~E~~al~~~fg~ 355 (917)
T 2hg4_A 313 VIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGA 355 (917)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCCCTTHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHcCCCHHHCCEEeeccCCCccCcHHHHHHHHHHhcc
Confidence 5789999999999999999999999987 4444677788853
No 217
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=22.10 E-value=27 Score=36.61 Aligned_cols=42 Identities=24% Similarity=0.251 Sum_probs=33.8
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcH--HHHHHHHHHcCCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIP--KVQKLLQDFFNGK 44 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP--~vq~~l~~~f~~~ 44 (714)
.++++|+++|++++|||.|++.|=+|.+- .=-..|...|+..
T Consensus 284 ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~~~~ 327 (412)
T 4ewg_A 284 AMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATARTFGER 327 (412)
T ss_dssp HHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCCHHHCCEEEccCCCCccccHHHHHHHHHHcCCC
Confidence 57899999999999999999999888754 3335677888643
No 218
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=21.97 E-value=72 Score=33.08 Aligned_cols=41 Identities=10% Similarity=0.137 Sum_probs=31.9
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCC--cCcHHHHHHHHHHcCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGS--TRIPKVQKLLQDFFNG 43 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGs--sriP~vq~~l~~~f~~ 43 (714)
.++++|+++|++++|||.|++...+ ..+|..-..|...+|-
T Consensus 124 Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl 166 (392)
T 3led_A 124 AAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGL 166 (392)
T ss_dssp HHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCC
Confidence 4688999999999999998864332 3568777778888864
No 219
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=21.66 E-value=98 Score=32.68 Aligned_cols=56 Identities=18% Similarity=0.258 Sum_probs=45.7
Q ss_pred CCCccchhhhHHHHHHHHHHHHHh-CCCCCeEEEe-----------eCC-------------CCCHHHHHHHHHHHHHcC
Q psy5547 321 PGPTIEEVSSMVLTKMKETAEAYL-GKTVSNAVIT-----------VPA-------------YFNDSQRQATKDSGTIAG 375 (714)
Q Consensus 321 ~~~s~eev~a~~L~~l~~~~~~~~-~~~~~~~vit-----------VPa-------------~~~~~~r~~l~~A~~~AG 375 (714)
.|+||.++..+|++..++.-..++ +..|..+-|+ .|. .|+...+..|+++|+.+|
T Consensus 146 ~GRTpiq~Y~Dfm~SFr~~F~~~~~~~~I~eI~VGlGP~GELRYPSYp~~~gW~fPGiGEFQCYDky~~~~Lk~aA~~~G 225 (495)
T 1wdp_A 146 HGRTAIEIYSDYMKSFRENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAVARAG 225 (495)
T ss_dssp TTBCHHHHHHHHHHHHHHHTHHHHHTTCEEEEEECCSGGGBSSCCCSCGGGTCCTTCCCCCCCCSHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhccCCeeEEEEeCccccccccCCCCccccCCCCCCcceeeechHHHHHHHHHHHHHhC
Confidence 589999999999999999999999 8777777653 233 455677889999999988
Q ss_pred C
Q psy5547 376 L 376 (714)
Q Consensus 376 l 376 (714)
-
T Consensus 226 ~ 226 (495)
T 1wdp_A 226 H 226 (495)
T ss_dssp C
T ss_pred c
Confidence 4
No 220
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=21.59 E-value=94 Score=31.25 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=32.6
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCC--cCcHHHHHHHHHHcCC
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGS--TRIPKVQKLLQDFFNG 43 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGs--sriP~vq~~l~~~f~~ 43 (714)
+.++++|+++|++++|||.|++.-.+ ...|..-..|...+|-
T Consensus 71 ~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl 114 (333)
T 4dfe_A 71 IASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGI 114 (333)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCC
Confidence 35688999999999999998775332 3468778888888864
No 221
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=21.55 E-value=1.1e+02 Score=32.54 Aligned_cols=61 Identities=15% Similarity=0.096 Sum_probs=40.2
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCC-cCcHHHHHHHHHHcCCCcCC--CCCCCchhhHHHHHHH
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGS-TRIPKVQKLLQDFFNGKELN--KSINPDEAVAYGAAVQ 63 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGs-sriP~vq~~l~~~f~~~~i~--~~~n~deaVA~GAA~~ 63 (714)
.++++|+++|++++|||.|++.--+ ..+|..-..|...+|-.... ..+...-|.+...|+.
T Consensus 117 Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~ 180 (465)
T 3e1h_A 117 ASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALR 180 (465)
T ss_dssp HHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHH
T ss_pred HHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHH
Confidence 4688999999999999999876432 25788888888888643321 2232334444444543
No 222
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=21.43 E-value=40 Score=34.52 Aligned_cols=35 Identities=23% Similarity=0.257 Sum_probs=28.4
Q ss_pred hHHHHHHHcCCCccCCCeEEE-ecCCcCcHHHHHHH
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVL-VGGSTRIPKVQKLL 37 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~L-vGGssriP~vq~~l 37 (714)
.++++|+++|++++|||.+++ .-+..|+-.+.+.|
T Consensus 243 ~i~~~L~~~gl~~~did~~v~~hq~~~~~~~~~~~l 278 (357)
T 3s3l_A 243 AKTQALEDAGTAIEDIAHAVIPVSRRGTGHELHDLL 278 (357)
T ss_dssp HHHHHHHHTTCCGGGCSEEECCSCCCCSSCCHHHHH
T ss_pred HHHHHHHHcCCCHHHCCEEEecCcChHHHHHHHHHc
Confidence 578999999999999999997 66666666665554
No 223
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=21.36 E-value=53 Score=32.64 Aligned_cols=49 Identities=24% Similarity=0.294 Sum_probs=30.4
Q ss_pred CCCeEEEecCCc-Cc-H----HHHHHHHHHcCC---CcCCCCCCCchhhHHHHHHHHH
Q psy5547 17 QIHDIVLVGGST-RI-P----KVQKLLQDFFNG---KELNKSINPDEAVAYGAAVQAA 65 (714)
Q Consensus 17 dId~V~LvGGss-ri-P----~vq~~l~~~f~~---~~i~~~~n~deaVA~GAA~~aa 65 (714)
|.+.|+|-||-+ .. | .+++.|.++... ..+..+-..+.+.++|||.++-
T Consensus 237 ~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 237 DPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 456788888877 43 4 444555544311 1233444567899999998874
No 224
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=21.16 E-value=80 Score=31.19 Aligned_cols=43 Identities=23% Similarity=0.417 Sum_probs=31.5
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCC--cCcHHHHHHHHHHcCCC
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGS--TRIPKVQKLLQDFFNGK 44 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGs--sriP~vq~~l~~~f~~~ 44 (714)
+.+.++|+++|+++++||.|++..++ ...|.+-..|...+|-.
T Consensus 56 ~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~ 100 (309)
T 2ebd_A 56 QAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAK 100 (309)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCT
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC
Confidence 35688999999999999987764332 23566778888888644
No 225
>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}
Probab=21.10 E-value=2.7e+02 Score=24.11 Aligned_cols=66 Identities=15% Similarity=0.229 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhcCCCCCCCCCC-CCCCCCCCCCCCCccchhhhHHHHHHHHHHH
Q psy5547 276 KEEFEDKQKELEAICNPIITKLYQAGGAPGGFPGA-PGAAPGAGAGPGPTIEEVSSMVLTKMKETAE 341 (714)
Q Consensus 276 ~~~~~~k~~eL~~~~~~i~~r~~~~~~rp~~~~~~-~~~~~~~~~~~~~s~eev~a~~L~~l~~~~~ 341 (714)
-..|.+..++.....+.|..|+...++.|..-... ........++.++++.+++...+......+.
T Consensus 42 h~~~~~~~~ee~~had~iaERI~~lGg~p~~~~~~~~~~s~i~~~~~~~~~~e~l~~~l~~e~~~~~ 108 (156)
T 2d5k_A 42 HVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISK 108 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCCCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 35668888889999999999999999998633100 0000011223445888888888777655543
No 226
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=20.95 E-value=3.3e+02 Score=28.65 Aligned_cols=24 Identities=38% Similarity=0.606 Sum_probs=21.2
Q ss_pred CCcEEEEEEeCCceEEEEEEEEeC
Q psy5547 405 GERNVLIFDLGGGTFDVSILTIED 428 (714)
Q Consensus 405 ~~~~vlVvD~GggT~Dvsv~~~~~ 428 (714)
....++.+|+||.++-+.+++..+
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC
T ss_pred ccceEEEEEeCCCeEEEEEEecCC
Confidence 456789999999999999999966
No 227
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=20.73 E-value=34 Score=36.38 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=33.3
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCcH--HHHHHHHHHcCC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRIP--KVQKLLQDFFNG 43 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssriP--~vq~~l~~~f~~ 43 (714)
.++++|+++|++++|||.|++.|-+|.+- .=-..|.+.|+.
T Consensus 313 ai~~al~~Agl~~~dId~ve~Hgtgt~~~d~~E~~al~~~~~~ 355 (451)
T 4ddo_A 313 AMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGV 355 (451)
T ss_dssp HHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHcCCCHHHcCEEEecCCcCcccCHHHHHHHHHHhCC
Confidence 47899999999999999999999888753 333567788854
No 228
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=20.67 E-value=2.9e+02 Score=23.42 Aligned_cols=66 Identities=12% Similarity=0.165 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHhcCCCCCCCCCC-CCCCCCCCCCCCCccchhhhHHHHHHHHHHH
Q psy5547 276 KEEFEDKQKELEAICNPIITKLYQAGGAPGGFPGA-PGAAPGAGAGPGPTIEEVSSMVLTKMKETAE 341 (714)
Q Consensus 276 ~~~~~~k~~eL~~~~~~i~~r~~~~~~rp~~~~~~-~~~~~~~~~~~~~s~eev~a~~L~~l~~~~~ 341 (714)
...+.+..++.....+.+..|+...++.|..-... ........++.++++.+++...+......+.
T Consensus 40 h~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~~~~e~l~~~l~~e~~~~~ 106 (146)
T 1jig_A 40 HEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSSVNEGTSKESAEEMVQTLVNDYSALIQ 106 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCcCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 35667888888999999999999999999633100 0000011223445888888888777665544
No 229
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=20.50 E-value=1.1e+02 Score=30.44 Aligned_cols=43 Identities=26% Similarity=0.311 Sum_probs=31.8
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCC--cCcHHHHHHHHHHcCCC
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGS--TRIPKVQKLLQDFFNGK 44 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGs--sriP~vq~~l~~~f~~~ 44 (714)
+.+.++|+++|+++++||.|++.-++ ..+|.+-..|...+|-.
T Consensus 57 ~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~ 101 (317)
T 1hnj_A 57 EAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK 101 (317)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC
Confidence 35688999999999999987653222 23677888888888643
No 230
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=20.41 E-value=1.2e+02 Score=30.26 Aligned_cols=42 Identities=19% Similarity=0.300 Sum_probs=32.2
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCC--cCcHHHHHHHHHHcCC
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGS--TRIPKVQKLLQDFFNG 43 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGs--sriP~vq~~l~~~f~~ 43 (714)
+.++++|+++|++++|||.|++...+ ..+|..-..|...+|-
T Consensus 64 ~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl 107 (323)
T 3il3_A 64 EAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNI 107 (323)
T ss_dssp HHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCC
Confidence 35688999999999999998875332 2468777788888864
No 231
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=20.39 E-value=1.3e+02 Score=30.98 Aligned_cols=42 Identities=10% Similarity=0.072 Sum_probs=31.0
Q ss_pred chHHHHHHHcCCCccCCCeEEEecC--CcCcHHHHHHHHHHcCC
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGG--STRIPKVQKLLQDFFNG 43 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGG--ssriP~vq~~l~~~f~~ 43 (714)
+.+.++|+++|++++|||.|++.-. ....|.+-..+...+|-
T Consensus 37 ~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl 80 (396)
T 4dd5_A 37 TAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGI 80 (396)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCC
Confidence 3578899999999999999876421 12346677788888854
No 232
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=20.29 E-value=2e+02 Score=30.02 Aligned_cols=90 Identities=19% Similarity=0.286 Sum_probs=48.5
Q ss_pred ccchhhhHHHHHHHHHHHHHhC---CCCCeEEEeeCCC---------------CCH-HHHHHHHHHHHHcCCCeeEeeec
Q psy5547 324 TIEEVSSMVLTKMKETAEAYLG---KTVSNAVITVPAY---------------FND-SQRQATKDSGTIAGLNVLRIINE 384 (714)
Q Consensus 324 s~eev~a~~L~~l~~~~~~~~~---~~~~~~vitVPa~---------------~~~-~~r~~l~~A~~~AGl~~~~li~E 384 (714)
++++++..+...+.+.... .+ .++..+.|++|.. |.. .-++.+.+. .|++ +.+.++
T Consensus 143 ~~~~~~~~l~~~i~~~~~~-~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~---~~~p-V~v~ND 217 (429)
T 1z05_A 143 DQDDVLARLLFEIEEFFQT-YAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKA---TGLP-VFVAND 217 (429)
T ss_dssp BHHHHHHHHHHHHHHHHHH-TTTTCCEEEEEEEEESSEEETTTTEEEECSSSBCSSBCHHHHHHHH---HCSC-EEEEEH
T ss_pred CHHHHHHHHHHHHHHHHHh-cCCCcCceEEEEEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHHH---hCCC-EEEech
Confidence 4555555555555444433 22 2344456666653 332 112333333 3765 688999
Q ss_pred hhHHHHHhhcccccCCCCCCCCcEEEEEEeCCceEEEEEE
Q psy5547 385 PTAAAIAYGLDKKVGSAAGSGERNVLIFDLGGGTFDVSIL 424 (714)
Q Consensus 385 p~AAa~~~~~~~~~~~~~~~~~~~vlVvD~GggT~Dvsv~ 424 (714)
..|||++-...... ...+.++++-+|.| +-.+++
T Consensus 218 a~aaalaE~~~g~~-----~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 218 TRAWALAEKLFGHS-----QDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HHHHHHHHHHHSTT-----TTCSSEEEEEESSS-EEEEEE
T ss_pred hHHHHHHHHHhCCC-----CCCCcEEEEEECCc-EEEEEE
Confidence 99999875332110 13456788888887 444444
No 233
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=20.24 E-value=1.2e+02 Score=31.27 Aligned_cols=42 Identities=7% Similarity=0.076 Sum_probs=29.8
Q ss_pred chHHHHHHHcCCCccCCCeEEEecC--CcCcHHHHHHHHHHcCC
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGG--STRIPKVQKLLQDFFNG 43 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGG--ssriP~vq~~l~~~f~~ 43 (714)
+.+.++|+++|++++|||.|++.-- ....|.+-..+...+|-
T Consensus 35 ~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl 78 (395)
T 4e1l_A 35 IAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGI 78 (395)
T ss_dssp HHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCC
Confidence 3578899999999999999876311 11335566677777753
No 234
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=20.20 E-value=1.1e+02 Score=32.07 Aligned_cols=43 Identities=14% Similarity=0.237 Sum_probs=33.2
Q ss_pred chHHHHHHHcCCCccCCCeEEEecCC-cCcHHHHHHHHHHcCCC
Q psy5547 2 EPVEKSLRDAKMDKAQIHDIVLVGGS-TRIPKVQKLLQDFFNGK 44 (714)
Q Consensus 2 ~~i~~~l~~a~l~~~dId~V~LvGGs-sriP~vq~~l~~~f~~~ 44 (714)
+.++++|+++|++++|||.|++.-.+ -.+|..-..|...+|-.
T Consensus 143 ~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~ 186 (413)
T 3v7i_A 143 RAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLR 186 (413)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHHHHHHHhCCC
Confidence 35688999999999999999885432 25687778888888643
No 235
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=20.07 E-value=1.2e+02 Score=31.11 Aligned_cols=49 Identities=12% Similarity=-0.089 Sum_probs=28.6
Q ss_pred cceEEEEcC-CCCcHHHHH------HHHHHcCC-----------CcccCCCCCchhhHhhHHHHHHH
Q psy5547 545 IHDIVLVGG-STRIPKVQK------LLQDFFNG-----------KELNKSINPDEAVAYGAAVQAAI 593 (714)
Q Consensus 545 i~~ViLvGG-~s~~p~l~~------~l~~~f~~-----------~~v~~~~~p~~ava~GAa~~a~~ 593 (714)
++.|+|.|| .++.+.+.+ .+.+.+.. .++......+.+..+|||.++..
T Consensus 305 p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~~ 371 (373)
T 2q2r_A 305 PLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGLD 371 (373)
T ss_dssp CSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHHHh
Confidence 456777788 666555544 55555421 12222234457889999988754
No 236
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=20.03 E-value=47 Score=38.92 Aligned_cols=40 Identities=15% Similarity=0.336 Sum_probs=33.4
Q ss_pred hHHHHHHHcCCCccCCCeEEEecCCcCc--HHHHHHHHHHcC
Q psy5547 3 PVEKSLRDAKMDKAQIHDIVLVGGSTRI--PKVQKLLQDFFN 42 (714)
Q Consensus 3 ~i~~~l~~a~l~~~dId~V~LvGGssri--P~vq~~l~~~f~ 42 (714)
.|+++|+++|++++|||.|++.|.+|.+ |.=-..|.+.|+
T Consensus 291 ~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~f~ 332 (915)
T 2qo3_A 291 VIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYG 332 (915)
T ss_dssp HHHHHHHHTTCCGGGCCEEECCCCCCTTTHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCCHHHCcEEEecCCCCccCCHHHHHHHHHHhc
Confidence 5789999999999999999999999987 333356778885
Done!