Query psy5549
Match_columns 331
No_of_seqs 214 out of 1700
Neff 11.0
Searched_HMMs 29240
Date Fri Aug 16 20:22:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5549.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5549hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 5E-48 1.7E-52 349.9 24.1 289 38-331 27-481 (510)
2 1u19_A Rhodopsin; G protein-co 100.0 6E-45 2.1E-49 314.7 18.3 285 37-331 32-318 (349)
3 2ks9_A Substance-P receptor; w 100.0 1.7E-44 5.9E-49 313.7 21.1 289 37-331 26-316 (364)
4 2rh1_A Beta-2-adrenergic recep 100.0 1.6E-44 5.5E-49 326.5 18.1 281 39-331 36-471 (500)
5 3vw7_A Proteinase-activated re 100.0 9.2E-44 3.2E-48 320.6 21.7 290 38-331 15-459 (484)
6 3odu_A C-X-C chemokine recepto 100.0 9E-44 3.1E-48 322.1 20.4 293 33-331 38-487 (502)
7 2lnl_A C-X-C chemokine recepto 100.0 2.9E-43 9.8E-48 297.4 18.1 279 39-331 7-288 (296)
8 3uon_A Human M2 muscarinic ace 100.0 3.6E-43 1.2E-47 315.3 16.6 277 40-331 20-452 (467)
9 3pbl_A D(3) dopamine receptor, 100.0 3E-43 1E-47 317.0 14.4 271 41-331 36-466 (481)
10 4dkl_A MU-type opioid receptor 100.0 6E-43 2.1E-47 313.6 15.9 285 39-331 13-450 (464)
11 2z73_A Rhodopsin; visual pigme 100.0 2.8E-42 9.6E-47 307.9 19.1 286 36-331 27-326 (448)
12 4ea3_A Fusion protein of nocic 100.0 6.6E-42 2.3E-46 304.2 19.6 283 38-331 120-404 (434)
13 3v2y_A Sphingosine 1-phosphate 100.0 7.9E-42 2.7E-46 310.1 20.0 276 38-331 58-487 (520)
14 3rze_A Histamine H1 receptor, 100.0 2.3E-42 7.7E-47 308.9 15.0 275 42-331 7-437 (452)
15 4amj_A Beta-1 adrenergic recep 100.0 5.4E-43 1.9E-47 298.1 9.7 282 39-331 7-295 (315)
16 3eml_A Human adenosine A2A rec 100.0 5.9E-42 2E-46 309.0 16.2 284 39-331 17-461 (488)
17 4eiy_A Adenosine receptor A2A/ 100.0 2.1E-42 7.3E-47 308.6 9.2 286 37-331 25-420 (447)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 9.6E-41 3.3E-45 302.9 13.2 282 39-331 178-485 (514)
19 2koe_A Human cannabinoid recep 98.2 1.4E-07 4.7E-12 52.7 -0.7 31 301-331 2-32 (40)
20 1hll_A Alpha-2A adrenergic rec 98.1 4.4E-07 1.5E-11 47.7 0.8 24 128-152 2-25 (32)
21 2ki9_A Cannabinoid receptor 2; 98.0 6.3E-07 2.2E-11 47.4 -0.8 29 254-282 1-29 (33)
22 2lot_A Apelin receptor; membra 96.6 8.3E-05 2.8E-09 45.1 -2.5 34 40-74 26-59 (64)
23 4hkr_A Calcium release-activat 57.7 59 0.002 24.6 9.1 89 137-240 87-177 (214)
24 2rdd_B UPF0092 membrane protei 29.9 63 0.0021 16.7 3.5 22 219-240 7-29 (37)
25 4ea3_A Fusion protein of nocic 28.0 2.7E+02 0.0093 23.4 12.5 75 211-287 288-362 (434)
26 3arc_I Photosystem II reaction 23.6 87 0.003 16.2 2.9 18 44-61 9-26 (38)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=5e-48 Score=349.90 Aligned_cols=289 Identities=18% Similarity=0.309 Sum_probs=233.9
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCC---chhhHHHHHHHHHHHHHHh-Hhhhhhhhhcc--CCCCch
Q psy5549 38 NREFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQ---TVTNYFLLNLTAADILFCL-SIPGIMYARVS--PQWPLG 111 (331)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~---~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~--~~~~~~ 111 (331)
.+.+.+.+..++|.+++++|++||+++++++.++|++| ++.|++++|||++|++.++ .+|+.+..... +.|.+|
T Consensus 27 ~~~~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g 106 (510)
T 4grv_A 27 TDIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFG 106 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhh
Confidence 45566788889999999999999999999998877655 6789999999999999998 99998877653 469999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheeceeec---
Q psy5549 112 DVLCKIMPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVL--- 186 (331)
Q Consensus 112 ~~~C~~~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~--- 186 (331)
+..|++..++..++..+|++++++||+|||+||+ +|++|+ .+++++..+++++|++++++++|.++.+......
T Consensus 107 ~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~-~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~ 185 (510)
T 4grv_A 107 DAGCRGYYFLRDACTYATALNVASLSVARYLAIC-HPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADG 185 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEe-ccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCC
Confidence 9999999999999999999999999999999999 999988 8999999999999999999999999987655422
Q ss_pred --cceeEEeeeCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhc---------------------
Q psy5549 187 --ESRLICTIVFPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWE--------------------- 243 (331)
Q Consensus 187 --~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~--------------------- 243 (331)
.....|...++... ...+..+..++.+++|+++++++|.+|.++++++.+...
T Consensus 186 ~~~~~~~c~~~~~~~~----~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (510)
T 4grv_A 186 THPGGLVCTPIVDTAT----VKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYT 261 (510)
T ss_dssp CCGGGEEEEECSCHHH----HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEE
T ss_pred CCCCccccccccccch----hhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccc
Confidence 23446766554321 455667777888999999999999999999986533100
Q ss_pred --------------------------------------------------------------------------------
Q psy5549 244 -------------------------------------------------------------------------------- 243 (331)
Q Consensus 244 -------------------------------------------------------------------------------- 243 (331)
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 341 (510)
T 4grv_A 262 IGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQM 341 (510)
T ss_dssp EETTEECCCSSSHHHHHHSCCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHH
T ss_pred cccccccCCCCCCCccccccCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCccccC
Confidence
Q ss_pred ----------------------------------------------------cccccchhhhhhhHHHHHHHHHHHHHHh
Q psy5549 244 ----------------------------------------------------HSHLSSHHARHTRVMRMLCISVCVILAM 271 (331)
Q Consensus 244 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~f~i~ 271 (331)
.....+..++|+|++|++++++++|++|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iC 421 (510)
T 4grv_A 342 GETGVAGFTNSLRMLNNKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVC 421 (510)
T ss_dssp HHHHHTTCHHHHHHHTTTCHHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCccccccccCCCcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001112256789999999999999999
Q ss_pred hhhHHHHHHHHHhcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 272 WLPIFLTMILIYIDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 272 ~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
|+|+++..++..+...............++..++.+|+++||++||+||+++|++|||+|
T Consensus 422 WlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aF 481 (510)
T 4grv_A 422 WLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVF 481 (510)
T ss_dssp HHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC-
T ss_pred HHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 999999999988876655444323333356778889999999999999999999999987
No 2
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=6e-45 Score=314.71 Aligned_cols=285 Identities=19% Similarity=0.350 Sum_probs=242.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-HhhhhhhhhccCCCCchhhhh
Q psy5549 37 GNREFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-SIPGIMYARVSPQWPLGDVLC 115 (331)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~~~~~~~~~~C 115 (331)
..++....+.+.++.+++++|++||+++++++.+++++|++.+++++|||++|++.++ ..|..+.....+.|..++..|
T Consensus 32 ~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C 111 (349)
T 1u19_A 32 LAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGC 111 (349)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHH
Confidence 3456677888899999999999999999999999999999999999999999999999 888888877778899999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc-cchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccceeEEee
Q psy5549 116 KIMPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK-LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRLICTI 194 (331)
Q Consensus 116 ~~~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 194 (331)
++..++..++..+|.+++++||+|||+||+ +|++++ .+++++...++++|+.+++.+.|+++++.....+.....|..
T Consensus 112 ~~~~~~~~~~~~~s~~~l~~isidRy~aI~-~P~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 190 (349)
T 1u19_A 112 NLEGFFATLGGEIALWSLVVLAIERYVVVC-KPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGI 190 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CCSSSCCCCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTTEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHheee-CCccceeeccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCceeecc
Confidence 999999999999999999999999999999 998888 889999999999999999999999888766555556668887
Q ss_pred eCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccccccchhhhhhhHHHHHHHHHHHHHHhhhh
Q psy5549 195 VFPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHSHLSSHHARHTRVMRMLCISVCVILAMWLP 274 (331)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~P 274 (331)
++...........+.....++.+++|+++++++|.++.+++|++.++.+ +..+++++++|.+++++.++++|++||+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~f~i~~~P 268 (349)
T 1u19_A 191 DYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ--ESATTQKAEKEVTRMVIIMVIAFLICWLP 268 (349)
T ss_dssp CCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSC--SSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc--cchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7654433222566777777888899999999999999999988766432 22334467889999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 275 IFLTMILIYIDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 275 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
+.+..++........... ....+...+.++|+++||+||++++++|||++
T Consensus 269 ~~i~~~~~~~~~~~~~~~-------~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~ 318 (349)
T 1u19_A 269 YAGVAFYIFTHQGSDFGP-------IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCM 318 (349)
T ss_dssp HHHHHHHHHHTTTSCCCH-------HHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHH
T ss_pred HHHHhHhheecCCcccch-------HHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHH
Confidence 999988877765433332 26678888999999999999999999999863
No 3
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=1.7e-44 Score=313.74 Aligned_cols=289 Identities=22% Similarity=0.410 Sum_probs=239.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-HhhhhhhhhccCCCCchhhhh
Q psy5549 37 GNREFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-SIPGIMYARVSPQWPLGDVLC 115 (331)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~~~~~~~~~~C 115 (331)
..+++...+...++.+++++|++||+++++++.++|++|++.+++++|||++|++.++ ..|..+.....++|..++..|
T Consensus 26 ~~~~~~~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C 105 (364)
T 2ks9_A 26 VQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYC 105 (364)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHH
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHH
Confidence 3455555666889999999999999999999999999999999999999999999988 888888877778899999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCccchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccceeEEeee
Q psy5549 116 KIMPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSKLTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRLICTIV 195 (331)
Q Consensus 116 ~~~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 195 (331)
++..++..++..++.+++++||+|||+||+ +|++++.++++...+++++|+.+++.++|...... .....+...|..+
T Consensus 106 ~~~~~~~~~~~~~s~~~l~~isidRy~aI~-~P~~~~~~~~~~~~~i~~~W~~s~~~~~p~~~~~~-~~~~~~~~~C~~~ 183 (364)
T 2ks9_A 106 KFHNFFPIAAVFASIYSMTAVAFDRYMAII-HPLQPRLSATATKVVICVIWVLALLLAFPQGYYST-TETMPSRVVCMIE 183 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCTTSCCHHHHHHHHHHHHHHHHHHHTTTTTTSC-CCBCTTCSSBCCC
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhcccccccchHHHHHHHHHHHHHHHHhHHHHHhh-heecCCCCEEeec
Confidence 999999999999999999999999999999 99999989999999999999999999998765443 3344556678877
Q ss_pred CCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccc-cccchhhhhhhHHHHHHHHHHHHHHhhhh
Q psy5549 196 FPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHS-HLSSHHARHTRVMRMLCISVCVILAMWLP 274 (331)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~f~i~~~P 274 (331)
+...........+.....++.+++|+++++++|.++.+++++++++.+.. ..+++.++++|++|+++.++++|++||+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P 263 (364)
T 2ks9_A 184 WPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLP 263 (364)
T ss_dssp CSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 65543322245677777888899999999999999999998776543222 22334477899999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 275 IFLTMILIYIDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 275 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
+.+..++............ .. ....+..++.++|+++||+||++++++||+++
T Consensus 264 ~~i~~~~~~~~~~~~~~~~-~~---~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~ 316 (364)
T 2ks9_A 264 FHIFFLLPYINPDLYLKKF-IQ---QVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGF 316 (364)
T ss_dssp HHHHHHHHHHSTTSCSSSC-CH---HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHhCcccchhHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999988877654322211 11 25667788999999999999999999999864
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=1.6e-44 Score=326.51 Aligned_cols=281 Identities=20% Similarity=0.396 Sum_probs=227.6
Q ss_pred chhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-HhhhhhhhhccCCCCchhhhhhh
Q psy5549 39 REFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-SIPGIMYARVSPQWPLGDVLCKI 117 (331)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~~~~~~~~~~C~~ 117 (331)
.+....+.++++.+++++|++||+++++++.+++++|++.|++++|||++|++.++ .+|+.+.....+.|.++...|++
T Consensus 36 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~ 115 (500)
T 2rh1_A 36 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEF 115 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhH
Confidence 34455777889999999999999999999999999999999999999999999998 89998888888899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhh-hhhhheeceeeccceeEEee
Q psy5549 118 MPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFV-PVVLWFREQEVLESRLICTI 194 (331)
Q Consensus 118 ~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~-~~~~~~~~~~~~~~~~~C~~ 194 (331)
..++..++..+|++++++||+|||+||+ +|++|+ .+++++..+++++|++++++++ |.+..+... ...+...|..
T Consensus 116 ~~~~~~~~~~~Si~~l~~isidRy~aI~-~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~-~~~~~~~c~~ 193 (500)
T 2rh1_A 116 WTSIDVLCVTASIETLCVIAVDRYFAIT-SPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRA-THQEAINCYA 193 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-CSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHee-ccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecc-cccCcceecc
Confidence 9999999999999999999999999999 999887 7899999999999999999985 544443322 2223334544
Q ss_pred eCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhh-----c--------c-----------------
Q psy5549 195 VFPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKW-----E--------H----------------- 244 (331)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~-----~--------~----------------- 244 (331)
.....+. .....|.....++.+++|+++++++|.+|++.++++.++. . .
T Consensus 194 ~~~~~~~-~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (500)
T 2rh1_A 194 EETCCDF-FTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKS 272 (500)
T ss_dssp CTTCCCC-CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESC
T ss_pred ccccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCCc
Confidence 3321111 1145677777888899999999999999999998875540 0 0
Q ss_pred --------------------------------c-----------------------------------------------
Q psy5549 245 --------------------------------S----------------------------------------------- 245 (331)
Q Consensus 245 --------------------------------~----------------------------------------------- 245 (331)
.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (500)
T 2rh1_A 273 PSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTN 352 (500)
T ss_dssp SCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred ccccccccccccccCCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCccccccccC
Confidence 0
Q ss_pred ------------------------------------------cccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q psy5549 246 ------------------------------------------HLSSHHARHTRVMRMLCISVCVILAMWLPIFLTMILIY 283 (331)
Q Consensus 246 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~ 283 (331)
...+..++|+|++|++++++++|++||+|+.+..++..
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~ 432 (500)
T 2rh1_A 353 SLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHV 432 (500)
T ss_dssp HHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhhcccccccccccccccccCCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000136889999999999999999999999999988
Q ss_pred hcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 284 IDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
+..... .. .+..+..++.++||++||+||++ |++||++|
T Consensus 433 ~~~~~~-~~-------~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af 471 (500)
T 2rh1_A 433 IQDNLI-RK-------EVYILLNWIGYVNSGFNPLIYCR-SPDFRIAF 471 (500)
T ss_dssp HSTTSS-CH-------HHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHH
T ss_pred HcCCcc-cH-------HHHHHHHHHHHHHHhhcchhhhc-cHHHHHHH
Confidence 864322 22 36788899999999999999985 99999975
No 5
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.2e-44 Score=320.60 Aligned_cols=290 Identities=16% Similarity=0.284 Sum_probs=233.7
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHhHhhhhhhhhcc-CCCCchhhhhh
Q psy5549 38 NREFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCLSIPGIMYARVS-PQWPLGDVLCK 116 (331)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~~~p~~~~~~~~-~~~~~~~~~C~ 116 (331)
.++....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++.+|..+..... +.|.++...|+
T Consensus 15 ~~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~~~~~~~C~ 94 (484)
T 3vw7_A 15 TSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCR 94 (484)
T ss_dssp TCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCCCSCHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhHHh
Confidence 45666788899999999999999999999999999999999999999999999998866655555554 48999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheecee-eccceeEEe
Q psy5549 117 IMPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQE-VLESRLICT 193 (331)
Q Consensus 117 ~~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~C~ 193 (331)
+..++..++..+|.+++++||+|||+||+ +|++|+ .+++++..+++++|++++++++|.++...... .......|.
T Consensus 95 ~~~~~~~~~~~~S~~~l~~is~dRy~aI~-~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~ 173 (484)
T 3vw7_A 95 FVTAAFYCNMYASILLMTVISIDRFLAVV-YPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCH 173 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheEEE-cccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceee
Confidence 99999999999999999999999999999 999987 79999999999999999999999998877654 334556898
Q ss_pred eeCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccc----------------------------
Q psy5549 194 IVFPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHS---------------------------- 245 (331)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~---------------------------- 245 (331)
..+...........+.....++.+++|+++++++|.+|++.++++.++.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~~~~~~~ 253 (484)
T 3vw7_A 174 DVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTK 253 (484)
T ss_dssp SSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEEEETTEEEES
T ss_pred ccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhccccccceeeeccccccC
Confidence 7766554422244466677788899999999999999999999887411000
Q ss_pred --------------------------------------------------------------------------------
Q psy5549 246 -------------------------------------------------------------------------------- 245 (331)
Q Consensus 246 -------------------------------------------------------------------------------- 245 (331)
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 333 (484)
T 3vw7_A 254 SPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFT 333 (484)
T ss_dssp SSCHHHHHHHHHHHHTSCCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred CcchhcccccccccccccCCCCCCcccccccccccccccccccccccccCcccccccccccchhhccccccCccccccch
Confidence
Q ss_pred -------------------------------------------cccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHH
Q psy5549 246 -------------------------------------------HLSSHHARHTRVMRMLCISVCVILAMWLPIFLTMILI 282 (331)
Q Consensus 246 -------------------------------------------~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~ 282 (331)
....+.++++|++|++++++++|++||+|+.++.++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~ 413 (484)
T 3vw7_A 334 NSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAH 413 (484)
T ss_dssp HHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred hhhhhhhccchhhhhhhhhhhhhhccCcccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 0001335678999999999999999999999999998
Q ss_pred HhcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 283 YIDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
.+............ ....++.++.++|+++||+||+++|++||+++
T Consensus 414 ~~~~~~~~~~~~~~---~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~ 459 (484)
T 3vw7_A 414 YSFLSHTSTTEAAY---FAYLLCVCVSSISCCIDPLIYYYASSECQRYV 459 (484)
T ss_dssp HHTCTTCTTSHHHH---HHHHHHHHHHTTHHHHHHHHHHHTSSCC----
T ss_pred HHHhccccchhHHH---HHHHHHHHHHHhccccchHHHHHhhHHHHHHH
Confidence 76644433332122 46678899999999999999999999999985
No 6
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=9e-44 Score=322.10 Aligned_cols=293 Identities=21% Similarity=0.330 Sum_probs=241.0
Q ss_pred ccccCCchhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHhHhhhhhhhhccCCCCchh
Q psy5549 33 YTEFGNREFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCLSIPGIMYARVSPQWPLGD 112 (331)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~~~p~~~~~~~~~~~~~~~ 112 (331)
+..+........+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++.+|..+..... +|.++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~p~~~~~~~~-~~~~~~ 116 (502)
T 3odu_A 38 CFREENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVA-NWYFGN 116 (502)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHT-CCCSHH
T ss_pred CccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCc
Confidence 4445566778889999999999999999999999999999999999999999999999997788888776654 799999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheeceeecccee
Q psy5549 113 VLCKIMPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRL 190 (331)
Q Consensus 113 ~~C~~~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 190 (331)
..|++..++..++..++.+++++||+|||+||+ +|++|+ .+++++..+++++|++++++++|.++..... ...+..
T Consensus 117 ~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~-~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~-~~~~~~ 194 (502)
T 3odu_A 117 FLCKAVHVIYTVNLYSSVWILAFISLDRYLAIV-HATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVS-EADDRY 194 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEE-ECSSSE
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhee-cccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeee-ccCCce
Confidence 999999999999999999999999999999999 999887 7888889999999999999999998877654 344667
Q ss_pred EEeeeCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccc-------------------------
Q psy5549 191 ICTIVFPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHS------------------------- 245 (331)
Q Consensus 191 ~C~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~------------------------- 245 (331)
.|...+..... ...+.....++.+++|+++++++|.+|++.++++.++....
T Consensus 195 ~C~~~~~~~~~---~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (502)
T 3odu_A 195 ICDRFYPNDLW---VVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGH 271 (502)
T ss_dssp EEEECCSSHHH---HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEEEETTE
T ss_pred EEeecCCchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccccCCCcccccccccc
Confidence 79876654332 55666777788899999999999999999999876542000
Q ss_pred --------------------------------------------------------------------------------
Q psy5549 246 -------------------------------------------------------------------------------- 245 (331)
Q Consensus 246 -------------------------------------------------------------------------------- 245 (331)
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (502)
T 3odu_A 272 LLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGV 351 (502)
T ss_dssp EEECSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcCccccccchhhhcccCcchhhhhhccccccchhhcccccccccccCccccccccCCCCCCcchhhhhhhhhchhhc
Confidence
Q ss_pred ------------------------------------------------cccchhhhhhhHHHHHHHHHHHHHHhhhhHHH
Q psy5549 246 ------------------------------------------------HLSSHHARHTRVMRMLCISVCVILAMWLPIFL 277 (331)
Q Consensus 246 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i 277 (331)
...++.++++|+++++++++++|++||+|+.+
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw~P~~i 431 (502)
T 3odu_A 352 AGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYI 431 (502)
T ss_dssp HTCHHHHHHHHHTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCccccchhhhchhhhhccccccccccccCcchhhhccccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 00022356899999999999999999999999
Q ss_pred HHHHHHhcCCCCCC--chhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 278 TMILIYIDGRRPTA--DTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 278 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
..++..+....... .........+..++.++.++|+++||+||++++++||+++
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~ 487 (502)
T 3odu_A 432 GISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSA 487 (502)
T ss_dssp HHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCH
T ss_pred HHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHH
Confidence 99988764222111 1111212245668889999999999999999999999974
No 7
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=2.9e-43 Score=297.44 Aligned_cols=279 Identities=23% Similarity=0.384 Sum_probs=227.9
Q ss_pred chhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHhHhhhhhhhhccCCCCchhhhhhhh
Q psy5549 39 REFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCLSIPGIMYARVSPQWPLGDVLCKIM 118 (331)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~~~p~~~~~~~~~~~~~~~~~C~~~ 118 (331)
++..+.+..+++.+++++|++||++++.++.++|++|+++|+++.|||++|++.++..|....... .+|..++..|+..
T Consensus 7 ~~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~~p~~~~~~~-~~~~~~~~~c~~~ 85 (296)
T 2lnl_A 7 ETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKV-NGWIFGTFLCKVV 85 (296)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHH-SSSCCSSHHHHHH
T ss_pred cchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHhhhHHHhhcc-CCCccchhHHHHH
Confidence 345567788899999999999999999999999999999999999999999999887777766554 4689999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc-cchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccceeEEeeeCC
Q psy5549 119 PYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK-LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRLICTIVFP 197 (331)
Q Consensus 119 ~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 197 (331)
.++...+..+|.+++++||+|||+||+ +|.+++ ..+++...+++++|+.+++.+.|..........+.....|.....
T Consensus 86 ~~~~~~~~~~s~~~l~~isidRy~aI~-~P~~~~~~~~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 164 (296)
T 2lnl_A 86 SLLKEVNFYSGILLLACISVDRYLAIV-HATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLG 164 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSS-SCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCS
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhhhhh-hccccchhhhhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeecc
Confidence 999999999999999999999999999 999988 556677788889999999999999988776654444444433222
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccccccchhhhhhhHHHHHHHHHHHHHHhhhhHHH
Q psy5549 198 NVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHSHLSSHHARHTRVMRMLCISVCVILAMWLPIFL 277 (331)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i 277 (331)
.... .....+......+.+++|+.++..+|.++.++++++++ ++++|.+|++..++++|++||+|+.+
T Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~~-----------~~~~k~~~~~~~v~~~f~icw~P~~i 232 (296)
T 2lnl_A 165 NDTA-KWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHM-----------GQKHRAMRVIFAVVLIFLLCWLPYNL 232 (296)
T ss_dssp CCTT-TTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCCC-----------HHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------hhhhhHHHHHHHhhhheeeeehHHHH
Confidence 2211 22556667777888999999999999998876665544 66789999999999999999999999
Q ss_pred HHHHHHhcCCCCCCch--hhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 278 TMILIYIDGRRPTADT--EFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 278 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
..++............ ..........++..+.++||++||+||+++|+||||++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~ 288 (296)
T 2lnl_A 233 VLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGF 288 (296)
T ss_dssp HHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHH
T ss_pred HHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 9999888765544322 11111135667888999999999999999999999974
No 8
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=3.6e-43 Score=315.31 Aligned_cols=277 Identities=22% Similarity=0.373 Sum_probs=235.1
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-HhhhhhhhhccCCCCchhhhhhhh
Q psy5549 40 EFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-SIPGIMYARVSPQWPLGDVLCKIM 118 (331)
Q Consensus 40 ~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~~~~~~~~~~C~~~ 118 (331)
.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++ ..|..+.....+.|.++...|++.
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 99 (467)
T 3uon_A 20 TFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLW 99 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHH
Confidence 3456788889999999999999999999999999999999999999999999988 999999888888999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheecee--eccceeEEee
Q psy5549 119 PYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQE--VLESRLICTI 194 (331)
Q Consensus 119 ~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~--~~~~~~~C~~ 194 (331)
.++..++..++.+++++||+|||++|+ +|++|+ .+++++..+++++|++++++++|.++.+.... ...+...|..
T Consensus 100 ~~~~~~~~~~s~~~l~~isidRy~ai~-~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 178 (467)
T 3uon_A 100 LALDYVVSNASVMNLLIISFDRYFCVT-KPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYI 178 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-CTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-cccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCccee
Confidence 999999999999999999999999999 999887 79999999999999999999999888765432 2234445765
Q ss_pred eCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccc-----------------------------
Q psy5549 195 VFPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHS----------------------------- 245 (331)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~----------------------------- 245 (331)
.+.. ...+.....++.+++|+++++++|.+|++.++++.++.+..
T Consensus 179 ~~~~------~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (467)
T 3uon_A 179 QFFS------NAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKS 252 (467)
T ss_dssp GGGG------SHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCC
T ss_pred ecCc------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccC
Confidence 5432 44577778888899999999999999999999886522100
Q ss_pred --------------------------------------------------------------------------------
Q psy5549 246 -------------------------------------------------------------------------------- 245 (331)
Q Consensus 246 -------------------------------------------------------------------------------- 245 (331)
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (467)
T 3uon_A 253 PSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTN 332 (467)
T ss_dssp SSHHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHH
T ss_pred CcccccccccccccccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCcccc
Confidence
Q ss_pred ------------------------------------------cccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q psy5549 246 ------------------------------------------HLSSHHARHTRVMRMLCISVCVILAMWLPIFLTMILIY 283 (331)
Q Consensus 246 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~ 283 (331)
.+.++.++++|++|++++++++|++||+|+.+..++..
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~ 412 (467)
T 3uon_A 333 SLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINT 412 (467)
T ss_dssp HHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhcCccccccccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 00001146899999999999999999999999999998
Q ss_pred hcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 284 IDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
+...... . ....+..++.++|+++||+||++++++|||++
T Consensus 413 ~~~~~~~-~-------~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~ 452 (467)
T 3uon_A 413 FCAPCIP-N-------TVWTIGYWLCYINSTINPACYALCNATFKKTF 452 (467)
T ss_dssp HCSTTSC-H-------HHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHH
T ss_pred HHhcccc-h-------HHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHH
Confidence 8764322 2 37788999999999999999999999999874
No 9
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=3e-43 Score=316.97 Aligned_cols=271 Identities=23% Similarity=0.385 Sum_probs=225.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-Hhhhhhhhhcc-CCCCchhhhhhhh
Q psy5549 41 FEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-SIPGIMYARVS-PQWPLGDVLCKIM 118 (331)
Q Consensus 41 ~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~-~~~~~~~~~C~~~ 118 (331)
....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++ .+|..+..... +.|.++...|++.
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~ 115 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVF 115 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhH
Confidence 445667788999999999999999999999999999999999999999999988 88988877665 5799999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCccC-----ccchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccceeEEe
Q psy5549 119 PYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRS-----KLTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRLICT 193 (331)
Q Consensus 119 ~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~-----~~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~ 193 (331)
.++..++..++.+++++||+|||++|+ +|++| +.+++++..+++++|++++++++|.++.+.. ..+...|.
T Consensus 116 ~~~~~~~~~~s~~~l~~is~dRy~aI~-~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~---~~~~~~C~ 191 (481)
T 3pbl_A 116 VTLDVMMCTASIWNLCAISIDRYTAVV-MPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNT---TGDPTVCS 191 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-SHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCC---CSSTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecc---cCCCCccc
Confidence 999999999999999999999999999 99887 2788899999999999999999998887654 23444565
Q ss_pred eeCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhcccc---------------------------
Q psy5549 194 IVFPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHSH--------------------------- 246 (331)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~--------------------------- 246 (331)
.. ...+.....++.+++|+++++++|.+|++.+++++++.....
T Consensus 192 ~~---------~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (481)
T 3pbl_A 192 IS---------NPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLL 262 (481)
T ss_dssp CC---------CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEETTTEEE
T ss_pred cc---------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCcccceeecccccc
Confidence 43 344667778888999999999999999999998766420000
Q ss_pred --------------------------------------------------------------------------------
Q psy5549 247 -------------------------------------------------------------------------------- 246 (331)
Q Consensus 247 -------------------------------------------------------------------------------- 246 (331)
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (481)
T 3pbl_A 263 TKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAG 342 (481)
T ss_dssp ESSSCHHHHHHHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCcccccCCCcccchhccCCCceeccCCchhcccCCcccccccccccCccCccccccccccchhccccccccCCCCCCC
Confidence
Q ss_pred ----------------------------------------------ccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHH
Q psy5549 247 ----------------------------------------------LSSHHARHTRVMRMLCISVCVILAMWLPIFLTMI 280 (331)
Q Consensus 247 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~ 280 (331)
..+..++++|++|++++++++|++||+|+.+..+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~ 422 (481)
T 3pbl_A 343 FTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHV 422 (481)
T ss_dssp CHHHHHHHHTTCHHHHHHHHHTSHHHHHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhccccccccchhhhccccccCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 0001125899999999999999999999999999
Q ss_pred HHHhcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 281 LIYIDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
+........... .+..+..++.++|+++||+||++++++||+++
T Consensus 423 ~~~~~~~~~~~~-------~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~ 466 (481)
T 3pbl_A 423 LNTHCQTCHVSP-------ELYSATTWLGYVNSALNPVIYTTFNIEFRKAF 466 (481)
T ss_dssp HHHSCSSCCCCH-------HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHhccccccCcH-------HHHHHHHHHHHHhhccchHHHHHcCHHHHHHH
Confidence 988766544433 37788999999999999999999999999874
No 10
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=6e-43 Score=313.57 Aligned_cols=285 Identities=21% Similarity=0.410 Sum_probs=237.8
Q ss_pred chhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHhHhhhhhhhhccCCCCchhhhhhhh
Q psy5549 39 REFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCLSIPGIMYARVSPQWPLGDVLCKIM 118 (331)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~~~p~~~~~~~~~~~~~~~~~C~~~ 118 (331)
+.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++.+|..+.....++|.++...|++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~p~~~~~~~~~~~~~~~~~C~~~ 92 (464)
T 4dkl_A 13 SMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGNILCKIV 92 (464)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCSHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhH
Confidence 34556788899999999999999999999999999999999999999999999888889888888888999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccceeEEeeeC
Q psy5549 119 PYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRLICTIVF 196 (331)
Q Consensus 119 ~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 196 (331)
.++..++..++.+++++||+|||++|+ +|++|+ .+++++..+++++|++++++++|.++..... ...+...|...+
T Consensus 93 ~~~~~~~~~~s~~~l~~is~dRy~aI~-~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~-~~~~~~~c~~~~ 170 (464)
T 4dkl_A 93 ISIDYYNMFTSIFTLCTMSVDRYIAVC-HPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTK-YRQGSIDCTLTF 170 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCE-EETTEEECCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeec-ccCCCceEEeec
Confidence 999999999999999999999999999 999987 7999999999999999999999988765543 455667787766
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccc-------------------------------
Q psy5549 197 PNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHS------------------------------- 245 (331)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~------------------------------- 245 (331)
...+. .....+.....++.+++|+++++++|.+|++.+++++++.+..
T Consensus 171 ~~~~~-~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (464)
T 4dkl_A 171 SHPTW-YWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPS 249 (464)
T ss_dssp SSSHH-HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSC
T ss_pred CCcch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCCCc
Confidence 54432 1134466677778889999999999999999998776621000
Q ss_pred --------------------------------------------------------------------------------
Q psy5549 246 -------------------------------------------------------------------------------- 245 (331)
Q Consensus 246 -------------------------------------------------------------------------------- 245 (331)
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (464)
T 4dkl_A 250 LNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSL 329 (464)
T ss_dssp SHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHHHH
T ss_pred cccccccccccccccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCCcccccccc
Confidence
Q ss_pred ----------------------------------------cccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHhc
Q psy5549 246 ----------------------------------------HLSSHHARHTRVMRMLCISVCVILAMWLPIFLTMILIYID 285 (331)
Q Consensus 246 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~~~ 285 (331)
...++.++++|++|++++++++|++||+|+.+..++..+.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~ 409 (464)
T 4dkl_A 330 RMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALI 409 (464)
T ss_dssp HHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cchhhcccchhhcccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 0112236678999999999999999999999999998876
Q ss_pred CCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 286 GRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
........ . ....++.++.++|+++||+||++++++||++|
T Consensus 410 ~~~~~~~~--~---~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~ 450 (464)
T 4dkl_A 410 TIPETTFQ--T---VSWHFCIALGYTNSCLNPVLYAFLDENFKRCF 450 (464)
T ss_dssp CCCCCHHH--H---HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred cCCccccc--h---hHHHHHHHHHHhhhchhHHHHHHhhHHHHHHH
Confidence 54332221 1 35677888999999999999999999999974
No 11
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=2.8e-42 Score=307.95 Aligned_cols=286 Identities=18% Similarity=0.296 Sum_probs=238.4
Q ss_pred cCCchhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-H-hhhhhhhhccCCCCchhh
Q psy5549 36 FGNREFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-S-IPGIMYARVSPQWPLGDV 113 (331)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~-~p~~~~~~~~~~~~~~~~ 113 (331)
+........+..+++.+++++|++||+++++++.++|++|++.+++++|||++|++.++ . +|..+.....++|.++..
T Consensus 27 ~~~~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~ 106 (448)
T 2z73_A 27 DQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFA 106 (448)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHH
Confidence 34455567778889999999999999999999999999999999999999999999988 3 788888777888999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccceeE
Q psy5549 114 LCKIMPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRLI 191 (331)
Q Consensus 114 ~C~~~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (331)
.|++..++..++..+|.+++++||+|||++|+ +|++++ .+++++..+++++|+++++++++.++.+.....+.....
T Consensus 107 ~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~-~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~ 185 (448)
T 2z73_A 107 ACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG-RPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCN 185 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCcee
Confidence 99999999999999999999999999999999 888876 899999999999999999999998888776655566667
Q ss_pred EeeeCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccc----c------ccchhhhhhhHHHHH
Q psy5549 192 CTIVFPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHS----H------LSSHHARHTRVMRML 261 (331)
Q Consensus 192 C~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~ 261 (331)
|..++...+. ....+.....++.+++|+++++++|.+|.++++|+.++..+. + ..+..++++|.+|++
T Consensus 186 c~~~~~~~~~--~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l 263 (448)
T 2z73_A 186 CSFDYISRDS--TTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKIS 263 (448)
T ss_dssp EEECCSCCSH--HHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred EecccccCCc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHH
Confidence 8877654432 144556666777789999999999999999998876643211 1 011124588999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 262 CISVCVILAMWLPIFLTMILIYIDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 262 ~~~~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
++++++|++||+|+.+..++........... ....+..++..+|+++||+||++++++|||++
T Consensus 264 ~~iv~~F~i~~~P~~i~~~~~~~~~~~~~~~-------~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~ 326 (448)
T 2z73_A 264 IVIVSQFLLSWSPYAVVALLAQFGPLEWVTP-------YAAQLPVMFAKASAIHNPMIYSVSHPKFREAI 326 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGCCH-------HHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCcccCCh-------HHHHHHHHHHHHHHhhcchHHHHhhHHHHHHH
Confidence 9999999999999999999887764332222 35677888999999999999999999999863
No 12
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=6.6e-42 Score=304.17 Aligned_cols=283 Identities=21% Similarity=0.349 Sum_probs=233.1
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHhHhhhhhhhhccCCCCchhhhhhh
Q psy5549 38 NREFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCLSIPGIMYARVSPQWPLGDVLCKI 117 (331)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~~~p~~~~~~~~~~~~~~~~~C~~ 117 (331)
.+...+.+...++.+++++|++||+++++++.+++++|++.+++++|||++|++.++..|..+.....+.|..+...|++
T Consensus 120 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~~~~p~~~~~~~~~~~~~~~~~C~~ 199 (434)
T 4ea3_A 120 LPLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKT 199 (434)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCcCcccHHHH
Confidence 35666778888999999999999999999999999999999999999999999986688998888888889999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccceeEEeee
Q psy5549 118 MPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRLICTIV 195 (331)
Q Consensus 118 ~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 195 (331)
..++..++..++.+++++||+|||++|+ +|++++ .+++++..+++++|++++++++|..+..... .......|...
T Consensus 200 ~~~~~~~~~~~S~~~l~~isidRy~aI~-~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~-~~~~~~~c~~~ 277 (434)
T 4ea3_A 200 VIAIDYYNMFTSTFTLTAMSVDRYVAIC-HPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQ-VEDEEIECLVE 277 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-CC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEEC-CCSSCCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhEEE-cccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeE-eecCceeEEEe
Confidence 9999999999999999999999999999 998887 8999999999999999999999887765433 44456678876
Q ss_pred CCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccccccchhhhhhhHHHHHHHHHHHHHHhhhhH
Q psy5549 196 FPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHSHLSSHHARHTRVMRMLCISVCVILAMWLPI 275 (331)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~ 275 (331)
....+. .....+.....++.+++|+++++++|.+|.+++|+++++ .+..+++++++|.++++++++++|++||+|+
T Consensus 278 ~~~~~~-~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~ 353 (434)
T 4ea3_A 278 IPTPQD-YWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLL---SGSREKDRNLRRITRLVLVVVAVFVGCWTPV 353 (434)
T ss_dssp CCSSHH-HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSC---SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---ccchhhHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 654432 113456677788889999999999999999999887653 2333444778999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 276 FLTMILIYIDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 276 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
.+..++............ . ....+...+.++|+++||+||++++++||+++
T Consensus 354 ~i~~~~~~~~~~~~~~~~-~----~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~ 404 (434)
T 4ea3_A 354 QVFVLAQGLGVQPSSETA-V----AILRFCTALGYVNSCLNPILYAFLDENFKACF 404 (434)
T ss_dssp HHHHHHHHTTCCCCSHHH-H----HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHhccCCchHHH-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988876544332211 1 25566777899999999999999999999863
No 13
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=7.9e-42 Score=310.13 Aligned_cols=276 Identities=18% Similarity=0.303 Sum_probs=220.5
Q ss_pred CchhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-HhhhhhhhhccCCCCchhhhhh
Q psy5549 38 NREFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-SIPGIMYARVSPQWPLGDVLCK 116 (331)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~~~~~~~~~~C~ 116 (331)
.+.....+..+++.+++++|++||+++++++.+++++|++.|++++|||++|++.++ ..|..+.. ....|..+...|+
T Consensus 58 ~~~~~~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~ 136 (520)
T 3v2y_A 58 DKENSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWF 136 (520)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccc
Confidence 344444788899999999999999999999999999999999999999999999999 77776665 4567888999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccceeEEee
Q psy5549 117 IMPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRLICTI 194 (331)
Q Consensus 117 ~~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 194 (331)
+..++..++..+|++++++||+|||+||+ |++|+ .+++++..+++++|++++++++|+++++... .+...|..
T Consensus 137 ~~~~~~~~~~~~S~~~l~~isidRy~aI~--p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~---~~~~~C~~ 211 (520)
T 3v2y_A 137 LREGSMFVALSASVFSLLAIAIERYITML--KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI---SALSSCST 211 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT---TCGGGBCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhEEe--ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc---cCCCcccc
Confidence 99999999999999999999999999999 55555 8999999999999999999999998887754 34457876
Q ss_pred eCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhh----------c--------------c------
Q psy5549 195 VFPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKW----------E--------------H------ 244 (331)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~----------~--------------~------ 244 (331)
.++.. ...+. ...++.+++|+++++++|.+|++.+++++... + .
T Consensus 212 ~~~~~-----~~~~~-~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~~~~~~~ 285 (520)
T 3v2y_A 212 VLPLY-----HKHYI-LFCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSP 285 (520)
T ss_dssp SSTTB-----BHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTEECCSSS
T ss_pred cCCcc-----chHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEeccccccccc
Confidence 65422 23333 34455689999999999999999998875000 0 0
Q ss_pred --------------------------------------------------------------------------------
Q psy5549 245 -------------------------------------------------------------------------------- 244 (331)
Q Consensus 245 -------------------------------------------------------------------------------- 244 (331)
T Consensus 286 ~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 365 (520)
T 3v2y_A 286 SLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNS 365 (520)
T ss_dssp CHHHHHHHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHHHTCHHH
T ss_pred ccccccchhhhHHHHhcCCcccHHHhhhHHHhccccccccccccccCCCcCCccchhhhHHHHHHHHccCCCcccccccc
Confidence
Q ss_pred -----------------------c------------------cccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q psy5549 245 -----------------------S------------------HLSSHHARHTRVMRMLCISVCVILAMWLPIFLTMILIY 283 (331)
Q Consensus 245 -----------------------~------------------~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~ 283 (331)
+ ...++.++++|+++++++++++|++||+|+.+..++..
T Consensus 366 ~~~~~~~~~~~~~~~~~~s~~~~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~ 445 (520)
T 3v2y_A 366 LRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDV 445 (520)
T ss_dssp HHHHHTTCHHHHHHHHHHSHHHHHSHHHHHHHHHHHHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhHhhhhhccchhhhcccchhhHHHHhhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00001125889999999999999999999999999988
Q ss_pred hcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 284 IDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
+......... ....+..++.++|+++||+||++++++||+++
T Consensus 446 ~~~~~~~~~~------~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~ 487 (520)
T 3v2y_A 446 GCKVKTCDIL------FRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAF 487 (520)
T ss_dssp TSCTTTCSTT------TSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHH
T ss_pred HcccccccHH------HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 7654332222 25567788999999999999999999999864
No 14
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=2.3e-42 Score=308.87 Aligned_cols=275 Identities=22% Similarity=0.440 Sum_probs=228.0
Q ss_pred hHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-HhhhhhhhhccCCCCchhhhhhhhhh
Q psy5549 42 EMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-SIPGIMYARVSPQWPLGDVLCKIMPY 120 (331)
Q Consensus 42 ~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~~~~~~~~~~C~~~~~ 120 (331)
...+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++ .+|..+.....++|.++...|++..+
T Consensus 7 ~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 86 (452)
T 3rze_A 7 QLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLS 86 (452)
T ss_dssp --CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHH
Confidence 34567788999999999999999999999999999999999999999999988 99999999888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheeceee--ccceeEEeeeC
Q psy5549 121 SQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEV--LESRLICTIVF 196 (331)
Q Consensus 121 ~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~--~~~~~~C~~~~ 196 (331)
+..++..++.+++++||+|||++|+ +|++|+ .+++++..+++++|++++++++|.+........ ......|..++
T Consensus 87 ~~~~~~~~s~~~l~~is~dRy~aI~-~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~ 165 (452)
T 3rze_A 87 MDYVASTASIFSVFILCIDRYRSVQ-QPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDF 165 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-CSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhee-CccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeecCCC
Confidence 9999999999999999999999999 999887 799999999999999999999886544332211 12344565443
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccc-------------------------------
Q psy5549 197 PNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHS------------------------------- 245 (331)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~------------------------------- 245 (331)
.. ...+.....++.+++|+++++++|.+|++.++++.++.+..
T Consensus 166 ~~------~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (452)
T 3rze_A 166 YD------VTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPS 239 (452)
T ss_dssp TT------CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSS
T ss_pred cc------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCC
Confidence 32 44577777888899999999999999999998875431000
Q ss_pred --------------------------------------------------------------------------------
Q psy5549 246 -------------------------------------------------------------------------------- 245 (331)
Q Consensus 246 -------------------------------------------------------------------------------- 245 (331)
T Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (452)
T 3rze_A 240 LNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSL 319 (452)
T ss_dssp HHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHH
T ss_pred CCcccccccCCCCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCc
Confidence
Q ss_pred ----------------------------------------cccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHhc
Q psy5549 246 ----------------------------------------HLSSHHARHTRVMRMLCISVCVILAMWLPIFLTMILIYID 285 (331)
Q Consensus 246 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~~~ 285 (331)
...++.++++|+++++++++++|++||+|+.+..++....
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~ 399 (452)
T 3rze_A 320 RMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFC 399 (452)
T ss_dssp HHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhcCCccccccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 0001224789999999999999999999999999998886
Q ss_pred CCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 286 GRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
...... ....+..++.++|+++||+||++++++||+++
T Consensus 400 ~~~~~~--------~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~ 437 (452)
T 3rze_A 400 KNCCNE--------HLHMFTIWLGYINSTLNPLIYPLCNENFKKTF 437 (452)
T ss_dssp SCCSCT--------TTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred cccccH--------HHHHHHHHHHHHHhcccchhhhhccHHHHHHH
Confidence 654432 25678899999999999999999999999874
No 15
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=5.4e-43 Score=298.09 Aligned_cols=282 Identities=22% Similarity=0.361 Sum_probs=231.1
Q ss_pred chhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-HhhhhhhhhccCCCCchhhhhhh
Q psy5549 39 REFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-SIPGIMYARVSPQWPLGDVLCKI 117 (331)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~~~~~~~~~~C~~ 117 (331)
++........++.+++++|++||++++.++.+++++|++.+++++|||++|++.++ ..|..+.....++|.+++..|++
T Consensus 7 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 86 (315)
T 4amj_A 7 SQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCEL 86 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHH
Confidence 34455778889999999999999999999999999999999999999999999988 88998888888899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccceeEEeee
Q psy5549 118 MPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRLICTIV 195 (331)
Q Consensus 118 ~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 195 (331)
..++...+..+|.+++++||+|||++|+ +|.+++ .+++++..+++++|+.+++.+.|+.........+.+...|..+
T Consensus 87 ~~~~~~~~~~~S~~~l~~isidRy~aI~-~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 165 (315)
T 4amj_A 87 WTSLDVLCVTASIETLCVIAIDRYLAIT-SPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQD 165 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc-cccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccc
Confidence 9999999999999999999999999999 999887 8999999999999999999998877765444344444456544
Q ss_pred CCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccccc----cchhhhhhhHHHHHHHHHHHHHHh
Q psy5549 196 FPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHSHL----SSHHARHTRVMRMLCISVCVILAM 271 (331)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~f~i~ 271 (331)
....+. .....+.....++.+++|+++++++|.++.+.++++.++.++.++ ++..++++|.+++++.++++|++|
T Consensus 166 ~~~~~~-~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~ 244 (315)
T 4amj_A 166 PGCCDF-VTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLC 244 (315)
T ss_dssp TTCCCC-CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchh-hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 332221 115567777777788999999999999999999988775432222 222357889999999999999999
Q ss_pred hhhHHHHHHHHHhcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 272 WLPIFLTMILIYIDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 272 ~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
|+|+.+..++......... . ....+...+.++|+++||++|+ ++++|||++
T Consensus 245 ~~P~~i~~~~~~~~~~~~~-~-------~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~ 295 (315)
T 4amj_A 245 WLPFFLVNIVNVFNRDLVP-D-------WLFVAFNWLGYANSAMNPIIYC-RSPDFRKAF 295 (315)
T ss_dssp HHHHHHHHHHHHHCTTSSC-H-------HHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccch-H-------HHHHHHHHHHHHhccccHHHHc-CcHHHHHHH
Confidence 9999999999887654332 2 2667788899999999999999 999999863
No 16
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=5.9e-42 Score=309.03 Aligned_cols=284 Identities=22% Similarity=0.259 Sum_probs=228.5
Q ss_pred chhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-HhhhhhhhhccCCCCchhhhhhh
Q psy5549 39 REFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-SIPGIMYARVSPQWPLGDVLCKI 117 (331)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~~~~~~~~~~C~~ 117 (331)
+.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++ .+|..+.... .|..+...|++
T Consensus 17 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~ 94 (488)
T 3eml_A 17 PIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLF 94 (488)
T ss_dssp -CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHH
Confidence 33445678889999999999999999999999999999999999999999999988 8888776443 67789999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccc----eeE
Q psy5549 118 MPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLES----RLI 191 (331)
Q Consensus 118 ~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~----~~~ 191 (331)
..++..++..++.+++++||+|||++|+ +|++|+ .+++++..+++++|++++++++|+++++........ ...
T Consensus 95 ~~~~~~~~~~~s~~~l~~is~dRy~aI~-~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (488)
T 3eml_A 95 IACFVLVLTQSSIFSLLAIAIDRYIAIR-IPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQG 173 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS-CGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhheeEe-cccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccc
Confidence 9999999999999999999999999999 999877 899999999999999999999999987765543222 223
Q ss_pred EeeeCCCC--CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccc------------------------
Q psy5549 192 CTIVFPNV--PTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHS------------------------ 245 (331)
Q Consensus 192 C~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~------------------------ 245 (331)
|...+... ........+.....++.+++|+++++++|.+|++.++++.++.+..
T Consensus 174 c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (488)
T 3eml_A 174 CGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGH 253 (488)
T ss_dssp SCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETTE
T ss_pred cccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceeccccc
Confidence 33222110 0000133345556778889999999999999999999886542110
Q ss_pred --------------------------------------------------------------------------------
Q psy5549 246 -------------------------------------------------------------------------------- 245 (331)
Q Consensus 246 -------------------------------------------------------------------------------- 245 (331)
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (488)
T 3eml_A 254 LLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGV 333 (488)
T ss_dssp EEESSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHHH
T ss_pred cCCCCccccccccccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCCc
Confidence
Q ss_pred ------------------------------------------------cccchhhhhhhHHHHHHHHHHHHHHhhhhHHH
Q psy5549 246 ------------------------------------------------HLSSHHARHTRVMRMLCISVCVILAMWLPIFL 277 (331)
Q Consensus 246 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i 277 (331)
...++.++++|+++++++++++|++||+|+.+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~i 413 (488)
T 3eml_A 334 AGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHI 413 (488)
T ss_dssp TTCHHHHHHHHTTCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcchhhhhccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 00111367899999999999999999999999
Q ss_pred HHHHHHhcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 278 TMILIYIDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
+.++..+......... .+..+..++.++|+++||+||++++++||+++
T Consensus 414 ~~~~~~~~~~~~~~~~------~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~ 461 (488)
T 3eml_A 414 INCFTFFCPDCSHAPL------WLMYLAIVLSHTNSVVNPFIYAYRIREFRQTF 461 (488)
T ss_dssp HHHHHHHCTTSCCCCH------HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHhccCccccccH------HHHHHHHHHHHHHhhhchhhhhhcCHHHHHHH
Confidence 9999988765444333 46778999999999999999999999999864
No 17
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=2.1e-42 Score=308.59 Aligned_cols=286 Identities=22% Similarity=0.259 Sum_probs=227.2
Q ss_pred CCchhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-HhhhhhhhhccCCCCchhhhh
Q psy5549 37 GNREFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-SIPGIMYARVSPQWPLGDVLC 115 (331)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~~~~~~~~~~C 115 (331)
..+.....+..+++.+++++|++||+++++++.+++++|++.+++++|||++|++.++ .+|..+... ..|..+...|
T Consensus 25 ~~~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C 102 (447)
T 4eiy_A 25 APPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGC 102 (447)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHH
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHH
Confidence 3455666788899999999999999999999999999999999999999999999988 888877643 3677789999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccc----e
Q psy5549 116 KIMPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLES----R 189 (331)
Q Consensus 116 ~~~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~----~ 189 (331)
++..++..++..+|.+++++||+|||++|+ +|++|+ .+++++..+++++|++++++++|+.+++........ .
T Consensus 103 ~~~~~~~~~~~~~S~~~l~~is~dRy~aI~-~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~ 181 (447)
T 4eiy_A 103 LFIACFVLVLTQSSIFSLLAIAIDRYIAIR-IPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHS 181 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHeEEe-cccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCcccccc
Confidence 999999999999999999999999999999 999877 899999999999999999999999887665432111 1
Q ss_pred eEEeeeCCCC--CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhcc-----------------------
Q psy5549 190 LICTIVFPNV--PTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEH----------------------- 244 (331)
Q Consensus 190 ~~C~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~----------------------- 244 (331)
..|....... ........+.....++.+++|+++++++|.+|++.+|++.++...
T Consensus 182 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (447)
T 4eiy_A 182 QGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKD 261 (447)
T ss_dssp TTCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHH
T ss_pred ccccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhc
Confidence 1232211100 000002333333445567899999999999999999987553211
Q ss_pred ------------------------------------------------------------------------------cc
Q psy5549 245 ------------------------------------------------------------------------------SH 246 (331)
Q Consensus 245 ------------------------------------------------------------------------------~~ 246 (331)
..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (447)
T 4eiy_A 262 ALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLER 341 (447)
T ss_dssp HHHHHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHH
T ss_pred cchhhhccCCCCCCCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccc
Confidence 01
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccc
Q psy5549 247 LSSHHARHTRVMRMLCISVCVILAMWLPIFLTMILIYIDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHF 326 (331)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~ 326 (331)
..++.++++|++|++++++++|++||+|+.+..++............ .+..+..++.++|+++||+||++++++
T Consensus 342 ~~~~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~------~~~~~~~~l~~~ns~~NPiIY~~~~~~ 415 (447)
T 4eiy_A 342 ARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPL------WLMYLAIVLSHTNSVVNPFIYAYRIRE 415 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCH------HHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred hhHHHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccch------HHHHHHHHHHHHHhccchhhhHhccHH
Confidence 11223678899999999999999999999999999888765433333 467889999999999999999999999
Q ss_pred cccCC
Q psy5549 327 ISYTF 331 (331)
Q Consensus 327 fR~~~ 331 (331)
||+++
T Consensus 416 fR~~~ 420 (447)
T 4eiy_A 416 FRQTF 420 (447)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=9.6e-41 Score=302.87 Aligned_cols=282 Identities=21% Similarity=0.384 Sum_probs=227.4
Q ss_pred chhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCCCchhhHHHHHHHHHHHHHHh-HhhhhhhhhccCCCCchhhhhhh
Q psy5549 39 REFEMSAEICLLSIIFILSMGANLFVLITVMWYPALQTVTNYFLLNLTAADILFCL-SIPGIMYARVSPQWPLGDVLCKI 117 (331)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~~~~~~~~i~~lai~Dll~~~-~~p~~~~~~~~~~~~~~~~~C~~ 117 (331)
++......++++.+++++|++||+++++++.+++++|++.+++++|||++|++.++ .+|..+.....+.|.++...|++
T Consensus 178 ~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 257 (514)
T 3sn6_R 178 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEF 257 (514)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhh
Confidence 34455678889999999999999999999999999999999999999999999998 89999888888899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCccCc--cchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccceeEEeee
Q psy5549 118 MPYSQFVCGFVLLWTLTLISMDRYFCIVVPPYRSK--LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRLICTIV 195 (331)
Q Consensus 118 ~~~~~~~~~~~s~~~~~~isidR~~ai~~~p~~~~--~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 195 (331)
..++..++..+|.+++++||+|||++|+ +|++++ .+++++..+++++|++++++++++...........+...|...
T Consensus 258 ~~~l~~~~~~~S~~~l~~isidRy~aI~-~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~ 336 (514)
T 3sn6_R 258 WTSIDVLCVTASIETLCVIAVDRYFAIT-SPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAE 336 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-SHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeec
Confidence 9999999999999999999999999999 999888 8999999999999999999986665433222222233334332
Q ss_pred CCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccc-----------------------cccchhh
Q psy5549 196 FPNVPTVSVSTAFTVVMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHS-----------------------HLSSHHA 252 (331)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~ 252 (331)
....+. .....+.....++.+++|+++++++|.+|++.+|++.++.... ...+..+
T Consensus 337 ~~~~~~-~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (514)
T 3sn6_R 337 ETCCDF-FTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCL 415 (514)
T ss_dssp SSCCCC-CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CH
T ss_pred cccccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhH
Confidence 211111 1156677788888899999999999999999998876643211 1112225
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCCCCchhhhhhhhhhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 253 RHTRVMRMLCISVCVILAMWLPIFLTMILIYIDGRRPTADTEFFLRSHHFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 253 ~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
+++|.++++++++++|++||+|+.+..++......... . ....+..++.++|+++||+||+ ++++||+++
T Consensus 416 ~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~-~-------~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~ 485 (514)
T 3sn6_R 416 KEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIR-K-------EVYILLNWIGYVNSGFNPLIYC-RSPDFRIAF 485 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSC-H-------HHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc-h-------HHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHH
Confidence 68899999999999999999999999998877543222 2 2667888999999999999999 999999863
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.19 E-value=1.4e-07 Score=52.66 Aligned_cols=31 Identities=29% Similarity=0.462 Sum_probs=27.2
Q ss_pred hhHHHHHHHhhhccccceeheeeccccccCC
Q psy5549 301 HFLWPLLLALANTVVNPTLIIRRHHFISYTF 331 (331)
Q Consensus 301 ~~~~~~~l~~~~~~~nP~iy~~~~~~fR~~~ 331 (331)
...++.++.++||++||+||++.+++||+++
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~ 32 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAF 32 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 3467788999999999999999999999863
No 20
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.15 E-value=4.4e-07 Score=47.72 Aligned_cols=24 Identities=29% Similarity=0.441 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhhhhhccCCccCc
Q psy5549 128 VLLWTLTLISMDRYFCIVVPPYRSK 152 (331)
Q Consensus 128 ~s~~~~~~isidR~~ai~~~p~~~~ 152 (331)
+|.+++++||+|||++|+ +|++++
T Consensus 2 ~Si~~L~~is~dRy~aI~-~Pl~~~ 25 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSIT-QAIEYN 25 (32)
T ss_dssp HHHHHHHHHHTHHHHHHH-HHHGGG
T ss_pred cHHHHHHHHHHHHHHHhh-hhhhcc
Confidence 588999999999999999 888876
No 21
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.97 E-value=6.3e-07 Score=47.36 Aligned_cols=29 Identities=24% Similarity=0.565 Sum_probs=25.0
Q ss_pred hhhHHHHHHHHHHHHHHhhhhHHHHHHHH
Q psy5549 254 HTRVMRMLCISVCVILAMWLPIFLTMILI 282 (331)
Q Consensus 254 ~~~~~~~~~~~~~~f~i~~~P~~i~~~~~ 282 (331)
|+|.+|++.+++++|.+||+|+++..++.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 45788999999999999999999977654
No 22
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.64 E-value=8.3e-05 Score=45.11 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=28.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcceeeeeeeecCCC
Q psy5549 40 EFEMSAEICLLSIIFILSMGANLFVLITVMWYPAL 74 (331)
Q Consensus 40 ~~~~~~~~~~~~~~~~~g~~~N~~vi~~i~~~~~~ 74 (331)
.... +...+|.+++++|++||+++++++.++|.-
T Consensus 26 ~~~~-~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 26 SSGA-LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp HHCS-SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred hHHh-HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 3444 888999999999999999999999887754
No 23
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=57.68 E-value=59 Score=24.57 Aligned_cols=89 Identities=12% Similarity=0.220 Sum_probs=42.3
Q ss_pred HHHhhhhhccCCccCc-cchhhHHHHHHHHHHHHHHHhhhhhhheeceeeccceeEEeeeCCCCCcccchhHHHHHHHHH
Q psy5549 137 SMDRYFCIVVPPYRSK-LTPHRVLLLTLGTWFIACVVFVPVVLWFREQEVLESRLICTIVFPNVPTVSVSTAFTVVMVVL 215 (331)
Q Consensus 137 sidR~~ai~~~p~~~~-~~~~~~~~~i~~~w~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~ 215 (331)
.+|++-.+- .....+ ....|....+=..|.++..+.++.++..-.. .|+..+-+.+. .......
T Consensus 87 nIeav~~~h-~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL~eval-------l~WVKF~~~~~-------~aa~~~t 151 (214)
T 4hkr_A 87 NIETVSNLH-SISLVHESPHERLHWYIETAWAFSTLLGLILFLLEIAI-------LCWVKFYDLSR-------RAAWSAT 151 (214)
T ss_dssp C-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHTTTCH-------HHHHHHH
T ss_pred HHHHHhhcc-cccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hheEEeecCCc-------HHHHHHH
Confidence 455554443 211222 4556677888899999998887776643322 35544332221 1223333
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHhchh
Q psy5549 216 ACLLPLALLVYYY-CAIFRKLVETKK 240 (331)
Q Consensus 216 ~~~~p~~~~~~~~-~~i~~~~~~~~~ 240 (331)
..++|..++.+.+ ++-+|.+-+++.
T Consensus 152 ~vliPv~i~F~~Fa~hFYrsL~~hk~ 177 (214)
T 4hkr_A 152 VVLIPVMIIFMAFAIHFYRSLVSHKY 177 (214)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777665444 444565555544
No 24
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=29.93 E-value=63 Score=16.70 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=12.2
Q ss_pred HHHHHH-HHHHHHHHHHHHhchh
Q psy5549 219 LPLALL-VYYYCAIFRKLVETKK 240 (331)
Q Consensus 219 ~p~~~~-~~~~~~i~~~~~~~~~ 240 (331)
+|++++ .+.|..+.|--+|+.+
T Consensus 7 l~~v~~~~ifYFl~iRPQ~Kr~K 29 (37)
T 2rdd_B 7 LMLVVFGLIFYFMILRPQQKRTK 29 (37)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHH
Confidence 444433 5567777765555544
No 25
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=27.97 E-value=2.7e+02 Score=23.44 Aligned_cols=75 Identities=11% Similarity=0.168 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhccccccchhhhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCC
Q psy5549 211 VMVVLACLLPLALLVYYYCAIFRKLVETKKKWEHSHLSSHHARHTRVMRMLCISVCVILAMWLPIFLTMILIYIDGR 287 (331)
Q Consensus 211 ~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~ 287 (331)
.......++.+++-++.....+..+.++.+ +.....+.++++++..+....+.++.++..+-+.-..+.......
T Consensus 288 ~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~ 362 (434)
T 4ea3_A 288 VFAICIFLFSFIVPVLVISVCYSLMIRRLR--GVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGL 362 (434)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHT--TCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hccccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333444444444444444555555544433 144444454555556666666666555544444444444444433
No 26
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=23.59 E-value=87 Score=16.22 Aligned_cols=18 Identities=6% Similarity=0.331 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHhhhc
Q psy5549 44 SAEICLLSIIFILSMGAN 61 (331)
Q Consensus 44 ~~~~~~~~~~~~~g~~~N 61 (331)
+...+++..++++|.+.|
T Consensus 9 y~vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 9 YIVVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHccccCC
Confidence 455667777888888877
Done!