BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5554
(272 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|440906263|gb|ELR56546.1| hypothetical protein M91_19203, partial [Bos grunniens mutus]
Length = 154
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 106/152 (69%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 3 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 62
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 63 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 122
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
LR+C+T + LR+C+T + LR+C+T + R
Sbjct: 123 LRDCHTKYVRLRDCHTKYIRLRDCHTKYVRQR 154
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 106/152 (69%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 3 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 62
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 63 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 122
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
LR+C+T + LR+C+T + LR+C+T + R
Sbjct: 123 LRDCHTKYVRLRDCHTKYIRLRDCHTKYVRQR 154
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 106/152 (69%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 3 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 62
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 63 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 122
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
LR+C+T + LR+C+T + LR+C+T + R
Sbjct: 123 LRDCHTKYVRLRDCHTKYIRLRDCHTKYVRQR 154
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 106/152 (69%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 102
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 3 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 62
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 63 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 122
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
LR+C+T + LR+C+T + LR+C+T + R
Sbjct: 123 LRDCHTKYVRLRDCHTKYIRLRDCHTKYVRQR 154
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 106/152 (69%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 3 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 62
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 63 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 122
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 204
LR+C+T + LR+C+T + LR+C+T + R
Sbjct: 123 LRDCHTKYVRLRDCHTKYIRLRDCHTKYVRQR 154
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 106/152 (69%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 3 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 62
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 63 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 122
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
LR+C+T + LR+C+T + LR+C+T + R
Sbjct: 123 LRDCHTKYVRLRDCHTKYIRLRDCHTKYVRQR 154
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 106/152 (69%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 3 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 62
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 63 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 122
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
LR+C+T + LR+C+T + LR+C+T + R
Sbjct: 123 LRDCHTKYVRLRDCHTKYIRLRDCHTKYVRQR 154
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 106/152 (69%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 3 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 62
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 202
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 63 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 122
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
LR+C+T + LR+C+T + LR+C+T + R
Sbjct: 123 LRDCHTKYVRLRDCHTKYIRLRDCHTKYVRQR 154
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 105/149 (70%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 3 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 62
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T +
Sbjct: 63 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 122
Query: 213 LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
LR+C+T + LR+C+T + LR+C+T +
Sbjct: 123 LRDCHTKYVRLRDCHTKYIRLRDCHTKYV 151
>gi|156408239|ref|XP_001641764.1| predicted protein [Nematostella vectensis]
gi|156228904|gb|EDO49701.1| predicted protein [Nematostella vectensis]
Length = 301
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 115/246 (46%), Gaps = 10/246 (4%)
Query: 3 PIVAPISTK--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
P + P+ T+ G R +T GLR +T LR +T GLR +T LR +T
Sbjct: 47 PRLRPLDTEQPGYRPQDTEQPGLRPLDTEQPRLRPQDTEQPGLRPLDTEQPRLRPLDTEQ 106
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--------LGLRNCNTGGLGLRNCNTGGLG 112
GLR +T GLR +T GLR +TG GLR +TG GLR +T
Sbjct: 107 PGLRPLDTEQPGLRPLDTEQPGLRPLDTGKCRPLDTEKPGLRPLDTGQPGLRPLDTEQPR 166
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
LR +T G R +T GLR +T GLR +T GLR +T LR +T G
Sbjct: 167 LRPLDTEQPGHRPLDTEQPGLRPLDTEQPGLRPLDTEQPGLRPLDTEQPILRPLDTEQPG 226
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
LR +T LR +T LR +T GLR NT GLR +T GLR +T G
Sbjct: 227 LRPLDTEQPRLRPLDTEQPRLRPLDTKQPGLRPLNTKQPGLRPLDTEQPGLRPLDTEQPG 286
Query: 233 LRNCNT 238
LR +T
Sbjct: 287 LRPLDT 292
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 112/242 (46%), Gaps = 10/242 (4%)
Query: 7 PISTK--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 64
P+ T+ GLR +TG GLR +T LR +T G R +T LR +T G R
Sbjct: 1 PLDTEKPGLRPLDTGQPGLRPLDTEQPRLRPLDTEQPGHRPLDTEQPRLRPLDTEQPGYR 60
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+T GLR +T LR +T GLR +T LR +T GLR +T GLR
Sbjct: 61 PQDTEQPGLRPLDTEQPRLRPQDTEQPGLRPLDTEQPRLRPLDTEQPGLRPLDTEQPGLR 120
Query: 125 NCNTGGLGLRNCNTG--------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
+T GLR +TG GLR +TG GLR +T LR +T G R
Sbjct: 121 PLDTEQPGLRPLDTGKCRPLDTEKPGLRPLDTGQPGLRPLDTEQPRLRPLDTEQPGHRPL 180
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+T GLR +T GLR +T GLR +T LR +T GLR +T LR
Sbjct: 181 DTEQPGLRPLDTEQPGLRPLDTEQPGLRPLDTEQPILRPLDTEQPGLRPLDTEQPRLRPL 240
Query: 237 NT 238
+T
Sbjct: 241 DT 242
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 63/134 (47%)
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
+T GLR +TG GLR +T LR +T G R +T LR +T G R
Sbjct: 2 LDTEKPGLRPLDTGQPGLRPLDTEQPRLRPLDTEQPGHRPLDTEQPRLRPLDTEQPGYRP 61
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
+T GLR +T LR +T GLR +T LR +T GLR +T GLR
Sbjct: 62 QDTEQPGLRPLDTEQPRLRPQDTEQPGLRPLDTEQPRLRPLDTEQPGLRPLDTEQPGLRP 121
Query: 226 CNTGGLGLRNCNTG 239
+T GLR +TG
Sbjct: 122 LDTEQPGLRPLDTG 135
>gi|395503012|ref|XP_003755867.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-interacting
protein 1 [Sarcophilus harrisii]
Length = 1709
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 90/239 (37%), Gaps = 10/239 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
+ NC L L + + L + N N + NC L L NC+ L NC L
Sbjct: 1202 SIENCEETKLSLEDYDEAKLAIENYNEEKERVENCKEAKLSLENCDEEEQSLANCEEAKL 1261
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN---- 127
L + + L + NC+ L NC+ L L NC+ + NC+ L L NC+
Sbjct: 1262 SLEDYDEAKLAIENCDEENKSLENCDKAKLSLENCDEVEQFIENCDEAKLSLENCDKATE 1321
Query: 128 ---TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
L L NC+ N L L NC+ + C+ L N + L L
Sbjct: 1322 NGEEAKLSLENCDKAT---ENGEEAKLSLENCDEEEQSIEICDEEKQSLENSDKAKLSLE 1378
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NC+ + NC L L N L + N + L + N + + N L+V
Sbjct: 1379 NCDEEEQSIENCGEAKLRLENFEDDNLSIENSDEAKLPIENRDEEKDSIENDKEMPLLV 1437
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 105/274 (38%), Gaps = 23/274 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
NC+ + NC+ + NCN + C+ + NC L L + + L +
Sbjct: 1165 NCDEAKSPIGNCDEAKPPIGNCNKEKQSIEVCHEFKPSIENCEETKLSLEDYDEAKLAIE 1224
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
N N + NC L L NC+ L NC L L + + L + NC+ L
Sbjct: 1225 NYNEEKERVENCKEAKLSLENCDEEEQSLANCEEAKLSLEDYDEAKLAIENCDEENKSLE 1284
Query: 135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-------TGGLGLRNCN-------TGG 180
NC+ L L NC+ + NC+ L L NC+ L L NC+
Sbjct: 1285 NCDKAKLSLENCDEVEQFIENCDEAKLSLENCDKATENGEEAKLSLENCDKATENGEEAK 1344
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L L NC+ + C+ L N + L L NC+ + NC L L N
Sbjct: 1345 LSLENCDEEEQSIEICDEEKQSLENSDKAKLSLENCDEEEQSIENCGEAKLRLENFEDDN 1404
Query: 241 LIV--------PKSKRGAQENASRSENE-PCLVK 265
L + P R ++++ ++ E P LV+
Sbjct: 1405 LSIENSDEAKLPIENRDEEKDSIENDKEMPLLVE 1438
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 94/259 (36%), Gaps = 14/259 (5%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+ L NC L L + + L + NC+ L NC+ L L NC+ + NC+
Sbjct: 1249 EEQSLANCEEAKLSLEDYDEAKLAIENCDEENKSLENCDKAKLSLENCDEVEQFIENCDE 1308
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
L L NC+ N L L NC+ N L L NC+ + C+
Sbjct: 1309 AKLSLENCDKAT---ENGEEAKLSLENCDKAT---ENGEEAKLSLENCDEEEQSIEICDE 1362
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 188
L N + L L NC+ + NC L L N L + N + L + N +
Sbjct: 1363 EKQSLENSDKAKLSLENCDEEEQSIENCGEAKLRLENFEDDNLSIENSDEAKLPIENRDE 1422
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
+ N L + + N + N N + + + N L
Sbjct: 1423 EKDSIENDKEMPLLVEDYNKAPEPIENYNEKLIKI-PTEEENILFHQMNEDKL------S 1475
Query: 249 GAQENASRSENEPCLVKIK 267
GA + A++ E E C ++K
Sbjct: 1476 GAIDEATK-EPEECYPEVK 1493
>gi|260819543|ref|XP_002605096.1| hypothetical protein BRAFLDRAFT_85244 [Branchiostoma floridae]
gi|229290426|gb|EEN61106.1| hypothetical protein BRAFLDRAFT_85244 [Branchiostoma floridae]
Length = 697
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 127/231 (54%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G +++C + G + +C + G +++C + G + +C + G + +C + G
Sbjct: 192 IKDCYSSGACIKDCYSSGACIEDCYSSGACIKDCYSSGACITDCYSSGACIEDCYSSGAC 251
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
++ + G +++C + G +++C + G +++C + + +C + G + +C + G
Sbjct: 252 IKARYSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRACITDCYSSGACIEDCYSSGAC 311
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
++ + G +++C + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 312 IKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 371
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+C + G +++C + G +++C + G +++C + G +++C + G +
Sbjct: 372 KTDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACI 422
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 127/231 (54%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G + +C + G +++C + G + +C + G + +C + G ++ + G
Sbjct: 202 IKDCYSSGACIEDCYSSGACIKDCYSSGACITDCYSSGACIEDCYSSGACIKARYSSGAC 261
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++C + G +++C + G +++C + + +C + G + +C + G ++ + G
Sbjct: 262 IKDCYSSGACIKDCYSSGACIKDCCSSRACITDCYSSGACIEDCYSSGACIKARYSSGAC 321
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++C + G +++C + G +++C + G +++C + G +++C + G +C + G
Sbjct: 322 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACKTDCYSSGAC 381
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+++C + G +++C + G +++C + G +++C + G +++C + G +
Sbjct: 382 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACI 432
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 44/241 (18%), Positives = 132/241 (54%), Gaps = 10/241 (4%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G +++C + G +++C + + +C + G + +C + G ++ + G
Sbjct: 262 IKDCYSSGACIKDCYSSGACIKDCCSSRACITDCYSSGACIEDCYSSGACIKARYSSGAC 321
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++C + G +++C + G +++C + G +++C + G +++C + G +C + G
Sbjct: 322 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACKTDCYSSGAC 381
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN------C 186
+++C + G +++C + G +++C + G +++C + G +++C + G +++ C
Sbjct: 382 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGAC 441
Query: 187 ----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ G +++C + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 442 IKDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 501
Query: 243 V 243
+
Sbjct: 502 I 502
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 44/251 (17%), Positives = 133/251 (52%), Gaps = 20/251 (7%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G +++C + G +++C + G +++C + G +++C + G +C + G
Sbjct: 322 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACKTDCYSSGAC 381
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---------------- 116
+++C + G +++C + G +++C + G +++C + G +++C
Sbjct: 382 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGAC 441
Query: 117 ----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
+ G +++C + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 442 IKDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 501
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+++ + G + +C + G + + + G +++C + G +++C + G +++C + G
Sbjct: 502 IKDRYSSGACITDCYSSGACIEDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 561
Query: 233 LRNCNTGGLIV 243
+++C + G +
Sbjct: 562 IKDCYSSGACI 572
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 131/231 (56%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G +++C + G +C + G +++C + G +++C + G +++C + G
Sbjct: 352 IKDCYSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 411
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++C + G +++C + G +++ + G +++ + G +++C + G +++C + G
Sbjct: 412 IKDCYSSGACIKDCYSSGACIKDRYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGAC 471
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++C + G +++C + G +++C + G +++ + G + +C + G + + + G
Sbjct: 472 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACITDCYSSGACIEDRYSSGAC 531
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+++C + G +++C + G +++C + G +++C + G +++C + G +
Sbjct: 532 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACI 582
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 123/223 (55%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ +C + G +++C + G + +C + G + +C + G ++ + G +++C + G
Sbjct: 212 IEDCYSSGACIKDCYSSGACITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGAC 271
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++C + G +++C + + +C + G + +C + G ++ + G +++C + G
Sbjct: 272 IKDCYSSGACIKDCCSSRACITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGAC 331
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++C + G +++C + G +++C + G +++C + G +C + G +++C + G
Sbjct: 332 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGAC 391
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
+++C + G +++C + G +++C + G +++C + G +++
Sbjct: 392 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKD 434
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 129/232 (55%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ +C + G + +C + G ++ + G +++C + G +++C + G +++C + G
Sbjct: 292 ITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 351
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++C + G +++C + G +C + G +++C + G +++C + G +++C + G
Sbjct: 352 IKDCYSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 411
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++C + G +++C + G +++ + G +++ + G +++C + G +++C + G
Sbjct: 412 IKDCYSSGACIKDCYSSGACIKDRYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGAC 471
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
+++C + G +++C + G +++C + G +++ + G + +C + G +
Sbjct: 472 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACITDCYSSGACIE 523
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 123/227 (54%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+ G +++C + G +++C + G + +C + G +++C + G + +C + G + +C
Sbjct: 186 YSSGACIKDCYSSGACIKDCYSSGACIEDCYSSGACIKDCYSSGACITDCYSSGACIEDC 245
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
+ G ++ + G +++C + G +++C + G +++C + + +C + G + +C
Sbjct: 246 YSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRACITDCYSSGACIEDC 305
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
+ G ++ + G +++C + G +++C + G +++C + G +++C + G +++C
Sbjct: 306 YSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDC 365
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ G +C + G +++C + G +++C + G +++C + G +
Sbjct: 366 YSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACI 412
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 126/231 (54%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G +++ + G +++C + G +++C + G + +C + G +++C + G
Sbjct: 172 IKDCYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIEDCYSSGACIKDCYSSGAC 231
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+ +C + G + +C + G ++ + G +++C + G +++C + G +++C +
Sbjct: 232 ITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRAC 291
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+ +C + G + +C + G ++ + G +++C + G +++C + G +++C + G
Sbjct: 292 ITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 351
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+++C + G +++C + G +C + G +++C + G +++C + G +
Sbjct: 352 IKDCYSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGACI 402
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 40/223 (17%), Positives = 126/223 (56%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + + +C + G + +C + G ++ + G +++C + G +++C + G
Sbjct: 282 IKDCCSSRACITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGAC 341
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++C + G +++C + G +++C + G +C + G +++C + G +++C + G
Sbjct: 342 IKDCYSSGACIKDCYSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGAC 401
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++C + G +++C + G +++C + G +++ + G +++ + G +++C + G
Sbjct: 402 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACIKDRYSSGACIKDCYSSGAC 461
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
+++C + G +++C + G +++C + G +++C + G +++
Sbjct: 462 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKD 504
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 40/223 (17%), Positives = 127/223 (56%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G +C + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 362 IKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 421
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++C + G +++ + G +++ + G +++C + G +++C + G +++C + G
Sbjct: 422 IKDCYSSGACIKDRYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 481
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++C + G +++C + G +++ + G + +C + G + + + G +++C + G
Sbjct: 482 IKDCYSSGACIKDCYSSGACIKDRYSSGACITDCYSSGACIEDRYSSGACIKDCYSSGAC 541
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
+++C + G +++C + G +++C + G +++C + G +++
Sbjct: 542 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKD 584
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 43/247 (17%), Positives = 129/247 (52%), Gaps = 20/247 (8%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+ G +++C + G +++C + G +++C + G +++C + G +++C + G +C
Sbjct: 316 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACKTDC 375
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---------- 126
+ G +++C + G +++C + G +++C + G +++C + G +++C
Sbjct: 376 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDR 435
Query: 127 ----------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
+ G +++C + G +++C + G +++C + G +++C + G +++C
Sbjct: 436 YSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDC 495
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+ G +++ + G + +C + G + + + G +++C + G +++C + G +++C
Sbjct: 496 YSSGACIKDRYSSGACITDCYSSGACIEDRYSSGACIKDCYSSGACIKDCYSSGACIKDC 555
Query: 237 NTGGLIV 243
+ G +
Sbjct: 556 YSSGACI 562
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 41/234 (17%), Positives = 130/234 (55%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G +++C + G +++C + G +++C + G +++C + G +++ + G
Sbjct: 382 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGAC 441
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++ + G +++C + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 442 IKDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 501
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++ + G + +C + G + + + G +++C + G +++C + G +++C + G
Sbjct: 502 IKDRYSSGACITDCYSSGACIEDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 561
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
+++C + G +++C + G +++ + G + +C + G ++C + + S
Sbjct: 562 IKDCYSSGACIKDCYSSGACIKDRYSSGACIEDCYSSGACEKDCYSSWACIKDS 615
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 41/226 (18%), Positives = 128/226 (56%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
+C + G +++C + G +++C + G +++C + G +++C + G +++C + G ++
Sbjct: 374 DCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIK 433
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
+ + G +++ + G +++C + G +++C + G +++C + G +++C + G ++
Sbjct: 434 DRYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIK 493
Query: 135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
+C + G +++ + G + +C + G + + + G +++C + G +++C + G ++
Sbjct: 494 DCYSSGACIKDRYSSGACITDCYSSGACIEDRYSSGACIKDCYSSGACIKDCYSSGACIK 553
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
+C + G +++C + G +++C + G +++ + G + +C + G
Sbjct: 554 DCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACIEDCYSSG 599
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 43/251 (17%), Positives = 129/251 (51%), Gaps = 20/251 (7%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ +C + G ++ + G +++C + G +++C + G +++C + + +C + G
Sbjct: 242 IEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRACITDCYSSGAC 301
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+ +C + G ++ + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 302 IEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 361
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++C + G +C + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 362 IKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 421
Query: 193 LRNC--------------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+++C + G +++C + G +++C + G +++C + G
Sbjct: 422 IKDCYSSGACIKDRYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 481
Query: 233 LRNCNTGGLIV 243
+++C + G +
Sbjct: 482 IKDCYSSGACI 492
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 40/223 (17%), Positives = 125/223 (56%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ +C + G ++ + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 302 IEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 361
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++C + G +C + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 362 IKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 421
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++C + G +++ + G +++ + G +++C + G +++C + G +++C + G
Sbjct: 422 IKDCYSSGACIKDRYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 481
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
+++C + G +++C + G +++ + G + +C + G + +
Sbjct: 482 IKDCYSSGACIKDCYSSGACIKDRYSSGACITDCYSSGACIED 524
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 40/223 (17%), Positives = 123/223 (55%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G + +C + G + +C + G ++ + G +++C + G +++C + G
Sbjct: 222 IKDCYSSGACITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGAC 281
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++C + + +C + G + +C + G ++ + G +++C + G +++C + G
Sbjct: 282 IKDCCSSRACITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGAC 341
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++C + G +++C + G +++C + G +C + G +++C + G +++C + G
Sbjct: 342 IKDCYSSGACIKDCYSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGAC 401
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
+++C + G +++C + G +++C + G +++ + G +++
Sbjct: 402 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACIKD 444
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 43/251 (17%), Positives = 128/251 (50%), Gaps = 20/251 (7%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ +C + G + +C + G ++ + G +++C + G +++C + G +++C +
Sbjct: 232 ITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRAC 291
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+ +C + G + +C + G ++ + G +++C + G +++C + G +++C + G
Sbjct: 292 ITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 351
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++C + G +++C + G +C + G +++C + G +++C + G +++C + G
Sbjct: 352 IKDCYSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 411
Query: 193 LRNCNTGGLGLRNC--------------------NTGGLGLRNCNTGGLGLRNCNTGGLG 232
+++C + G +++C + G +++C + G +++C + G
Sbjct: 412 IKDCYSSGACIKDCYSSGACIKDRYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGAC 471
Query: 233 LRNCNTGGLIV 243
+++C + G +
Sbjct: 472 IKDCYSSGACI 482
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 41/227 (18%), Positives = 122/227 (53%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+ G +++C + G +++ + G +++C + G +++C + G + +C + G +++C
Sbjct: 166 YSSGACIKDCYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIEDCYSSGACIKDC 225
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
+ G + +C + G + +C + G ++ + G +++C + G +++C + G +++C
Sbjct: 226 YSSGACITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDC 285
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
+ + +C + G + +C + G ++ + G +++C + G +++C + G +++C
Sbjct: 286 CSSRACITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDC 345
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ G +++C + G +++C + G +C + G +++C + G +
Sbjct: 346 YSSGACIKDCYSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGACI 392
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 39/231 (16%), Positives = 128/231 (55%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G +++C + G +++C + G +++C + G +++ + G +++ + G
Sbjct: 392 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACIKDRYSSGAC 451
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++C + G +++C + G +++C + G +++C + G +++C + G +++ + G
Sbjct: 452 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGAC 511
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+ +C + G + + + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 512 ITDCYSSGACIEDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 571
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+++C + G +++ + G + +C + G ++C + +++ + G +
Sbjct: 572 IKDCYSSGACIKDRYSSGACIEDCYSSGACEKDCYSSWACIKDSYSSGACI 622
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 40/228 (17%), Positives = 124/228 (54%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G +++ + G ++ + G +++C + G +++ + G +++C + G
Sbjct: 142 IKDCYSFGACIKDRYSSGACIKARYSSGACIKDCYSSGACIKDRYSSGACIKDCYSSGAC 201
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++C + G + +C + G +++C + G + +C + G + +C + G ++ + G
Sbjct: 202 IKDCYSSGACIEDCYSSGACIKDCYSSGACITDCYSSGACIEDCYSSGACIKARYSSGAC 261
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++C + G +++C + G +++C + + +C + G + +C + G ++ + G
Sbjct: 262 IKDCYSSGACIKDCYSSGACIKDCCSSRACITDCYSSGACIEDCYSSGACIKARYSSGAC 321
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
+++C + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 322 IKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 369
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 39/227 (17%), Positives = 121/227 (53%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+ G +++C + G +++ + G ++ + G +++C + G +++ + G +++C
Sbjct: 136 YSSGACIKDCYSFGACIKDRYSSGACIKARYSSGACIKDCYSSGACIKDRYSSGACIKDC 195
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
+ G +++C + G + +C + G +++C + G + +C + G + +C + G ++
Sbjct: 196 YSSGACIKDCYSSGACIEDCYSSGACIKDCYSSGACITDCYSSGACIEDCYSSGACIKAR 255
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
+ G +++C + G +++C + G +++C + + +C + G + +C + G ++
Sbjct: 256 YSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRACITDCYSSGACIEDCYSSGACIKAR 315
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ G +++C + G +++C + G +++C + G +++C + G +
Sbjct: 316 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACI 362
>gi|301619196|ref|XP_002938987.1| PREDICTED: hypothetical protein LOC100487312 [Xenopus (Silurana)
tropicalis]
Length = 441
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 130/234 (55%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++ NT + +++ NT + +++ NT + +++ NT + L++ NT + +++ NT +
Sbjct: 55 VQDTNTKDILVQDTNTKDILVQDTNTVDILVQDTNTIDIFLQDTNTMDILVQDTNTMDIL 114
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++ NT +++ N + + + NT + +++ NT +++ N + + + NT +
Sbjct: 115 VQDTNTVDTLMQDTNIVDILVHDTNTVDILVQDTNTVDTLMQDTNIVDILVHDTNTMDIL 174
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++ NT + +++ NT + +++ NT + +++ NT + +++ NT + +++ N +
Sbjct: 175 VQDANTVDILVQDANTMDILVQDTNTMDILVQDTNTVDILVQDTNTVDILVQDTNIVDIL 234
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
+ + NT + +++ NT +++ N + + + NT + +++ NT ++V +
Sbjct: 235 VHDTNTVDILVQDTNTVDTLMQDTNIVDILVHDTNTVDILVQDTNTMDILVQDT 288
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 44/234 (18%), Positives = 130/234 (55%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++ NT + +++ NT + +++ NT + +++ NT + +++ NT + L++ NT +
Sbjct: 45 VQDTNTVDILVQDTNTKDILVQDTNTKDILVQDTNTVDILVQDTNTIDIFLQDTNTMDIL 104
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++ NT + +++ NT +++ N + + + NT + +++ NT +++ N +
Sbjct: 105 VQDTNTMDILVQDTNTVDTLMQDTNIVDILVHDTNTVDILVQDTNTVDTLMQDTNIVDIL 164
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+ + NT + +++ NT + +++ NT + +++ NT + +++ NT + +++ NT +
Sbjct: 165 VHDTNTMDILVQDANTVDILVQDANTMDILVQDTNTMDILVQDTNTVDILVQDTNTVDIL 224
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
+++ N + + + NT + +++ NT +++ N + + + NT ++V +
Sbjct: 225 VQDTNIVDILVHDTNTVDILVQDTNTVDTLMQDTNIVDILVHDTNTVDILVQDT 278
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 129/233 (55%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
+ NT + +++ NT + +++ NT + +++ NT + +++ NT + +++ NT + L
Sbjct: 36 EDTNTVDILVQDTNTVDILVQDTNTKDILVQDTNTKDILVQDTNTVDILVQDTNTIDIFL 95
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
++ NT + +++ NT + +++ NT +++ N + + + NT + +++ NT +
Sbjct: 96 QDTNTMDILVQDTNTMDILVQDTNTVDTLMQDTNIVDILVHDTNTVDILVQDTNTVDTLM 155
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
++ N + + + NT + +++ NT + +++ NT + +++ NT + +++ NT + +
Sbjct: 156 QDTNIVDILVHDTNTMDILVQDANTVDILVQDANTMDILVQDTNTMDILVQDTNTVDILV 215
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
++ NT + +++ N + + + NT + +++ NT +++ N ++V +
Sbjct: 216 QDTNTVDILVQDTNIVDILVHDTNTVDILVQDTNTVDTLMQDTNIVDILVHDT 268
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 132/234 (56%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++ NT + +++ NT + +++ NT + + NT + +++ NT + +++ NT +
Sbjct: 5 VQDANTMDILVQDTNTVDILVQDTNTVDILGEDTNTVDILVQDTNTVDILVQDTNTKDIL 64
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++ NT + +++ NT + +++ NT + L++ NT + +++ NT + +++ NT
Sbjct: 65 VQDTNTKDILVQDTNTVDILVQDTNTIDIFLQDTNTMDILVQDTNTMDILVQDTNTVDTL 124
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++ N + + + NT + +++ NT +++ N + + + NT + +++ NT +
Sbjct: 125 MQDTNIVDILVHDTNTVDILVQDTNTVDTLMQDTNIVDILVHDTNTMDILVQDANTVDIL 184
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
+++ NT + +++ NT + +++ NT + +++ NT + +++ N ++V +
Sbjct: 185 VQDANTMDILVQDTNTMDILVQDTNTVDILVQDTNTVDILVQDTNIVDILVHDT 238
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 131/234 (55%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++ NT + +++ NT + + NT + +++ NT + +++ NT + +++ NT +
Sbjct: 15 VQDTNTVDILVQDTNTVDILGEDTNTVDILVQDTNTVDILVQDTNTKDILVQDTNTKDIL 74
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++ NT + +++ NT + L++ NT + +++ NT + +++ NT +++ N +
Sbjct: 75 VQDTNTVDILVQDTNTIDIFLQDTNTMDILVQDTNTMDILVQDTNTVDTLMQDTNIVDIL 134
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+ + NT + +++ NT +++ N + + + NT + +++ NT + +++ NT +
Sbjct: 135 VHDTNTVDILVQDTNTVDTLMQDTNIVDILVHDTNTMDILVQDANTVDILVQDANTMDIL 194
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
+++ NT + +++ NT + +++ NT + +++ N + + + NT ++V +
Sbjct: 195 VQDTNTMDILVQDTNTVDILVQDTNTVDILVQDTNIVDILVHDTNTVDILVQDT 248
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 129/234 (55%), Gaps = 2/234 (0%)
Query: 10 TKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
TK + ++ NT + +++ NT + +++ NT + L++ NT + +++ NT + +++ N
Sbjct: 60 TKDILVQDTNTKDILVQDTNTVDILVQDTNTIDIFLQDTNTMDILVQDTNTMDILVQDTN 119
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T +++ N + + + NT + +++ NT +++ N + + + NT + +++ N
Sbjct: 120 TVDTLMQDTNIVDILVHDTNTVDILVQDTNTVDTLMQDTNIVDILVHDTNTMDILVQDAN 179
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T + +++ NT + +++ NT + +++ NT + +++ NT + +++ N + + + N
Sbjct: 180 TVDILVQDANTMDILVQDTNTMDILVQDTNTVDILVQDTNTVDILVQDTNIVDILVHDTN 239
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T + +++ NT +++ N + + + NT + +++ NT + +++ NT +
Sbjct: 240 TVDILVQDTNTVDTLMQDTNIVDILVHDTNTVDILVQDTNTMDILVQDTNTVDI 293
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 127/228 (55%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++ NT + + NT + +++ NT + +++ NT + +++ NT + +++ NT +
Sbjct: 25 VQDTNTVDILGEDTNTVDILVQDTNTVDILVQDTNTKDILVQDTNTKDILVQDTNTVDIL 84
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++ NT + L++ NT + +++ NT + +++ NT +++ N + + + NT +
Sbjct: 85 VQDTNTIDIFLQDTNTMDILVQDTNTMDILVQDTNTVDTLMQDTNIVDILVHDTNTVDIL 144
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+++ NT +++ N + + + NT + +++ NT + +++ NT + +++ NT +
Sbjct: 145 VQDTNTVDTLMQDTNIVDILVHDTNTMDILVQDANTVDILVQDANTMDILVQDTNTMDIL 204
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
+++ NT + +++ NT + +++ N + + + NT + +++ NT
Sbjct: 205 VQDTNTVDILVQDTNTVDILVQDTNIVDILVHDTNTVDILVQDTNTVD 252
>gi|156339202|ref|XP_001620110.1| hypothetical protein NEMVEDRAFT_v1g66646 [Nematostella vectensis]
gi|156204499|gb|EDO28010.1| predicted protein [Nematostella vectensis]
Length = 239
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 10/234 (4%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
R C+ + R C+ + LR C+ + L C+ + LR C+ + LR C +
Sbjct: 1 FRMCSVCSVHFRMCSVCSVHLRMCSVRSVHLPMCSVCSVHLRMCSVCSVHLRMCGVRSVH 60
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L C+ + LR C+ + LR C+ + LR C+ + LR C+ + LR C+ +
Sbjct: 61 LPMCSACSVHLRMCSVCSVHLRMCSACSVHLRMCSACSVHLRMCSACSVHLRMCSACSVH 120
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNC----------NTGGLGLRNCNTGGLGLRNCNTGGLG 182
LR C+ + LR C+ + LR C + + LR C+ + LR C +
Sbjct: 121 LRMCSVCSVDLRMCSVCSVHLRMCGACSVHFHMFSACSVHLRMCSACSVHLRKCGACSVH 180
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
R + + LR C+ + LR C + LR C + R C + LR C
Sbjct: 181 FRMFSACSVHLRMCSVCSVHLRMCGVCSVHLRMCGACSVHFRMCGACSVHLRMC 234
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 102
R C+ + R C+ + LR C+ + L C+ + LR C+ + LR C +
Sbjct: 1 FRMCSVCSVHFRMCSVCSVHLRMCSVRSVHLPMCSVCSVHLRMCSVCSVHLRMCGVRSVH 60
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
L C+ + LR C+ + LR C+ + LR C+ + LR C+ + LR C+ +
Sbjct: 61 LPMCSACSVHLRMCSVCSVHLRMCSACSVHLRMCSACSVHLRMCSACSVHLRMCSACSVH 120
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
LR C+ + LR C+ + LR C + + + LR C+ + LR C +
Sbjct: 121 LRMCSVCSVDLRMCSVCSVHLRMCGACSVHFHMFSACSVHLRMCSACSVHLRKCGACSVH 180
Query: 223 LRNCNTGGLGLRNCNTGGL 241
R + + LR C+ +
Sbjct: 181 FRMFSACSVHLRMCSVCSV 199
>gi|156402770|ref|XP_001639763.1| predicted protein [Nematostella vectensis]
gi|156226893|gb|EDO47700.1| predicted protein [Nematostella vectensis]
Length = 156
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 2 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLP 61
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
LGL+ + LGL+ + LGL+ + LGL+ + LGLR + LGL+ +
Sbjct: 62 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPALGLQYLSLP 121
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
LGL+ + LGL+ + LGL+ + LGL+
Sbjct: 122 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQ 156
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 2 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLP 61
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
LGL+ + LGL+ + LGL+ + LGL+ + LGLR + LGL+ +
Sbjct: 62 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPALGLQYLSLP 121
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
LGL+ + LGL+ + LGL+ + LGL+
Sbjct: 122 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQ 156
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 99
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 2 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLP 61
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL+ + LGL+ + LGL+ + LGL+ + LGLR + LGL+ +
Sbjct: 62 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPALGLQYLSLP 121
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
LGL+ + LGL+ + LGL+ + LGL+
Sbjct: 122 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQ 156
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 2 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLP 61
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
LGL+ + LGL+ + LGL+ + LGL+ + LGLR + LGL+ +
Sbjct: 62 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPALGLQYLSLP 121
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 204
LGL+ + LGL+ + LGL+ + LGL+
Sbjct: 122 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQ 156
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 2 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLP 61
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
LGL+ + LGL+ + LGL+ + LGL+ + LGLR + LGL+ +
Sbjct: 62 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPALGLQYLSLP 121
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
LGL+ + LGL+ + LGL+ + LGL+
Sbjct: 122 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQ 156
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 2 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLP 61
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
LGL+ + LGL+ + LGL+ + LGL+ + LGLR + LGL+ +
Sbjct: 62 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPALGLQYLSLP 121
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
LGL+ + LGL+ + LGL+ + LGL+
Sbjct: 122 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQ 156
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 2 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLP 61
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
LGL+ + LGL+ + LGL+ + LGL+ + LGLR + LGL+ +
Sbjct: 62 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPALGLQYLSLP 121
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
LGL+ + LGL+ + LGL+ + LGL+
Sbjct: 122 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQ 156
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + L
Sbjct: 4 GLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPAL 63
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL+ + LGL+ + LGL+ + LGL+ + LGLR + LGL+ + L
Sbjct: 64 GLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPALGLQYLSLPAL 123
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
GL+ + LGL+ + LGL+ + LGL+
Sbjct: 124 GLQYLSLPALGLQYLSLPALGLQYLSLPALGLQ 156
>gi|407641927|ref|YP_006805686.1| histidine kinase [Nocardia brasiliensis ATCC 700358]
gi|407304811|gb|AFT98711.1| histidine kinase [Nocardia brasiliensis ATCC 700358]
Length = 1183
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 113/250 (45%), Gaps = 13/250 (5%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-----CNTGGLGLRNCNTGGLGL 73
GGL R GL R GGL R N GGL R GL R+ N GGL
Sbjct: 759 GGLPQRQRGENGLPQRESAAGGLPQREPNAGGLPPRQGPNGLPQREGLPPRDPNAGGLPQ 818
Query: 74 RN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
R + GL R GL R ++ GL R GGL R +GGL R+ + GL
Sbjct: 819 RPSAAPSPGLPQREAGANGLPQREPSS-GLPQREPGAGGLPQRESASGGLPQRDPSASGL 877
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
R GL R ++ GL R+ + GGL R GGL R ++ GL R+ + GGL
Sbjct: 878 PQRAAGASGLPQREPSS-GLPQRDPSAGGLPQRESAAGGLPQREPSS-GLPQRDPSAGGL 935
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQ 251
R+ ++ GL R+ + L R+ NTGGL R+ L R TG +P+ + G+Q
Sbjct: 936 PQRDSSSSGLPQRDPSGDVLPQRDSNTGGLPSRHAAATSLPQRETPTG---LPQRQPGSQ 992
Query: 252 ENASRSENEP 261
+ + EP
Sbjct: 993 VPPNLPQREP 1002
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 96/213 (45%), Gaps = 10/213 (4%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRN-----CNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNC 66
R GGL R N GGL R GL R+ N GGL R + GL R
Sbjct: 774 RESAAGGLPQREPNAGGLPPRQGPNGLPQREGLPPRDPNAGGLPQRPSAAPSPGLPQREA 833
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GL R ++G L R GGL R +GGL R+ + GL R GL R
Sbjct: 834 GANGLPQREPSSG-LPQREPGAGGLPQRESASGGLPQRDPSASGLPQRAAGASGLPQREP 892
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
++G L R+ + GGL R GGL R ++G L R+ + GGL R+ ++ GL R+
Sbjct: 893 SSG-LPQRDPSAGGLPQRESAAGGLPQREPSSG-LPQRDPSAGGLPQRDSSSSGLPQRDP 950
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ L R+ NTGGL R+ L R TG
Sbjct: 951 SGDVLPQRDSNTGGLPSRHAAATSLPQRETPTG 983
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P AP R GL R ++G L R GGL R +GGL R+ + GL
Sbjct: 820 PSAAPSPGLPQREAGANGLPQREPSSG-LPQREPGAGGLPQRESASGGLPQRDPSASGLP 878
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
R GL R ++G L R+ + GGL R GGL R ++G L R+ + GGL
Sbjct: 879 QRAAGASGLPQREPSSG-LPQRDPSAGGLPQRESAAGGLPQREPSSG-LPQRDPSAGGLP 936
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
R+ ++ GL R+ + L R+ NTGGL R+ L R TG
Sbjct: 937 QRDSSSSGLPQRDPSGDVLPQRDSNTGGLPSRHAAATSLPQRETPTG 983
>gi|156388151|ref|XP_001634565.1| predicted protein [Nematostella vectensis]
gi|156221649|gb|EDO42502.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 73/188 (38%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 77
T G NC G NC T G NC T G C T G NC T G NC
Sbjct: 1 THEYGWNNCCIHEYGWNNCCTHEYGWNNCCTHEYGWNICCTHEYGWNNCCTHEYGWNNCC 60
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 61 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 120
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 121 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 180
Query: 198 TGGLGLRN 205
T G N
Sbjct: 181 THEYGWNN 188
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 73/188 (38%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 87
T G NC G NC T G NC T G C T G NC T G NC
Sbjct: 1 THEYGWNNCCIHEYGWNNCCTHEYGWNNCCTHEYGWNICCTHEYGWNNCCTHEYGWNNCC 60
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 61 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 120
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 121 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 180
Query: 208 TGGLGLRN 215
T G N
Sbjct: 181 THEYGWNN 188
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 73/188 (38%)
Query: 38 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 97
T G NC G NC T G NC T G C T G NC T G NC
Sbjct: 1 THEYGWNNCCIHEYGWNNCCTHEYGWNNCCTHEYGWNICCTHEYGWNNCCTHEYGWNNCC 60
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 61 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 120
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 121 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 180
Query: 218 TGGLGLRN 225
T G N
Sbjct: 181 THEYGWNN 188
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 73/188 (38%)
Query: 48 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
T G NC G NC T G NC T G C T G NC T G NC
Sbjct: 1 THEYGWNNCCIHEYGWNNCCTHEYGWNNCCTHEYGWNICCTHEYGWNNCCTHEYGWNNCC 60
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 61 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 120
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 121 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 180
Query: 228 TGGLGLRN 235
T G N
Sbjct: 181 THEYGWNN 188
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 72/188 (38%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
G NC G NC T G NC T G C T G NC T G NC
Sbjct: 1 THEYGWNNCCIHEYGWNNCCTHEYGWNNCCTHEYGWNICCTHEYGWNNCCTHEYGWNNCC 60
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 61 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 120
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 121 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 180
Query: 188 TGGLGLRN 195
T G N
Sbjct: 181 THEYGWNN 188
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 71/184 (38%)
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
T G NC G NC T G NC T G C T G NC T G NC
Sbjct: 1 THEYGWNNCCIHEYGWNNCCTHEYGWNNCCTHEYGWNICCTHEYGWNNCCTHEYGWNNCC 60
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 61 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 120
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
T G NC T G NC T G NC T G NC T G NC T G NC
Sbjct: 121 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 180
Query: 238 TGGL 241
T
Sbjct: 181 THEY 184
>gi|426252498|ref|XP_004019948.1| PREDICTED: LOW QUALITY PROTEIN: EH domain-binding protein 1-like
protein 1 [Ovis aries]
Length = 1786
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 80/227 (35%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 841 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 900
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 901 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 960
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 961 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1020
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
R GG G +T L R GG G +T L R GG
Sbjct: 1021 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1067
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 80/227 (35%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 861 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 920
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 921 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 980
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 981 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1040
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
R GG G +T L R GG G +T L R GG
Sbjct: 1041 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1087
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 80/227 (35%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 881 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 940
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 941 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1000
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1001 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1060
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
R GG G +T L R GG G +T L R GG
Sbjct: 1061 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1107
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 80/227 (35%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 901 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 960
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 961 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1020
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1021 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1080
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
R GG G +T L R GG G +T L R GG
Sbjct: 1081 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1127
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 80/227 (35%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 921 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 980
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 981 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1040
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1041 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1100
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
R GG G +T L R GG G +T L R GG
Sbjct: 1101 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1147
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 80/227 (35%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 941 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1000
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1001 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1060
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1061 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1120
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
R GG G +T L R GG G +T L R GG
Sbjct: 1121 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1167
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 80/227 (35%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 961 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1020
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1021 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1080
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1081 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1140
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
R GG G +T L R GG G +T L R GG
Sbjct: 1141 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1187
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 80/227 (35%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 981 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1040
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1041 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1100
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1101 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1160
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
R GG G +T L R GG G +T L R GG
Sbjct: 1161 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1207
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 81/228 (35%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+R GG G +T L R GG G +T L R GG G +T L
Sbjct: 800 IRETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTEPLR 859
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 860 PRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLR 919
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 920 PRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLR 979
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
R GG G +T L R GG G +T L R GG
Sbjct: 980 PRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1027
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 80/227 (35%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 821 RETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 880
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 881 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 940
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 941 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1000
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
R GG G +T L R GG G +T L R GG
Sbjct: 1001 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1047
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 81/230 (35%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 849 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 908
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 909 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 968
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 969 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 1028
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G +T L R GG G +T L R GG G +T L
Sbjct: 1029 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1078
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 81/230 (35%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 869 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 928
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 929 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 988
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 989 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 1048
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G +T L R GG G +T L R GG G +T L
Sbjct: 1049 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1098
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 81/230 (35%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 909 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 968
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 969 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 1028
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 1029 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 1088
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G +T L R GG G +T L R GG G +T L
Sbjct: 1089 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1138
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 81/230 (35%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 949 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 1008
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 1009 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 1068
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 1069 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 1128
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G +T L R GG G +T L R GG G +T L
Sbjct: 1129 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1178
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 81/230 (35%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 989 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 1048
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 1049 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 1108
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 1109 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 1168
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G +T L R GG G +T L R GG G +T L
Sbjct: 1169 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1218
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 79/227 (34%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1001 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1060
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1061 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1120
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R GG G +T L R GG G +T L R GG G +T L
Sbjct: 1121 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRP 1180
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
R GG G +T L R GG G +T L R G
Sbjct: 1181 RETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEAPG 1227
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 82/230 (35%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G +T L +R GG G +T L R GG G +T L R GG
Sbjct: 789 GTPEMDTETLRIRETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTETLRTRETEVGGS 848
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 849 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 908
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 909 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 968
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G +T L R GG G +T L R GG G +T L
Sbjct: 969 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1018
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 81/230 (35%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 809 GAPEMDTETLRTRETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTEPLRPRETEVGGS 868
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 869 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 928
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
G +T L R GG G +T L R GG G +T L R GG
Sbjct: 929 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGS 988
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G +T L R GG G +T L R GG G +T L
Sbjct: 989 GAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1038
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 80/225 (35%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
GG G +T L +R GG G +T L R GG G +T L R
Sbjct: 783 IEAGGSGTPEMDTETLRIRETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTETLRTRE 842
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 843 TEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRE 902
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 903 TEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRE 962
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
GG G +T L R GG G +T L R GG
Sbjct: 963 TEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGG 1007
>gi|156385484|ref|XP_001633660.1| predicted protein [Nematostella vectensis]
gi|156220733|gb|EDO41597.1| predicted protein [Nematostella vectensis]
Length = 151
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 75/148 (50%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 3 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 62
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
LR C T G LR C T G +R C T G LR C T G LR C T G LR C T G
Sbjct: 63 LRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 122
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 160
LR C T G LR C T G LR C T G
Sbjct: 123 LRPCTTSGGPLRPCTTSGGPLRPCTTSG 150
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 75/148 (50%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 3 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 62
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
LR C T G LR C T G +R C T G LR C T G LR C T G LR C T G
Sbjct: 63 LRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 122
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
LR C T G LR C T G LR C T G
Sbjct: 123 LRPCTTSGGPLRPCTTSGGPLRPCTTSG 150
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 75/148 (50%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 3 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 62
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
LR C T G LR C T G +R C T G LR C T G LR C T G LR C T G
Sbjct: 63 LRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 122
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
LR C T G LR C T G LR C T G
Sbjct: 123 LRPCTTSGGPLRPCTTSGGPLRPCTTSG 150
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 75/148 (50%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 102
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 3 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 62
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
LR C T G LR C T G +R C T G LR C T G LR C T G LR C T G
Sbjct: 63 LRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 122
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
LR C T G LR C T G LR C T G
Sbjct: 123 LRPCTTSGGPLRPCTTSGGPLRPCTTSG 150
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 75/148 (50%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 3 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 62
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
LR C T G LR C T G +R C T G LR C T G LR C T G LR C T G
Sbjct: 63 LRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 122
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
LR C T G LR C T G LR C T G
Sbjct: 123 LRPCTTSGGPLRPCTTSGGPLRPCTTSG 150
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 75/148 (50%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 3 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 62
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
LR C T G LR C T G +R C T G LR C T G LR C T G LR C T G
Sbjct: 63 LRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 122
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
LR C T G LR C T G LR C T G
Sbjct: 123 LRPCTTSGGPLRPCTTSGGPLRPCTTSG 150
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 75/148 (50%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 3 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 62
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
LR C T G LR C T G +R C T G LR C T G LR C T G LR C T G
Sbjct: 63 LRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 122
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 220
LR C T G LR C T G LR C T G
Sbjct: 123 LRPCTTSGGPLRPCTTSGGPLRPCTTSG 150
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 75/148 (50%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 3 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 62
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 202
LR C T G LR C T G +R C T G LR C T G LR C T G LR C T G
Sbjct: 63 LRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 122
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
LR C T G LR C T G LR C T G
Sbjct: 123 LRPCTTSGGPLRPCTTSGGPLRPCTTSG 150
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 75/148 (50%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 3 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 62
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
LR C T G LR C T G +R C T G LR C T G LR C T G LR C T G
Sbjct: 63 LRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 122
Query: 213 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
LR C T G LR C T G LR C T G
Sbjct: 123 LRPCTTSGGPLRPCTTSGGPLRPCTTSG 150
>gi|344258207|gb|EGW14311.1| Putative DNA repair and recombination protein RAD26-like [Cricetulus
griseus]
Length = 1762
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T L + C T + + C T + + C T + + C T + +
Sbjct: 944 CVTDSVSVVLCVTDSLHVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1003
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1004 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1063
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1064 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1123
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1124 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1169
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T L + C T + + C T + + C T + + C T + + C T + +
Sbjct: 954 CVTDSLHVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1013
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1014 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1073
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1074 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1133
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1134 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1179
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 964 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1023
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1024 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1083
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1084 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1143
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1144 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1189
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 974 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1033
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1034 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1093
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1094 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1153
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1154 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1199
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 984 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1043
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1044 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1103
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1104 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1163
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1164 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1209
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 994 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1053
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1054 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1113
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1114 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1173
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1174 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1219
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1004 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1063
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1064 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1123
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1124 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1183
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1184 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1229
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1014 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1073
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1074 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1133
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1134 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1193
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1194 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1239
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1024 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1083
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1084 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1143
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1144 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1203
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1204 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1249
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1034 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1093
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1094 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1153
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1154 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1213
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1214 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1259
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1044 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1103
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1104 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1163
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1164 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1223
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1224 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1269
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1054 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1113
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1114 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1173
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1174 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1233
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1234 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1279
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1064 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1123
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1124 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1183
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1184 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1243
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1244 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1289
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1074 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1133
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1134 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1193
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1194 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1253
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1254 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1299
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1084 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1143
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1144 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1203
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1204 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1263
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1264 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1309
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1094 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1153
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1154 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1213
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1214 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1273
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1274 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1319
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1104 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1163
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1164 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1223
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1224 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1283
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1284 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1329
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1114 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1173
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1174 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1233
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1234 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1293
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1294 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1339
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1124 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1183
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1184 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1243
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1244 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1303
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1304 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1349
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1134 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1193
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1194 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1253
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1254 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1313
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1314 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1359
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1144 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1203
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1204 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1263
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1264 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1323
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1324 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1369
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1154 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1213
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1214 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1273
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1274 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1333
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1334 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1379
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1164 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1223
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1224 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1283
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1284 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1343
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1344 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1389
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1174 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1233
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1234 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1293
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1294 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1353
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1354 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1399
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1184 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1243
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1244 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1303
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1304 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1363
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1364 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1409
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1194 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1253
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1254 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1313
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1314 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1373
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1374 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1419
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1204 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1263
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1264 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1323
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1324 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1383
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1384 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1429
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1214 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1273
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1274 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1333
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1334 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1393
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1394 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1439
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1224 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1283
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1284 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1343
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1344 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1403
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1404 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1449
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1234 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1293
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1294 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1353
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1354 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1413
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1414 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1459
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1244 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1303
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1304 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1363
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1364 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1423
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1424 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1469
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1254 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1313
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1314 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1373
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1374 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1433
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1434 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1479
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1264 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1323
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1324 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1383
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1384 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1443
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1444 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1489
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1274 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1333
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1334 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1393
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1394 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1453
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1454 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1499
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1284 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1343
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1344 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1403
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1404 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1463
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1464 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1509
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1294 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1353
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1354 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1413
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1414 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1473
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1474 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1519
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1304 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1363
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1364 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1423
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1424 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1483
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1484 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1529
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1314 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1373
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1374 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1433
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1434 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1493
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1494 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1539
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1324 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1383
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1384 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1443
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1444 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1503
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1504 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1549
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1334 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1393
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1394 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1453
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1454 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1513
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1514 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1559
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1344 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1403
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1404 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1463
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1464 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1523
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1524 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1569
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1354 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1413
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1414 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1473
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1474 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1533
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1534 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1579
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1364 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1423
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1424 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1483
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1484 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1543
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1544 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1589
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1374 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1433
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1434 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1493
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1494 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1553
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1554 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1599
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1384 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1443
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1444 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1503
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1504 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1563
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1564 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1609
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1394 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1453
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1454 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1513
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1514 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1573
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1574 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1619
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1404 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1463
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1464 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1523
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1524 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1583
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1584 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1629
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1414 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1473
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1474 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1533
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1534 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1593
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1594 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1639
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1424 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1483
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1484 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1543
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1544 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1603
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1604 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1649
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1434 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1493
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1494 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1553
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1554 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1613
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1614 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1659
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1444 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1503
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1504 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1563
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1564 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1623
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1624 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1669
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1454 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1513
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1514 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1573
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1574 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1633
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1634 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1679
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1464 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1523
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1524 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1583
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1584 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1643
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1644 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1689
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1474 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1533
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1534 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1593
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1594 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1653
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1654 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1699
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1484 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1543
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1544 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1603
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1604 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1663
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1664 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1709
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 91/226 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1494 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1553
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1554 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1613
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1614 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1673
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1674 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1719
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 90/226 (39%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + C T + + C T L + C T + + C T + +
Sbjct: 924 CVTDSVSVVLCVTDCEPVVLCVTDSVSVVLCVTDSLHVVLCVTDSVSVVLCVTDSVSVVL 983
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 984 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1043
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1044 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1103
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1104 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1149
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 90/226 (39%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T + + C T + + C T + C T + + C T L + C T + +
Sbjct: 914 CVTDFVSVVLCVTDSVSVVLCVTDCEPVVLCVTDSVSVVLCVTDSLHVVLCVTDSVSVVL 973
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 974 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1033
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T + + C T + + C T + + C T + + C T + + C T + +
Sbjct: 1034 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVL 1093
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C T + + C T + + C T + + C T + + C T +
Sbjct: 1094 CVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSVSVVLCVTDSV 1139
>gi|260797156|ref|XP_002593570.1| hypothetical protein BRAFLDRAFT_88483 [Branchiostoma floridae]
gi|229278795|gb|EEN49581.1| hypothetical protein BRAFLDRAFT_88483 [Branchiostoma floridae]
Length = 287
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 91/249 (36%), Gaps = 11/249 (4%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G+ T G G+ T G G+ T G G+ T G G+ T G+ T
Sbjct: 11 AGVVTVETTGAGVETVETTGAGVVTVETTGAGVVTVETTGAGVVTVETTDAGVETMETTD 70
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
G+ T G+ T G G+ T G G+ T G G+ T G G+ T G
Sbjct: 71 AGVETVETTDAGVETVETTGAGVETVETTGAGVVTVETTGAGVETVETTGAGVVAVETTG 130
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT----GGLGLRNC 186
G+ T G+ T G+ T G G+ T G G+ T G G+ +
Sbjct: 131 AGVVTVETTDAGVETVETTDAGVETVETTGAGVVAVETTGAGVVTVETTGDRGEKGIADV 190
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT----GGLGLRNCNTGGLI 242
GG + + G+ T G G+ T G G+ T G G+ + GG
Sbjct: 191 TFGGNWVETTD---AGVETVETTGAGVETVETTGAGVVTVETTGDRGEKGIADVTFGGNW 247
Query: 243 VPKSKRGAQ 251
V + G +
Sbjct: 248 VETTDAGVE 256
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 84/231 (36%), Gaps = 11/231 (4%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
+G+ T G+ T G G+ T G G+ T G G+ T G G+ T
Sbjct: 1 MGVDWVGTTDAGVVTVETTGAGVETVETTGAGVVTVETTGAGVVTVETTGAGVVTVETTD 60
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
G+ T G+ T G+ T G G+ T G G+ T G G+ T G
Sbjct: 61 AGVETMETTDAGVETVETTDAGVETVETTGAGVETVETTGAGVVTVETTGAGVETVETTG 120
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT-- 198
G+ T G G+ T G+ T G+ T G G+ T G G+ T
Sbjct: 121 AGVVAVETTGAGVVTVETTDAGVETVETTDAGVETVETTGAGVVAVETTGAGVVTVETTG 180
Query: 199 --GGLGLRNCNTGG-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
G G+ + GG G+ T G G+ T G G+ T G
Sbjct: 181 DRGEKGIADVTFGGNWVETTDAGVETVETTGAGVETVETTGAGVVTVETTG 231
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 85/265 (32%), Gaps = 42/265 (15%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G+ T G G+ T G G+ T G G+ T G+ T G+ T
Sbjct: 21 AGVETVETTGAGVVTVETTGAGVVTVETTGAGVVTVETTDAGVETMETTDAGVETVETTD 80
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
G+ T G G+ T G G+ T G G+ T G G+ T G G+ T
Sbjct: 81 AGVETVETTGAGVETVETTGAGVVTVETTGAGVETVETTGAGVVAVETTGAGVVTVETTD 140
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-------------------- 170
G+ T G+ T G G+ T G G+ T G
Sbjct: 141 AGVETVETTDAGVETVETTGAGVVAVETTGAGVVTVETTGDRGEKGIADVTFGGNWVETT 200
Query: 171 -LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG---------------------LGLRNCNT 208
G+ T G G+ T G G+ T G G+ T
Sbjct: 201 DAGVETVETTGAGVETVETTGAGVVTVETTGDRGEKGIADVTFGGNWVETTDAGVETVET 260
Query: 209 GGLGLRNCNTGGLGLRNCNTGGLGL 233
G G+ T G G+ T G G+
Sbjct: 261 TGAGVETVETTGAGVVTVETTGAGV 285
>gi|440893796|gb|ELR46445.1| hypothetical protein M91_13311, partial [Bos grunniens mutus]
Length = 158
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 77/153 (50%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
+ C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 4 KRCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 63
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R+C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 64 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 123
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
R+C G LR+C G LR+C G LR+C
Sbjct: 124 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 156
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 77/153 (50%)
Query: 24 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 83
+ C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 4 KRCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 63
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
R+C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 64 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 123
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
R+C G LR+C G LR+C G LR+C
Sbjct: 124 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 156
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 77/153 (50%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
+ C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 4 KRCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 63
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
R+C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 64 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 123
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
R+C G LR+C G LR+C G LR+C
Sbjct: 124 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 156
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 77/153 (50%)
Query: 44 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 103
+ C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 4 KRCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 63
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 163
R+C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 64 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 123
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
R+C G LR+C G LR+C G LR+C
Sbjct: 124 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 156
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 77/153 (50%)
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
+ C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 4 KRCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 63
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
R+C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 64 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 123
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
R+C G LR+C G LR+C G LR+C
Sbjct: 124 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 156
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 77/153 (50%)
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 4 KRCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 63
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
R+C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 64 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 123
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
R+C G LR+C G LR+C G LR+C
Sbjct: 124 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 156
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 77/153 (50%)
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
+ C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 4 KRCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 63
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R+C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 64 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 123
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 226
R+C G LR+C G LR+C G LR+C
Sbjct: 124 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 156
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 77/153 (50%)
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
+ C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 4 KRCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 63
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
R+C G LR+C G LR+C G LR+C G LR+C G LR+C G L
Sbjct: 64 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 123
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
R+C G LR+C G LR+C G LR+C
Sbjct: 124 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 156
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 74/144 (51%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
LR+C G LR+C G LR+C G LR+C G LR+C G LR+C G
Sbjct: 13 LRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTH 72
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
LR+C G LR+C G LR+C G LR+C G LR+C G LR+C G
Sbjct: 73 LRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTH 132
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNC 156
LR+C G LR+C G LR+C
Sbjct: 133 LRSCAKVGTHLRSCAKVGTHLRSC 156
>gi|340376694|ref|XP_003386867.1| PREDICTED: copine-8-like [Amphimedon queenslandica]
Length = 741
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 82/206 (39%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
P + ++ GG G +GG G TGG G TGG G TGG G
Sbjct: 532 PPPLRAQQSFREGGPGQAPYPSGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPY 591
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 592 PSGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPY 651
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
TGG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 652 PTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGKAPY 711
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLG 212
T G G TGG G TGG G
Sbjct: 712 PTVGPGQAPYPTGGPGQAPYPTGGPG 737
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 85/213 (39%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
+KG++ ++ GG G +GG G TGG G TGG G TG
Sbjct: 525 SKGIKPNPPPLRAQQSFREGGPGQAPYPSGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTG 584
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G G +GG G TGG G TGG G TGG G TGG G TG
Sbjct: 585 GPGQAPYPSGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTG 644
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
G G TGG G TGG G TGG G TGG G TGG G TG
Sbjct: 645 GPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTG 704
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
G G T G G TGG G TGG G
Sbjct: 705 GPGKAPYPTVGPGQAPYPTGGPGQAPYPTGGPG 737
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 80/199 (40%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
++ GG G +GG G TGG G TGG G TGG G +GG G
Sbjct: 539 QSFREGGPGQAPYPSGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPSGGPGQ 598
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
TGG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 599 APYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQ 658
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
TGG G TGG G TGG G TGG G TGG G T G G
Sbjct: 659 APYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGKAPYPTVGPGQ 718
Query: 214 RNCNTGGLGLRNCNTGGLG 232
TGG G TGG G
Sbjct: 719 APYPTGGPGQAPYPTGGPG 737
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 79/197 (40%)
Query: 44 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 103
++ GG G +GG G TGG G TGG G TGG G +GG G
Sbjct: 539 QSFREGGPGQAPYPSGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPSGGPGQ 598
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 163
TGG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 599 APYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQ 658
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
TGG G TGG G TGG G TGG G TGG G T G G
Sbjct: 659 APYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGKAPYPTVGPGQ 718
Query: 224 RNCNTGGLGLRNCNTGG 240
TGG G TGG
Sbjct: 719 APYPTGGPGQAPYPTGG 735
>gi|119625498|gb|EAX05093.1| TBC1 domain family, member 9, isoform CRA_b [Homo sapiens]
Length = 441
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%)
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+ +R N + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 55 AYMCIRVYNAYFVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 114
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 218
+ +R CN + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 115 YIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 174
Query: 219 GGLGLRNCNTGGLGLRNCNTGGLIVP 244
+ +R CN + +R CN + +P
Sbjct: 175 YIVCIRVCNAYIVCIRVCNAYIVWMP 200
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+ +R N + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 55 AYMCIRVYNAYFVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 114
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+ +R CN + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 115 YIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 174
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGL 163
+ +R CN + +R CN + +
Sbjct: 175 YIVCIRVCNAYIVCIRVCNAYIVWM 199
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+ +R N + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 55 AYMCIRVYNAYFVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 114
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+ +R CN + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 115 YIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 174
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGL 173
+ +R CN + +R CN + +
Sbjct: 175 YIVCIRVCNAYIVCIRVCNAYIVWM 199
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
+ +R N + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 55 AYMCIRVYNAYFVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 114
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+ +R CN + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 115 YIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 174
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +R CN + +R CN + +
Sbjct: 175 YIVCIRVCNAYIVCIRVCNAYIVWM 199
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
+ +R N + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 55 AYMCIRVYNAYFVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 114
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+ +R CN + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 115 YIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 174
Query: 169 GGLGLRNCNTGGLGLRNCNTGGLGL 193
+ +R CN + +R CN + +
Sbjct: 175 YIVCIRVCNAYIVCIRVCNAYIVWM 199
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
+ +R N + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 55 AYMCIRVYNAYFVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 114
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ +R CN + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 115 YIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 174
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGL 203
+ +R CN + +R CN + +
Sbjct: 175 YIVCIRVCNAYIVCIRVCNAYIVWM 199
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+ +R N + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 55 AYMCIRVYNAYFVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 114
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 188
+ +R CN + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 115 YIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 174
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGL 213
+ +R CN + +R CN + +
Sbjct: 175 YIVCIRVCNAYIVCIRVCNAYIVWM 199
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+ +R N + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 55 AYMCIRVYNAYFVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 114
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+ +R CN + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 115 YIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 174
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGL 223
+ +R CN + +R CN + +
Sbjct: 175 YIVCIRVCNAYIVCIRVCNAYIVWM 199
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+ +R N + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 55 AYMCIRVYNAYFVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 114
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
+ +R CN + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 115 YIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNA 174
Query: 209 GGLGLRNCNTGGLGLRNCNTGGLGL 233
+ +R CN + +R CN + +
Sbjct: 175 YIVCIRVCNAYIVCIRVCNAYIVWM 199
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+R N + +R CN + +R CN + +R CN + +R CN + +R CN +
Sbjct: 59 IRVYNAYFVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVC 118
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+R CN + +R CN + +R CN + +R CN + +R CN + +R CN +
Sbjct: 119 IRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVC 178
Query: 133 LRNCNTGGLGLRNCNTGGLGL 153
+R CN + +R CN + +
Sbjct: 179 IRVCNAYIVCIRVCNAYIVWM 199
>gi|301617161|ref|XP_002938016.1| PREDICTED: hypothetical protein LOC100493501 [Xenopus (Silurana)
tropicalis]
Length = 227
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 91/183 (49%), Gaps = 12/183 (6%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 75
T L L + +G L L C++G L L C++G L L C +G L L + +G L L
Sbjct: 48 TLMLALWHSGSGTLMLALCHSGTLMLALCHSGTLMLALCLSGTLMLALSHSGSGTLMLAL 107
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 133
C++G L L C++G L L C +G L L C++G L L C +G L LR+ L L
Sbjct: 108 CHSGTLMLALCHSGTLMLALCLSGTLMLALCHSGTLMLALCLSGTLMLALRHSYVSTLAL 167
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R+ G L LR+ G L LR+ G L LR LR+ G L LR G L L
Sbjct: 168 RHSYVGTLSLRHSYVGTLSLRHSYVGTLALR--------LRHSYVGTLSLRLSYVGTLSL 219
Query: 194 RNC 196
R+C
Sbjct: 220 RHC 222
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 89/179 (49%), Gaps = 12/179 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 69
L + +G L L C++G L L C++G L L C +G L L + +G L L C++G
Sbjct: 52 ALWHSGSGTLMLALCHSGTLMLALCHSGTLMLALCLSGTLMLALSHSGSGTLMLALCHSG 111
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 127
L L C++G L L C +G L L C++G L L C +G L LR+ L LR+
Sbjct: 112 TLMLALCHSGTLMLALCLSGTLMLALCHSGTLMLALCLSGTLMLALRHSYVSTLALRHSY 171
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G L LR+ G L LR+ G L LR LR+ G L LR G L LR+C
Sbjct: 172 VGTLSLRHSYVGTLSLRHSYVGTLALR--------LRHSYVGTLSLRLSYVGTLSLRHC 222
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 93/192 (48%), Gaps = 10/192 (5%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGG----LGLRNCNTGGLGLRNCNTGG--LGLRNC 106
L + T L L + G L LR G L L C +G L L ++G L L C
Sbjct: 7 LSHFGTLMLALCHSYVGTLSLRLSYVGTPSGTLMLALCLSGTLMLALWHSGSGTLMLALC 66
Query: 107 NTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
++G L L C++G L L C +G L L + +G L L C++G L L C++G L L
Sbjct: 67 HSGTLMLALCHSGTLMLALCLSGTLMLALSHSGSGTLMLALCHSGTLMLALCHSGTLMLA 126
Query: 165 NCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
C +G L L C++G L L C +G L LR+ L LR+ G L LR+ G L
Sbjct: 127 LCLSGTLMLALCHSGTLMLALCLSGTLMLALRHSYVSTLALRHSYVGTLSLRHSYVGTLS 186
Query: 223 LRNCNTGGLGLR 234
LR+ G L LR
Sbjct: 187 LRHSYVGTLALR 198
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 76/165 (46%), Gaps = 8/165 (4%)
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGG----LGLRNCNTGGLGLRNCNTGG--LGLRNC 156
L + T L L + G L LR G L L C +G L L ++G L L C
Sbjct: 7 LSHFGTLMLALCHSYVGTLSLRLSYVGTPSGTLMLALCLSGTLMLALWHSGSGTLMLALC 66
Query: 157 NTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
++G L L C++G L L C +G L L + +G L L C++G L L C++G L L
Sbjct: 67 HSGTLMLALCHSGTLMLALCLSGTLMLALSHSGSGTLMLALCHSGTLMLALCHSGTLMLA 126
Query: 215 NCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSEN 259
C +G L L C++G L L C +G L++ A R
Sbjct: 127 LCLSGTLMLALCHSGTLMLALCLSGTLMLALRHSYVSTLALRHSY 171
>gi|156334861|ref|XP_001619542.1| hypothetical protein NEMVEDRAFT_v1g3160 [Nematostella vectensis]
gi|156202977|gb|EDO27442.1| predicted protein [Nematostella vectensis]
Length = 197
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNC 76
LG N + LG N LG N + LG+ N ++ LG R+ + LG+ N
Sbjct: 1 LGAHNTGSPSLGAHNTGNPSLGAHNTGSPSLGVHNTDSPSLGARDYIIVLMSPSLGVHNT 60
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
++ LG N + LG N ++ LG N ++ LG N ++ LG N ++ LG N
Sbjct: 61 DSPSLGAHNTGSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNT 120
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
+ LG N + LG N + LG N ++ LG + NTG L NTG L L
Sbjct: 121 GSPSLGAHNTGSLSLGAHNTGSPSLGAHNTDSPSLGAPH-NTGSPSLGAHNTGSLSLGAH 179
Query: 197 NTG--GLGLRNCNTGGLG 212
NTG LG N ++ LG
Sbjct: 180 NTGSPSLGAHNTDSPSLG 197
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNC 86
LG N + LG N LG N + LG+ N ++ LG R+ + LG+ N
Sbjct: 1 LGAHNTGSPSLGAHNTGNPSLGAHNTGSPSLGVHNTDSPSLGARDYIIVLMSPSLGVHNT 60
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
++ LG N + LG N ++ LG N ++ LG N ++ LG N ++ LG N
Sbjct: 61 DSPSLGAHNTGSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNT 120
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
+ LG N + LG N + LG N ++ LG + NTG L NTG L L
Sbjct: 121 GSPSLGAHNTGSLSLGAHNTGSPSLGAHNTDSPSLGAPH-NTGSPSLGAHNTGSLSLGAH 179
Query: 207 NTG--GLGLRNCNTGGLG 222
NTG LG N ++ LG
Sbjct: 180 NTGSPSLGAHNTDSPSLG 197
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNC 96
LG N + LG N LG N + LG+ N ++ LG R+ + LG+ N
Sbjct: 1 LGAHNTGSPSLGAHNTGNPSLGAHNTGSPSLGVHNTDSPSLGARDYIIVLMSPSLGVHNT 60
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
++ LG N + LG N ++ LG N ++ LG N ++ LG N ++ LG N
Sbjct: 61 DSPSLGAHNTGSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNT 120
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
+ LG N + LG N + LG N ++ LG + NTG L NTG L L
Sbjct: 121 GSPSLGAHNTGSLSLGAHNTGSPSLGAHNTDSPSLGAPH-NTGSPSLGAHNTGSLSLGAH 179
Query: 217 NTG--GLGLRNCNTGGLG 232
NTG LG N ++ LG
Sbjct: 180 NTGSPSLGAHNTDSPSLG 197
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 90/197 (45%), Gaps = 7/197 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNC 106
LG N + LG N LG N + LG+ N ++ LG R+ + LG+ N
Sbjct: 1 LGAHNTGSPSLGAHNTGNPSLGAHNTGSPSLGVHNTDSPSLGARDYIIVLMSPSLGVHNT 60
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
++ LG N + LG N ++ LG N ++ LG N ++ LG N ++ LG N
Sbjct: 61 DSPSLGAHNTGSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNT 120
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 226
+ LG N + LG N + LG N ++ LG + NTG L NTG L L
Sbjct: 121 GSPSLGAHNTGSLSLGAHNTGSPSLGAHNTDSPSLGAPH-NTGSPSLGAHNTGSLSLGAH 179
Query: 227 NTG--GLGLRNCNTGGL 241
NTG LG N ++ L
Sbjct: 180 NTGSPSLGAHNTDSPSL 196
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCN 67
G N + LG N LG N + LG+ N ++ LG R+ + LG+ N +
Sbjct: 2 GAHNTGSPSLGAHNTGNPSLGAHNTGSPSLGVHNTDSPSLGARDYIIVLMSPSLGVHNTD 61
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
+ LG N + LG N ++ LG N ++ LG N ++ LG N ++ LG N
Sbjct: 62 SPSLGAHNTGSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTG 121
Query: 128 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
+ LG N TG L L NTG LG N ++ LG + NTG L NTG L L
Sbjct: 122 SPSLGAHN--TGSLSLGAHNTGSPSLGAHNTDSPSLGAPH-NTGSPSLGAHNTGSLSLGA 178
Query: 186 CNTG--GLGLRNCNTGGLG 202
NTG LG N ++ LG
Sbjct: 179 HNTGSPSLGAHNTDSPSLG 197
>gi|432949432|ref|XP_004084207.1| PREDICTED: kinesin-like protein KIF16B-like, partial [Oryzias
latipes]
Length = 492
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 10/200 (5%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
N GL + +C GL + +C G +GL +C GL + +C G +GL +C GL + +C
Sbjct: 303 NQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLDVASC--GQMGLASCGQMGLVVASC 358
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
GL + +C GL + +C G +GL ++G +GL +C GL + +C G +GL +C
Sbjct: 359 GQMGLDVASCGQMGLVVASC--GQMGLDVASSGQMGLASCGQMGLDVASC--GQMGLASC 414
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
GL + +C GL + +C GL + +C GL + +C G +GL +C GL + +C
Sbjct: 415 GQMGLDVASCGQMGLDVASCGQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLVVASC 472
Query: 197 NTGGLGLRNCNTGGLGLRNC 216
GL + +C GL + +C
Sbjct: 473 GQMGLDVASCGQMGLDVASC 492
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 10/200 (5%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 86
N GL + +C GL + +C G +GL +C GL + +C G +GL +C GL + +C
Sbjct: 303 NQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLDVASC--GQMGLASCGQMGLVVASC 358
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
GL + +C GL + +C G +GL ++G +GL +C GL + +C G +GL +C
Sbjct: 359 GQMGLDVASCGQMGLVVASC--GQMGLDVASSGQMGLASCGQMGLDVASC--GQMGLASC 414
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
GL + +C GL + +C GL + +C GL + +C G +GL +C GL + +C
Sbjct: 415 GQMGLDVASCGQMGLDVASCGQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLVVASC 472
Query: 207 NTGGLGLRNCNTGGLGLRNC 226
GL + +C GL + +C
Sbjct: 473 GQMGLDVASCGQMGLDVASC 492
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 10/200 (5%)
Query: 37 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 96
N GL + +C GL + +C G +GL +C GL + +C G +GL +C GL + +C
Sbjct: 303 NQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLDVASC--GQMGLASCGQMGLVVASC 358
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
GL + +C GL + +C G +GL ++G +GL +C GL + +C G +GL +C
Sbjct: 359 GQMGLDVASCGQMGLVVASC--GQMGLDVASSGQMGLASCGQMGLDVASC--GQMGLASC 414
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
GL + +C GL + +C GL + +C GL + +C G +GL +C GL + +C
Sbjct: 415 GQMGLDVASCGQMGLDVASCGQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLVVASC 472
Query: 217 NTGGLGLRNCNTGGLGLRNC 236
GL + +C GL + +C
Sbjct: 473 GQMGLDVASCGQMGLDVASC 492
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 47 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 106
N GL + +C GL + +C G +GL +C GL + +C G +GL +C GL + +C
Sbjct: 303 NQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLDVASC--GQMGLASCGQMGLVVASC 358
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
GL + +C GL + +C G +GL ++G +GL +C GL + +C G +GL +C
Sbjct: 359 GQMGLDVASCGQMGLVVASC--GQMGLDVASSGQMGLASCGQMGLDVASC--GQMGLASC 414
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 226
GL + +C GL + +C GL + +C GL + +C G +GL +C GL + +C
Sbjct: 415 GQMGLDVASCGQMGLDVASCGQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLVVASC 472
Query: 227 NTGGLGLRNCNTGGLIV 243
GL + +C GL V
Sbjct: 473 GQMGLDVASCGQMGLDV 489
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL + G +GL + G +GL +C GL + +C G +GL +C GL + +C GL
Sbjct: 306 GLDVASCGQMGLDVASCGQMGLASCGQMGLDVASC--GQMGLASCGQMGLVVASCGQMGL 363
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
+ +C GL + +C G +GL ++G +GL +C GL + +C G +GL +C GL
Sbjct: 364 DVASCGQMGLVVASC--GQMGLDVASSGQMGLASCGQMGLDVASC--GQMGLASCGQMGL 419
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ +C GL + +C GL + +C GL + +C G +GL +C GL + +C GL
Sbjct: 420 DVASCGQMGLDVASCGQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLVVASCGQMGL 477
Query: 192 GLRNCNTGGLGLRNC 206
+ +C GL + +C
Sbjct: 478 DVASCGQMGLDVASC 492
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
+VA GL + G +GL + G +GL ++G +GL +C GL + +C G +GL
Sbjct: 354 VVASCGQMGLDVASCGQMGLVVASCGQMGLDVASSGQMGLASCGQMGLDVASC--GQMGL 411
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+C GL + +C GL + +C GL + +C GL + +C G +GL +C GL +
Sbjct: 412 ASCGQMGLDVASCGQMGLDVASCGQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLVV 469
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC 146
+C GL + +C GL + +C
Sbjct: 470 ASCGQMGLDVASCGQMGLDVASC 492
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
N GL + +C GL + +C G +GL +C GL + +C G +GL +C GL + +C
Sbjct: 303 NQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLDVASC--GQMGLASCGQMGLVVASC 358
Query: 217 NTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
GL + +C GL + +C GL V S
Sbjct: 359 GQMGLDVASCGQMGLVVASCGQMGLDVASS 388
>gi|406604148|emb|CCH44371.1| Actin cytoskeleton-regulatory complex protein [Wickerhamomyces
ciferrii]
Length = 1215
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 107/233 (45%), Gaps = 25/233 (10%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGL-----GLRNCNTGGLGLRNC 56
PIST L N G +N +T GL G +N +T GL G +N +T GL +
Sbjct: 328 PISTPSL---NQQPTGFQNQSTSGLTQQPTGFQNQSTTGLTQQPTGFQNQSTTGLTQQP- 383
Query: 57 NTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLG--LRNCNTGGLGLRNCNTGGLGL 113
TG + L+ TG L+ TG + L TG G L + TGG L+ TG + L
Sbjct: 384 -TGLIPLKTQGTGAAPSLQQQPTGLVPLNTQQTGTAGNTLAHQQTGGQPLQQQPTGLVPL 442
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTG 169
+ NTGG L+ TG + ++N NTGG L TG + LRN TG ++ TG
Sbjct: 443 QGQNTGGQPLKQQPTGLIPIKNQNTGGAPLTQQPTGLVPLRNQQTGSAPISAPIQQTPTG 502
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLGLRNCNTG 219
G L TG + L TG + L+ TG L++ TG LR TG
Sbjct: 503 GAPLTQQPTGLVPLTTTATGSVALQTQLTGPAPLQSQRTGFGNFEPLRQQKTG 555
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 89/192 (46%), Gaps = 21/192 (10%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGL-----GLRNCNTGGLGLRNCNTG 119
+ + N G +N +T GL G +N +T GL G +N +T GL + TG
Sbjct: 328 PISTPSLNQQPTGFQNQSTSGLTQQPTGFQNQSTTGLTQQPTGFQNQSTTGLTQQP--TG 385
Query: 120 GLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLG--LRNCNTGGLGLRNCNTGGLGLRNC 176
+ L+ TG L+ TG + L TG G L + TGG L+ TG + L+
Sbjct: 386 LIPLKTQGTGAAPSLQQQPTGLVPLNTQQTGTAGNTLAHQQTGGQPLQQQPTGLVPLQGQ 445
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLG 232
NTGG L+ TG + ++N NTGG L TG + LRN TG ++ TGG
Sbjct: 446 NTGGQPLKQQPTGLIPIKNQNTGGAPLTQQPTGLVPLRNQQTGSAPISAPIQQTPTGGAP 505
Query: 233 LRNCNTGGLIVP 244
L TG +VP
Sbjct: 506 LTQQPTG--LVP 515
>gi|390367593|ref|XP_001181887.2| PREDICTED: cleavage stimulation factor subunit 2-like
[Strongylocentrotus purpuratus]
Length = 618
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 109/209 (52%), Gaps = 8/209 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR------NCNTGGLGLRNCNTG 69
N G +G R G+G ++ GG+G ++ N G R + N GG+G + N G
Sbjct: 185 MNQGSMGPRGMGPQGMGHQDMGRGGMGPQDRNMQGGMQRGGMGPGDMNRGGMGQGDMNRG 244
Query: 70 GLGLRNCNTGGLGL-RNCNTGGLGL-RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G+G + N GG+G N N GG+G N + GG+G N GG+G N GG+G N
Sbjct: 245 GMGQGDMNRGGMGPGDNMNRGGMGPGDNMSRGGMGQGETNRGGMGPGEMNRGGMGQGEAN 304
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
GG+G N G +G + N GG+G + GG+G + N G+G + + GG+G +
Sbjct: 305 RGGMGPGEGNRGNMGQSDMNRGGMGPGDMGRGGMGPGDMNRSGMGPGDMSRGGMGPGDMG 364
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
GG+G + N GG+G + N GG+G ++
Sbjct: 365 RGGMGPGDMNRGGMGPGDMNRGGMGQQDT 393
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 109/209 (52%), Gaps = 8/209 (3%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR------NCNTGGLGLRNCNTG 89
N G +G R G+G ++ GG+G ++ N G R + N GG+G + N G
Sbjct: 185 MNQGSMGPRGMGPQGMGHQDMGRGGMGPQDRNMQGGMQRGGMGPGDMNRGGMGQGDMNRG 244
Query: 90 GLGLRNCNTGGLGL-RNCNTGGLGL-RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
G+G + N GG+G N N GG+G N + GG+G N GG+G N GG+G N
Sbjct: 245 GMGQGDMNRGGMGPGDNMNRGGMGPGDNMSRGGMGQGETNRGGMGPGEMNRGGMGQGEAN 304
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
GG+G N G +G + N GG+G + GG+G + N G+G + + GG+G +
Sbjct: 305 RGGMGPGEGNRGNMGQSDMNRGGMGPGDMGRGGMGPGDMNRSGMGPGDMSRGGMGPGDMG 364
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
GG+G + N GG+G + N GG+G ++
Sbjct: 365 RGGMGPGDMNRGGMGPGDMNRGGMGQQDT 393
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 2/164 (1%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGL-RNCNTGGLGLRNCNTGGLG 72
+ N GG+G + N GG+G + N GG+G N N GG+G N + GG+G N GG+G
Sbjct: 230 DMNRGGMGQGDMNRGGMGQGDMNRGGMGPGDNMNRGGMGPGDNMSRGGMGQGETNRGGMG 289
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
N GG+G N GG+G N G +G + N GG+G + GG+G + N G+G
Sbjct: 290 PGEMNRGGMGQGEANRGGMGPGEGNRGNMGQSDMNRGGMGPGDMGRGGMGPGDMNRSGMG 349
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
+ + GG+G + GG+G + N GG+G + N GG+G ++
Sbjct: 350 PGDMSRGGMGPGDMGRGGMGPGDMNRGGMGPGDMNRGGMGQQDT 393
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR------NCNTGGLGLRNCNTG 109
N G +G R G+G ++ GG+G ++ N G R + N GG+G + N G
Sbjct: 185 MNQGSMGPRGMGPQGMGHQDMGRGGMGPQDRNMQGGMQRGGMGPGDMNRGGMGQGDMNRG 244
Query: 110 GLGLRNCNTGGLGL-RNCNTGGLGL-RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+G + N GG+G N N GG+G N + GG+G N GG+G N GG+G N
Sbjct: 245 GMGQGDMNRGGMGPGDNMNRGGMGPGDNMSRGGMGQGETNRGGMGPGEMNRGGMGQGEAN 304
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
GG+G N G +G + N GG+G + GG+G + N G+G + + GG+G +
Sbjct: 305 RGGMGPGEGNRGNMGQSDMNRGGMGPGDMGRGGMGPGDMNRSGMGPGDMSRGGMGPGDMG 364
Query: 228 TGGLGLRNCNTGGL 241
GG+G + N GG+
Sbjct: 365 RGGMGPGDMNRGGM 378
>gi|340373663|ref|XP_003385360.1| PREDICTED: mucin-19-like [Amphimedon queenslandica]
Length = 1097
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 89/235 (37%), Gaps = 2/235 (0%)
Query: 12 GLRNCNT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL+ T G+ L N GL L N G+ N GL L N G+ N
Sbjct: 665 GLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFTGTNQS 724
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL L N G+ N GL L N GL L N GL L N G+ N
Sbjct: 725 GLQLTGTNQSGVPFPGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQS 784
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
GL L N GL L N G+ N GL L N GL L N G+ L N
Sbjct: 785 GLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQSGVPLTGTNQT 844
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
GL L N GL L N G+ N GL L N GL L N G+ P
Sbjct: 845 GLQLTGTNQSGLQLTGINQSGVPFPGTNQSGLQLTGTNQSGLQLTGINQSGVPFP 899
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 88/228 (38%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N GL L N GL L N GL L N GL L N GL L N GL L
Sbjct: 371 TNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTR 430
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N G+ L N GL L N GL L N G+ L N GL L N GL L
Sbjct: 431 TNQSGVPLTRTNQSGLQLTGTNQSGLKLTGTNQSGIQLSGTNQSGLQLTGTNQSGLQLTG 490
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
N G+ N GL L N GL N GL L N G+ L N GL L
Sbjct: 491 TNQSGVPFTGTNQSGLQLTGTNQSGLQFAGTNQSGLQLTGTNQSGVPLTGTNQTGLQL-- 548
Query: 196 CNTGGLGLR--NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL+ N G+ N GL L N GL L N GL
Sbjct: 549 TGTNQFGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQPGL 596
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 87/225 (38%), Gaps = 4/225 (1%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
GL L N GL L N GL L N GL L N GL L N GL L N
Sbjct: 364 SGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQ 423
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
GL L N G+ L N GL L N GL L N G+ L N GL L N
Sbjct: 424 SGLQLTRTNQSGVPLTRTNQSGLQLTGTNQSGLKLTGTNQSGIQLSGTNQSGLQLTGTNQ 483
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
GL L N G+ N GL L N GL N GL L N G+ L N
Sbjct: 484 SGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQFAGTNQSGLQLTGTNQSGVPLTGTNQ 543
Query: 199 GGLGLRNCNTGGLGLR--NCNTGGLGLRNCNTGGLGLRNCNTGGL 241
GL L T GL+ N G+ N GL L N GL
Sbjct: 544 TGLQL--TGTNQFGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGL 586
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 88/232 (37%), Gaps = 2/232 (0%)
Query: 12 GLRNCNT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL+ T GL L N G+ L N GL L N G+ N GL L N
Sbjct: 655 GLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGVPFTGTNQSGLQLTGTNQS 714
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G+ N GL L N G+ N GL L N GL L N GL L N
Sbjct: 715 GVPFTGTNQSGLQLTGTNQSGVPFPGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQS 774
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
G+ N GL L N GL L N G+ N GL L N GL L N
Sbjct: 775 GVPFTGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQS 834
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ L N GL L N GL L N G+ N GL L N GL
Sbjct: 835 GVPLTGTNQTGLQLTGTNQSGLQLTGINQSGVPFPGTNQSGLQLTGTNQSGL 886
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 84/226 (37%), Gaps = 2/226 (0%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G+ N GL L N G+ N GL L N G+ N GL L
Sbjct: 691 TNQSGVPFTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFPGTNQSGLQLTG 750
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N GL L N GL L N G+ N GL L N GL L N G+
Sbjct: 751 TNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTG 810
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
N GL L N GL L N G+ L N GL L N GL L N G+
Sbjct: 811 TNQSGLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGLQLTGINQSGVPFPG 870
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N GL L N GL L N G+ N GL L + GL
Sbjct: 871 TNQSGLQLTGTNQSGLQLTGINQSGVPFPGTNQSGLQL--TSQSGL 914
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 86/224 (38%), Gaps = 4/224 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N GL L N GL L N GL L N GL L N G+ L N GL L
Sbjct: 391 TNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTRTNQSGVPLTRTNQSGLQLTG 450
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N GL L N G+ L N GL L N GL L N G+ N GL L
Sbjct: 451 TNQSGLKLTGTNQSGIQLSGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTG 510
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--NCNTGGLGL 193
N GL N GL L N G+ L N GL L T GL+ N G+
Sbjct: 511 TNQSGLQFAGTNQSGLQLTGTNQSGVPLTGTNQTGLQL--TGTNQFGLQLTGTNQSGVPF 568
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
N GL L N GL L N GL L N GL L N
Sbjct: 569 TGTNQSGLQLTGTNQSGLQLTGTNQPGLQLTGTNQTGLQLTGTN 612
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 81/218 (37%), Gaps = 2/218 (0%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N GL L N G+ N GL L N G+ N GL L N GL L
Sbjct: 701 TNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFPGTNQSGLQLTGTNQSGLQLTG 760
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N GL L N G+ N GL L N GL L N G+ N GL L
Sbjct: 761 TNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTG 820
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
N GL L N G+ L N GL L N GL L N G+ N GL L
Sbjct: 821 TNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGLQLTGINQSGVPFPGTNQSGLQLTG 880
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
N GL L N G+ N GL L + GL
Sbjct: 881 TNQSGLQLTGINQSGVPFPGTNQSGLQL--TSQSGLQF 916
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 87/228 (38%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N GL L N GL L N GL L N G+ L N GL L N GL L
Sbjct: 401 TNQSGLQLTGTNQSGLQLTGTNQSGLQLTRTNQSGVPLTRTNQSGLQLTGTNQSGLKLTG 460
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N G+ L N GL L N GL L N G+ N GL L N GL
Sbjct: 461 TNQSGIQLSGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQFAG 520
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--NCNTGGLGLRNCNTGGLGL 193
N GL L N G+ L N GL L T GL+ N G+ N GL L
Sbjct: 521 TNQSGLQLTGTNQSGVPLTGTNQTGLQL--TGTNQFGLQLTGTNQSGVPFTGTNQSGLQL 578
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N GL L N GL L N GL L N L L N G+
Sbjct: 579 TGTNQSGLQLTGTNQPGLQLTGTNQTGLQLTGTNQSRLQLTGTNQSGV 626
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 82/215 (38%), Gaps = 2/215 (0%)
Query: 32 GLR--NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
GL+ N GL L N G+ L N GL L N G+ N GL L N
Sbjct: 655 GLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGVPFTGTNQSGLQLTGTNQS 714
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G+ N GL L N G+ N GL L N GL L N GL L N
Sbjct: 715 GVPFTGTNQSGLQLTGTNQSGVPFPGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQS 774
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
G+ N GL L N GL L N G+ N GL L N GL L N
Sbjct: 775 GVPFTGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQS 834
Query: 210 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
G+ L N GL L N GL L N G+ P
Sbjct: 835 GVPLTGTNQTGLQLTGTNQSGLQLTGINQSGVPFP 869
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 85/228 (37%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N GL L N GL L N G+ L N GL L N GL L N G+ L
Sbjct: 411 TNQSGLQLTGTNQSGLQLTRTNQSGVPLTRTNQSGLQLTGTNQSGLKLTGTNQSGIQLSG 470
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N GL L N GL L N G+ N GL L N GL N GL L
Sbjct: 471 TNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQFAGTNQSGLQLTG 530
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLR--NCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N G+ L N GL L T GL+ N G+ N GL L N GL L
Sbjct: 531 TNQSGVPLTGTNQTGLQL--TGTNQFGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQL 588
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N GL L N GL L N L L N G+ N L
Sbjct: 589 TGTNQPGLQLTGTNQTGLQLTGTNQSRLQLTGTNQSGVPFTGTNQSSL 636
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 87/232 (37%), Gaps = 2/232 (0%)
Query: 12 GLRNCNTGGLGLR--NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL+ T GL+ N G+ N GL L N GL L N GL L N
Sbjct: 545 GLQLTGTNQFGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQPGLQLTGTNQT 604
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL L N L L N G+ N L L N G+ L N GL L N
Sbjct: 605 GLQLTGTNQSRLQLTGTNQSGVPFTGTNQSSLQLTGTNQSGVPLTGTNQTGLQLTGTNQS 664
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
GL L N G+ L N GL L N G+ N GL L N G+ N
Sbjct: 665 GLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFTGTNQS 724
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
GL L N G+ N GL L N GL L N GL L N G+
Sbjct: 725 GLQLTGTNQSGVPFPGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGV 776
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 86/232 (37%), Gaps = 2/232 (0%)
Query: 12 GLRNCNT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL+ T GL L N L L N G+ N L L N G+ L N
Sbjct: 595 GLQLTGTNQTGLQLTGTNQSRLQLTGTNQSGVPFTGTNQSSLQLTGTNQSGVPLTGTNQT 654
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL L N GL L N G+ L N GL L N G+ N GL L N
Sbjct: 655 GLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGVPFTGTNQSGLQLTGTNQS 714
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
G+ N GL L N G+ N GL L N GL L N GL L N
Sbjct: 715 GVPFTGTNQSGLQLTGTNQSGVPFPGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQS 774
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N GL L N GL L N G+ N GL L N GL
Sbjct: 775 GVPFTGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGL 826
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 85/228 (37%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N GL L N G+ L N GL L N GL L N G+ L N GL L
Sbjct: 421 TNQSGLQLTRTNQSGVPLTRTNQSGLQLTGTNQSGLKLTGTNQSGIQLSGTNQSGLQLTG 480
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N GL L N G+ N GL L N GL N GL L N G+ L
Sbjct: 481 TNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQFAGTNQSGLQLTGTNQSGVPLTG 540
Query: 136 CNTGGLGLRNCNTGGLGLR--NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N GL L T GL+ N G+ N GL L N GL L N GL L
Sbjct: 541 TNQTGLQL--TGTNQFGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQPGLQL 598
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N GL L N L L N G+ N L L N G+
Sbjct: 599 TGTNQTGLQLTGTNQSRLQLTGTNQSGVPFTGTNQSSLQLTGTNQSGV 646
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 86/231 (37%), Gaps = 4/231 (1%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
L N GL L N GL L N G+ L N GL L N GL L N G+
Sbjct: 438 LTRTNQSGLQLTGTNQSGLKLTGTNQSGIQLSGTNQSGLQLTGTNQSGLQLTGTNQSGVP 497
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
N GL L N GL N GL L N G+ L N GL L T G
Sbjct: 498 FTGTNQSGLQLTGTNQSGLQFAGTNQSGLQLTGTNQSGVPLTGTNQTGLQL--TGTNQFG 555
Query: 133 LR--NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
L+ N G+ N GL L N GL L N GL L N GL L N
Sbjct: 556 LQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQPGLQLTGTNQTGLQLTGTNQSR 615
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
L L N G+ N L L N G+ L N GL L N GL
Sbjct: 616 LQLTGTNQSGVPFTGTNQSSLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGL 666
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 85/228 (37%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLR--NCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
N L L N G+ L N GL+ N GL L N G+ L N GL L
Sbjct: 631 TNQSSLQLTGTNQSGVPLTGTN--QTGLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQL 688
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
N G+ N GL L N G+ N GL L N G+ N GL L
Sbjct: 689 TGTNQSGVPFTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFPGTNQSGLQL 748
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N GL L N GL L N G+ N GL L N GL L N G+
Sbjct: 749 TGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQSGVPF 808
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N GL L N GL L N G+ L N GL L N GL
Sbjct: 809 TGTNQSGLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGL 856
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 85/231 (36%), Gaps = 4/231 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--NCNTGGLGL 73
N GL N GL L N G+ L N GL L T GL+ N G+
Sbjct: 511 TNQSGLQFAGTNQSGLQLTGTNQSGVPLTGTNQTGLQL--TGTNQFGLQLTGTNQSGVPF 568
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
N GL L N GL L N GL L N GL L N L L N G+
Sbjct: 569 TGTNQSGLQLTGTNQSGLQLTGTNQPGLQLTGTNQTGLQLTGTNQSRLQLTGTNQSGVPF 628
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N L L N G+ L N GL L N GL L N G+ L N GL L
Sbjct: 629 TGTNQSSLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQL 688
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
N G+ N GL L N G+ N GL L N G+ P
Sbjct: 689 TGTNQSGVPFTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFP 739
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 85/228 (37%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G+ L N GL L N GL L N G+ N GL L N GL
Sbjct: 461 TNQSGIQLSGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQFAG 520
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--NCNTGGLGLRNCNTGGLGL 133
N GL L N G+ L N GL L T GL+ N G+ N GL L
Sbjct: 521 TNQSGLQLTGTNQSGVPLTGTNQTGLQL--TGTNQFGLQLTGTNQSGVPFTGTNQSGLQL 578
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N GL L N GL L N GL L N L L N G+ N L L
Sbjct: 579 TGTNQSGLQLTGTNQPGLQLTGTNQTGLQLTGTNQSRLQLTGTNQSGVPFTGTNQSSLQL 638
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N G+ L N GL L N GL L N G+ L N GL
Sbjct: 639 TGTNQSGVPLTGTNQTGLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGL 686
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 84/228 (36%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT--GGLGLRNCNTGGLGLRNCNTGGLGL 73
N GL L N GL L N GL L T GL L N L L N G+
Sbjct: 571 TNQSGLQLTGTNQSGLQLTGTNQPGLQL--TGTNQTGLQLTGTNQSRLQLTGTNQSGVPF 628
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
N L L N G+ L N GL L N GL L N G+ L N GL L
Sbjct: 629 TGTNQSSLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQL 688
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N G+ N GL L N G+ N GL L N G+ N GL L
Sbjct: 689 TGTNQSGVPFTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFPGTNQSGLQL 748
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N GL L N GL L N G+ N GL L N GL
Sbjct: 749 TGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGL 796
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 85/228 (37%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N GL L N GL L N G+ N GL L N GL N GL L
Sbjct: 471 TNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQFAGTNQSGLQLTG 530
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLR--NCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
N G+ L N GL L T GL+ N G+ N GL L N GL L
Sbjct: 531 TNQSGVPLTGTNQTGLQL--TGTNQFGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQL 588
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N GL L N GL L N L L N G+ N L L N G+ L
Sbjct: 589 TGTNQPGLQLTGTNQTGLQLTGTNQSRLQLTGTNQSGVPFTGTNQSSLQLTGTNQSGVPL 648
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N GL L N GL L N G+ L N GL L N G+
Sbjct: 649 TGTNQTGLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGV 696
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 84/228 (36%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
N GL L N GL L T GL L N L L N G+ N L L
Sbjct: 581 TNQSGLQLTGTNQPGLQL--TGTNQTGLQLTGTNQSRLQLTGTNQSGVPFTGTNQSSLQL 638
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
N G+ L N GL L N GL L N G+ L N GL L N G+
Sbjct: 639 TGTNQSGVPLTGTNQTGLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGVPF 698
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N GL L N G+ N GL L N G+ N GL L N GL L
Sbjct: 699 TGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFPGTNQSGLQLTGTNQSGLQL 758
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N GL L N G+ N GL L N GL L N G+
Sbjct: 759 TGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQSGV 806
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 85/236 (36%), Gaps = 10/236 (4%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLR--N 65
N GL L N L L N G+ N L L N G+ GL+
Sbjct: 601 TNQTGLQLTGTNQSRLQLTGTNQSGVPFTGTNQSSLQLTGTNQSGVPLTGTNQTGLQLTG 660
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
N GL L N G+ L N GL L N G+ N GL L N G+
Sbjct: 661 TNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFTG 720
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N GL L N G+ N GL L N GL L N GL L N G+
Sbjct: 721 TNQSGLQLTGTNQSGVPFPGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTG 780
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N GL L N GL L N G+ N GL L N GL L N G+
Sbjct: 781 TNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQSGV 836
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 84/228 (36%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G+ N GL L N GL N GL L N G+ L N GL L
Sbjct: 491 TNQSGVPFTGTNQSGLQLTGTNQSGLQFAGTNQSGLQLTGTNQSGVPLTGTNQTGLQL-- 548
Query: 76 CNTGGLGLR--NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
T GL+ N G+ N GL L N GL L N GL L N GL L
Sbjct: 549 TGTNQFGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQPGLQLTGTNQTGLQL 608
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N L L N G+ N L L N G+ L N GL L N GL L
Sbjct: 609 TGTNQSRLQLTGTNQSGVPFTGTNQSSLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGLQL 668
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N G+ L N GL L N G+ N GL L N G+
Sbjct: 669 TGTNQSGVPLTGTNQTGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGV 716
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 84/228 (36%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--NCNTGGLGLRNCNTGGLGL 73
N GL L N G+ L N GL L T GL+ N G+ N GL L
Sbjct: 521 TNQSGLQLTGTNQSGVPLTGTNQTGLQL--TGTNQFGLQLTGTNQSGVPFTGTNQSGLQL 578
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
N GL L N GL L N GL L N L L N G+ N L L
Sbjct: 579 TGTNQSGLQLTGTNQPGLQLTGTNQTGLQLTGTNQSRLQLTGTNQSGVPFTGTNQSSLQL 638
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N G+ L N GL L N GL L N G+ L N GL L N G+
Sbjct: 639 TGTNQSGVPLTGTNQTGLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGVPF 698
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N GL L N G+ N GL L N G+ N GL
Sbjct: 699 TGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFPGTNQSGL 746
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 84/228 (36%), Gaps = 4/228 (1%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLR--NCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
N G+ L N GL L T GL+ N G+ N GL L N GL L
Sbjct: 531 TNQSGVPLTGTNQTGLQL--TGTNQFGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQL 588
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
N GL L N GL L N L L N G+ N L L N G+ L
Sbjct: 589 TGTNQPGLQLTGTNQTGLQLTGTNQSRLQLTGTNQSGVPFTGTNQSSLQLTGTNQSGVPL 648
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N GL L N GL L N G+ L N GL L N G+ N GL L
Sbjct: 649 TGTNQTGLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGVPFTGTNQSGLQL 708
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N G+ N GL L N G+ N GL L N GL
Sbjct: 709 TGTNQSGVPFTGTNQSGLQLTGTNQSGVPFPGTNQSGLQLTGTNQSGL 756
>gi|302857690|ref|XP_002959935.1| hypothetical protein VOLCADRAFT_72041 [Volvox carteri f.
nagariensis]
gi|300253882|gb|EFJ39001.1| hypothetical protein VOLCADRAFT_72041 [Volvox carteri f.
nagariensis]
Length = 289
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 87/226 (38%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C+ L R C+ L R C+ L R C+ L C+ L R C+ L R
Sbjct: 42 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLTCMCSPRSLLARMCSPRSLLARM 101
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C+ L R C+ L R C+ L R C+ L R C+ L C+ L
Sbjct: 102 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLACM 161
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C+ L R C+ L R C+ L R C+ L C+ L R C+ L R
Sbjct: 162 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLARMCSPRSLLARM 221
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
C+ L R C+ L R C+ L R C+ L R C+ +
Sbjct: 222 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRPV 267
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 88/229 (38%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R C+ L C+ L R C+ L R C+ L R C+ L C+ L
Sbjct: 30 RMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLTCMCSPRSLLA 89
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R C+ L R C+ L R C+ L R C+ L R C+ L R C+ L
Sbjct: 90 RMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 149
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
C+ L C+ L R C+ L R C+ L R C+ L C+ L
Sbjct: 150 CMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLA 209
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
R C+ L R C+ L R C+ L R C+ L R C+ L+
Sbjct: 210 RMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLL 258
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 87/227 (38%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C+ L R C+ L C+ L R C+ L R C+ L R C+ L
Sbjct: 22 CSPRSLLARMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLTCM 81
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C+ L R C+ L R C+ L R C+ L R C+ L R C+ L R
Sbjct: 82 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARM 141
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C+ L C+ L C+ L R C+ L R C+ L R C+ L
Sbjct: 142 CSPRSLLACMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLACM 201
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
C+ L R C+ L R C+ L R C+ L R C+ L+
Sbjct: 202 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLL 248
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 84/218 (38%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R C+ L R C+ L R C+ L C+ L R C+ L R C+ L
Sbjct: 50 RMCSPRSLLARMCSPRSLLARMCSPRSLLTCMCSPRSLLARMCSPRSLLARMCSPRSLLA 109
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R C+ L R C+ L R C+ L R C+ L C+ L C+ L
Sbjct: 110 RMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLACMCSPRSLLA 169
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R C+ L R C+ L R C+ L C+ L R C+ L R C+ L
Sbjct: 170 RMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLA 229
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
R C+ L R C+ L R C+ L R C+ +
Sbjct: 230 RMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRPV 267
>gi|334314628|ref|XP_001379507.2| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-interacting
protein 1 [Monodelphis domestica]
Length = 1746
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 72/230 (31%), Gaps = 30/230 (13%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGG------LGLRNCNTGGLGLRNCNTGGLGLRNC 66
N N + NC+ L + +C+ L + N L + N L + N
Sbjct: 1103 FENYNKANKSIENCDAANLSIESCDKVEKLYETNLFVENFEETNLSVENFGETNLYVENF 1162
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
L + C+ L + NC L + N L + L + C + C
Sbjct: 1163 EETNLSVEQCHKANLSIENCEKTNLSIENFEETNLSIE----TNLSIEKCE----EVEKC 1214
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
L + NC L + N + C L + NC L + C + C
Sbjct: 1215 YKANLSVENCEETNLSIVNFE----EVEKCYEANLSVENCEKTNLSIEKCE----EVEKC 1266
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
L + NC + N L + C + CN L + NC
Sbjct: 1267 YEANLSVENC----AEVENSEQANLTIEKCE----EVEKCNEANLSVENC 1308
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 75/242 (30%), Gaps = 36/242 (14%)
Query: 11 KGLRNCNTGGLGLRNCNTGG------LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 64
K + NC+ L + +C+ L + N L + N L + N L +
Sbjct: 1111 KSIENCDAANLSIESCDKVEKLYETNLFVENFEETNLSVENFGETNLYVENFEETNLSVE 1170
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
C+ L + NC L + N L + L + C + C L +
Sbjct: 1171 QCHKANLSIENCEKTNLSIENFEETNLSIE----TNLSIEKCE----EVEKCYKANLSVE 1222
Query: 125 NCNTGGLGLRN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
NC L + N C L + NC L + C + C L + NC
Sbjct: 1223 NCEETNLSIVNFEEVEKCYEANLSVENCEKTNLSIEKCE----EVEKCYEANLSVENC-- 1276
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
+ N L + C + CN L + NC + N L + C
Sbjct: 1277 --AEVENSEQANLTIEKCE----EVEKCNEANLSVENCT----EVENSKQANLPIEKCEE 1326
Query: 239 GG 240
Sbjct: 1327 AE 1328
>gi|156402772|ref|XP_001639764.1| predicted protein [Nematostella vectensis]
gi|156226894|gb|EDO47701.1| predicted protein [Nematostella vectensis]
Length = 123
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 163
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 160
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 161 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%)
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + L
Sbjct: 12 GLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPAL 71
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 72 GLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%)
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + L
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPAL 121
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 18 LSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLS 77
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
LGL+ + LGL+ + LGL+ + LGL+ + LGL
Sbjct: 78 LSALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
>gi|340719157|ref|XP_003398023.1| PREDICTED: hypothetical protein LOC100645253 [Bombus terrestris]
Length = 2096
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 68/192 (35%), Gaps = 5/192 (2%)
Query: 1 MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
P P ++ G N LG R N G R N G R+ + G G R N
Sbjct: 1063 FPMFEPPFNSSG---PNPYSLGPRGPNDVQFGPRALNDGQFDPRSSSDGQFGPRASNNAQ 1119
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
G R G G R G G R N G G R N G R N G G R+ N G
Sbjct: 1120 FGPRGLGDGQYGPRGTGDGQFGPRAPNDGQFGQRGPNDAQFGPRGPNDGQFGPRSVNDGM 1179
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
G R N G G R GLR N G R N G G R L L N G
Sbjct: 1180 FGPRGPNDGLFGTRGPVENQFGLRAPNNVQFGPRPSNIGQFGPR--YDAQLSLSRPNDGQ 1237
Query: 181 LGLRNCNTGGLG 192
G R N G G
Sbjct: 1238 FGPRGTNDGQFG 1249
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 63/177 (35%), Gaps = 2/177 (1%)
Query: 46 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
N LG R N G R N G R+ + G G R N G R G G R
Sbjct: 1075 PNPYSLGPRGPNDVQFGPRALNDGQFDPRSSSDGQFGPRASNNAQFGPRGLGDGQYGPRG 1134
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G G R N G G R N G R N G G R+ N G G R N G G R
Sbjct: 1135 TGDGQFGPRAPNDGQFGQRGPNDAQFGPRGPNDGQFGPRSVNDGMFGPRGPNDGLFGTRG 1194
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
GLR N G R N G G R L L N G G R N G G
Sbjct: 1195 PVENQFGLRAPNNVQFGPRPSNIGQFGPR--YDAQLSLSRPNDGQFGPRGTNDGQFG 1249
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 60/174 (34%), Gaps = 8/174 (4%)
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N LG R N G R N G R+ + G G R N G R G G R
Sbjct: 1075 PNPYSLGPRGPNDVQFGPRALNDGQFDPRSSSDGQFGPRASNNAQFGPRGLGDGQYGPRG 1134
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
G G R N G G R N G R N G G R+ N G G R N G G R
Sbjct: 1135 TGDGQFGPRAPNDGQFGQRGPNDAQFGPRGPNDGQFGPRSVNDGMFGPRGPNDGLFGTRG 1194
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--------CNTGGLGLRNCNTGGL 241
GLR N G R N G G R N G G R N G
Sbjct: 1195 PVENQFGLRAPNNVQFGPRPSNIGQFGPRYDAQLSLSRPNDGQFGPRGTNDGQF 1248
>gi|260800470|ref|XP_002595153.1| hypothetical protein BRAFLDRAFT_67948 [Branchiostoma floridae]
gi|229280395|gb|EEN51164.1| hypothetical protein BRAFLDRAFT_67948 [Branchiostoma floridae]
Length = 249
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 88/238 (36%), Gaps = 10/238 (4%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
L +C+ + L +C+ + L +C + L +C+ + L C + L +C+
Sbjct: 11 MALIHCHNTWMALIHCHNTCMALLHCQNTCMALIHCHNTRIALLQCQNTCMALLHCHNTW 70
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
+ L +C + L C + L C + L C + L +C + L C
Sbjct: 71 MTLLHCQNTWMTLLQCQNTCMALLQCQNTWMTLLQCQNTCMALLHCQNTWMTLLQCQNTW 130
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-NTGG--------- 180
+ L + L +C + L +C + L C + L +C NT
Sbjct: 131 MALIYSQNTWMTLIHCQNTWMTLLHCQNTWMTLLQCQNTCMALLHCQNTWMTLLQGQNTC 190
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
+ L +C + L C + L +C + L +C + L + L +C+T
Sbjct: 191 MALIHCQNTWMTLLQCQNTCMTLIHCQNTWMTLIHCQNTWMTLLQFQDTWMTLLHCHT 248
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 85/227 (37%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
+ L +C+ + L +C+ + L +C + L +C+ + L C + L +C+
Sbjct: 11 MALIHCHNTWMALIHCHNTCMALLHCQNTCMALIHCHNTRIALLQCQNTCMALLHCHNTW 70
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
+ L +C + L C + L C + L C + L +C + L C
Sbjct: 71 MTLLHCQNTWMTLLQCQNTCMALLQCQNTWMTLLQCQNTCMALLHCQNTWMTLLQCQNTW 130
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+ L + L +C + L +C + L C + L +C + L
Sbjct: 131 MALIYSQNTWMTLIHCQNTWMTLLHCQNTWMTLLQCQNTCMALLHCQNTWMTLLQGQNTC 190
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSK 247
+ L +C + L C + L +C + L +C + + + +
Sbjct: 191 MALIHCQNTWMTLLQCQNTCMTLIHCQNTWMTLIHCQNTWMTLLQFQ 237
>gi|156394483|ref|XP_001636855.1| predicted protein [Nematostella vectensis]
gi|156223962|gb|EDO44792.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 132/221 (59%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LGL + +T LGL + +T LGL + +T LGL +T LGL + +T LGL + +T
Sbjct: 3 LGLYSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCSYSTMT 62
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 122
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T
Sbjct: 123 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 182
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 183 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 223
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 132/222 (59%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
T GL + +T LGL + +T LGL + +T LGL +T LGL + +T LGL + +T
Sbjct: 2 TLGLYSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCSYSTM 61
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T
Sbjct: 62 TLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTM 121
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T
Sbjct: 122 TLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTM 181
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 182 TLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 223
>gi|148680449|gb|EDL12396.1| mCG125898 [Mus musculus]
Length = 1705
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 91/249 (36%), Gaps = 22/249 (8%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
LR C G LR C G LR C G LR C G LR C G LR C G
Sbjct: 436 LRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTV 495
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
LR C G LR C G LR C LR C G LR C G LR C G
Sbjct: 496 LRLCMPGLTVLRLCMPGLTVLRLCMPVLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTV 555
Query: 133 LRNCNTGGLGLRNCNTGGL----------------------GLRNCNTGGLGLRNCNTGG 170
LR C G LR C G L+ C G LR C G
Sbjct: 556 LRLCMPGLTVLRLCMPGLTVLYAGSHSSVCRVLQFSGSVCRVLQFCMPGLTVLRLCMPGL 615
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
LR C G LR C G LR C G LR C G LR C G LR C G
Sbjct: 616 TVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGL 675
Query: 231 LGLRNCNTG 239
LR C G
Sbjct: 676 TVLRLCMPG 684
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 90/248 (36%), Gaps = 22/248 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 427 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 486
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R C G LR C G LR C G LR C LR C G LR C G L
Sbjct: 487 RLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPVLTVLRLCMPGLTVLRLCMPGLTVL 546
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGL----------------------GLRNCNTGGL 171
R C G LR C G LR C G L+ C G
Sbjct: 547 RLCMPGLTVLRLCMPGLTVLRLCMPGLTVLYAGSHSSVCRVLQFSGSVCRVLQFCMPGLT 606
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
LR C G LR C G LR C G LR C G LR C G LR C G
Sbjct: 607 VLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 666
Query: 232 GLRNCNTG 239
LR C G
Sbjct: 667 VLRLCMPG 674
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 91/255 (35%), Gaps = 28/255 (10%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
LR C G LR C G LR C G LR C G LR C LR C G
Sbjct: 476 LRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPVLTVLRLCMPGLTV 535
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------------- 113
LR C G LR C G LR C G LR C G L
Sbjct: 536 LRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLYAGSHSSVCRVLQFSGSVC 595
Query: 114 ---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+ C G LR C G LR C G LR C G LR C G LR C G
Sbjct: 596 RVLQFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGL 655
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLGLRNCNTGGLGLR 224
LR C G LR C G LR C G LR C G G + C G LR
Sbjct: 656 TVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLYAGSQFQFCMPGLTVLR 715
Query: 225 NCNTGGLGLRNCNTG 239
C G LR C G
Sbjct: 716 LCMPGLTVLRLCMPG 730
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 79/221 (35%), Gaps = 29/221 (13%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL--- 63
P+ T LR C G LR C G LR C G LR C G LR C G L
Sbjct: 521 PVLTV-LRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLYAG 579
Query: 64 -------------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 104
+ C G LR C G LR C G LR C G LR
Sbjct: 580 SHSSVCRVLQFSGSVCRVLQFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLR 639
Query: 105 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----- 159
C G LR C G LR C G LR C G LR C G LR C G
Sbjct: 640 LCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLY 699
Query: 160 -GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
G + C G LR C G LR C G LR C G
Sbjct: 700 AGSQFQFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPG 740
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 87 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 146
Query: 74 ------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
+ C G + LR C G LR C G LR C G LR C G
Sbjct: 147 YAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 206
Query: 122 GLRNCNTGGLGLRNCNTG 139
LR C G LR C G
Sbjct: 207 VLRLCMPGLTVLRLCMPG 224
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 24 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 83
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 87 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 146
Query: 84 ------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
+ C G + LR C G LR C G LR C G LR C G
Sbjct: 147 YAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 206
Query: 132 GLRNCNTGGLGLRNCNTG 149
LR C G LR C G
Sbjct: 207 VLRLCMPGLTVLRLCMPG 224
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 87 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 146
Query: 94 ------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
+ C G + LR C G LR C G LR C G LR C G
Sbjct: 147 YAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 206
Query: 142 GLRNCNTGGLGLRNCNTG 159
LR C G LR C G
Sbjct: 207 VLRLCMPGLTVLRLCMPG 224
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 44 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 103
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 87 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 146
Query: 104 ------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
+ C G + LR C G LR C G LR C G LR C G
Sbjct: 147 YAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 206
Query: 152 GLRNCNTGGLGLRNCNTG 169
LR C G LR C G
Sbjct: 207 VLRLCMPGLTVLRLCMPG 224
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 87 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 146
Query: 114 ------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ C G + LR C G LR C G LR C G LR C G
Sbjct: 147 YAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 206
Query: 162 GLRNCNTGGLGLRNCNTG 179
LR C G LR C G
Sbjct: 207 VLRLCMPGLTVLRLCMPG 224
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 87 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 146
Query: 124 ------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ C G + LR C G LR C G LR C G LR C G
Sbjct: 147 YAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 206
Query: 172 GLRNCNTGGLGLRNCNTG 189
LR C G LR C G
Sbjct: 207 VLRLCMPGLTVLRLCMPG 224
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 87 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 146
Query: 134 ------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ C G + LR C G LR C G LR C G LR C G
Sbjct: 147 YAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 206
Query: 182 GLRNCNTGGLGLRNCNTG 199
LR C G LR C G
Sbjct: 207 VLRLCMPGLTVLRLCMPG 224
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 87 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 146
Query: 144 ------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ C G + LR C G LR C G LR C G LR C G
Sbjct: 147 YAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 206
Query: 192 GLRNCNTGGLGLRNCNTG 209
LR C G LR C G
Sbjct: 207 VLRLCMPGLTVLRLCMPG 224
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 87 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 146
Query: 154 ------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
+ C G + LR C G LR C G LR C G LR C G
Sbjct: 147 YAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 206
Query: 202 GLRNCNTGGLGLRNCNTG 219
LR C G LR C G
Sbjct: 207 VLRLCMPGLTVLRLCMPG 224
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 163
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 87 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 146
Query: 164 ------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ C G + LR C G LR C G LR C G LR C G
Sbjct: 147 YAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 206
Query: 212 GLRNCNTGGLGLRNCNTG 229
LR C G LR C G
Sbjct: 207 VLRLCMPGLTVLRLCMPG 224
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 52/138 (37%), Gaps = 12/138 (8%)
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 87 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 146
Query: 174 ------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ C G + LR C G LR C G LR C G LR C G
Sbjct: 147 YAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLT 206
Query: 222 GLRNCNTGGLGLRNCNTG 239
LR C G LR C G
Sbjct: 207 VLRLCMPGLTVLRLCMPG 224
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 49/129 (37%), Gaps = 12/129 (9%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL--------- 63
LR C G LR C G LR C G LR C G LR C G L
Sbjct: 96 LRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLYAGSHSSVC 155
Query: 64 ---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
+ C G + LR C G LR C G LR C G LR C G LR C G
Sbjct: 156 RVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGL 215
Query: 121 LGLRNCNTG 129
LR C G
Sbjct: 216 TVLRLCMPG 224
>gi|350396132|ref|XP_003484453.1| PREDICTED: hypothetical protein LOC100748236 [Bombus impatiens]
Length = 2092
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 67/192 (34%), Gaps = 5/192 (2%)
Query: 1 MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
P P ++ G N LG R N G R N G R N G G R N
Sbjct: 1058 FPMFEPPFNSSG---PNPYSLGPRGPNDVQFGPRALNDGQFDSRGSNDGQFGPRASNNTQ 1114
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
G R G G R G G R N G G R N G R N G G R+ N G
Sbjct: 1115 FGPRGLGDGQYGPRGTGDGQFGPRASNDGQFGQRGPNDAQFGPRGPNDGQFGPRSINDGM 1174
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
G R N G G R GLR N G R N G G R L L N G
Sbjct: 1175 FGPRGPNDGLFGTRGPVENQFGLRAPNNAQFGPRPSNIGQFGPR--YDAQLNLSRPNDGQ 1232
Query: 181 LGLRNCNTGGLG 192
G R N G G
Sbjct: 1233 FGPRGTNDGQFG 1244
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 62/177 (35%), Gaps = 2/177 (1%)
Query: 46 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
N LG R N G R N G R N G G R N G R G G R
Sbjct: 1070 PNPYSLGPRGPNDVQFGPRALNDGQFDSRGSNDGQFGPRASNNTQFGPRGLGDGQYGPRG 1129
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G G R N G G R N G R N G G R+ N G G R N G G R
Sbjct: 1130 TGDGQFGPRASNDGQFGQRGPNDAQFGPRGPNDGQFGPRSINDGMFGPRGPNDGLFGTRG 1189
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
GLR N G R N G G R L L N G G R N G G
Sbjct: 1190 PVENQFGLRAPNNAQFGPRPSNIGQFGPR--YDAQLNLSRPNDGQFGPRGTNDGQFG 1244
>gi|344252641|gb|EGW08745.1| Uncharacterized PPE family protein PPE40 [Cricetulus griseus]
Length = 261
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 92/225 (40%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+TG L +TG L +TG L +TG L +TG L +TG L
Sbjct: 33 HTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQ 92
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
+TG L +TG L +TG L +TG L +TG L +TG L
Sbjct: 93 HTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQ 152
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
+TG L +TG L +TG L +TG L +TG L +TG L
Sbjct: 153 HTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQ 212
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+TG L +TG L +TG L +TG L +TG L
Sbjct: 213 HTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSL 257
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 92/225 (40%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+TG L +TG L +TG L +TG L +TG L +TG L
Sbjct: 13 HTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQ 72
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
+TG L +TG L +TG L +TG L +TG L +TG L
Sbjct: 73 HTGSLDSTAQHTGSLDSTAQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQ 132
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
+TG L +TG L +TG L +TG L +TG L +TG L
Sbjct: 133 HTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQ 192
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+TG L +TG L +TG L +TG L +TG L
Sbjct: 193 HTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSL 237
>gi|432096364|gb|ELK27120.1| Mucin-19 [Myotis davidii]
Length = 1222
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 10/243 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCN----------TGGLGLRNCNTGGLGLRNCNTGGLGLR 64
+C+T LG +C TG LG + + T LG + +T L + +T L
Sbjct: 36 SCHTDTLGSSSCQTGILGSSSYHKDTLGSSSYRTDTLGSSSYHTDTLSSSSYHTDTLSSS 95
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+ +T L + +T L + +T L + +T L + +T L + +T L
Sbjct: 96 SSHTDTLSSSSSHTDTLSSSSSHTDTLSSSSSHTDTLSSSSSHTDTLSSSSSHTDTLSSS 155
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
+ +T L + +T L + +T L + +T L + +T L + +T L
Sbjct: 156 SSHTDTLSSSSSHTDTLSSSSSHTDTLSSSSSHTDTLSSSSSHTDTLSSSSSHTDTLSSS 215
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
+ +T L + +T L + +T L + +T L + +T L + +T L
Sbjct: 216 SSHTDTLSSSSSHTDTLSSSSSHTDTLSSSSSHTDTLSSSSSHTDTLSSSSSHTDTLSSS 275
Query: 245 KSK 247
S
Sbjct: 276 SSH 278
>gi|340628332|ref|YP_004746784.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340006522|emb|CCC45707.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length = 3719
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 105/234 (44%), Gaps = 14/234 (5%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G LG
Sbjct: 1960 NVGGVNLGFANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNLGFG 2019
Query: 75 NC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 130
N TG GL N GL N +G GL N G +GL N TG G+GL G
Sbjct: 2020 NAGLTTGAAGLGNV-----GLANAGSGNWGLANVGVGNIGLANTGTGNIGIGLTGDYRTG 2074
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
+G N TG LGL N TG +G N TG GL N + G+ N T GL N
Sbjct: 2075 IGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFN 2134
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
GL N NTG L + + NTGG+ NTG + NTG N NTG
Sbjct: 2135 TGLANAGSYNTGSLNVGSFNTGGVNPGTINTGWFNTGHTNTGLFNTGNVNTGAF 2188
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N TG LG N G LG N TG GL N GL N +G GL N
Sbjct: 1996 LGLGNVGTGNLGFGNIGAGNLGFGNAGLTTGAAGLGNV-----GLANAGSGNWGLANVGV 2050
Query: 79 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +GL N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2051 GNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
+ G+ N T GL N GL N NTG L + + NTGG+ NTG
Sbjct: 2111 GSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTINTGWFNT 2170
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG N NTG + N G L
Sbjct: 2171 GHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N TG LG N G LG N TG GL N GL N +G GL N
Sbjct: 1996 LGLGNVGTGNLGFGNIGAGNLGFGNAGLTTGAAGLGNV-----GLANAGSGNWGLANVGV 2050
Query: 89 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +GL N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2051 GNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 203
+ G+ N T GL N GL N NTG L + + NTGG+ NTG
Sbjct: 2111 GSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTINTGWFNT 2170
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
+ NTG N NTG + N G L
Sbjct: 2171 GHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N TG LG N G LG N TG GL N GL N +G GL N
Sbjct: 1996 LGLGNVGTGNLGFGNIGAGNLGFGNAGLTTGAAGLGNV-----GLANAGSGNWGLANVGV 2050
Query: 99 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G +GL N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2051 GNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 213
+ G+ N T GL N GL N NTG L + + NTGG+ NTG
Sbjct: 2111 GSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTINTGWFNT 2170
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + N G L
Sbjct: 2171 GHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 107/267 (40%), Gaps = 28/267 (10%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +GL N +G GL N G +GL N TG G+GL G+G N TG LGL N
Sbjct: 2031 GNVGLANAGSGNWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNS 2090
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 133
TG +G N TG GL N + G+ N T GL N GL N NTG L +
Sbjct: 2091 GTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNV 2150
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---------- 183
+ NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2151 GSFNTGGVNPGTINTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDRHGLVGFS 2210
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ + G L + N N G + + + G+ L + + N G +
Sbjct: 2211 FSIDITGSTLLDLN------ETLNLGPVTIEQIDIPGMSLFDVH------EIVNIGPFTI 2258
Query: 244 PKSKRGAQE-NASRSENEPCLVKIKFT 269
P+ A + + P +V + T
Sbjct: 2259 PQVDVPAIPLDIHEAMQIPPIVLLPAT 2285
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + +GL N G N LGL N +G +G N G +G N
Sbjct: 1359 SPIVNIGWADVGAFNIGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1418
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL + G+G
Sbjct: 1419 SGPA-VGLAGL--GNVGLGNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGG 1475
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
N +G +GL N TG +G N TG GL N + G+ N T GL N
Sbjct: 1476 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNAG------ 1529
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + + NTGG N NTG + NTG + NTG L+
Sbjct: 1530 -NFNTGIANPGSYNTGSFNVGDTNTGGFNPGNINTGWFNTGHANTGVMNTGTLNTGVLM 1587
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 108/242 (44%), Gaps = 13/242 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G N LGL N +G +G N G +G N +GL G +GL N +
Sbjct: 1384 WGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFANSGPA-VGLAGL--GNVGLGNAGSNN 1440
Query: 71 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
GL N G +GL N TG G+GL + G+G N +G +GL N TG +G N T
Sbjct: 1441 WGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGT 1500
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G GL N + G+ N T GL N NTG + NTG + + NTGG N
Sbjct: 1501 GNFGLFNSGSFNTGIGNSGTSSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGN 1560
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
NTG + NTG + NTG L + ++ G+ R + G GL G+ +P+
Sbjct: 1561 INTGWFNTGHANTGVMNTGTLNTGVL-MSGTHSNGVLWRGDHEGLFGLSY----GITIPQ 1615
Query: 246 SK 247
Sbjct: 1616 FP 1617
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 760 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 819
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 820 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 874
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N + G+ N
Sbjct: 875 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGSFNTGIGNS 934
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
G+ N + G+ N NTG + NTGG NTG + NTG
Sbjct: 935 GVASTGVFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 990
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 92/200 (46%), Gaps = 7/200 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL + G+G N +G +GL N
Sbjct: 1429 GNVGLGNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNS 1488
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N T GL N NTG + NTG +
Sbjct: 1489 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNAGNFNTGIANPGSYNTGSFNV 1548
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
+ NTGG N NTG + NTG + NTG L + ++ G+ R + G GL
Sbjct: 1549 GDTNTGGFNPGNINTGWFNTGHANTGVMNTGTLNTGVL-MSGTHSNGVLWRGDHEGLFGL 1607
Query: 204 RN-CNTGGLGLRNCNTGGLG 222
+R TGG+G
Sbjct: 1608 SYGITIPQFPIRITTTGGIG 1627
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 94/231 (40%), Gaps = 12/231 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
+ L + G L LG + LGL N G G N LGL N G
Sbjct: 2543 QQLSGLSAAGTALSQSPIINLGPADAGNFNLGLGNVGDGNWGAANIGDVNLGLGNIGAGN 2602
Query: 71 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG----GL 121
LG N G +G N G G+ N G G N +G+RN NTG G+
Sbjct: 2603 LGFANIGHGNIGFGNSGLTAGAAGIGNMGFGNAGSANYGFANVGVRNIGVANTGSGNIGI 2662
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
GL N G+G N G +GL N T +G N TG G+ N + G+ N TG
Sbjct: 2663 GLVGDNLTGIGGLNSGAGNIGLFNSGTANIGFFNSGTGNFGIGNSGSYNTGIGNSGTGST 2722
Query: 182 GLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
GL N + G+ N NTG + NTGG N NTG + NTG
Sbjct: 2723 GLFNAGSFNTGVANPGSYNTGSFNAGDTNTGGFNPGNVNTGWFNTGHTNTG 2773
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 90/197 (45%), Gaps = 7/197 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL + G+G N +G +GL N TG
Sbjct: 1432 GLGNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNSGTG 1491
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N T GL N NTG + NTG + +
Sbjct: 1492 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1551
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN- 185
NTGG N NTG + NTG + NTG L + ++ G+ R + G GL
Sbjct: 1552 NTGGFNPGNINTGWFNTGHANTGVMNTGTLNTGVL-MSGTHSNGVLWRGDHEGLFGLSYG 1610
Query: 186 CNTGGLGLRNCNTGGLG 202
+R TGG+G
Sbjct: 1611 ITIPQFPIRITTTGGIG 1627
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 745 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 801
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 802 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 857
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 858 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 916
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N G+ N + G+ N NTG + NTGG
Sbjct: 917 GNFGIGNSGSFNTGIGNSGVASTGVFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 976
Query: 236 CNTGGL 241
NTG
Sbjct: 977 INTGWF 982
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 803 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 862
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 863 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 922
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N + G+ N G+ N + G+ N NTG + NTGG NTG
Sbjct: 923 NSGSFNTGIGNSGVASTGVFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 982
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 983 NTGHANT---GLANAGTFGTG 1000
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 655 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 713
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 714 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 773
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 774 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 833
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 834 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 893
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 894 SGIGNIGLFNSGTGNVGFFNSGTG 917
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVGSYNTGSFNAGD 384
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N + G +V
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGMFLV 432
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVGSYNTGSFNAGD 384
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG NTG L N NTG N NTG
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAF 420
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVGSYNTGSFNAGD 384
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG NTG L N NTG N NTG
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAF 420
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 197 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 256
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 257 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 316
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + N
Sbjct: 317 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVGSYN 376
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 377 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 421
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 110/269 (40%), Gaps = 36/269 (13%)
Query: 10 TKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
G+ N +T G+G +G G L +GG + +T +GL N T LG N
Sbjct: 3105 VSGIYNTSTLGVGTPALVSGLGNVGQQLSGLLSGGSAVNPISTLNIGLANVGTHNLGFGN 3164
Query: 66 C--------------------NTGGLGLRNCNTGGLGLRNC--NTGGLGLRNC---NTGG 100
G LG N G +G N G GL N N GG
Sbjct: 3165 VGEVNLGAGNLGGNNLGLGNIGAGNLGFGNIGHGNVGFGNSGLTAGVPGLGNVGLGNAGG 3224
Query: 101 --LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
GL N G +GL N TG G+GL + G+G N G +GL N TG +G N
Sbjct: 3225 NNWGLANVGVGNIGLANTGTGNIGIGLTGDHQTGIGGLNSGAGNIGLFNSGTGNVGFFNT 3284
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 213
TG GL N + G+ N TG GL N + GL N NTG + NTGG
Sbjct: 3285 GTGNFGLFNSGSYNTGIGNGGTGSTGLFNAGSFNTGLANAGSYNTGSFNAGDTNTGGFNP 3344
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG L + NTG N NTG +
Sbjct: 3345 GSINTGWLNTGHANTGVANAGNVNTGAFV 3373
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 266 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 325
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + NTG +
Sbjct: 326 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVGSYNTGSFNAGDT 385
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG NTG L N NTG N NTG
Sbjct: 386 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAF 420
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 81/203 (39%), Gaps = 13/203 (6%)
Query: 42 GLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 97
G+ N +G G+ N + LG +G G L + G L LG +
Sbjct: 2510 GVLNVGSGVSGIYNTSVLPLGAPALLSGLGNVGQQLSGLSAAGTALSQSPIINLGPADAG 2569
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRN 155
LGL N G G N LGL N G LG N G +G N G G+ N
Sbjct: 2570 NFNLGLGNVGDGNWGAANIGDVNLGLGNIGAGNLGFANIGHGNIGFGNSGLTAGAAGIGN 2629
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGL 213
G G N +G+RN +G+ N +G G+GL N G+G N G +GL
Sbjct: 2630 MGFGNAGSANYGFANVGVRN-----IGVANTGSGNIGIGLVGDNLTGIGGLNSGAGNIGL 2684
Query: 214 RNCNTGGLGLRNCNTGGLGLRNC 236
N T +G N TG G+ N
Sbjct: 2685 FNSGTANIGFFNSGTGNFGIGNS 2707
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G GL N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3085 GSGLANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGQQLSGLLSGGSAVNP 3144
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+T +GL N T LG N LG N LGL N G LG N G +G N
Sbjct: 3145 ISTLNIGLANVGTHNLGFGNVGEVNLGAGNLGGNNLGLGNIGAGNLGFGNIGHGNVGFGN 3204
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL + G+G N
Sbjct: 3205 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDHQTGIGGLNS 3264
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G +GL N TG +G N TG GL N
Sbjct: 3265 GAGNIGLFNSGTGNVGFFNTGTGNFGLFNS 3294
>gi|433628495|ref|YP_007262124.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
gi|432156101|emb|CCK53354.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
Length = 3719
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 105/234 (44%), Gaps = 14/234 (5%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G LG
Sbjct: 1960 NVGGVNLGFANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNLGFG 2019
Query: 75 NC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 130
N TG GL N GL N +G GL N G +GL N TG G+GL G
Sbjct: 2020 NAGLTTGAAGLGNV-----GLANAGSGNWGLANVGVGNIGLANTGTGNIGIGLTGDYRTG 2074
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
+G N TG LGL N TG +G N TG GL N + G+ N T GL N
Sbjct: 2075 IGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFN 2134
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
GL N NTG L + + NTGG+ NTG + NTG N NTG
Sbjct: 2135 TGLANAGSYNTGSLNVGSFNTGGVNPGTINTGWFNTGHTNTGLFNTGNVNTGAF 2188
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N TG LG N G LG N TG GL N GL N +G GL N
Sbjct: 1996 LGLGNVGTGNLGFGNIGAGNLGFGNAGLTTGAAGLGNV-----GLANAGSGNWGLANVGV 2050
Query: 79 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +GL N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2051 GNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
+ G+ N T GL N GL N NTG L + + NTGG+ NTG
Sbjct: 2111 GSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTINTGWFNT 2170
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG N NTG + N G L
Sbjct: 2171 GHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N TG LG N G LG N TG GL N GL N +G GL N
Sbjct: 1996 LGLGNVGTGNLGFGNIGAGNLGFGNAGLTTGAAGLGNV-----GLANAGSGNWGLANVGV 2050
Query: 89 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +GL N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2051 GNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 203
+ G+ N T GL N GL N NTG L + + NTGG+ NTG
Sbjct: 2111 GSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTINTGWFNT 2170
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
+ NTG N NTG + N G L
Sbjct: 2171 GHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N TG LG N G LG N TG GL N GL N +G GL N
Sbjct: 1996 LGLGNVGTGNLGFGNIGAGNLGFGNAGLTTGAAGLGNV-----GLANAGSGNWGLANVGV 2050
Query: 99 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G +GL N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2051 GNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 213
+ G+ N T GL N GL N NTG L + + NTGG+ NTG
Sbjct: 2111 GSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTINTGWFNT 2170
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + N G L
Sbjct: 2171 GHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 107/267 (40%), Gaps = 28/267 (10%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +GL N +G GL N G +GL N TG G+GL G+G N TG LGL N
Sbjct: 2031 GNVGLANAGSGNWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNS 2090
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 133
TG +G N TG GL N + G+ N T GL N GL N NTG L +
Sbjct: 2091 GTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNV 2150
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---------- 183
+ NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2151 GSFNTGGVNPGTINTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDRHGLVGFS 2210
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ + G L + N N G + + + G+ L + + N G +
Sbjct: 2211 FSIDITGSTLLDLN------ETLNLGPVTIEQIDIPGMSLFDVH------EIVNIGPFTI 2258
Query: 244 PKSKRGAQE-NASRSENEPCLVKIKFT 269
P+ A + + P +V + T
Sbjct: 2259 PQVDVPAIPLDIHEAMQIPPIVLLPAT 2285
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 104/239 (43%), Gaps = 12/239 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + +GL N G N LGL N +G +G N G +G N
Sbjct: 1359 SPIVNIGWADVGAFNIGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1418
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL + G+G
Sbjct: 1419 SGPA-VGLAGL--GNVGLGNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGG 1475
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
N +G +GL N TG +G N TG GL N + G+ N T GL N
Sbjct: 1476 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNAG------ 1529
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + + NTGG N NTG + NTG + NTG L+
Sbjct: 1530 -NFNTGIANPGSYNTGSFNVGDTNTGGFNPGNINTGWFNTGHANTGVMNTGTLNTGVLM 1587
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 108/242 (44%), Gaps = 13/242 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G N LGL N +G +G N G +G N +GL G +GL N +
Sbjct: 1384 WGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFANSGPA-VGLAGL--GNVGLGNAGSNN 1440
Query: 71 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
GL N G +GL N TG G+GL + G+G N +G +GL N TG +G N T
Sbjct: 1441 WGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGT 1500
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G GL N + G+ N T GL N NTG + NTG + + NTGG N
Sbjct: 1501 GNFGLFNSGSFNTGIGNSGTSSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGN 1560
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
NTG + NTG + NTG L + ++ G+ R + G GL G+ +P+
Sbjct: 1561 INTGWFNTGHANTGVMNTGTLNTGVL-MSGTHSNGVLWRGDHEGLFGLSY----GITIPQ 1615
Query: 246 SK 247
Sbjct: 1616 FP 1617
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 760 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 819
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 820 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 874
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N + G+ N
Sbjct: 875 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGSFNTGIGNS 934
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
G+ N + G+ N NTG + NTGG NTG + NTG
Sbjct: 935 GVASTGVFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 990
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 92/200 (46%), Gaps = 7/200 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL + G+G N +G +GL N
Sbjct: 1429 GNVGLGNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNS 1488
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N T GL N NTG + NTG +
Sbjct: 1489 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNAGNFNTGIANPGSYNTGSFNV 1548
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
+ NTGG N NTG + NTG + NTG L + ++ G+ R + G GL
Sbjct: 1549 GDTNTGGFNPGNINTGWFNTGHANTGVMNTGTLNTGVL-MSGTHSNGVLWRGDHEGLFGL 1607
Query: 204 RN-CNTGGLGLRNCNTGGLG 222
+R TGG+G
Sbjct: 1608 SYGITIPQFPIRITTTGGIG 1627
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 94/231 (40%), Gaps = 12/231 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
+ L + G L LG + LGL N G G N LGL N G
Sbjct: 2543 QQLSGLSAAGTALSQSPIINLGPADAGNFNLGLGNVGDGNWGAANIGDVNLGLGNIGAGN 2602
Query: 71 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG----GL 121
LG N G +G N G G+ N G G N +G+RN NTG G+
Sbjct: 2603 LGFANIGHGNIGFGNSGLTAGAAGIGNMGFGNAGSANYGFANVGVRNIGVANTGSGNIGI 2662
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
GL N G+G N G +GL N T +G N TG G+ N + G+ N TG
Sbjct: 2663 GLVGDNLTGIGGLNSGAGNIGLFNSGTANIGFFNSGTGNFGIGNSGSYNTGIGNSGTGST 2722
Query: 182 GLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
GL N + G+ N NTG + NTGG N NTG + NTG
Sbjct: 2723 GLFNAGSFNTGVANPGSYNTGSFNAGDTNTGGFNPGNVNTGWFNTGHTNTG 2773
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 90/197 (45%), Gaps = 7/197 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL + G+G N +G +GL N TG
Sbjct: 1432 GLGNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNSGTG 1491
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N T GL N NTG + NTG + +
Sbjct: 1492 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1551
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN- 185
NTGG N NTG + NTG + NTG L + ++ G+ R + G GL
Sbjct: 1552 NTGGFNPGNINTGWFNTGHANTGVMNTGTLNTGVL-MSGTHSNGVLWRGDHEGLFGLSYG 1610
Query: 186 CNTGGLGLRNCNTGGLG 202
+R TGG+G
Sbjct: 1611 ITIPQFPIRITTTGGIG 1627
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 745 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 801
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 802 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 857
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 858 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 916
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N G+ N + G+ N NTG + NTGG
Sbjct: 917 GNFGIGNSGSFNTGIGNSGVASTGVFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 976
Query: 236 CNTGGL 241
NTG
Sbjct: 977 INTGWF 982
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 803 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 862
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 863 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 922
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N + G+ N G+ N + G+ N NTG + NTGG NTG
Sbjct: 923 NSGSFNTGIGNSGVASTGVFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 982
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 983 NTGHANT---GLANAGTFGTG 1000
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 655 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 713
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 714 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 773
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 774 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 833
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 834 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 893
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 894 SGIGNIGLFNSGTGNVGFFNSGTG 917
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVGSYNTGSFNAGD 384
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N + G +V
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGMFLV 432
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVGSYNTGSFNAGD 384
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG NTG L N NTG N NTG
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAF 420
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVGSYNTGSFNAGD 384
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG NTG L N NTG N NTG
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAF 420
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 197 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 256
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N N G+GL + G+G N TG
Sbjct: 257 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 316
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + N
Sbjct: 317 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVGSYN 376
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 377 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 421
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 110/269 (40%), Gaps = 36/269 (13%)
Query: 10 TKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
G+ N +T G+G +G G L +GG + +T +GL N T LG N
Sbjct: 3105 VSGIYNTSTLGVGTPALVSGLGNVGQQLSGLLSGGSAVNPISTLNIGLANVGTHNLGFGN 3164
Query: 66 C--------------------NTGGLGLRNCNTGGLGLRNC--NTGGLGLRNC---NTGG 100
G LG N G +G N G GL N N GG
Sbjct: 3165 VGEVNLGAGNLGGNNLGLGNIGAGNLGFGNIGHGNVGFGNSGLTAGVPGLGNVGLGNAGG 3224
Query: 101 --LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
GL N G +GL N TG G+GL + G+G N G +GL N TG +G N
Sbjct: 3225 NNWGLANVGVGNIGLANTGTGNIGIGLTGDHQTGIGGLNSGAGNIGLFNSGTGNVGFFNT 3284
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 213
TG GL N + G+ N TG GL N + GL N NTG + NTGG
Sbjct: 3285 GTGNFGLFNSGSYNTGIGNGGTGSTGLFNAGSFNTGLANAGSYNTGSFNAGDTNTGGFNP 3344
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG L + NTG N NTG +
Sbjct: 3345 GSINTGWLNTGHANTGVANAGNVNTGAFV 3373
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N N G+GL + G+G N TG +GL N TG
Sbjct: 266 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 325
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + NTG +
Sbjct: 326 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVGSYNTGSFNAGDT 385
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG NTG L N NTG N NTG
Sbjct: 386 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAF 420
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 81/203 (39%), Gaps = 13/203 (6%)
Query: 42 GLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 97
G+ N +G G+ N + LG +G G L + G L LG +
Sbjct: 2510 GVLNVGSGVSGIYNTSVLPLGAPALLSGLGNVGQQLSGLSAAGTALSQSPIINLGPADAG 2569
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRN 155
LGL N G G N LGL N G LG N G +G N G G+ N
Sbjct: 2570 NFNLGLGNVGDGNWGAANIGDVNLGLGNIGAGNLGFANIGHGNIGFGNSGLTAGAAGIGN 2629
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGL 213
G G N +G+RN +G+ N +G G+GL N G+G N G +GL
Sbjct: 2630 MGFGNAGSANYGFANVGVRN-----IGVANTGSGNIGIGLVGDNLTGIGGLNSGAGNIGL 2684
Query: 214 RNCNTGGLGLRNCNTGGLGLRNC 236
N T +G N TG G+ N
Sbjct: 2685 FNSGTANIGFFNSGTGNFGIGNS 2707
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G GL N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3085 GSGLANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGQQLSGLLSGGSAVNP 3144
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+T +GL N T LG N LG N LGL N G LG N G +G N
Sbjct: 3145 ISTLNIGLANVGTHNLGFGNVGEVNLGAGNLGGNNLGLGNIGAGNLGFGNIGHGNVGFGN 3204
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL + G+G N
Sbjct: 3205 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDHQTGIGGLNS 3264
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G +GL N TG +G N TG GL N
Sbjct: 3265 GAGNIGLFNSGTGNVGFFNTGTGNFGLFNS 3294
>gi|15839741|ref|NP_334778.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|422811279|ref|ZP_16859682.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|13879867|gb|AAK44592.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|323721242|gb|EGB30301.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 3275
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 115/278 (41%), Gaps = 18/278 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 125
N G LG N N G L N+G + NTG G+GL N G G N
Sbjct: 1998 NYNIGLGNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWN 2057
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL N T +GL N TG +G+ N G G+ N G GL N TG GL N
Sbjct: 2058 SGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWN 2117
Query: 186 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG +G+ N NTGG + + NTG + NTG + NTG + NTG I
Sbjct: 2118 PGTGNMGVANVGTYNTGGYNVGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2177
Query: 243 --------VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2178 GGNFSNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2215
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 2998 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3057
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3058 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3117
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3118 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3177
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3178 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3236
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2462 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2521
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2522 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2581
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2582 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2641
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2642 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2701
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2702 PGNHNTGLFNIGTFNTG 2718
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3005 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3064
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3065 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3124
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3125 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3184
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3185 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNG 3244
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 3245 FF-----WRGDYQGLGGFAYQSAVSEIPWS 3269
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2515 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2574
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2575 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2626
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2627 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2682
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2683 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2739
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2740 ANAGDYGTGAFITGSMNNGLLWRADR 2765
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3018 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3077
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3078 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3137
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLG 172
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3138 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFN 3197
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG N NTG N NTG + NTG
Sbjct: 3198 PGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3236
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3062 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3121
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 3122 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 3181
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3182 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3236
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2410 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2469
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2470 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2529
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2530 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2589
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2590 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2649
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2650 FNSGTGNVGIGNSGTGNVGIGNTGTG 2675
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2966 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3020
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3021 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3080
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3081 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3140
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3141 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3200
Query: 236 CNTGGL 241
NTGG
Sbjct: 3201 YNTGGF 3206
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2410 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2469
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2470 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2529
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2530 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2589
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2590 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2625
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
>gi|433633369|ref|YP_007266996.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070017]
gi|432164962|emb|CCK62429.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070017]
Length = 3507
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 101/242 (41%), Gaps = 17/242 (7%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNT 98
+GL N + G N LG N + +G N N G+GL N G G N T
Sbjct: 2001 IGLSNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGDNQQGFGSWNSGT 2060
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
GL N T +GL N TG +G+ N TG G+ N G GL N TG GL N T
Sbjct: 2061 ANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 218
G +G+ N T NTGG + + NTG + NTG + NTG + NT
Sbjct: 2121 GNMGVANVGT-------YNTGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Query: 219 GGLGLRNCNTGGLGLRNCNTGGLI--------VPKSKRGAQENASRSENEPCLVKIKFTP 270
G + NTG + NTG I +S Q A + P + + F+
Sbjct: 2174 GFYNTGDYNTGFYNTGDVNTGAFIGGNFSNGAFWQSDHQGQWGAHYAITVPQIPLLNFSL 2233
Query: 271 NL 272
N+
Sbjct: 2234 NI 2235
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL + G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDHQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGFLNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 21 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LG N + +G N N G+GL N G G N T GL N T +GL N T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 135
G +G+ N TG G+ N G GL N TG GL N TG +G+ N NTGG + +
Sbjct: 2081 GNIGIGNSGTGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGS 2140
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + NTG + NTG + NTG + NTG + NTG
Sbjct: 2141 TNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNSNVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N +GL N + G N LG N + +G N N G+GL N G
Sbjct: 1998 NYN-----IGLSNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGDNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N TG G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRN 165
G G N T GL N TG GL N TG +G+ N TGG GL N G+G N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDNQVGIGGTN 2661
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+ +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 109/273 (39%), Gaps = 18/273 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3145 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3205 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGLANSGDVNTGAFNSGNYSNG 3264
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFTPNL 272
RG + + + +I ++ ++
Sbjct: 3265 FF-----WRGDYQGLGGFAYQSAVSEIPWSYDI 3292
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3018 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3077
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3078 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3137
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3138 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3197
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3198 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGLANSGDVNTGAF 3256
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL N G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDNQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 104/270 (38%), Gaps = 33/270 (12%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQVTGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGGFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG--- 119
+G LG N G G N LG N G LG N N G L NTG
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNN 1561
Query: 120 -----------GLGLRNCNTGGL-------------GLRNCNTGGLGLRNCNTGGLGLRN 155
G+GL N G GL N T +GL N TG +G+ N
Sbjct: 1562 IGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNGGLFNSGTNNIGLFNSGTGNIGIGN 1621
Query: 156 CNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
TG G+ N NTG + NTG L N NTG + NTG + NT G
Sbjct: 1622 SGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFN 1681
Query: 213 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG L + NTG + NTGG I
Sbjct: 1682 PGSYNTGYLNTGSYNTGLANSGDVNTGGFI 1711
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGF 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGFLNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 91/226 (40%), Gaps = 17/226 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3098 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3157
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG G+ N G+ N + G N GL N G G + NTG N
Sbjct: 3158 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNAGN 3210
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG + NTGG N NTG N NTG + NTG
Sbjct: 3211 TNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGLANSGDVNTGAF 3256
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 105/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--------------GLGLRNCNTGGLGLRNCNTGGLGLRN 155
G+ N NTG G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG GL N G+G N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDNQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
+GL N TG +G N TG G+ N G+ N + G N GL N G
Sbjct: 3142 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIG 3196
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G + NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3197 NSG--DYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGLANSGDVNTG 3254
Query: 180 GL 181
Sbjct: 3255 AF 3256
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2986 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3040
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3041 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3100
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3101 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3160
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3161 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3220
Query: 236 CNTGGL 241
NTGG
Sbjct: 3221 YNTGGF 3226
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 85/210 (40%), Gaps = 13/210 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N LG N + LG N +G +G N +G G N LG N LG
Sbjct: 1020 IFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNVGPANLGNYNIGFANLG 1079
Query: 73 LRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLG 122
N G G N NTG + NTG G+GL N G N TG +G
Sbjct: 1080 NYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTGNIG 1139
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N T +G+ N TG G+ N +G G+ N + G N NTG + NTG
Sbjct: 1140 LFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTG 1199
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
+ NTG L + NTG N +TG
Sbjct: 1200 WYNTGDTNTGIANLGDFNTGFYNTGNFSTG 1229
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 85/210 (40%), Gaps = 13/210 (6%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
+ N LG N + LG N +G +G N +G G N LG N LG
Sbjct: 1020 IFNAGLANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNVGPANLGNYNIGFANLG 1079
Query: 83 LRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLG 132
N G G N NTG + NTG G+GL N G N TG +G
Sbjct: 1080 NYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTGNIG 1139
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 189
L N T +G+ N TG G+ N +G G+ N + G N NTG + NTG
Sbjct: 1140 LFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTG 1199
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG L + NTG N +TG
Sbjct: 1200 WYNTGDTNTGIANLGDFNTGFYNTGNFSTG 1229
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
>gi|289748838|ref|ZP_06508216.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289689425|gb|EFD56854.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 3125
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 112/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1979 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2038
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2039 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2098
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N + G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2099 GIGNTGIGNPDVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2151
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2152 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2211
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2212 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2245
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1948 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 2007
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 2008 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2062
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N + G GL N TG
Sbjct: 2063 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPDVGNTGLGNSGTGN 2122
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2123 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2154
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 102/249 (40%), Gaps = 13/249 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 122
+G LG N G G N LG N G LG N N G L NTG
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNN 1561
Query: 123 LRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+ NTG G+GL N G N +G GL N T +GL N TG +G+ N
Sbjct: 1562 IGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGN 1621
Query: 176 CNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
TG +G+ N TG G+ N NTG + NTG L N NTG + NTG
Sbjct: 1622 SGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFN 1681
Query: 233 LRNCNTGGL 241
+ NT G
Sbjct: 1682 AGSFNTAGF 1690
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 100/235 (42%), Gaps = 13/235 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 77
+G N +G N +G LG N G G N LG N G LG N N
Sbjct: 1487 VGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGN 1546
Query: 78 TGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G L NTG + NTG G+GL N G N +G GL N T
Sbjct: 1547 AGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNN 1606
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+GL N TG +G+ N TG +G+ N TG G+ N NTG + NTG L N N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVN 1666
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NT G + NTG L + NTG + NTGG I
Sbjct: 1667 TGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGFI 1721
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 107/257 (41%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2492 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2551
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2552 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2611
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRN 165
G G N T GL N TG GL N T +G+ N TGG GL + G+G N
Sbjct: 2612 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2671
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+ +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2672 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2731
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2732 PGNHNTGLFNIGTFNTG 2748
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 107/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2545 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2604
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N T +G+ N TGG G
Sbjct: 2605 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGF--------G 2656
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2657 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2712
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2713 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2769
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2770 ANAGDYGTGAFITGSMNNGLLWRADR 2795
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 105/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2440 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2499
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2500 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2559
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2560 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2619
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N T +G+ N TGG G+ N + +GL
Sbjct: 2620 SGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2679
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2680 FNSGTGNVGIGNSGTGNVGIGNTGTG 2705
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 83/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2440 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2499
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2500 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2559
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2560 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2619
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N T +G+ N TGG
Sbjct: 2620 SGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGF 2655
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N + G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2100 IGNTGIGNPDVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2159
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2160 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2206
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 197
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 198 TGGLGLRNCNTGGLGLRNCNTG 219
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
>gi|254549298|ref|ZP_05139745.1| PPE family protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length = 3280
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1974 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2033
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2034 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2093
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2094 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2146
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2147 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2206
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2207 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2240
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1943 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 2002
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 2003 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2057
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2058 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2117
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2118 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2149
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 100/249 (40%), Gaps = 18/249 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 122
+G LG N G G N LG N G LG N N G L NTG
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNN 1561
Query: 123 LRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+ NTG G+GL N G N +G GL N T +GL N TG +G+ N
Sbjct: 1562 IGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGN 1621
Query: 176 CNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
TG G+ N NTG + NTG L N NTG + NTG + NTG
Sbjct: 1622 SGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTG-----HYNTGSFN 1676
Query: 233 LRNCNTGGL 241
+ NT G
Sbjct: 1677 AGSFNTAGF 1685
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 98/235 (41%), Gaps = 18/235 (7%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 77
+G N +G N +G LG N G G N LG N G LG N N
Sbjct: 1487 VGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFGFGN 1546
Query: 78 TGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G L NTG + NTG G+GL N G N +G GL N T
Sbjct: 1547 AGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNN 1606
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
+GL N TG +G+ N TG G+ N NTG + NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NT G + NTG L + NTG + NTGG I
Sbjct: 1667 TG-----HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGFI 1716
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2487 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2546
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2547 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2606
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRN 165
G G N T GL N TG GL N TG +G+ N TGG GL + G+G N
Sbjct: 2607 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2666
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+ +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2667 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2726
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2727 PGNHNTGLFNIGTFNTG 2743
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2540 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2599
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2600 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2651
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2652 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2707
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2708 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2764
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2765 ANAGDYGTGAFITGSMNNGLLWRADR 2790
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 101/255 (39%), Gaps = 11/255 (4%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + +G N + +G+ N + +G N + +G N + +G N G
Sbjct: 3025 LGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGN 3084
Query: 81 LGL-RNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
+G G +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3085 VGPGLTAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSG 3144
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3145 TGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPG 3204
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENA 254
+ NTGG N NTG N NTG + NTG N + G RG +
Sbjct: 3205 DYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNGFF-----WRGDYQGL 3259
Query: 255 SRSENEPCLVKIKFT 269
+ + +I ++
Sbjct: 3260 GGFAYQSAVSEIPWS 3274
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2435 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2494
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2495 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2554
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2555 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2614
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2615 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2674
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2675 FNSGTGNVGIGNSGTGNVGIGNTGTG 2700
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3030 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3089
Query: 66 -CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G G+GL G G N TG +GL N TG +G N TG G
Sbjct: 3090 TAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWG 3149
Query: 123 LRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
+ N G+ N + G N NTG + NTG N NTG + NTG
Sbjct: 3150 IGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTG 3209
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
G N NTG N NTG + NTG
Sbjct: 3210 GFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3241
Score = 43.5 bits (101), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 79/199 (39%), Gaps = 13/199 (6%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3043 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3102
Query: 58 TG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G G+GL G G N TG +GL N TG +G N TG G+ N G+ N
Sbjct: 3103 NGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGN 3162
Query: 116 CNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
+ G N NTG + NTG N NTG + NTGG N NTG
Sbjct: 3163 TGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFN 3222
Query: 173 LRNCNTGGLGLRNCNTGGL 191
N NTG + NTG
Sbjct: 3223 PGNSNTGIANSGDVNTGAF 3241
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2435 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2494
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2495 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2554
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2555 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2614
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2615 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2650
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 64/155 (41%), Gaps = 5/155 (3%)
Query: 2 PPIVAPISTKGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
P + A I G N G G+GL G G N TG +GL N TG +G N TG
Sbjct: 3087 PGLTAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTG 3146
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3147 NWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDY 3206
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
NTGG N NTG N NTG + NTG
Sbjct: 3207 NTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3241
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2095 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2154
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2155 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2201
>gi|306779195|ref|ZP_07417532.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|306782982|ref|ZP_07421304.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|306787350|ref|ZP_07425672.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|306791903|ref|ZP_07430205.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308327846|gb|EFP16697.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308332200|gb|EFP21051.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308335985|gb|EFP24836.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308339560|gb|EFP28411.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
Length = 3253
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 108/272 (39%), Gaps = 18/272 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2986 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3040
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3041 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3100
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCN 177
+G+ N TG +G N TG G+ N G+ N + G N NTG + N
Sbjct: 3101 IGIGNTGTGNIGFGNTGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYN 3160
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG N NTG + NTGG N NTG N NTG + NTG N +
Sbjct: 3161 TGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYS 3220
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKFT 269
G RG + + + +I ++
Sbjct: 3221 NGFF-----WRGDYQGLGGFAYQSAVSEIPWS 3247
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 55/133 (41%), Gaps = 3/133 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
P + A I G N G +G+ N TG +G N TG G+ N G+ N +
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGTGNWGIGNSGDYNTGIGNTGSTNS 3141
Query: 62 GLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
G N NTG + NTG N NTG + NTGG N NTG N NT
Sbjct: 3142 GFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNT 3201
Query: 119 GGLGLRNCNTGGL 131
G + NTG
Sbjct: 3202 GIANSGDVNTGAF 3214
>gi|253797281|ref|YP_003030282.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|297632840|ref|ZP_06950620.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297729815|ref|ZP_06958933.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|313657144|ref|ZP_07814024.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|375294563|ref|YP_005098830.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|385997129|ref|YP_005915427.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|392385073|ref|YP_005306702.1| PPE8 [Mycobacterium tuberculosis UT205]
gi|392430773|ref|YP_006471817.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253318784|gb|ACT23387.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457068|gb|AEB02491.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|344218175|gb|AEM98805.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|378543624|emb|CCE35895.1| PPE8 [Mycobacterium tuberculosis UT205]
gi|392052182|gb|AFM47740.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 3275
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRN 165
G G N T GL N TG GL N TG +G+ N TGG GL + G+G N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+ +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 101/255 (39%), Gaps = 11/255 (4%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + +G N + +G+ N + +G N + +G N + +G N G
Sbjct: 3020 LGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGN 3079
Query: 81 LGL-RNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
+G G +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3080 VGPGLTAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSG 3139
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3140 TGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPG 3199
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENA 254
+ NTGG N NTG N NTG + NTG N + G RG +
Sbjct: 3200 DYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNGFF-----WRGDYQGL 3254
Query: 255 SRSENEPCLVKIKFT 269
+ + +I ++
Sbjct: 3255 GGFAYQSAVSEIPWS 3269
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G G+GL G G N TG +GL N TG +G N TG G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
+ N G+ N + G N NTG + NTG N NTG + NTG
Sbjct: 3145 IGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
G N NTG N NTG + NTG
Sbjct: 3205 GFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3236
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 79/199 (39%), Gaps = 13/199 (6%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G G+GL G G N TG +GL N TG +G N TG G+ N G+ N
Sbjct: 3098 NGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGN 3157
Query: 116 CNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
+ G N NTG + NTG N NTG + NTGG N NTG
Sbjct: 3158 TGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFN 3217
Query: 173 LRNCNTGGLGLRNCNTGGL 191
N NTG + NTG
Sbjct: 3218 PGNSNTGIANSGDVNTGAF 3236
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 64/155 (41%), Gaps = 5/155 (3%)
Query: 2 PPIVAPISTKGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
P + A I G N G G+GL G G N TG +GL N TG +G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3142 NWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDY 3201
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
NTGG N NTG N NTG + NTG
Sbjct: 3202 NTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3236
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|289744051|ref|ZP_06503429.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289684579|gb|EFD52067.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 3116
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 453 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 512
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 513 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 572
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 573 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 632
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 633 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 692
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 693 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 721
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1852 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 1911
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 1912 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 1971
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 1972 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2024
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2025 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2084
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2085 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2118
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1821 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1880
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1881 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 1935
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 1936 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 1995
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 1996 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2027
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1352 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1411
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1412 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1471
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1472 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1531
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1532 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1591
Query: 240 GLI 242
G I
Sbjct: 1592 GFI 1594
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1325 APANVSGMLNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1384
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1385 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1439
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1440 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1499
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1500 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1559
Query: 238 TGGL 241
T G
Sbjct: 1560 TAGF 1563
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1367 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1426
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1427 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1486
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1487 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1546
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1547 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1593
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 106/264 (40%), Gaps = 11/264 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGG 70
G N + +G N + +G+ N + +G N + +G N G +G G
Sbjct: 2852 GFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGN 2911
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G N G +G+ N TG +G N G G+GL G G N TG +GL N T
Sbjct: 2912 IGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGT 2971
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 185
G +G N TG G+ N G+ N + G N NTG + NTG N
Sbjct: 2972 GNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGN 3031
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3032 TNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNGFF---- 3087
Query: 246 SKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 3088 -WRGDYQGLGGFAYQSAVSEIPWS 3110
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 560 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 619
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 620 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 679
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 680 FDTGDFNNGFL 690
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 94/228 (41%), Gaps = 17/228 (7%)
Query: 31 LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N N G+GL G N G G N T GL N TG GL N T
Sbjct: 2404 IGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGT 2463
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
G +G+ N TGG G+GL + G+G N + +GL N TG +G+ N T
Sbjct: 2464 GNVGIGNMGTGGF--------GVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGT 2515
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
G +G+ N TG G+ N N NTG L NTG N NTG + NT
Sbjct: 2516 GNVGIGNTGTGNTGIGNS-------GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNT 2568
Query: 209 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASR 256
G + NTG + NTG + TG I G A R
Sbjct: 2569 GIANPGHYNTGSYNTGSYNTGMANAGDYGTGAFITGSMNNGLLWRADR 2616
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 2903 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 2962
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 2963 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 3022
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3023 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3077
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 567 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 626
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 627 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 686
Query: 128 TGGL 131
G L
Sbjct: 687 NGFL 690
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 94/216 (43%), Gaps = 7/216 (3%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNT 88
+G+ N +G+ N +G N +GL N N G+GL G N
Sbjct: 2374 IGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGA 2433
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N+
Sbjct: 2434 GNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNS 2493
Query: 149 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 203
G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2494 GSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANP 2553
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG + NTG + NTG
Sbjct: 2554 GNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTG 2589
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 105/247 (42%), Gaps = 20/247 (8%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2313 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2372
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNC--NTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG +GL N N G+GL G N
Sbjct: 2373 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2432
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2433 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2492
Query: 178 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 232
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2493 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2552
Query: 233 LRNCNTG 239
N NTG
Sbjct: 2553 PGNHNTG 2559
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 106/247 (42%), Gaps = 20/247 (8%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-------NTGGLGLRNCNTGGL 61
L N N G + N N GG + + N G G GL NTG + NTG
Sbjct: 2333 LGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNY 2392
Query: 62 GLRNCNTGG--LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+ NTG +GL N N G+GL G N G G N T GL N
Sbjct: 2393 NIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSG 2452
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRN 175
TG GL N TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N
Sbjct: 2453 TGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGN 2512
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLG 232
TG +G+ N TG G+ N GL N NTG N NTG + NTG
Sbjct: 2513 SGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIAN 2572
Query: 233 LRNCNTG 239
+ NTG
Sbjct: 2573 PGHYNTG 2579
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 101/243 (41%), Gaps = 19/243 (7%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2817 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 2871
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N G +G G +G N G +G+ N TG
Sbjct: 2872 GVYNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGN 2931
Query: 121 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G N G G+GL G G N TG +GL N TG +G N TG G+ N
Sbjct: 2932 IGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGD 2991
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G+ N + G N GL N G G + NTG N NTG + NT
Sbjct: 2992 YNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNAGNTNTGSFNPGDYNT 3044
Query: 239 GGL 241
GG
Sbjct: 3045 GGF 3047
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 185 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 244
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 245 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 293
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 185 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 244
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 245 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 302
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 911 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 970
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 971 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1030
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1031 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1083
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1084 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1133
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 911 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 970
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 971 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1030
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1031 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1090
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1091 TGIANLGDFNTGFYNTGNFSTG 1112
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 1973 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2032
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2033 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2079
>gi|308375137|ref|ZP_07442828.2| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308347357|gb|EFP36208.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
Length = 3249
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 566 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 625
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 626 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 685
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 686 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 745
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 746 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 805
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 806 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 834
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1965 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2024
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2025 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2084
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2085 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2137
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2138 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2197
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2198 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2231
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1934 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1993
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1994 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2048
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2049 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2108
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2109 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2140
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1465 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1524
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1525 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1584
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1585 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1644
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1645 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1704
Query: 240 GLI 242
G I
Sbjct: 1705 GFI 1707
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1438 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1497
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1498 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1552
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1553 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1612
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1613 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1672
Query: 238 TGGL 241
T G
Sbjct: 1673 TAGF 1676
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2478 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2537
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2538 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2597
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2598 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2657
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2658 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2717
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2718 PGNHNTGLFNIGTFNTG 2734
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1480 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1539
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1540 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1599
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1600 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1659
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1660 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1706
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2531 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2590
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2591 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2642
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2643 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2698
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2699 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2755
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2756 ANAGDYGTGAFITGSMNNGLLWRADR 2781
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 673 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 732
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 733 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 792
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 793 FDTGDFNNGFL 803
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 680 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 739
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 740 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 799
Query: 128 TGGL 131
G L
Sbjct: 800 NGFL 803
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2426 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2485
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2486 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2545
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2546 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2605
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2606 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2665
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2666 FNSGTGNVGIGNSGTGNVGIGNTGTG 2691
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 108/272 (39%), Gaps = 18/272 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2982 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3036
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3037 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3096
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCN 177
+G+ N TG +G N TG G+ N G+ N + G N NTG + N
Sbjct: 3097 IGIGNTGTGNIGFGNTGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYN 3156
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG N NTG + NTGG N NTG N NTG + NTG N +
Sbjct: 3157 TGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYS 3216
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKFT 269
G RG + + + +I ++
Sbjct: 3217 NGFF-----WRGDYQGLGGFAYQSAVSEIPWS 3243
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2426 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2485
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2486 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2545
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2546 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2605
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2606 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2641
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 298 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 357
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 358 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 406
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 298 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 357
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 358 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 415
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1024 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1083
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1084 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1143
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1144 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1196
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1197 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1246
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1024 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1083
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1084 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1143
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1144 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1203
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1204 TGIANLGDFNTGFYNTGNFSTG 1225
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2086 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2145
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2146 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2192
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 55/133 (41%), Gaps = 3/133 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
P + A I G N G +G+ N TG +G N TG G+ N G+ N +
Sbjct: 3078 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGTGNWGIGNSGDYNTGIGNTGSTNS 3137
Query: 62 GLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
G N NTG + NTG N NTG + NTGG N NTG N NT
Sbjct: 3138 GFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNT 3197
Query: 119 GGLGLRNCNTGGL 131
G + NTG
Sbjct: 3198 GIANSGDVNTGAF 3210
>gi|289441734|ref|ZP_06431478.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289414653|gb|EFD11893.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 3485
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 112/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1967 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2026
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2027 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2086
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N + G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2087 GIGNTGIGNPDVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2139
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2140 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2199
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2200 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2233
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1936 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1995
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1996 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2050
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N + G GL N TG
Sbjct: 2051 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPDVGNTGLGNSGTGN 2110
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2111 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2142
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1467 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1526
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1527 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1586
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1587 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1646
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1647 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1706
Query: 240 GLI 242
G I
Sbjct: 1707 GFI 1709
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1440 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1499
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1500 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1554
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1555 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1614
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1615 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1674
Query: 238 TGGL 241
T G
Sbjct: 1675 TAGF 1678
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1482 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1541
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1542 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1601
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1602 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1661
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1662 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1708
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2480 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2539
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2540 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2599
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRN 165
G G N T GL N TG GL N T +G+ N TGG GL + G+G N
Sbjct: 2600 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2659
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 222
+ +GL N TG +G+ N TG +G+ N TG G+ N NTG L NTG
Sbjct: 2660 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2719
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2720 PGNHNTGLFNIGTFNTG 2736
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 107/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2533 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2592
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N T +G+ N TGG G
Sbjct: 2593 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGF--------G 2644
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2645 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2700
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2701 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2757
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2758 ANAGDYGTGAFITGSMNNGLLWRADR 2783
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 103/258 (39%), Gaps = 11/258 (4%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + +G N + +G+ N + +G N + +G N + +G N G
Sbjct: 3018 LGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGN 3077
Query: 81 LGL-RNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
+G G +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3078 VGPGLTAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSG 3137
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3138 TGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPG 3197
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENA 254
+ NTGG N NTG N NTG + NTG N + G RG +
Sbjct: 3198 DYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAFNSGNYSNGFF-----WRGDYQGL 3252
Query: 255 SRSENEPCLVKIKFTPNL 272
+ + +I ++ ++
Sbjct: 3253 GGFAYQSAVSEIPWSYDI 3270
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3023 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3082
Query: 66 -CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G G+GL G G N TG +GL N TG +G N TG G
Sbjct: 3083 TAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWG 3142
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
+ N G+ N + G N GL N G G + NTG N NTG
Sbjct: 3143 IGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNAGNTNTGSFN 3195
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG N NTG + NTG
Sbjct: 3196 PGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3234
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 105/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2428 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2487
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2488 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2547
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2548 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2607
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N T +G+ N TGG G+ N + +GL
Sbjct: 2608 SGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2667
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2668 FNSGTGNVGIGNSGTGNVGIGNTGTG 2693
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 81/206 (39%), Gaps = 17/206 (8%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3036 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3095
Query: 58 TG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G G+GL G G N TG +GL N TG +G N TG G+ N G+ N
Sbjct: 3096 NGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGN 3155
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+ G N GL N G G + NTG N NTG + NTGG N
Sbjct: 3156 TGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNAGNTNTGSFNPGDYNTGGFNPGN 3208
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTG N NTG + NTG
Sbjct: 3209 YNTGYFNPGNSNTGFANSGDVNTGAF 3234
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 66/162 (40%), Gaps = 9/162 (5%)
Query: 2 PPIVAPISTKGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
P + A I G N G G+GL G G N TG +GL N TG +G N TG
Sbjct: 3080 PGLTAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTG 3139
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
G+ N G+ N + G N GL N G G + NTG N NTG
Sbjct: 3140 NWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNAGNTNTG 3192
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTGG N NTG N NTG + NTG
Sbjct: 3193 SFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3234
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 83/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2428 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2487
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2488 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2547
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2548 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2607
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N T +G+ N TGG
Sbjct: 2608 SGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGF 2643
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N + G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2088 IGNTGIGNPDVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2147
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2148 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2194
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
>gi|306801949|ref|ZP_07438617.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
gi|308351300|gb|EFP40151.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
Length = 3253
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 108/267 (40%), Gaps = 27/267 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASRS 257
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADRQ 2786
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 103/246 (41%), Gaps = 19/246 (7%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-------NTGGLGLRNCNTGGL 61
L N N G + N N GG + + N G G GL NTG + NTG
Sbjct: 2450 LGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNY 2509
Query: 62 GLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+ NTG G+GL N G G N +GL N G+ N G+ N
Sbjct: 2510 NIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTG 2569
Query: 118 TGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+GL N N G+GL G N G G N T GL N TG GL N
Sbjct: 2570 NNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFN 2629
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGL 233
TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N TG +G+
Sbjct: 2630 SGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGI 2689
Query: 234 RNCNTG 239
N TG
Sbjct: 2690 GNTGTG 2695
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 108/272 (39%), Gaps = 18/272 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2986 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3040
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3041 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3100
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCN 177
+G+ N TG +G N TG G+ N G+ N + G N NTG + N
Sbjct: 3101 IGIGNTGTGNIGFGNTGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYN 3160
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG N NTG + NTGG N NTG N NTG + NTG N +
Sbjct: 3161 TGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYS 3220
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKFT 269
G RG + + + +I ++
Sbjct: 3221 NGFF-----WRGDYQGLGGFAYQSAVSEIPWS 3247
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 55/133 (41%), Gaps = 3/133 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
P + A I G N G +G+ N TG +G N TG G+ N G+ N +
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGTGNWGIGNSGDYNTGIGNTGSTNS 3141
Query: 62 GLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
G N NTG + NTG N NTG + NTGG N NTG N NT
Sbjct: 3142 GFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNT 3201
Query: 119 GGLGLRNCNTGGL 131
G + NTG
Sbjct: 3202 GIANSGDVNTGAF 3214
>gi|148660121|ref|YP_001281644.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|307082838|ref|ZP_07491951.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|397672146|ref|YP_006513681.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|448824742|ref|YP_177721.2| PPE family protein PPE8 [Mycobacterium tuberculosis H37Rv]
gi|148504273|gb|ABQ72082.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|308367432|gb|EFP56283.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|395137051|gb|AFN48210.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444893831|emb|CCP43085.1| PPE family protein PPE8 [Mycobacterium tuberculosis H37Rv]
Length = 3300
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2487 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2546
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2547 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2606
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2607 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2666
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2667 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2726
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2727 PGNHNTGLFNIGTFNTG 2743
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3023 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3082
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3083 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3142
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3143 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3202
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3203 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3261
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3030 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3089
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3090 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3149
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3150 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3209
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3210 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNG 3269
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 3270 FF-----WRGDYQGLGGFAYQSAVSEIPWS 3294
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2540 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2599
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2600 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2651
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2652 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2707
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2708 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2764
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2765 ANAGDYGTGAFITGSMNNGLLWRADR 2790
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3043 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3102
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3103 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3162
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLG 172
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3163 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFN 3222
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG N NTG N NTG + NTG
Sbjct: 3223 PGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3261
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3087 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3146
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 3147 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 3206
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3207 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3261
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 105/263 (39%), Gaps = 39/263 (14%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC----- 66
N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2438 ANLGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIG 2497
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2498 IGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLGDNN 2557
Query: 121 LGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
G+ N NTG +GL N N G+GL G N G G N T
Sbjct: 2558 FGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSGT 2617
Query: 169 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNC 216
GL N TG GL N TG +G+ N TGG G+ N + +GL N
Sbjct: 2618 ANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNS 2677
Query: 217 NTGGLGLRNCNTGGLGLRNCNTG 239
TG +G+ N TG +G+ N TG
Sbjct: 2678 GTGNVGIGNSGTGNVGIGNTGTG 2700
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2991 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3045
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3046 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3105
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3106 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3165
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3166 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3225
Query: 236 CNTGGL 241
NTGG
Sbjct: 3226 YNTGGF 3231
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 87/223 (39%), Gaps = 17/223 (7%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GL 91
N G + + N G L + N G L N N G + N N GG + + N G G
Sbjct: 2428 ANLGQFNVGSANLGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGP 2487
Query: 92 GLRNC-------NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGG 140
GL NTG + NTG + NTG G+GL N G G N
Sbjct: 2488 GLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIAN 2547
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNT 198
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2548 MGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGA 2607
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G G N T GL N TG GL N TG +G+ N TGG
Sbjct: 2608 GNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2650
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|306774449|ref|ZP_07412786.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|306970553|ref|ZP_07483214.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308216954|gb|EFO76353.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308359860|gb|EFP48711.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
Length = 3297
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1966 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2025
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2026 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2085
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2086 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2138
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2139 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2198
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2199 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2232
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1935 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1994
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1995 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2049
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2050 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2109
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2110 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2141
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1466 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1525
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1526 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1585
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1586 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1645
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1646 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1705
Query: 240 GLI 242
G I
Sbjct: 1706 GFI 1708
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1439 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1498
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1499 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1553
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1554 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1613
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1614 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1673
Query: 238 TGGL 241
T G
Sbjct: 1674 TAGF 1677
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3020 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3079
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3080 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3139
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3140 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3199
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3200 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3258
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2484 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2543
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2544 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2603
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2604 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2663
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2664 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2723
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2724 PGNHNTGLFNIGTFNTG 2740
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3027 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3086
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3087 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3146
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3147 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3206
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3207 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNG 3266
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 3267 FF-----WRGDYQGLGGFAYQSAVSEIPWS 3291
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1481 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1540
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1541 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1600
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1601 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1660
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1661 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1707
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2537 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2596
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2597 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2648
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2649 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2704
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2705 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2761
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2762 ANAGDYGTGAFITGSMNNGLLWRADR 2787
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3040 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3099
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3100 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3159
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLG 172
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3160 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFN 3219
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG N NTG N NTG + NTG
Sbjct: 3220 PGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3258
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3084 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3143
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 3144 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 3203
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3204 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3258
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 105/263 (39%), Gaps = 39/263 (14%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC----- 66
N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2435 ANLGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIG 2494
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2495 IGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLGDNN 2554
Query: 121 LGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
G+ N NTG +GL N N G+GL G N G G N T
Sbjct: 2555 FGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSGT 2614
Query: 169 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNC 216
GL N TG GL N TG +G+ N TGG G+ N + +GL N
Sbjct: 2615 ANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNS 2674
Query: 217 NTGGLGLRNCNTGGLGLRNCNTG 239
TG +G+ N TG +G+ N TG
Sbjct: 2675 GTGNVGIGNSGTGNVGIGNTGTG 2697
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2988 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3042
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3043 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3102
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3103 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3162
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3163 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3222
Query: 236 CNTGGL 241
NTGG
Sbjct: 3223 YNTGGF 3228
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 87/223 (39%), Gaps = 17/223 (7%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GL 91
N G + + N G L + N G L N N G + N N GG + + N G G
Sbjct: 2425 ANLGQFNVGSANLGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGP 2484
Query: 92 GLRNC-------NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGG 140
GL NTG + NTG + NTG G+GL N G G N
Sbjct: 2485 GLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIAN 2544
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNT 198
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2545 MGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGA 2604
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G G N T GL N TG GL N TG +G+ N TGG
Sbjct: 2605 GNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2647
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 99/260 (38%), Gaps = 25/260 (9%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK-----SKRGAQE--- 252
+ NTG L + NTG N +TG + TG I RG Q+
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGAFWRGDQQGLF 1260
Query: 253 NASRSENEPCLVKIKFTPNL 272
+A P V ++ N+
Sbjct: 1261 SAGYRPEIPAHVTVEVPVNI 1280
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2087 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2146
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2147 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2193
>gi|7478742|pir||D70575 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
Length = 3300
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3023 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3082
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3083 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3142
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3143 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3202
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3203 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3261
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3030 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3089
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3090 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3149
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3150 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3209
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3210 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNG 3269
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 3270 FF-----WRGDYQGLGGFAYQSAVSEIPWS 3294
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 109/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2487 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2546
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
+GL N G+ N G+ N +GL N +G+ G G + N+G
Sbjct: 2547 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIWLTGDGLSGFSSLNSG 2606
Query: 110 G--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2607 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2666
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2667 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2726
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2727 PGNHNTGLFNIGTFNTG 2743
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 105/266 (39%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-------- 54
P+ A I+ GL N G+ N G+ N +GL N +G+
Sbjct: 2540 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIWLTGDGLSG 2599
Query: 55 ----NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2600 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2651
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2652 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2707
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2708 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2764
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2765 ANAGDYGTGAFITGSMNNGLLWRADR 2790
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3043 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3102
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3103 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3162
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLG 172
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3163 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFN 3222
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG N NTG N NTG + NTG
Sbjct: 3223 PGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3261
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3087 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3146
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 3147 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 3206
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3207 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3261
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2991 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3045
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3046 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3105
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3106 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3165
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3166 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3225
Query: 236 CNTGGL 241
NTGG
Sbjct: 3226 YNTGGF 3231
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 102/263 (38%), Gaps = 39/263 (14%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC----- 66
N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2438 ANLGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIG 2497
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2498 IGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLGDNN 2557
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR------------NCNTGGLGLRNCNT 168
G+ N G+ N +GL N +G+ N G G N T
Sbjct: 2558 FGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIWLTGDGLSGFSSLNSGAGNTGFFNSGT 2617
Query: 169 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNC 216
GL N TG GL N TG +G+ N TGG G+ N + +GL N
Sbjct: 2618 ANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNS 2677
Query: 217 NTGGLGLRNCNTGGLGLRNCNTG 239
TG +G+ N TG +G+ N TG
Sbjct: 2678 GTGNVGIGNSGTGNVGIGNTGTG 2700
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 88/223 (39%), Gaps = 17/223 (7%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GL 91
N G + + N G L + N G L N N G + N N GG + + N G G
Sbjct: 2428 ANLGQFNVGSANLGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGP 2487
Query: 92 GLRNC-------NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGG 140
GL NTG + NTG + NTG G+GL N G G N
Sbjct: 2488 GLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIAN 2547
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+GL N G+ N G+ N +GL N +G+ G G + N+G
Sbjct: 2548 MGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIWLTGDGLSGFSSLNSGA 2607
Query: 201 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G N T GL N TG GL N TG +G+ N TGG
Sbjct: 2608 GNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2650
Score = 40.0 bits (92), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|306796089|ref|ZP_07434391.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308343466|gb|EFP32317.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
Length = 3253
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNLGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNLGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNLGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 108/272 (39%), Gaps = 18/272 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2986 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3040
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3041 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3100
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCN 177
+G+ N TG +G N TG G+ N G+ N + G N NTG + N
Sbjct: 3101 IGIGNTGTGNIGFGNTGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYN 3160
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG N NTG + NTGG N NTG N NTG + NTG N +
Sbjct: 3161 TGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYS 3220
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKFT 269
G RG + + + +I ++
Sbjct: 3221 NGFF-----WRGDYQGLGGFAYQSAVSEIPWS 3247
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 55/133 (41%), Gaps = 3/133 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
P + A I G N G +G+ N TG +G N TG G+ N G+ N +
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGTGNWGIGNSGDYNTGIGNTGSTNS 3141
Query: 62 GLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
G N NTG + NTG N NTG + NTGG N NTG N NT
Sbjct: 3142 GFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNT 3201
Query: 119 GGLGLRNCNTGGL 131
G + NTG
Sbjct: 3202 GIANSGDVNTGAF 3214
>gi|289572940|ref|ZP_06453167.1| PE family protein [Mycobacterium tuberculosis K85]
gi|289537371|gb|EFD41949.1| PE family protein [Mycobacterium tuberculosis K85]
Length = 3507
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 101/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N+G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNSGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 109/273 (39%), Gaps = 18/273 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3145 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3205 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAFNSGNYSNG 3264
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFTPNL 272
RG + + + +I ++ ++
Sbjct: 3265 FF-----WRGDYQGLGGFAYQSAVSEIPWSYDI 3292
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3018 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3077
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3078 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3137
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3138 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3197
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3198 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNSGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 94/227 (41%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N+G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNSGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 91/226 (40%), Gaps = 17/226 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3098 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3157
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG G+ N G+ N + G N GL N G G + NTG N
Sbjct: 3158 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNAGN 3210
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG + NTGG N NTG N NTG + NTG
Sbjct: 3211 TNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
+GL N TG +G N TG G+ N G+ N + G N GL N G
Sbjct: 3142 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIG 3196
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G + NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3197 NSG--DYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTG 3254
Query: 180 GL 181
Sbjct: 3255 AF 3256
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2986 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3040
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3041 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3100
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3101 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3160
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3161 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3220
Query: 236 CNTGGL 241
NTGG
Sbjct: 3221 YNTGGF 3226
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 197
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 198 TGGLGLRNCNTGGLGLRNCNTG 219
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|289760466|ref|ZP_06519844.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
gi|289707972|gb|EFD71988.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
Length = 2823
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 108/267 (40%), Gaps = 27/267 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASRS 257
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADRQ 2786
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|31791532|ref|NP_854025.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31617118|emb|CAD93225.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length = 3507
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 109/273 (39%), Gaps = 18/273 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3145 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3205 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAFNSGNYSNG 3264
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFTPNL 272
RG + + + +I ++ ++
Sbjct: 3265 FF-----WRGDYQGLGGFAYQSAVSEIPWSYDI 3292
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3018 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3077
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3078 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3137
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3138 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3197
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3198 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 91/226 (40%), Gaps = 17/226 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3098 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3157
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG G+ N G+ N + G N GL N G G + NTG N
Sbjct: 3158 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNAGN 3210
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG + NTGG N NTG N NTG + NTG
Sbjct: 3211 TNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
+GL N TG +G N TG G+ N G+ N + G N GL N G
Sbjct: 3142 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIG 3196
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G + NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3197 NSG--DYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTG 3254
Query: 180 GL 181
Sbjct: 3255 AF 3256
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2986 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3040
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3041 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3100
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3101 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3160
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3161 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3220
Query: 236 CNTGGL 241
NTGG
Sbjct: 3221 YNTGGF 3226
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 197
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 198 TGGLGLRNCNTGGLGLRNCNTG 219
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|121636268|ref|YP_976491.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988740|ref|YP_002643427.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378770101|ref|YP_005169834.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449062349|ref|YP_007429432.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|121491915|emb|CAL70378.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771853|dbj|BAH24659.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600284|emb|CCC62954.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356592422|gb|AET17651.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449030857|gb|AGE66284.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 3507
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 109/273 (39%), Gaps = 18/273 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3145 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3205 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAFNSGNYSNG 3264
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFTPNL 272
RG + + + +I ++ ++
Sbjct: 3265 FF-----WRGDYQGLGGFAYQSAVSEIPWSYDI 3292
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3018 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3077
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3078 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3137
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3138 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3197
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3198 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 91/226 (40%), Gaps = 17/226 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3098 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3157
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG G+ N G+ N + G N GL N G G + NTG N
Sbjct: 3158 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNAGN 3210
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG + NTGG N NTG N NTG + NTG
Sbjct: 3211 TNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
+GL N TG +G N TG G+ N G+ N + G N GL N G
Sbjct: 3142 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIG 3196
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G + NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3197 NSG--DYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTG 3254
Query: 180 GL 181
Sbjct: 3255 AF 3256
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2986 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3040
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3041 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3100
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3101 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3160
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3161 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3220
Query: 236 CNTGGL 241
NTGG
Sbjct: 3221 YNTGGF 3226
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 197
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 198 TGGLGLRNCNTGGLGLRNCNTG 219
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|289445893|ref|ZP_06435637.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289418851|gb|EFD16052.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 3507
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 109/273 (39%), Gaps = 18/273 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3145 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3205 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAFNSGNYSNG 3264
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFTPNL 272
RG + + + +I ++ ++
Sbjct: 3265 FF-----WRGDYQGLGGFAYQSAVSEIPWSYDI 3292
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3018 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3077
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3078 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3137
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3138 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3197
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3198 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 91/226 (40%), Gaps = 17/226 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3098 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3157
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG G+ N G+ N + G N GL N G G + NTG N
Sbjct: 3158 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNAGN 3210
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG + NTGG N NTG N NTG + NTG
Sbjct: 3211 TNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
+GL N TG +G N TG G+ N G+ N + G N GL N G
Sbjct: 3142 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIG 3196
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G + NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3197 NSG--DYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTG 3254
Query: 180 GL 181
Sbjct: 3255 AF 3256
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2986 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3040
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3041 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3100
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3101 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3160
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3161 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3220
Query: 236 CNTGGL 241
NTGG
Sbjct: 3221 YNTGGF 3226
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNVNNGFL 419
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 197
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 198 TGGLGLRNCNTGGLGLRNCNTG 219
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|148821551|ref|YP_001286305.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|298523832|ref|ZP_07011241.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|148720078|gb|ABR04703.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|298493626|gb|EFI28920.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 3295
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3018 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3077
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3078 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3137
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3138 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3197
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3198 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3256
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3145 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3205 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNG 3264
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 3265 FF-----WRGDYQGLGGFAYQSAVSEIPWS 3289
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3098 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3157
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLG 172
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3158 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFN 3217
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG N NTG N NTG + NTG
Sbjct: 3218 PGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3256
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 3142 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 3201
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3202 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3256
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2986 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3040
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3041 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3100
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3101 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3160
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3161 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3220
Query: 236 CNTGGL 241
NTGG
Sbjct: 3221 YNTGGF 3226
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|440579807|emb|CCG10210.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 3295
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 92/214 (42%), Gaps = 15/214 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N ++G +G N +G N G LG N G +G N +G G N
Sbjct: 1941 LGFGNVDSGNVGHGN-----IGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPAN 1995
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNT 148
LG N G LG N G N LG N + +G N N G+GL N
Sbjct: 1996 LGNYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQ 2050
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
G G N T GL N T +GL N TG +G+ N G G+ N G GL N T
Sbjct: 2051 QGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGT 2110
Query: 209 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
G GL N TG +G+ N NTGG + + NTG
Sbjct: 2111 GNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3018 ANLGFWDLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3077
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3078 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3137
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3138 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3197
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3198 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3256
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3145 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3205 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNG 3264
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 3265 FF-----WRGDYQGLGGFAYQSAVSEIPWS 3289
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3098 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3157
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLG 172
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3158 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFN 3217
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG N NTG N NTG + NTG
Sbjct: 3218 PGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3256
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 3142 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 3201
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3202 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3256
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 103/247 (41%), Gaps = 17/247 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N G L + N G L + N G
Sbjct: 2986 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLANL--GFWDLGSANIGNYNLGSANIGVY 3043
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
L + N G L + N G L + N G +G N G GL G +G N G
Sbjct: 3044 NLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNV---GPGLTAA-IGNIGFGNTGNG 3099
Query: 120 GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3100 NIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSG 3159
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3160 TGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPG 3219
Query: 235 NCNTGGL 241
+ NTGG
Sbjct: 3220 DYNTGGF 3226
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|254363322|ref|ZP_04979368.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134148836|gb|EBA40881.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|379026477|dbj|BAL64210.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 3295
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 92/214 (42%), Gaps = 15/214 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N ++G +G N +G N G LG N G +G N +G G N
Sbjct: 1941 LGFGNVDSGNVGHGN-----IGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPAN 1995
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNT 148
LG N G LG N G N LG N + +G N N G+GL N
Sbjct: 1996 LGNYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQ 2050
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
G G N T GL N T +GL N TG +G+ N G G+ N G GL N T
Sbjct: 2051 QGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGT 2110
Query: 209 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
G GL N TG +G+ N NTGG + + NTG
Sbjct: 2111 GNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3018 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3077
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3078 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3137
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3138 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3197
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3198 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3256
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3145 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3205 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNG 3264
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 3265 FF-----WRGDYQGLGGFAYQSAVSEIPWS 3289
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 108/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3098 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3157
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLG 172
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3158 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFN 3217
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG N NTG N NTG + NTG
Sbjct: 3218 PGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3256
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 3142 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 3201
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3202 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3256
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2986 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 3040
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3041 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3100
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3101 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3160
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3161 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3220
Query: 236 CNTGGL 241
NTGG
Sbjct: 3221 YNTGGF 3226
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|308379758|ref|ZP_07669042.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308363761|gb|EFP52612.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 2358
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1966 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2025
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2026 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2085
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2086 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2138
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2139 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2198
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2199 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2232
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1935 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1994
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1995 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2049
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2050 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2109
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2110 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2141
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1466 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1525
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1526 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1585
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1586 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1645
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1646 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1705
Query: 240 GLI 242
G I
Sbjct: 1706 GFI 1708
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1439 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1498
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1499 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1553
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1554 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1613
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1614 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1673
Query: 238 TGGL 241
T G
Sbjct: 1674 TAGF 1677
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1481 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1540
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1541 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1600
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1601 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1660
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1661 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1707
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 99/260 (38%), Gaps = 25/260 (9%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK-----SKRGAQE--- 252
+ NTG L + NTG N +TG + TG I RG Q+
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGAFWRGDQQGLF 1260
Query: 253 NASRSENEPCLVKIKFTPNL 272
+A P V ++ N+
Sbjct: 1261 SAGYRPEIPAHVTVEVPVNI 1280
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGL--GLRNCNTGGL 191
TG +GL N TG +G+ N TG G+ N NTG + NTG G+ N G
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 G--NYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGL--GLRNCNTGGL 181
TG +GL N TG +G+ N TG G+ N NTG + NTG G+ N G
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 G--NYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2087 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2146
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2147 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2193
Score = 37.0 bits (84), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 72/176 (40%), Gaps = 13/176 (7%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGL--GLRNCNTGGL 121
TG +GL N TG +G+ N TG G+ N NTG + NTG G+ N G
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
G N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 G--NYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Query: 182 GLRNCN---TGGLGLRNCNTG-GLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLG 232
+ G G N + G N G G N G N ++G +G
Sbjct: 420 WRGDHQGLIFGSPGFFNSTSAPSSGFFNSGAGSASGFLNSGANNSGFFNSSSGAIG 475
>gi|289752384|ref|ZP_06511762.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289692971|gb|EFD60400.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length = 3487
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 107/257 (41%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 2482 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 2541
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N T +G+ N TGG G+ +G+ N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2661
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2721
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 2722 PGNHNTGLFNIGTFNTG 2738
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 107/266 (40%), Gaps = 27/266 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N T +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGF--------G 2646
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2647 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 2702
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 2703 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 2759
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASR 256
+ TG I G A R
Sbjct: 2760 ANAGDYGTGAFITGSMNNGLLWRADR 2785
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 103/258 (39%), Gaps = 11/258 (4%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + +G N + +G+ N + +G N + +G N + +G N G
Sbjct: 3020 LGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGN 3079
Query: 81 LGL-RNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
+G G +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3080 VGPGLTAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSG 3139
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3140 TGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPG 3199
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENA 254
+ NTGG N NTG N NTG + NTG N + G RG +
Sbjct: 3200 DYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAFNSGNYSNGFF-----WRGDYQGL 3254
Query: 255 SRSENEPCLVKIKFTPNL 272
+ + +I ++ ++
Sbjct: 3255 GGFAYQSAVSEIPWSYDI 3272
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G G+GL G G N TG +GL N TG +G N TG G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
+ N G+ N + G N NTG + NTG N NTG + NTG
Sbjct: 3145 IGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
G N NTG N NTG + NTG
Sbjct: 3205 GFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3236
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 105/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N T +G+ N TGG G+ N + +GL
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 2669
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 2670 FNSGTGNVGIGNSGTGNVGIGNTGTG 2695
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 79/199 (39%), Gaps = 13/199 (6%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G G+GL G G N TG +GL N TG +G N TG G+ N G+ N
Sbjct: 3098 NGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGN 3157
Query: 116 CNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
+ G N NTG + NTG N NTG + NTGG N NTG
Sbjct: 3158 TGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFN 3217
Query: 173 LRNCNTGGLGLRNCNTGGL 191
N NTG + NTG
Sbjct: 3218 PGNSNTGFANSGDVNTGAF 3236
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 64/155 (41%), Gaps = 5/155 (3%)
Query: 2 PPIVAPISTKGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
P + A I G N G G+GL G G N TG +GL N TG +G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3142 NWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDY 3201
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
NTGG N NTG N NTG + NTG
Sbjct: 3202 NTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3236
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 83/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N T +G+ N TGG
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTSNVGIGNMGTGGF 2645
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N G+ N NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANGGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCN 197
+G+ N TG G+ N +G G+ N + G N G+ N NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANGGSYNTGWYNTGDTN 1207
Query: 198 TGGLGLRNCNTGGLGLRNCNTG 219
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
>gi|308377403|ref|ZP_07668506.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308355903|gb|EFP44754.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009]
Length = 862
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGL--GLRNCNTGGL 191
TG +GL N TG +G+ N TG G+ N NTG + NTG G+ N G
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 G--NYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGL--GLRNCNTGGL 181
TG +GL N TG +G+ N TG G+ N NTG + NTG G+ N G
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 G--NYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
>gi|433629445|ref|YP_007263073.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070010]
gi|432161038|emb|CCK58373.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070010]
Length = 3508
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 112/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1970 SNVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2029
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2030 NNIGFANTGNNNIGIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2089
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
TG G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2090 GTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2142
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2143 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2202
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2203 SNGAFWQSDHQGQWGAYYAITVPQIPLLNFSLNI 2236
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 120/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N NTG L + NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
+ + S + NE ++ +
Sbjct: 810 GDNHGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1939 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNSNVGHGNIGSFNVFSGNRGSYNIGPANLG 1998
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1999 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGDNQQG 2053
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N TG G+ N G GL N TG
Sbjct: 2054 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGN 2113
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2114 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2145
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 106/258 (41%), Gaps = 11/258 (4%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 60
P+ A I+ GL N GL N G+ N +GL N N G+GL G
Sbjct: 2536 PLNAGIANMGLFNLGDNNFGLANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2595
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNT 118
N G G N T GL N TG GL N TG +G+ N TG G+GL N
Sbjct: 2596 FSSLNSGAGNTGFFNSGTANTGLFNAGTGNTGLFNSGTGNVGIGNMGTGSFGIGLSGDNQ 2655
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+G N + +GL N TG +G N TG +G+ N TG G+ N N NT
Sbjct: 2656 VGIGGTNSGSFNIGLFNSGTGNIGFGNSGTGNVGIGNTGTGNTGIGNS-------GNYNT 2708
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G L NTG N NTG + NTG + NTG + NTG + T
Sbjct: 2709 GWLNAGLINTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGMANAGDYGT 2768
Query: 239 GGLIVPKSKRGAQENASR 256
G I G A R
Sbjct: 2769 GAFITGSMNNGLLWRADR 2786
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 98/237 (41%), Gaps = 10/237 (4%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
T + N G G N G G N G G N G+GL N G G N
Sbjct: 2486 TTAVNNIGIGNTGNYNIGMGNTGDYNIGFGNTGNNNI---GIGLTGDNQIGFGPLNAGIA 2542
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 127
+GL N GL N G+ N +GL N N G+GL G N
Sbjct: 2543 NMGLFNLGDNNFGLANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2602
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 185
G G N T GL N TG GL N TG +G+ N TG G+GL N G+G N
Sbjct: 2603 AGNTGFFNSGTANTGLFNAGTGNTGLFNSGTGNVGIGNMGTGSFGIGLSGDNQVGIGGTN 2662
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
+ +GL N TG +G N TG +G+ N TG G+ N NTG L NTG
Sbjct: 2663 SGSFNIGLFNSGTGNIGFGNSGTGNVGIGNTGTGNTGIGNSGNYNTGWLNAGLINTG 2719
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 103/246 (41%), Gaps = 19/246 (7%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-------NTGGLGLRNCNTGGL 61
L N N G + + N GG + + N G G GL NTG + NTG
Sbjct: 2451 LGNSNVGFGNIGHANIGGANIGDFNVGIANAGPGLTTAVNNIGIGNTGNYNIGMGNTGDY 2510
Query: 62 GLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+ NTG G+GL N G G N +GL N GL N G+ N
Sbjct: 2511 NIGFGNTGNNNIGIGLTGDNQIGFGPLNAGIANMGLFNLGDNNFGLANAGNFNQGIANTG 2570
Query: 118 TGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+GL N N G+GL G N G G N T GL N TG GL N
Sbjct: 2571 NNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNAGTGNTGLFN 2630
Query: 176 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
TG +G+ N TG G+GL N G+G N + +GL N TG +G N TG +G+
Sbjct: 2631 SGTGNVGIGNMGTGSFGIGLSGDNQVGIGGTNSGSFNIGLFNSGTGNIGFGNSGTGNVGI 2690
Query: 234 RNCNTG 239
N TG
Sbjct: 2691 GNTGTG 2696
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 104/247 (42%), Gaps = 9/247 (3%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + ++ G+ N +G+ N +G N G+GL N G G N
Sbjct: 2483 PGLTTAVNNIGIGNTGNYNIGMGNTGDYNIGFGNTGNNNIGIGLTGDNQIGFGPLNAGIA 2542
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 117
+GL N GL N G+ N +GL N N G+GL G N
Sbjct: 2543 NMGLFNLGDNNFGLANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2602
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 175
G G N T GL N TG GL N TG +G+ N TG G+GL N G+G N
Sbjct: 2603 AGNTGFFNSGTANTGLFNAGTGNTGLFNSGTGNVGIGNMGTGSFGIGLSGDNQVGIGGTN 2662
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 232
+ +GL N TG +G N TG +G+ N TG G+ N NTG L NTG
Sbjct: 2663 SGSFNIGLFNSGTGNIGFGNSGTGNVGIGNTGTGNTGIGNSGNYNTGWLNAGLINTGIAN 2722
Query: 233 LRNCNTG 239
N NTG
Sbjct: 2723 PGNHNTG 2729
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 100/242 (41%), Gaps = 12/242 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG- 70
GL N +G N GL N GG L + N G + N G + N G
Sbjct: 1474 GLGNIGQFNVGFSNVGDSNAGLANI--GGFNLGSGNLGSFNVFGGNQGSYNVGPANLGNY 1531
Query: 71 -LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGL---R 124
+GL N + G N LG N + +G N N G+GL N G
Sbjct: 1532 NIGLSNLGSYNFGFSNAGDFNLGFANTGSNNIGFANTGNNNIGIGLSGNNQQGFNFAGGW 1591
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGL 181
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1592 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGLL 1651
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG + NTG + NT GL N NTG L + NTG + NTG L
Sbjct: 1652 NAGNVNTGVGNTGHYNTGSFNAGSFNTAGLNPGNYNTGYLNTGSYNTGLANSGDVNTGAL 1711
Query: 242 IV 243
I
Sbjct: 1712 IA 1713
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 98/244 (40%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1443 APANVSGMFNVGSNLAGFFHDQVTGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGGFN 1502
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N +GL N + G N LG N
Sbjct: 1503 LGSGNLGSFNVFGGNQGSYNVGPANLGNYN-----IGLSNLGSYNFGFSNAGDFNLGFAN 1557
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+ +G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1558 TGSNNIGFANTGNNNIGIGLSGNNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1617
Query: 181 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1618 IGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGLLNAGNVNTGVGNTGHYNTGSFNAGSFN 1677
Query: 238 TGGL 241
T GL
Sbjct: 1678 TAGL 1681
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L + NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGF 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 95/239 (39%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3019 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3078
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G N G +G N G G+GL G G N
Sbjct: 3079 GNVGPGLTAAIGNIGFGNTGNGNIGFGNTGNGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3138
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3139 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3198
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG + NTG + NTGG N NTG N NTG + NTG
Sbjct: 3199 SGDYNTGLFNSGSTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGLANSGDVNTGAF 3257
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N NTG L + NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 91/229 (39%), Gaps = 17/229 (7%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLR 64
L + N G L + N G L + N G L + N G +G N G +G
Sbjct: 3036 LGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFG 3095
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
N G +G N G +G N G G+GL G G N TG +GL N TG +G
Sbjct: 3096 NTGNGNIGFGNTGNGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIG 3155
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N TG G+ N G+ N + G N GL N G G + NTG
Sbjct: 3156 FGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFN 3208
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
+ NTG + NTGG N NTG N NTG + NTG
Sbjct: 3209 SGSTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGLANSGDVNTGAF 3257
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 89/226 (39%), Gaps = 17/226 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3039 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3098
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G N G +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3099 NGNIGFGNTGNGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3158
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG G+ N G+ N + G N GL N G G + NTG +
Sbjct: 3159 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNSGS 3211
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG + NTGG N NTG N NTG + NTG
Sbjct: 3212 TNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGLANSGDVNTGAF 3257
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 74/182 (40%), Gaps = 9/182 (4%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G N G +G N G G+GL G G N TG
Sbjct: 3083 PGLTAAIGNIGFGNTGNGNIGFGNTGNGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3142
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
+GL N TG +G N TG G+ N G+ N + G N GL N G
Sbjct: 3143 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIG 3197
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G + NTG + NTG + NTGG N NTG N NTG + NTG
Sbjct: 3198 NSG--DYNTGLFNSGSTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGLANSGDVNTG 3255
Query: 180 GL 181
Sbjct: 3256 AF 3257
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 85/218 (38%), Gaps = 17/218 (7%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 86
L N G L + N G L N N G + + N GG + + N G G GL
Sbjct: 2431 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGHANIGGANIGDFNVGIANAGPGLTTAVN 2490
Query: 87 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2491 NIGIGNTGNYNIGMGNTGDYNIGFGNTGNNNIGIGLTGDNQIGFGPLNAGIANMGLFNLG 2550
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
GL N G+ N +GL N N G+GL G N G G N
Sbjct: 2551 DNNFGLANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2610
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
T GL N TG GL N TG +G+ N TG G+
Sbjct: 2611 SGTANTGLFNAGTGNTGLFNSGTGNVGIGNMGTGSFGI 2648
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 91/238 (38%), Gaps = 17/238 (7%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
+ N LG N + LG N +G +G N +G G N LG N LG
Sbjct: 1021 IFNAGIANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNVGPANLGNYNIGFANLG 1080
Query: 83 LRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLG 132
N G G N NTG + NTG G+GL N G N T +G
Sbjct: 1081 NYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTNNIG 1140
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
L N T +G+ N TG G+ N +G G+ N + NTG NTG
Sbjct: 1141 LFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVAN 1193
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
N NTG + NTG L + NTG N +TG + TG I GA
Sbjct: 1194 AGNYNTGWYNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1251
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 84/210 (40%), Gaps = 13/210 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N LG N + LG N +G +G N +G G N LG N LG
Sbjct: 1021 IFNAGIANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNVGPANLGNYNIGFANLG 1080
Query: 73 LRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLG 122
N G G N NTG + NTG G+GL N G N T +G
Sbjct: 1081 NYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTNNIG 1140
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N T +G+ N TG G+ N +G G+ N + G N NTG N NTG
Sbjct: 1141 LFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGNYNTG 1200
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
+ NTG L + NTG N +TG
Sbjct: 1201 WYNTGDTNTGIANLGDFNTGFYNTGNFSTG 1230
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GDYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GDYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
>gi|340625385|ref|YP_004743837.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|433625450|ref|YP_007259079.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140060008]
gi|340003575|emb|CCC42696.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|432153056|emb|CCK50269.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140060008]
Length = 3507
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 112/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 SNVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
TG G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAYYAITVPQIPLLNFSLNI 2235
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 120/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N NTG L + NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
+ + S + NE ++ +
Sbjct: 810 GDNHGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNSNVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGDNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N TG G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 107/259 (41%), Gaps = 13/259 (5%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 60
P+ A I+ GL N GL N G+ N +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGLANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL N G+G N + +GL N TG +G+ N TG +G+ N TG G+ N N
Sbjct: 2647 VGLSGDNQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYN 2706
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG L NTG N NTG + NTG + NTG + NTG +
Sbjct: 2707 TGWLNSGLFNTGIANPGNHNTGLFNIGAFNTGIANPGHYNTGSYNTGSYNTGMANAGDYG 2766
Query: 238 TGGLIVPKSKRGAQENASR 256
TG I G A R
Sbjct: 2767 TGAFITGSMNNGLLWRADR 2785
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 108/273 (39%), Gaps = 18/273 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G N TG +G N G G+GL G G N TG +G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGFGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3145 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+ NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3205 LFNSGSTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAFNSGNYSNG 3264
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFTPNL 272
RG + + + +I ++ ++
Sbjct: 3265 FF-----WRGDYQGLGGFAYQSAVSEIPWSYDI 3292
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 96/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3018 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3077
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G N TG +G N G G+GL G G N
Sbjct: 3078 GNVGPGLTAAIGNIGFGNTGNGNIGFGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3137
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3138 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3197
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG + NTG + NTGG N NTG N NTG + NTG
Sbjct: 3198 SGDYNTGLFNSGSTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 104/247 (42%), Gaps = 9/247 (3%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + ++ G+ N +G+ N +G N G+GL N G G N
Sbjct: 2482 PGLTTAVNNIGIGNTGNYNIGMGNTGDYNIGFGNTGNNNIGIGLTGDNQIGFGPLNAGIA 2541
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 117
+GL N GL N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGLANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRN 175
G G N T GL N TG GL N TG +G+ N TGG GL N G+G N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDNQVGIGGTN 2661
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 232
+ +GL N TG +G+ N TG +G+ N TG G+ N NTG L NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGWLNSGLFNTGIAN 2721
Query: 233 LRNCNTG 239
N NTG
Sbjct: 2722 PGNHNTG 2728
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 100/242 (41%), Gaps = 12/242 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG- 70
GL N +G N GL N GG L + N G + N G + N G
Sbjct: 1473 GLGNIGQFNVGFSNVGDSNAGLANI--GGFNLGSGNLGSFNVFGGNQGSYNVGPANLGNY 1530
Query: 71 -LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGL---R 124
+GL N + G N LG N + +G N N G+GL N G
Sbjct: 1531 NIGLSNLGSYNFGFSNAGDFNLGFANTGSNNIGFANTGNNNIGIGLSGNNQQGFNFAGGW 1590
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGL 181
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1591 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGLL 1650
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG + NTG + NT GL N NTG L + NTG + NTG L
Sbjct: 1651 NAGNVNTGVGNTGHYNTGSFNAGSFNTAGLNPGNYNTGYLNTGSYNTGLANSGDVNTGAL 1710
Query: 242 IV 243
I
Sbjct: 1711 IA 1712
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 98/244 (40%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNVGSNLAGFFHDQVTGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGGFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N +GL N + G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNVGPANLGNYN-----IGLSNLGSYNFGFSNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+ +G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGSNNIGFANTGNNNIGIGLSGNNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGLLNAGNVNTGVGNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T GL
Sbjct: 1677 TAGL 1680
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L + NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGF 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 90/226 (39%), Gaps = 17/226 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3098 NGNIGFGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3157
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG G+ N G+ N + G N GL N G G + NTG +
Sbjct: 3158 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNSGS 3210
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG + NTGG N NTG N NTG + NTG
Sbjct: 3211 TNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N NTG L + NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 75/182 (41%), Gaps = 9/182 (4%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G N TG +G N G G+GL G G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGFGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
+GL N TG +G N TG G+ N G+ N + G N GL N G
Sbjct: 3142 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIG 3196
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G + NTG + NTG + NTGG N NTG N NTG + NTG
Sbjct: 3197 NSG--DYNTGLFNSGSTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTG 3254
Query: 180 GL 181
Sbjct: 3255 AF 3256
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 86/218 (39%), Gaps = 17/218 (7%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 86
L N G L + N G L N N G + + N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGHANIGGANIGDFNVGIANAGPGLTTAVN 2489
Query: 87 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGMGNTGDYNIGFGNTGNNNIGIGLTGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
GL N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGLANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
T GL N TG GL N TG +G+ N TGG G+
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGV 2647
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 102/247 (41%), Gaps = 17/247 (6%)
Query: 6 APISTKGLRN--CNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
AP + GL N N G L+N T +GL N LG N + +G N +
Sbjct: 2986 APANVSGLLNIGANLAGW-LQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSAN 3039
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTG 119
+G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3040 IGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNG 3099
Query: 120 GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3100 NIGFGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSG 3159
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
TG G+ N G+ N + G N NTG + NTG + NTG
Sbjct: 3160 TGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNSGSTNTGSFNPG 3219
Query: 235 NCNTGGL 241
+ NTGG
Sbjct: 3220 DYNTGGF 3226
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 84/210 (40%), Gaps = 13/210 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N LG N + LG N +G +G N +G G N LG N LG
Sbjct: 1020 IFNAGIANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNVGPANLGNYNIGFANLG 1079
Query: 73 LRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLG 122
N G G N NTG + NTG G+GL N G N T +G
Sbjct: 1080 NYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTNNIG 1139
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N T +G+ N TG G+ N +G G+ N + G N NTG N NTG
Sbjct: 1140 LFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGNYNTG 1199
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
+ NTG L + NTG N +TG
Sbjct: 1200 WYNTGDTNTGIANLGDFNTGFYNTGNFSTG 1229
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 84/210 (40%), Gaps = 13/210 (6%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
+ N LG N + LG N +G +G N +G G N LG N LG
Sbjct: 1020 IFNAGIANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNVGPANLGNYNIGFANLG 1079
Query: 83 LRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLG 132
N G G N NTG + NTG G+GL N G N T +G
Sbjct: 1080 NYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTNNIG 1139
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 189
L N T +G+ N TG G+ N +G G+ N + G N NTG N NTG
Sbjct: 1140 LFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGNYNTG 1199
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG L + NTG N +TG
Sbjct: 1200 WYNTGDTNTGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GDYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GDYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
>gi|433640476|ref|YP_007286235.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070008]
gi|432157024|emb|CCK54295.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070008]
Length = 3507
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 112/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 SNVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
TG G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAYYAITVPQIPLLNFSLNI 2235
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 120/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N NTG L + NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
+ + S + NE ++ +
Sbjct: 810 GDNHGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNSNVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGDNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N TG G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 107/259 (41%), Gaps = 13/259 (5%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 60
P+ A I+ GL N GL N G+ N +GL N N G+GL G
Sbjct: 2535 PLNAGIANMGLFNLGDNNFGLANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 2594
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 2595 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 2646
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL N G+G N + +GL N TG +G+ N TG +G+ N TG G+ N N
Sbjct: 2647 VGLSGDNQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYN 2706
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG L NTG N NTG + NTG + NTG + NTG +
Sbjct: 2707 TGWLNSGLFNTGIANPGNHNTGLFNIGAFNTGIANPGHYNTGSYNTGSYNTGMANAGDYG 2766
Query: 238 TGGLIVPKSKRGAQENASR 256
TG I G A R
Sbjct: 2767 TGAFITGSMNNGLLWRADR 2785
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 108/273 (39%), Gaps = 18/273 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 3025 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3084
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G N TG +G N G G+GL G G N TG +G
Sbjct: 3085 TAAIGNIGFGNTGNGNIGFGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3145 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+ NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3205 LFNSGSTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAFNSGNYSNG 3264
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFTPNL 272
RG + + + +I ++ ++
Sbjct: 3265 FF-----WRGDYQGLGGFAYQSAVSEIPWSYDI 3292
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 96/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 3018 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3077
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G N TG +G N G G+GL G G N
Sbjct: 3078 GNVGPGLTAAIGNIGFGNTGNGNIGFGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3137
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3138 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3197
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG + NTG + NTGG N NTG N NTG + NTG
Sbjct: 3198 SGDYNTGLFNSGSTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 104/247 (42%), Gaps = 9/247 (3%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + ++ G+ N +G+ N +G N G+GL N G G N
Sbjct: 2482 PGLTTAVNNIGIGNTGNYNIGMGNTGDYNIGFGNTGNNNIGIGLTGDNQIGFGPLNAGIA 2541
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 117
+GL N GL N G+ N +GL N N G+GL G N
Sbjct: 2542 NMGLFNLGDNNFGLANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2601
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRN 175
G G N T GL N TG GL N TG +G+ N TGG GL N G+G N
Sbjct: 2602 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDNQVGIGGTN 2661
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 232
+ +GL N TG +G+ N TG +G+ N TG G+ N NTG L NTG
Sbjct: 2662 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGWLNSGLFNTGIAN 2721
Query: 233 LRNCNTG 239
N NTG
Sbjct: 2722 PGNHNTG 2728
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 100/242 (41%), Gaps = 12/242 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG- 70
GL N +G N GL N GG L + N G + N G + N G
Sbjct: 1473 GLGNIGQFNVGFSNVGDSNAGLANI--GGFNLGSGNLGSFNVFGGNQGSYNVGPANLGNY 1530
Query: 71 -LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGL---R 124
+GL N + G N LG N + +G N N G+GL N G
Sbjct: 1531 NIGLSNLGSYNFGFSNAGDFNLGFANTGSNNIGFANTGNNNIGIGLSGNNQQGFNFAGGW 1590
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGL 181
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1591 NSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGLL 1650
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG + NTG + NT GL N NTG L + NTG + NTG L
Sbjct: 1651 NAGNVNTGVGNTGHYNTGSFNAGSFNTAGLNPGNYNTGYLNTGSYNTGLANSGDVNTGAL 1710
Query: 242 IV 243
I
Sbjct: 1711 IA 1712
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 98/244 (40%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNVGSNLAGFFHDQVTGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGGFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N +GL N + G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNVGPANLGNYN-----IGLSNLGSYNFGFSNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+ +G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGSNNIGFANTGNNNIGIGLSGNNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGLLNAGNVNTGVGNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T GL
Sbjct: 1677 TAGL 1680
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L + NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGF 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 90/226 (39%), Gaps = 17/226 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 3038 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3097
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3098 NGNIGFGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3157
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG G+ N G+ N + G N GL N G G + NTG +
Sbjct: 3158 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIGNSG--DYNTGLFNSGS 3210
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG + NTGG N NTG N NTG + NTG
Sbjct: 3211 TNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTGAF 3256
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N NTG L + NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 75/182 (41%), Gaps = 9/182 (4%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G N TG +G N G G+GL G G N TG
Sbjct: 3082 PGLTAAIGNIGFGNTGNGNIGFGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3141
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
+GL N TG +G N TG G+ N G+ N + G N GL N G
Sbjct: 3142 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNT-----GLVNTGIG 3196
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G + NTG + NTG + NTGG N NTG N NTG + NTG
Sbjct: 3197 NSG--DYNTGLFNSGSTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGFANSGDVNTG 3254
Query: 180 GL 181
Sbjct: 3255 AF 3256
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 86/218 (39%), Gaps = 17/218 (7%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 86
L N G L + N G L N N G + + N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGHANIGGANIGDFNVGIANAGPGLTTAVN 2489
Query: 87 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 2490 NIGIGNTGNYNIGMGNTGDYNIGFGNTGNNNIGIGLTGDNQIGFGPLNAGIANMGLFNLG 2549
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
GL N G+ N +GL N N G+GL G N G G N
Sbjct: 2550 DNNFGLANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 2609
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
T GL N TG GL N TG +G+ N TGG G+
Sbjct: 2610 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGV 2647
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 102/247 (41%), Gaps = 17/247 (6%)
Query: 6 APISTKGLRN--CNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
AP + GL N N G L+N T +GL N LG N + +G N +
Sbjct: 2986 APANVSGLLNIGANLAGW-LQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSAN 3039
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTG 119
+G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 3040 IGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNG 3099
Query: 120 GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3100 NIGFGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSG 3159
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
TG G+ N G+ N + G N NTG + NTG + NTG
Sbjct: 3160 TGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNSGSTNTGSFNPG 3219
Query: 235 NCNTGGL 241
+ NTGG
Sbjct: 3220 DYNTGGF 3226
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 84/210 (40%), Gaps = 13/210 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N LG N + LG N +G +G N +G G N LG N LG
Sbjct: 1020 IFNAGIANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNVGPANLGNYNIGFANLG 1079
Query: 73 LRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLG 122
N G G N NTG + NTG G+GL N G N T +G
Sbjct: 1080 NYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTNNIG 1139
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N T +G+ N TG G+ N +G G+ N + G N NTG N NTG
Sbjct: 1140 LFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGNYNTG 1199
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
+ NTG L + NTG N +TG
Sbjct: 1200 WYNTGDTNTGIANLGDFNTGFYNTGNFSTG 1229
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 84/210 (40%), Gaps = 13/210 (6%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
+ N LG N + LG N +G +G N +G G N LG N LG
Sbjct: 1020 IFNAGIANLGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNVGPANLGNYNIGFANLG 1079
Query: 83 LRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLG 132
N G G N NTG + NTG G+GL N G N T +G
Sbjct: 1080 NYNIGFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTNNIG 1139
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 189
L N T +G+ N TG G+ N +G G+ N + G N NTG N NTG
Sbjct: 1140 LFNSGTNNVGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGNYNTG 1199
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG L + NTG N +TG
Sbjct: 1200 WYNTGDTNTGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GDYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GDYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
>gi|289568267|ref|ZP_06448494.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289542020|gb|EFD45669.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 771
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 121/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 479 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 538
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 539 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 598
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG
Sbjct: 599 GTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 658
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG + NTG + N G L+
Sbjct: 659 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGDVNTGAFDTGDFNNGFLVA 718
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 719 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 747
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG
Sbjct: 586 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 645
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG + NTG
Sbjct: 646 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGDVNTGA 705
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 706 FDTGDFNNGFL 716
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L + N
Sbjct: 593 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFN 652
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG + NTG + N
Sbjct: 653 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGDVNTGAFDTGDFN 712
Query: 128 TGGL 131
G L
Sbjct: 713 NGFL 716
Score = 40.0 bits (92), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 211 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 270
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 271 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 319
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 211 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 270
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 271 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 328
>gi|385989862|ref|YP_005908160.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|339297055|gb|AEJ49165.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length = 3248
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 120/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG + N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 2971 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3030
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3031 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3090
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3091 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3150
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3151 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3209
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 2978 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3037
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3038 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3097
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3098 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3157
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3158 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNG 3217
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 3218 FF-----WRGDYQGLGGFAYQSAVSEIPWS 3242
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 2991 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3050
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3051 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3110
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLG 172
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3111 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFN 3170
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG N NTG N NTG + NTG
Sbjct: 3171 PGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3209
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 94/228 (41%), Gaps = 17/228 (7%)
Query: 31 LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N N G+GL G N G G N T GL N TG GL N T
Sbjct: 2526 IGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGT 2585
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
G +G+ N TGG G+GL + G+G N + +GL N TG +G+ N T
Sbjct: 2586 GNVGIGNMGTGGF--------GVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGT 2637
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
G +G+ N TG G+ N N NTG L NTG N NTG + NT
Sbjct: 2638 GNVGIGNTGTGNTGIGNS-------GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNT 2690
Query: 209 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASR 256
G + NTG + NTG + TG I G A R
Sbjct: 2691 GIANPGHYNTGSYNTGSYNTGMANAGDYGTGAFITGSMNNGLLWRADR 2738
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG + N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3035 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3094
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 3095 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 3154
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3155 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3209
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 101/238 (42%), Gaps = 17/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GL 71
N G + + N G L + N G L N N G + N N GG + + N G G
Sbjct: 2428 ANLGQFNVGSANLGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGP 2487
Query: 72 GLRNC-------NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNC--NTGGLGLRNCNTGG 120
GL NTG + NTG + NTG +GL N N G+GL G
Sbjct: 2488 GLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLSG 2547
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G N T GL N TG GL N TG +G+ N TGG G+
Sbjct: 2548 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQ 2607
Query: 181 LGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G+ N+G +GL N TG +G+ N TG +G+ N TG G+ N GL N
Sbjct: 2608 VGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNA 2665
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG + N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 106/247 (42%), Gaps = 20/247 (8%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-------NTGGLGLRNCNTGGL 61
L N N G + N N GG + + N G G GL NTG + NTG
Sbjct: 2455 LGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNY 2514
Query: 62 GLRNCNTGG--LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+ NTG +GL N N G+GL G N G G N T GL N
Sbjct: 2515 NIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSG 2574
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRN 175
TG GL N TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N
Sbjct: 2575 TGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGN 2634
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLG 232
TG +G+ N TG G+ N GL N NTG N NTG + NTG
Sbjct: 2635 SGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIAN 2694
Query: 233 LRNCNTG 239
+ NTG
Sbjct: 2695 PGHYNTG 2701
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 104/244 (42%), Gaps = 20/244 (8%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC----- 66
N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2438 ANLGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIG 2497
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
NTG + NTG + NTG +GL N N G+GL G N G
Sbjct: 2498 IGNTGNYNIGVGNTGNYNIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGN 2557
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
G N T GL N TG GL N TG +G+ N TGG G+ +G+ N+G
Sbjct: 2558 TGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGS 2617
Query: 181 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
+GL N TG +G+ N TG +G+ N TG G+ N GL N NTG N
Sbjct: 2618 FNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGN 2677
Query: 236 CNTG 239
NTG
Sbjct: 2678 HNTG 2681
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2939 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 2993
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 2994 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3053
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3054 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3113
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3114 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3173
Query: 236 CNTGGL 241
NTGG
Sbjct: 3174 YNTGGF 3179
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 95/222 (42%), Gaps = 9/222 (4%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GL 81
N G + + N G L + N G L N N G + N N GG + + N G G
Sbjct: 2428 ANLGQFNVGSANLGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGP 2487
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTG 139
GL +G+ N +G+ N +G N +GL N N G+GL
Sbjct: 2488 GLTAA-VNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLS 2546
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
G N G G N T GL N TG GL N TG +G+ N TGG G+
Sbjct: 2547 GFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDS 2606
Query: 200 GLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+G+ N+G +GL N TG +G+ N TG +G+ N TG
Sbjct: 2607 QVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTG 2648
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|294995112|ref|ZP_06800803.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|385993456|ref|YP_005911754.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|424802905|ref|ZP_18228336.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|326902181|gb|EGE49114.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|339293410|gb|AEJ45521.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 3243
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 120/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG + N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 2966 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 3025
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 3026 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 3085
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 3086 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 3145
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3146 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3204
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 2973 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 3032
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 3033 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 3092
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 3093 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 3152
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 3153 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNG 3212
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 3213 FF-----WRGDYQGLGGFAYQSAVSEIPWS 3237
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 2986 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 3045
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 3046 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 3105
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLG 172
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 3106 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFN 3165
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG N NTG N NTG + NTG
Sbjct: 3166 PGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3204
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 94/228 (41%), Gaps = 17/228 (7%)
Query: 31 LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N N G+GL G N G G N T GL N TG GL N T
Sbjct: 2521 IGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGT 2580
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
G +G+ N TGG G+GL + G+G N + +GL N TG +G+ N T
Sbjct: 2581 GNVGIGNMGTGGF--------GVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGT 2632
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
G +G+ N TG G+ N N NTG L NTG N NTG + NT
Sbjct: 2633 GNVGIGNTGTGNTGIGNS-------GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNT 2685
Query: 209 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASR 256
G + NTG + NTG + TG I G A R
Sbjct: 2686 GIANPGHYNTGSYNTGSYNTGMANAGDYGTGAFITGSMNNGLLWRADR 2733
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG + N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 3030 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 3089
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 3090 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 3149
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 3150 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 3204
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 105/247 (42%), Gaps = 20/247 (8%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 2430 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 2489
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNC--NTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG +GL N N G+GL G N
Sbjct: 2490 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 2549
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2550 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2609
Query: 178 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 232
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 2610 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 2669
Query: 233 LRNCNTG 239
N NTG
Sbjct: 2670 PGNHNTG 2676
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG + N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 106/247 (42%), Gaps = 20/247 (8%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-------NTGGLGLRNCNTGGL 61
L N N G + N N GG + + N G G GL NTG + NTG
Sbjct: 2450 LGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNY 2509
Query: 62 GLRNCNTGG--LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+ NTG +GL N N G+GL G N G G N T GL N
Sbjct: 2510 NIGFGNTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSG 2569
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRN 175
TG GL N TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N
Sbjct: 2570 TGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGN 2629
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLG 232
TG +G+ N TG G+ N GL N NTG N NTG + NTG
Sbjct: 2630 SGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIAN 2689
Query: 233 LRNCNTG 239
+ NTG
Sbjct: 2690 PGHYNTG 2696
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2934 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 2988
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 2989 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 3048
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 3049 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 3108
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 3109 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 3168
Query: 236 CNTGGL 241
NTGG
Sbjct: 3169 YNTGGF 3174
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 89/230 (38%), Gaps = 17/230 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+G+ N TG G+ N +G G+ N + NTG NTG + NTG
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGS-------TNTGFFNTGIVNTGVANAGSYNTGW 1200
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L + NTG N +TG + TG I GA
Sbjct: 1201 YNTGDTNTGIANLGDFNTGFYNTGNFSTGFANQGDIATGAFITGDMGNGA 1250
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
>gi|308377402|ref|ZP_07668505.1| hypothetical protein TMIG_01245 [Mycobacterium tuberculosis SUMu009]
gi|308355902|gb|EFP44753.1| hypothetical protein TMIG_01245 [Mycobacterium tuberculosis SUMu009]
Length = 2388
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1104 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 1163
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 1164 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 1223
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 1224 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 1276
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 1277 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 1336
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 1337 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 1370
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1073 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1132
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1133 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 1187
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 1188 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 1247
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 1248 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 1279
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 604 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 663
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 664 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 723
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 724 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 783
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 784 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 843
Query: 240 GLI 242
G I
Sbjct: 844 GFI 846
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 577 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 636
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 637 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 691
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 692 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 751
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 752 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 811
Query: 238 TGGL 241
T G
Sbjct: 812 TAGF 815
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 1617 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 1676
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 1677 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 1736
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 1737 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 1796
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 1797 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 1856
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 1857 PGNHNTGLFNIGTFNTG 1873
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 619 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 678
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 679 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 738
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 739 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 798
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 799 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 845
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 108/267 (40%), Gaps = 27/267 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 1670 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 1729
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 1730 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 1781
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 1782 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 1837
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 1838 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 1894
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASRS 257
+ TG I G A R
Sbjct: 1895 ANAGDYGTGAFITGSMNNGLLWRADRQ 1921
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 106/266 (39%), Gaps = 39/266 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 66
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 1565 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 1624
Query: 67 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 1625 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 1684
Query: 118 TGGLGLRN--------CNTG--GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N NTG +GL N N G+GL G N G G N
Sbjct: 1685 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 1744
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGL 213
T GL N TG GL N TG +G+ N TGG G+ N + +GL
Sbjct: 1745 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGL 1804
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N TG +G+ N TG +G+ N TG
Sbjct: 1805 FNSGTGNVGIGNSGTGNVGIGNTGTG 1830
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 108/272 (39%), Gaps = 18/272 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 2121 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 2175
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 2176 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 2235
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCN 177
+G+ N TG +G N TG G+ N G+ N + G N NTG + N
Sbjct: 2236 IGIGNTGTGNIGFGNTGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYN 2295
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG N NTG + NTGG N NTG N NTG + NTG N +
Sbjct: 2296 TGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYS 2355
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKFT 269
G RG + + + +I ++
Sbjct: 2356 NGFF-----WRGDYQGLGGFAYQSAVSEIPWS 2382
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 84/216 (38%), Gaps = 17/216 (7%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-- 96
L N G L + N G L N N G + N N GG + + N G G GL
Sbjct: 1565 LGQFNVGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVN 1624
Query: 97 -----NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
NTG + NTG + NTG G+GL N G G N +GL N
Sbjct: 1625 NIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLG 1684
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N G+ N +GL N N G+GL G N G G N
Sbjct: 1685 DNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFN 1744
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL N TG GL N TG +G+ N TGG
Sbjct: 1745 SGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 1780
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 1225 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 1284
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 1285 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 1331
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 163 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 222
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 223 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 282
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 283 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 342
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 343 TGIANLGDFNTGFYNTGNFSTG 364
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 163 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 222
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 223 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 282
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 197
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 283 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 342
Query: 198 TGGLGLRNCNTGGLGLRNCNTG 219
TG L + NTG N +TG
Sbjct: 343 TGIANLGDFNTGFYNTGNFSTG 364
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 55/133 (41%), Gaps = 3/133 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
P + A I G N G +G+ N TG +G N TG G+ N G+ N +
Sbjct: 2217 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGTGNWGIGNSGDYNTGIGNTGSTNS 2276
Query: 62 GLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
G N NTG + NTG N NTG + NTGG N NTG N NT
Sbjct: 2277 GFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNT 2336
Query: 119 GGLGLRNCNTGGL 131
G + NTG
Sbjct: 2337 GIANSGDVNTGAF 2349
>gi|119485304|ref|ZP_01619632.1| hypothetical protein L8106_09191 [Lyngbya sp. PCC 8106]
gi|119457060|gb|EAW38186.1| hypothetical protein L8106_09191 [Lyngbya sp. PCC 8106]
Length = 285
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 83/191 (43%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N G+ L + N G+ L N G+ L N G+ L + N G+ L N
Sbjct: 50 ANFAGLNLGGANFQGVNLSDTNFSGVNLGGANFAGVDLIGANFQGVNLNDTNFVGVNLSN 109
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
N G+ L N G L + N G+ L N N G+ L + N G L + N G+ L N
Sbjct: 110 TNFAGVDLIGANFFGSNLTDTNFVGVNLTNTNFAGVDLIDANFFGANLTDTNFVGVNLSN 169
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
N G+ L N G L N G+ L N G+ L + N G+ L N G+ L
Sbjct: 170 TNFAGVDLIRANFLGANLTESNFVGVNLSEANLTGVNLTDSNFIGVNLSKANLTGVNLAG 229
Query: 206 CNTGGLGLRNC 216
N G+ L +
Sbjct: 230 INLIGVNLTDT 240
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 83/191 (43%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 95
N GL L N G+ L + N G+ L N G+ L N G+ L + N G+ L N
Sbjct: 50 ANFAGLNLGGANFQGVNLSDTNFSGVNLGGANFAGVDLIGANFQGVNLNDTNFVGVNLSN 109
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
N G+ L N G L + N G+ L N N G+ L + N G L + N G+ L N
Sbjct: 110 TNFAGVDLIGANFFGSNLTDTNFVGVNLTNTNFAGVDLIDANFFGANLTDTNFVGVNLSN 169
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
N G+ L N G L N G+ L N G+ L + N G+ L N G+ L
Sbjct: 170 TNFAGVDLIRANFLGANLTESNFVGVNLSEANLTGVNLTDSNFIGVNLSKANLTGVNLAG 229
Query: 216 CNTGGLGLRNC 226
N G+ L +
Sbjct: 230 INLIGVNLTDT 240
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 83/191 (43%)
Query: 46 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
N GL L N G+ L + N G+ L N G+ L N G+ L + N G+ L N
Sbjct: 50 ANFAGLNLGGANFQGVNLSDTNFSGVNLGGANFAGVDLIGANFQGVNLNDTNFVGVNLSN 109
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
N G+ L N G L + N G+ L N N G+ L + N G L + N G+ L N
Sbjct: 110 TNFAGVDLIGANFFGSNLTDTNFVGVNLTNTNFAGVDLIDANFFGANLTDTNFVGVNLSN 169
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
N G+ L N G L N G+ L N G+ L + N G+ L N G+ L
Sbjct: 170 TNFAGVDLIRANFLGANLTESNFVGVNLSEANLTGVNLTDSNFIGVNLSKANLTGVNLAG 229
Query: 226 CNTGGLGLRNC 236
N G+ L +
Sbjct: 230 INLIGVNLTDT 240
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 81/186 (43%)
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
N GL L N G+ L + N G+ L N G+ L N G+ L + N G+ L N
Sbjct: 50 ANFAGLNLGGANFQGVNLSDTNFSGVNLGGANFAGVDLIGANFQGVNLNDTNFVGVNLSN 109
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
N G+ L N G L + N G+ L N N G+ L + N G L + N G+ L N
Sbjct: 110 TNFAGVDLIGANFFGSNLTDTNFVGVNLTNTNFAGVDLIDANFFGANLTDTNFVGVNLSN 169
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
N G+ L N G L N G+ L N G+ L + N G+ L N G+ L
Sbjct: 170 TNFAGVDLIRANFLGANLTESNFVGVNLSEANLTGVNLTDSNFIGVNLSKANLTGVNLAG 229
Query: 236 CNTGGL 241
N G+
Sbjct: 230 INLIGV 235
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 76/171 (44%)
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N GL L N G+ L + N G+ L N G+ L N G+ L + N G+ L N
Sbjct: 50 ANFAGLNLGGANFQGVNLSDTNFSGVNLGGANFAGVDLIGANFQGVNLNDTNFVGVNLSN 109
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
N G+ L N G L + N G+ L N N G+ L + N G L + N G+ L N
Sbjct: 110 TNFAGVDLIGANFFGSNLTDTNFVGVNLTNTNFAGVDLIDANFFGANLTDTNFVGVNLSN 169
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
N G+ L N G L N G+ L N G+ L + N G+ + K+
Sbjct: 170 TNFAGVDLIRANFLGANLTESNFVGVNLSEANLTGVNLTDSNFIGVNLSKA 220
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 17 NTGGLGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
+T +G+ N N G+ L N G L + N G+ L N N G+ L + N G L
Sbjct: 99 DTNFVGVNLSNTNFAGVDLIGANFFGSNLTDTNFVGVNLTNTNFAGVDLIDANFFGANLT 158
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
+ N G+ L N N G+ L N G L N G+ L N G+ L + N G+ L
Sbjct: 159 DTNFVGVNLSNTNFAGVDLIRANFLGANLTESNFVGVNLSEANLTGVNLTDSNFIGVNLS 218
Query: 135 NCNTGGLGLRNCNTGGLGLRNC 156
N G+ L N G+ L +
Sbjct: 219 KANLTGVNLAGINLIGVNLTDT 240
>gi|289756421|ref|ZP_06515799.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289711985|gb|EFD75997.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 2568
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 111/274 (40%), Gaps = 22/274 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 70
N G +G N +G G N LG N G LG N N G L N+G
Sbjct: 1969 ANVGHGNIGSFNVFSGNRGSYNIGPANLGNYNIGLGNLGSYNFGFGNAGDFNLGFANSGS 2028
Query: 71 LGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ NTG G+GL N G G N T GL N T +GL N TG +G+ N
Sbjct: 2029 NNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNS 2088
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G G+ N G GL N TG GL N TG +G+ N T NTGG + +
Sbjct: 2089 GIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGT-------YNTGGYNVGST 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI---- 242
NTG + NTG + NTG + NTG + NTG + NTG I
Sbjct: 2142 NTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFIGGNF 2201
Query: 243 ----VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
+S Q A + P + + F+ N+
Sbjct: 2202 SNGAFWQSDHQGQWGAHYAITVPQIPLLNFSLNI 2235
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 120/269 (44%), Gaps = 19/269 (7%)
Query: 18 TGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+G LG +N +G +G N +G +G+ N +G LG N +G LG+ N G +G N
Sbjct: 570 SGNLGSQNILGSGNVGSFNIGSGNIGVFNVGSGSLGNYNIGSGNLGIYNIGFGNVGDYNV 629
Query: 77 NTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNC 126
G G N NTG + NTG G+GL N G + N TG GL N
Sbjct: 630 GFGNAGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNIASGWNSGTGNSGLFNS 689
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
T +G+ N TG +G+ N TG + N T G+ N NTG L + NTG
Sbjct: 690 GTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNT 749
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG + N NTG + + NTG + NTG N NTG + N G L+
Sbjct: 750 GSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Query: 244 PKSKRGAQENASRSE-----NEPCLVKIK 267
++ + S + NE ++ +
Sbjct: 810 GDNQGQIAIDLSVTTPFIPINEQMVIDVH 838
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N G +G N G +G N G LG N G +G N +G G N LG
Sbjct: 1938 ILNLGFGNVGSGNVGHGNIGDSNVGLGNLGNANVGHGNIGSFNVFSGNRGSYNIGPANLG 1997
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 150
N G LG N G N LG N + +G N N G+GL N G
Sbjct: 1998 NYNIGLGNLGSYN-----FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQG 2052
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
G N T GL N T +GL N TG +G+ N G G+ N G GL N TG
Sbjct: 2053 FGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGN 2112
Query: 211 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 WGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 100/243 (41%), Gaps = 13/243 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+ N G +G N +G N +G N +G LG N G G N LG
Sbjct: 1469 MFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLG 1528
Query: 73 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL-- 123
N G LG N N G L NTG + NTG G+GL N G
Sbjct: 1529 NYNIGLGNLGSYNFGFGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAG 1588
Query: 124 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
N +G GL N T +GL N TG +G+ N TG G+ N NTG + NTG
Sbjct: 1589 GWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTG 1648
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NT G + NTG L + NTG + NTG
Sbjct: 1649 LLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTG 1708
Query: 240 GLI 242
G I
Sbjct: 1709 GFI 1711
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 95/244 (38%), Gaps = 13/244 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + G+ N + G + G+ + N G +G N +G N +G N
Sbjct: 1442 APANVSGMFNIGSNLAGFFHDQATGMSMFNLGLGNIGQFNVGFSNVGDSNAGLANIGSFN 1501
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G LG N G G N LG N G LG N G N LG N
Sbjct: 1502 LGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYN-----FGFGNAGDFNLGFAN 1556
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N N G+GL N G N +G GL N T +GL N TG
Sbjct: 1557 TGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGN 1616
Query: 181 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+G+ N TG G+ N NTG + NTG L N NTG + NTG + N
Sbjct: 1617 IGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFN 1676
Query: 238 TGGL 241
T G
Sbjct: 1677 TAGF 1680
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 93/227 (40%), Gaps = 13/227 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 66
S G N +G N +G LG N G G N LG N G LG N
Sbjct: 1484 FSNVGDSNAGLANIGSFNLGSGNLGSFNVFGGNQGSYNIGPANLGNYNIGLGNLGSYNFG 1543
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCN 117
N G L NTG + NTG G+GL N G N +G GL N
Sbjct: 1544 FGNAGDFNLGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGSGNSGLFNSG 1603
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
T +GL N TG +G+ N TG G+ N NTG + NTG L N NTG
Sbjct: 1604 TNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTG 1663
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG + NT G + NTG L + NTG + NTGG
Sbjct: 1664 HYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 60/131 (45%), Gaps = 3/131 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N TG GL N T +G+ N TG +G+ N TG + N T G+ N NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGI 736
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L + NTG + NTGG + N NTG + + NTG + NTG N NTG
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGA 796
Query: 131 LGLRNCNTGGL 141
+ N G L
Sbjct: 797 FDTGDFNNGFL 807
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 67
GL N T +G+ N TG +G+ N TG + N T G+ N NTG L + N
Sbjct: 684 SGLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFN 743
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG + NTGG + N NTG + + NTG + NTG N NTG + N
Sbjct: 744 TGFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFN 803
Query: 128 TGGL 131
G L
Sbjct: 804 NGFL 807
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG N NTGG + NTG L N NTG N NTG I
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 183
TG +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG N NTGG + NTG L N NTG N NTG N N G L
Sbjct: 362 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFITGNFNNGFL 419
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 64
I G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 IGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTG + NTG + NTG + NTG + NTG
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAF 2196
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 81 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 130
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 188 TGGLGLRNCNTGGLGLRNCNTG 209
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 82/202 (40%), Gaps = 13/202 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N + LG N +G +G N +G G N LG N LG N G
Sbjct: 1028 LGQLNIGSANLGDFNLGSGNVGSFNVFSGNQGSYNIGPANLGNYNIGFANLGNYNIGFGN 1087
Query: 91 LGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGG 140
G N NTG + NTG G+GL N G N T +GL N T
Sbjct: 1088 AGDFNQGFANTGNNNIGFANTGNNNIGIGLSGDNQQGFNFAGGWNSGTANIGLFNSGTNN 1147
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCN 197
+G+ N TG G+ N +G G+ N + G N NTG + NTG + N
Sbjct: 1148 VGIGNSGTGNWGIGNSGSGNTGIGNTGSTNTGFFNTGIVNTGVANAGSYNTGWYNTGDTN 1207
Query: 198 TGGLGLRNCNTGGLGLRNCNTG 219
TG L + NTG N +TG
Sbjct: 1208 TGIANLGDFNTGFYNTGNFSTG 1229
>gi|289449043|ref|ZP_06438787.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289422001|gb|EFD19202.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 2169
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 105/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G+ N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGVLNSGTGNLGLFNSGTGNIGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 395 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 449
Query: 247 KRGAQEN 253
G + N
Sbjct: 450 PIGLELN 456
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 71/167 (42%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 199 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 255
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G+ N TG
Sbjct: 256 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGVLNSGTG 314
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 315 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 2017 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 2075
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 2076 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 2133
Query: 178 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 210
TG GL N + GL N NTG L N NTGG
Sbjct: 2134 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGG 2169
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 2017 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 2075
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 2076 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 2133
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 220
TG GL N + GL N NTG L N NTGG
Sbjct: 2134 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGG 2169
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 2017 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 2075
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 2076 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 2133
Query: 198 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 230
TG GL N + GL N NTG L N NTGG
Sbjct: 2134 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGG 2169
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 2017 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 2075
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 2076 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 2133
Query: 208 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 240
TG GL N + GL N NTG L N NTGG
Sbjct: 2134 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGG 2169
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 999
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 1586
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 48 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 105
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 1585
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 1585
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 1585
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 844 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 903
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 904 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 956
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 957 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 1431 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 1490
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 1491 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 1543
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 1544 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 1585
>gi|308176934|ref|YP_003916340.1| hypothetical protein AARI_11570 [Arthrobacter arilaitensis Re117]
gi|307744397|emb|CBT75369.1| hypothetical protein AARI_11570 [Arthrobacter arilaitensis Re117]
Length = 774
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 114/243 (46%), Gaps = 21/243 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG--LGLRNCNTG 69
R+ N G R+ N GG R+ N GG RN + GG R+ N GG G RN + G
Sbjct: 95 RDDNRAGGFKRDDNRGGGFKRDDNRGGGFRSDRNDDRGGF-KRDDNRGGGFRGDRNDDRG 153
Query: 70 GL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG--LGL 123
G R+ N G R+ N GG R+ N GG RN + GG R+ N GG G
Sbjct: 154 GFRGERRDDNRAGGFKRDDNRGGGFKRDDNRGGGFRSDRNDDRGGF-KRDDNRGGGFRGD 212
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL- 181
RN + GG R+ N GG R+ N GG RN + GG RN + GG R+ + GG
Sbjct: 213 RNDDRGGF-KRDDNRGGGFKRDDNRGGGFKRNDDRGGFRSDRNDDRGGF-KRDDSRGGFR 270
Query: 182 -GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
R+ N GG RN + GG R+ N GG RN + GG R N GG RN +
Sbjct: 271 GERRDDNRGGGFKRNDDRGGF-KRDDNRGGGFRSDRNDDRGGF-KREDNRGGGFKRNDDR 328
Query: 239 GGL 241
GG
Sbjct: 329 GGF 331
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 115/245 (46%), Gaps = 21/245 (8%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGL--GLRNCNTGGLGLRNCNTG 69
R+ N GG R+ N GG R+ N GG RN + GG R+ N G R+ N G
Sbjct: 51 RDDNRGGGFKRDDNRGGGFKRDDNRGGGFRSDRNDDRGGFRGERRDDNRAGGFKRDDNRG 110
Query: 70 GLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGL--GLRNCNTGGLGL 123
G R+ N GG RN + GG R+ N GG G RN + GG R+ N G
Sbjct: 111 GGFKRDDNRGGGFRSDRNDDRGGF-KRDDNRGGGFRGDRNDDRGGFRGERRDDNRAGGFK 169
Query: 124 RNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTG 179
R+ N GG R+ N GG RN + GG R+ N GG G RN + GG R+ N G
Sbjct: 170 RDDNRGGGFKRDDNRGGGFRSDRNDDRGGF-KRDDNRGGGFRGDRNDDRGGF-KRDDNRG 227
Query: 180 GLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRNC 236
G R+ N GG RN + GG RN + GG R+ + GG R+ N GG RN
Sbjct: 228 GGFKRDDNRGGGFKRNDDRGGFRSDRNDDRGGF-KRDDSRGGFRGERRDDNRGGGFKRND 286
Query: 237 NTGGL 241
+ GG
Sbjct: 287 DRGGF 291
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 114/248 (45%), Gaps = 19/248 (7%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNC 66
S G + G R+ N GG R+ N GG R+ N GG R+ N GG RN
Sbjct: 26 SRDGFKRREDRGDFKRDDNRGGGFKRDDNRGGGFKRDDNRGGGFKRDDNRGGGFRSDRND 85
Query: 67 NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG-- 120
+ GG R+ N G R+ N GG R+ N GG RN + GG R+ N GG
Sbjct: 86 DRGGFRGERRDDNRAGGFKRDDNRGGGFKRDDNRGGGFRSDRNDDRGGF-KRDDNRGGGF 144
Query: 121 LGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNC 176
G RN + GG R+ N G R+ N GG R+ N GG RN + GG R+
Sbjct: 145 RGDRNDDRGGFRGERRDDNRAGGFKRDDNRGGGFKRDDNRGGGFRSDRNDDRGGF-KRDD 203
Query: 177 NTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGL 233
N GG G RN + GG R+ N GG R+ N GG RN + GG RN + GG
Sbjct: 204 NRGGGFRGDRNDDRGGF-KRDDNRGGGFKRDDNRGGGFKRNDDRGGFRSDRNDDRGGF-K 261
Query: 234 RNCNTGGL 241
R+ + GG
Sbjct: 262 RDDSRGGF 269
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 112/248 (45%), Gaps = 18/248 (7%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LG 72
N N G + G R+ N GG R+ N GG R+ N GG R+ N GG
Sbjct: 22 NRNNSRDGFKRREDRGDFKRDDNRGGGFKRDDNRGGGFKRDDNRGGGFKRDDNRGGGFRS 81
Query: 73 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
RN + GG R+ N G R+ N GG R+ N GG RN + GG R+ N
Sbjct: 82 DRNDDRGGFRGERRDDNRAGGFKRDDNRGGGFKRDDNRGGGFRSDRNDDRGGF-KRDDNR 140
Query: 129 GG--LGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 182
GG G RN + GG R+ N G R+ N GG R+ N GG RN + GG
Sbjct: 141 GGGFRGDRNDDRGGFRGERRDDNRAGGFKRDDNRGGGFKRDDNRGGGFRSDRNDDRGGF- 199
Query: 183 LRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTG 239
R+ N GG G RN + GG R+ N GG R+ N GG RN + GG RN + G
Sbjct: 200 KRDDNRGGGFRGDRNDDRGGF-KRDDNRGGGFKRDDNRGGGFKRNDDRGGFRSDRNDDRG 258
Query: 240 GLIVPKSK 247
G S+
Sbjct: 259 GFKRDDSR 266
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 14 RNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGG 70
R+ N GG G RN + GG R+ N GG R+ N GG RN + GG RN + GG
Sbjct: 201 RDDNRGGGFRGDRNDDRGGF-KRDDNRGGGFKRDDNRGGGFKRNDDRGGFRSDRNDDRGG 259
Query: 71 LGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNC 126
R+ + GG R+ N GG RN + GG R+ N GG RN + GG R
Sbjct: 260 F-KRDDSRGGFRGERRDDNRGGGFKRNDDRGGF-KRDDNRGGGFRSDRNDDRGGF-KRED 316
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 182
N GG RN + GG R+ N GG G RN + GG R+ N GG G RN + GG
Sbjct: 317 NRGGGFKRNDDRGGF-KRDDNRGGGFRGDRNDDRGGF-KRDDNRGGGFRGDRNDDRGGF- 373
Query: 183 LRNCNTGG--LGLRNCNTGGL 201
R+ N GG G RN + GG
Sbjct: 374 KRDDNRGGGFRGDRNDDRGGF 394
>gi|229595232|ref|XP_001018904.3| RE04347p, putative [Tetrahymena thermophila]
gi|225566318|gb|EAR98659.3| RE04347p, putative [Tetrahymena thermophila SB210]
Length = 603
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 12 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT- 68
G+ N GG ++N N GG G++N N GG G++N N G +N N GG +N N
Sbjct: 391 GINTMNQGGYSMQNNGMNQGGYGMQNMNQGGYGMQNTNQ--YGQQNMNQGGFAQQNMNQA 448
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
GG G +N N G +N N G G +N N GG G++N
Sbjct: 449 GGYGQQNLNQVGFAQQNMNQVGYGQQNINQGGYGMQN 485
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 42 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT- 98
G+ N GG ++N N GG G++N N GG G++N N G +N N GG +N N
Sbjct: 391 GINTMNQGGYSMQNNGMNQGGYGMQNMNQGGYGMQNTNQ--YGQQNMNQGGFAQQNMNQA 448
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
GG G +N N G +N N G G +N N GG G++N
Sbjct: 449 GGYGQQNLNQVGFAQQNMNQVGYGQQNINQGGYGMQN 485
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 82 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT- 138
G+ N GG ++N N GG G++N N GG G++N N G +N N GG +N N
Sbjct: 391 GINTMNQGGYSMQNNGMNQGGYGMQNMNQGGYGMQNTNQ--YGQQNMNQGGFAQQNMNQA 448
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
GG G +N N G +N N G G +N N GG G++N
Sbjct: 449 GGYGQQNLNQVGFAQQNMNQVGYGQQNINQGGYGMQN 485
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 122 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT- 178
G+ N GG ++N N GG G++N N GG G++N N G +N N GG +N N
Sbjct: 391 GINTMNQGGYSMQNNGMNQGGYGMQNMNQGGYGMQNTNQ--YGQQNMNQGGFAQQNMNQA 448
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
GG G +N N G +N N G G +N N GG G++N
Sbjct: 449 GGYGQQNLNQVGFAQQNMNQVGYGQQNINQGGYGMQN 485
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 152 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT- 208
G+ N GG ++N N GG G++N N GG G++N N G +N N GG +N N
Sbjct: 391 GINTMNQGGYSMQNNGMNQGGYGMQNMNQGGYGMQNTNQ--YGQQNMNQGGFAQQNMNQA 448
Query: 209 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
GG G +N N G +N N G G +N N GG
Sbjct: 449 GGYGQQNLNQVGFAQQNMNQVGYGQQNINQGGY 481
>gi|428298482|ref|YP_007136788.1| pentapeptide repeat-containing protein [Calothrix sp. PCC 6303]
gi|428235026|gb|AFZ00816.1| pentapeptide repeat protein [Calothrix sp. PCC 6303]
Length = 567
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 91/251 (36%), Gaps = 20/251 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A +S K L+ + L N N LRN + L + + N LRN
Sbjct: 55 ADLSRKNLKRAD-----LYNANLQRSDLRNTDLSDAKLNSADLSRADFYQAN-----LRN 104
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ G L + N LRN N L N + GL L G+ N G L
Sbjct: 105 TDFSGANLNSANFRNADLRNANFSNADLANADFSGLDL-----YGVNFSNAKMRGTRLDR 159
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+ L + G+ LRN N G+ L N L + G LRN N LRN
Sbjct: 160 VNLSGVNLSGADLSGIDLRNVNLRGINLTRINLSHANLIGFDFRGTDLRNANLSYADLRN 219
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
+ L N LRN N G+ RN + G+ L + LR N +P
Sbjct: 220 SD-----LSNAKLESADLRNANLSGVNFRNADLIGVNLDGASLQNADLRGANLNFTSLPS 274
Query: 246 SKRGAQENASR 256
E+ +R
Sbjct: 275 GIVAEAEDYTR 285
>gi|298526831|ref|ZP_07014240.1| hypothetical protein TBAG_03710 [Mycobacterium tuberculosis
94_M4241A]
gi|298496625|gb|EFI31919.1| hypothetical protein TBAG_03710 [Mycobacterium tuberculosis
94_M4241A]
Length = 1684
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 110/263 (41%), Gaps = 20/263 (7%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N +G GL N G +GL N TG G+GL G+G N TG LGL N T
Sbjct: 1 MGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGT 60
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 135
G +G N TG GL N + G+ N T GL N GL N NTG L + +
Sbjct: 61 GNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGS 120
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR- 194
NTGG+ NTG + NTG N NTG + N G L + + G +G
Sbjct: 121 FNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSF 179
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA 250
+ + G L + N N G + + + G+ L + + G +P+ A
Sbjct: 180 SIDIAGSTLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPA 233
Query: 251 ---QENASRSENEPCLVKIKFTP 270
+ + S + LV P
Sbjct: 234 IPLEIHESIHMDPIVLVPATTIP 256
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1115 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1174
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1175 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1234
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1235 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1294
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 1295 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1338
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1115 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1174
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1175 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1234
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1235 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1294
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 1295 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 1337
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 524 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 583
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 584 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 638
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 639 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 698
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 699 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 738
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 528 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 587
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 588 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 642
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 643 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 702
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 703 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 738
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 106/265 (40%), Gaps = 31/265 (11%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNT 58
GL N +G GL N G +GL N TG +G+ N TG LGL N T
Sbjct: 1 MGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGT 60
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 115
G +G N TG GL N + G+ N T GL N GL N NTG L + +
Sbjct: 61 GNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGS 120
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR- 174
NTGG+ NTG + NTG N NTG + N G L + + G +G
Sbjct: 121 FNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSF 179
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGG 230
+ + G L + N N G + + + G+ L + + G + +
Sbjct: 180 SIDIAGSTLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPA 233
Query: 231 LGLRNCNTGGL----IVPKSKRGAQ 251
+ L + + +VP + AQ
Sbjct: 234 IPLEIHESIHMDPIVLVPATTIPAQ 258
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 493 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 549
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 550 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 609
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 610 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 664
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 665 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 724
Query: 236 CNTGGL 241
NTG
Sbjct: 725 INTGWF 730
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 464 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 523
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 524 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 583
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 584 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 638
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 639 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 692
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 1050 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 1109
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1110 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 1169
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 1170 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 1229
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 1230 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 1279
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 463 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 522
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 523 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 582
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 583 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 637
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 638 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 672
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 463 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 522
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 523 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 582
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 583 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 637
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 638 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 665
>gi|260837288|ref|XP_002613637.1| hypothetical protein BRAFLDRAFT_226947 [Branchiostoma floridae]
gi|229299023|gb|EEN69646.1| hypothetical protein BRAFLDRAFT_226947 [Branchiostoma floridae]
Length = 142
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 51/134 (38%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+R C G+R C G+ C +R C +R C G+R C G
Sbjct: 8 IRTCCCYSCGIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCG 67
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+R C G+R C G+R C +R C G+R C G+R C G
Sbjct: 68 IRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKSCGIRICCWKSCG 127
Query: 133 LRNCNTGGLGLRNC 146
+R C G+R C
Sbjct: 128 IRICCWNSCGIRIC 141
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 51/134 (38%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
+R C G+R C G+ C +R C +R C G+R C G
Sbjct: 8 IRTCCCYSCGIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCG 67
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
+R C G+R C G+R C +R C G+R C G+R C G
Sbjct: 68 IRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKSCGIRICCWKSCG 127
Query: 143 LRNCNTGGLGLRNC 156
+R C G+R C
Sbjct: 128 IRICCWNSCGIRIC 141
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 51/134 (38%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+R C G+R C G+ C +R C +R C G+R C G
Sbjct: 8 IRTCCCYSCGIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCG 67
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
+R C G+R C G+R C +R C G+R C G+R C G
Sbjct: 68 IRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKSCGIRICCWKSCG 127
Query: 153 LRNCNTGGLGLRNC 166
+R C G+R C
Sbjct: 128 IRICCWNSCGIRIC 141
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 51/134 (38%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 102
+R C G+R C G+ C +R C +R C G+R C G
Sbjct: 8 IRTCCCYSCGIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCG 67
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
+R C G+R C G+R C +R C G+R C G+R C G
Sbjct: 68 IRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKSCGIRICCWKSCG 127
Query: 163 LRNCNTGGLGLRNC 176
+R C G+R C
Sbjct: 128 IRICCWNSCGIRIC 141
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 51/134 (38%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
+R C G+R C G+ C +R C +R C G+R C G
Sbjct: 8 IRTCCCYSCGIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCG 67
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
+R C G+R C G+R C +R C G+R C G+R C G
Sbjct: 68 IRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKSCGIRICCWKSCG 127
Query: 173 LRNCNTGGLGLRNC 186
+R C G+R C
Sbjct: 128 IRICCWNSCGIRIC 141
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 51/134 (38%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
+R C G+R C G+ C +R C +R C G+R C G
Sbjct: 8 IRTCCCYSCGIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCG 67
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
+R C G+R C G+R C +R C G+R C G+R C G
Sbjct: 68 IRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKSCGIRICCWKSCG 127
Query: 183 LRNCNTGGLGLRNC 196
+R C G+R C
Sbjct: 128 IRICCWNSCGIRIC 141
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 51/134 (38%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+R C G+R C G+ C +R C +R C G+R C G
Sbjct: 8 IRTCCCYSCGIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCG 67
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+R C G+R C G+R C +R C G+R C G+R C G
Sbjct: 68 IRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKSCGIRICCWKSCG 127
Query: 193 LRNCNTGGLGLRNC 206
+R C G+R C
Sbjct: 128 IRICCWNSCGIRIC 141
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 51/134 (38%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
+R C G+R C G+ C +R C +R C G+R C G
Sbjct: 8 IRTCCCYSCGIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCG 67
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 202
+R C G+R C G+R C +R C G+R C G+R C G
Sbjct: 68 IRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKSCGIRICCWKSCG 127
Query: 203 LRNCNTGGLGLRNC 216
+R C G+R C
Sbjct: 128 IRICCWNSCGIRIC 141
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 51/134 (38%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
+R C G+R C G+ C +R C +R C G+R C G
Sbjct: 8 IRTCCCYSCGIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCG 67
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
+R C G+R C G+R C +R C G+R C G+R C G
Sbjct: 68 IRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKSCGIRICCWKSCG 127
Query: 213 LRNCNTGGLGLRNC 226
+R C G+R C
Sbjct: 128 IRICCWNSCGIRIC 141
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 51/134 (38%)
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
+R C G+R C G+ C +R C +R C G+R C G
Sbjct: 8 IRTCCCYSCGIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCG 67
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
+R C G+R C G+R C +R C G+R C G+R C G
Sbjct: 68 IRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKSCGIRICCWKSCG 127
Query: 223 LRNCNTGGLGLRNC 236
+R C G+R C
Sbjct: 128 IRICCWNSCGIRIC 141
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 48/125 (38%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G+R C G+ C +R C +R C G+R C G+R C
Sbjct: 17 GIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCGIRICCWKSY 76
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G+R C G+R C +R C G+R C G+R C G+R C
Sbjct: 77 GIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKSCGIRICCWKSCGIRICCWNSC 136
Query: 132 GLRNC 136
G+R C
Sbjct: 137 GIRIC 141
>gi|433636452|ref|YP_007270079.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
gi|432168045|emb|CCK65569.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
Length = 3139
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 98/227 (43%), Gaps = 10/227 (4%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
+GL + G +GL N LG N LG N G +G N LG N
Sbjct: 2572 IGLADVGNGNVGLGNVGNLNLGAANIGDLNLGFGNIGGGNVGFGNIGNSNLGFANS---- 2627
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNT 138
GLR G +GL N + +GL N G +GL N N G+GL N G G N
Sbjct: 2628 -GLRALGVGNIGLGNAGSNNVGLANMGAGNIGLANTGTNNVGIGLTGDNLSGFGGLNSGA 2686
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 195
G +GL N TG +G N TG GL N + G+ N T GL N NTG +
Sbjct: 2687 GNIGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNAGTASTGLFNAGDFNTGVANAGS 2746
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG N NTG L + NTG L + NTG N NTG I
Sbjct: 2747 YNTGSFNAGNTNTGDLNPGSINTGWLNTGHSNTGIANAGNVNTGAFI 2793
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 100/235 (42%), Gaps = 10/235 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL + G +GL N LG N LG N G +G N LG N
Sbjct: 2573 GLADVGNGNVGLGNVGNLNLGAANIGDLNLGFGNIGGGNVGFGNIGNSNLGFANS----- 2627
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTG 129
GLR G +GL N + +GL N G +GL N N G+GL N G G N G
Sbjct: 2628 GLRALGVGNIGLGNAGSNNVGLANMGAGNIGLANTGTNNVGIGLTGDNLSGFGGLNSGAG 2687
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNC 186
+GL N TG +G N TG GL N + G+ N T GL N NTG +
Sbjct: 2688 NIGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNAGTASTGLFNAGDFNTGVANAGSY 2747
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG N NTG L + NTG L + NTG N NTG N N G L
Sbjct: 2748 NTGSFNAGNTNTGDLNPGSINTGWLNTGHSNTGIANAGNVNTGAFITGNDNNGML 2802
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNT 128
+G N G LG+ N +G N + +GL N G +GL N N G+GL N
Sbjct: 2029 VGFANSGLGALGVGN-----IGFGNAGSNNIGLANLGVGNIGLANTGTNNVGIGLTGDNL 2083
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 186
G+G N G LGL N TG +G N TG GL N + G+ N T GL N
Sbjct: 2084 SGIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNWGLFNSGSYNTGIGNAGTASTGLFNAGD 2143
Query: 187 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTG N NTG + + NTG L + NTG N +TG +
Sbjct: 2144 FNTGVANVGSHNTGSFNPGNTNTGDVNPGHTNTGWLNTGHANTGLANSGNVDTGAFM 2200
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 80/176 (45%), Gaps = 10/176 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNT 118
+G N G LG+ N +G N + +GL N G +GL N N G+GL N
Sbjct: 2029 VGFANSGLGALGVGN-----IGFGNAGSNNIGLANLGVGNIGLANTGTNNVGIGLTGDNL 2083
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 176
G+G N G LGL N TG +G N TG GL N + G+ N T GL N
Sbjct: 2084 SGIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNWGLFNSGSYNTGIGNAGTASTGLFNAGD 2143
Query: 177 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTG N NTG + + NTG L + NTG N +TG
Sbjct: 2144 FNTGVANVGSHNTGSFNPGNTNTGDVNPGHTNTGWLNTGHANTGLANSGNVDTGAF 2199
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 75/176 (42%), Gaps = 15/176 (8%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNT 68
GLR G +GL N + +GL N G +GL N N G+GL N G G N
Sbjct: 2627 SGLRALGVGNIGLGNAGSNNVGLANMGAGNIGLANTGTNNVGIGLTGDNLSGFGGLNSGA 2686
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------ 116
G +GL N TG +G N TG GL N + G+ N T GL N
Sbjct: 2687 GNIGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNAGTASTGLFNAGDFNTGVANAGS 2746
Query: 117 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG L + NTG L + NTG N NTG N N G L
Sbjct: 2747 YNTGSFNAGNTNTGDLNPGSINTGWLNTGHSNTGIANAGNVNTGAFITGNDNNGML 2802
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 70/160 (43%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G+ N G +GL N N G+GL N G+G N G +GL N
Sbjct: 836 VGNVGLGNAGVNNVGVANLGVGNVGLANTGNNNFGIGLTGDNLSGVGGLNSGAGNIGLFN 895
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +G N TG GL N G+ N T GL N NTG + N+G
Sbjct: 896 SGTGNVGFFNTGTGNWGLFNSGVYNTGVGNSGTASTGLFNAGGFNTGVANTGSYNSGSFN 955
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTGG+ + NTG NTG NTG I
Sbjct: 956 AGDTNTGGVNPGSVNTGWFNTGYANTGVFNSGTVNTGAFI 995
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +GL N T LG N G +G N N G+GL N G+G N G +GL N
Sbjct: 257 GNVGLGNAGTNNLGFANTGVGNIGFANSGNNNFGIGLTGNNQAGIGGLNSGAGNIGLFNS 316
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N G GL N + G+ N T G N NTG + NTG
Sbjct: 317 GTGNVGFFNTGIGNFGLFNSGSYNTGIGNAGTASTGFFNVGNFNTGVANTGSYNTGSFNA 376
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG + NTG + NTG + NTG I
Sbjct: 377 GSTNTGDFNPGSVNTGWFNTGSINTGLANSGHVNTGAFI 415
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 72/170 (42%), Gaps = 5/170 (2%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +GL N T LG N G +G N N G+GL N G+G N G +GL N
Sbjct: 257 GNVGLGNAGTNNLGFANTGVGNIGFANSGNNNFGIGLTGNNQAGIGGLNSGAGNIGLFNS 316
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 193
TG +G N G GL N + G+ N T G N NTG + NTG
Sbjct: 317 GTGNVGFFNTGIGNFGLFNSGSYNTGIGNAGTASTGFFNVGNFNTGVANTGSYNTGSFNA 376
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG + NTG + NTG N + G L V
Sbjct: 377 GSTNTGDFNPGSVNTGWFNTGSINTGLANSGHVNTGAFISGNFSNGALWV 426
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 72/170 (42%), Gaps = 5/170 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +GL N T LG N G +G N N G+GL N G+G N G +GL N
Sbjct: 257 GNVGLGNAGTNNLGFANTGVGNIGFANSGNNNFGIGLTGNNQAGIGGLNSGAGNIGLFNS 316
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---NCNTGGLGLRNCNTGGLGL 133
TG +G N G GL N + G+ N T G N NTG + NTG
Sbjct: 317 GTGNVGFFNTGIGNFGLFNSGSYNTGIGNAGTASTGFFNVGNFNTGVANTGSYNTGSFNA 376
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ NTG + NTG + NTG + NTG N + G L +
Sbjct: 377 GSTNTGDFNPGSVNTGWFNTGSINTGLANSGHVNTGAFISGNFSNGALWV 426
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 102/258 (39%), Gaps = 18/258 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+G N T +GL N G +G N N G+GL N G+G N G LGL N T
Sbjct: 1451 IGFGNAGTNNVGLANMGLGNIGFANTGNNNVGVGLTGDNLSGIGGLNSGAGNLGLFNSGT 1510
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G+ N TG GL N G+ N TG G N NTG + NTG N
Sbjct: 1511 GNIGIFNTGTGNWGLFNSGDYNTGIGNGGTGSTGFFNAGGFNTGVANAGSYNTGSFNAGN 1570
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-R 194
NTGG+ + NTG + NTG N NTG + N G L + + G G
Sbjct: 1571 TNTGGVNPGSINTGWFNAGHTNTGTFNTGNVNTGAFNSGSLNNGALWTGDYH-GLFGFSY 1629
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN----CNTGGLIVPKSKRGA 250
+ G + + N N G + + G+ L + N G +P+
Sbjct: 1630 SIEISGSTVLDFN------ETFNFGPVTIEPITIPGMSLFDVHQIVNIGPFHIPQIDVPP 1683
Query: 251 QE-NASRSENEPCLVKIK 267
+ S P LV +
Sbjct: 1684 IPLDIHESMEIPPLVFLP 1701
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 76/178 (42%), Gaps = 8/178 (4%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNC 86
G +GL N GL G +GL N +G+ N G +GL N N G+GL
Sbjct: 820 GNVGLGNA---GLAAGVAGVGNVGLGNAGVNNVGVANLGVGNVGLANTGNNNFGIGLTGD 876
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
N G+G N G +GL N TG +G N TG GL N G+ N T GL N
Sbjct: 877 NLSGVGGLNSGAGNIGLFNSGTGNVGFFNTGTGNWGLFNSGVYNTGVGNSGTASTGLFNA 936
Query: 147 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTG + N+G + NTGG+ + NTG NTG NTG
Sbjct: 937 GGFNTGVANTGSYNSGSFNAGDTNTGGVNPGSVNTGWFNTGYANTGVFNSGTVNTGAF 994
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 70/167 (41%), Gaps = 5/167 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N T LG N G +G N N G+GL N G+G N G +GL N TG
Sbjct: 260 GLGNAGTNNLGFANTGVGNIGFANSGNNNFGIGLTGNNQAGIGGLNSGAGNIGLFNSGTG 319
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---NCNTGGLGLRNCNTGGLGLRNC 126
+G N G GL N + G+ N T G N NTG + NTG +
Sbjct: 320 NVGFFNTGIGNFGLFNSGSYNTGIGNAGTASTGFFNVGNFNTGVANTGSYNTGSFNAGST 379
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
NTG + NTG + NTG + NTG N + G L +
Sbjct: 380 NTGDFNPGSVNTGWFNTGSINTGLANSGHVNTGAFISGNFSNGALWV 426
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLG 62
VA + GL N +G+ N G +GL N N G+GL N G+G N G +G
Sbjct: 833 VAGVGNVGLGNAGVNNVGVANLGVGNVGLANTGNNNFGIGLTGDNLSGVGGLNSGAGNIG 892
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 119
L N TG +G N TG GL N G+ N T GL N NTG + N+G
Sbjct: 893 LFNSGTGNVGFFNTGTGNWGLFNSGVYNTGVGNSGTASTGLFNAGGFNTGVANTGSYNSG 952
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTGG+ + NTG NTG NTG
Sbjct: 953 SFNAGDTNTGGVNPGSVNTGWFNTGYANTGVFNSGTVNTGAF 994
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 90/213 (42%), Gaps = 22/213 (10%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG------------LGLRNCNTGGLGLRNCNTGGLGL 63
N G L N G + L N GG +G N G LG+ N +G
Sbjct: 1992 ANVGNFNLGAANLGDVNLGFGNLGGGNVGFGNIGNSNVGFANSGLGALGVGN-----IGF 2046
Query: 64 RNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
N + +GL N G +GL N N G+GL N G+G N G LGL N TG +
Sbjct: 2047 GNAGSNNIGLANLGVGNIGLANTGTNNVGIGLTGDNLSGIGGLNSGAGNLGLFNSGTGNV 2106
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 178
G N TG GL N + G+ N T GL N NTG + + NTG N NT
Sbjct: 2107 GFFNSGTGNWGLFNSGSYNTGIGNAGTASTGLFNAGDFNTGVANVGSHNTGSFNPGNTNT 2166
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
G + + NTG L + NTG N +TG
Sbjct: 2167 GDVNPGHTNTGWLNTGHANTGLANSGNVDTGAF 2199
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 99/267 (37%), Gaps = 37/267 (13%)
Query: 7 PISTKGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNTGG 60
P + G N GG+ GL N G G N + G+ N T G+ N +G
Sbjct: 1875 PTPSSGFFNSGAGGVSGLGNFGAGMSGWWNQAHAAVAGAGSGVLNAGTLSSGVLNVGSGV 1934
Query: 61 LGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
GL N +T GLG +G G L G L LGL + +GL N
Sbjct: 1935 SGLYNTSTLGLGTPALVSGAGNVGQQLSGLLAAGTALNQSPIINLGLADVGNYNIGLANV 1994
Query: 117 NTGGLGLRNC--------------------NTGGLGLRNCNTGGLGLRNCNTGG-----L 151
LG N +G N G LG+ N G +
Sbjct: 1995 GNFNLGAANLGDVNLGFGNLGGGNVGFGNIGNSNVGFANSGLGALGVGNIGFGNAGSNNI 2054
Query: 152 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
GL N G +GL N N G+GL N G+G N G LGL N TG +G N TG
Sbjct: 2055 GLANLGVGNIGLANTGTNNVGIGLTGDNLSGIGGLNSGAGNLGLFNSGTGNVGFFNSGTG 2114
Query: 210 GLGLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N + G+ N T GL N
Sbjct: 2115 NWGLFNSGSYNTGIGNAGTASTGLFNA 2141
>gi|156385486|ref|XP_001633661.1| predicted protein [Nematostella vectensis]
gi|156220734|gb|EDO41598.1| predicted protein [Nematostella vectensis]
Length = 101
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 102
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 160
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 220
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 202
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 46/92 (50%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S+ LR C G LR C+ G LR C T G LR C T G LR C T G LR C T
Sbjct: 8 SSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTT 67
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
G LR C T G LR C T G LR C T G
Sbjct: 68 SGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
>gi|440582839|emb|CCG13242.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 3157
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 118/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1981 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 2040
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2041 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2095
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N + G
Sbjct: 2096 GLNSGAGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTG 2155
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2156 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2215
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2216 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2245
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 395 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 449
Query: 247 KRGAQEN 253
G + N
Sbjct: 450 PIGLELN 456
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 99/240 (41%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2575 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2634
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2635 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2691
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2692 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2751
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG + N NTG LI
Sbjct: 2752 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVVNAGNVNTGALI 2811
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1430 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1488
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1489 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1546
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1547 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1606
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1607 NVNTGAFNSGSFNNGAL 1623
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 100/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1932 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1991
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1992 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 2051
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 2052 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2111
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N + GL N NTG + +
Sbjct: 2112 GNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSFNVGD 2171
Query: 236 CNTGGL 241
NTGG
Sbjct: 2172 TNTGGF 2177
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1922 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1981
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1982 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 2041
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2042 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2096
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2097 LNSGAGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 2149
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 199 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 255
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 256 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 314
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 315 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 999
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 998
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 998
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 998
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1866 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1924
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1925 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1984
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1985 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 2044
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 2045 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2104
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2105 GLFNSGTGNIGFFNTGTGNWGLFNS 2129
>gi|379029706|dbj|BAL67439.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 3145
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 118/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1969 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 2028
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2029 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2083
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N + G
Sbjct: 2084 GLNSGAGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTG 2143
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2144 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2203
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2204 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2233
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 207 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 262
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 382
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 383 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 437
Query: 247 KRGAQEN 253
G + N
Sbjct: 438 PIGLELN 444
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 99/240 (41%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2563 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2622
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2623 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2679
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2680 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2739
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG + N NTG LI
Sbjct: 2740 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVVNAGNVNTGALI 2799
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1418 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1476
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1477 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1534
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1535 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1594
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1595 NVNTGAFNSGSFNNGAL 1611
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 100/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1920 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1979
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1980 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 2039
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 2040 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2099
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N + GL N NTG + +
Sbjct: 2100 GNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSFNVGD 2159
Query: 236 CNTGGL 241
NTGG
Sbjct: 2160 TNTGGF 2165
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1910 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1969
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1970 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 2029
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2030 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2084
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2085 LNSGAGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 2137
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 987
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1854 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1912
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1913 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1972
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1973 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 2032
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 2033 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2092
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2093 GLFNSGTGNIGFFNTGTGNWGLFNS 2117
>gi|156388147|ref|XP_001634563.1| predicted protein [Nematostella vectensis]
gi|156221647|gb|EDO42500.1| predicted protein [Nematostella vectensis]
Length = 125
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 45/122 (36%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
NC T G N T G NC T G NC T G NC G NC T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
NC T G NC T G NC T G NC T G NC G NC
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKN 120
Query: 135 NC 136
NC
Sbjct: 121 NC 122
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 45/122 (36%)
Query: 25 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 84
NC T G N T G NC T G NC T G NC G NC T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 85 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 144
NC T G NC T G NC T G NC T G NC G NC
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKN 120
Query: 145 NC 146
NC
Sbjct: 121 NC 122
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 45/122 (36%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 94
NC T G N T G NC T G NC T G NC G NC T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 95 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 154
NC T G NC T G NC T G NC T G NC G NC
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKN 120
Query: 155 NC 156
NC
Sbjct: 121 NC 122
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 45/122 (36%)
Query: 45 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 104
NC T G N T G NC T G NC T G NC G NC T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 105 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
NC T G NC T G NC T G NC T G NC G NC
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKN 120
Query: 165 NC 166
NC
Sbjct: 121 NC 122
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 45/122 (36%)
Query: 55 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 114
NC T G N T G NC T G NC T G NC G NC T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
NC T G NC T G NC T G NC T G NC G NC
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKN 120
Query: 175 NC 176
NC
Sbjct: 121 NC 122
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 45/122 (36%)
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
NC T G N T G NC T G NC T G NC G NC T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
NC T G NC T G NC T G NC T G NC G NC
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKN 120
Query: 185 NC 186
NC
Sbjct: 121 NC 122
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 45/122 (36%)
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
NC T G N T G NC T G NC T G NC G NC T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
NC T G NC T G NC T G NC T G NC G NC
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKN 120
Query: 195 NC 196
NC
Sbjct: 121 NC 122
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 45/122 (36%)
Query: 85 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 144
NC T G N T G NC T G NC T G NC G NC T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 145 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 204
NC T G NC T G NC T G NC T G NC G NC
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKN 120
Query: 205 NC 206
NC
Sbjct: 121 NC 122
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 45/122 (36%)
Query: 95 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 154
NC T G N T G NC T G NC T G NC G NC T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 155 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
NC T G NC T G NC T G NC T G NC G NC
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKN 120
Query: 215 NC 216
NC
Sbjct: 121 NC 122
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 45/122 (36%)
Query: 105 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
NC T G N T G NC T G NC T G NC G NC T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 165 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
NC T G NC T G NC T G NC T G NC G NC
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKN 120
Query: 225 NC 226
NC
Sbjct: 121 NC 122
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 45/122 (36%)
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
NC T G N T G NC T G NC T G NC G NC T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
NC T G NC T G NC T G NC T G NC G NC
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKN 120
Query: 235 NC 236
NC
Sbjct: 121 NC 122
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 42/118 (35%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
G N T G NC T G NC T G NC G NC T G NC T
Sbjct: 5 HKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWNNCCT 64
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G NC T G NC T G NC T G NC G NC NC
Sbjct: 65 HKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKNNC 122
>gi|449065463|ref|YP_007432546.1| PPE family protein [third part] [Mycobacterium bovis BCG str. Korea
1168P]
gi|449033971|gb|AGE69398.1| PPE family protein [third part] [Mycobacterium bovis BCG str. Korea
1168P]
Length = 1219
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 650 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 709
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 710 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 769
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 770 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 829
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 830 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 873
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 650 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 709
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 710 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 769
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 770 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 829
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 830 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 872
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 59 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 118
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 119 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 173
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 174 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 233
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 234 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 273
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 63 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 122
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 123 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 177
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 178 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 237
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 238 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 273
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 28 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 84
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 85 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 144
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 145 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 199
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 200 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 259
Query: 236 CNTGGL 241
NTG
Sbjct: 260 INTGWF 265
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 95/232 (40%), Gaps = 13/232 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNT 68
+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 1 MLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQIPI 60
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 61 LNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGL 120
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 121 TAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGL 175
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 176 NSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 227
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 585 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 644
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 645 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 704
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 705 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 764
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 765 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 814
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 83/205 (40%), Gaps = 13/205 (6%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNT 98
+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 1 MLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQIPI 60
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 156
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 61 LNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGL 120
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 214
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 121 TAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGL 175
Query: 215 NCNTGGLGLRNCNTGGLGLRNCNTG 239
N G +GL N TG +G N TG
Sbjct: 176 NSGAGNIGLFNSGTGNIGFFNSGTG 200
>gi|306809355|ref|ZP_07446023.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu007]
gi|308344350|gb|EFP33201.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
Length = 3688
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3119 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3178
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3179 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3238
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3239 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3298
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3299 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3342
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3119 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3178
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3179 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3238
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3239 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3298
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3299 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3341
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2012 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2071
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2072 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2131
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2132 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2190
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2191 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2244
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2245 SIHMDPIVLVPATTIP 2260
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1932 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1991
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1992 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2051
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2052 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2111
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2112 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2170
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1932 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1991
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1992 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2051
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2052 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2111
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2112 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2170
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2528 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2587
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2588 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2642
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2643 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2702
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2703 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2742
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1334 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1393
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1394 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1450
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1451 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1510
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1511 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1549
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 732 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 791
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 792 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 846
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 847 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 906
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 907 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 962
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2532 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2591
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2592 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2646
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2647 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2706
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2707 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2742
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2014 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2073
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2074 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2133
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2134 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2192
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2193 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2246
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2247 HMDPIVLVPATTIPAQ 2262
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1336 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1390
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1391 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1447
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1448 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1507
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1508 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1541
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2497 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2553
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2554 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2613
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2614 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2668
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2669 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2728
Query: 236 CNTGGL 241
NTG
Sbjct: 2729 INTGWF 2734
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 717 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 773
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 774 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 829
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 830 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 888
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 889 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 948
Query: 236 CNTGGL 241
NTG
Sbjct: 949 INTGWF 954
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1404 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1463
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1464 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1523
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1524 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1582
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1583 IPQFPIRITTTGGIG 1597
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1407 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1466
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1467 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1526
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1527 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1585
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1586 FPIRITTTGGIG 1597
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2468 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2527
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2528 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2587
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2588 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2642
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2643 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2696
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 775 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 834
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 835 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 894
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 895 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 954
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 955 NTGHANT---GLANAGTFGTG 972
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 237 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 296
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 297 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 356
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 357 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 404
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 237 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 296
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 297 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 356
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 357 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 408
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 237 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 296
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 297 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 356
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 357 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 408
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 627 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 685
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 686 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 745
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 746 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 805
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 806 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 865
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 866 SGIGNIGLFNSGTGNVGFFNSGTG 889
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 169 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 228
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 229 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 288
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 289 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 348
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 349 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 393
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 238 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 297
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 298 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 357
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 358 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 408
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3054 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3113
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3114 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3173
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3174 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3233
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3234 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3283
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2467 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2526
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2527 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2586
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2587 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2641
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2642 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2676
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2467 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2526
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2527 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2586
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2587 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2641
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2642 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2669
>gi|308373719|ref|ZP_07433433.2| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308336607|gb|EFP25458.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
Length = 3661
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3092 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3151
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3152 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3211
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3212 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3271
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3272 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3315
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3092 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3151
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3152 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3211
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3212 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3271
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3272 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3314
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1985 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2044
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2045 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2104
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2105 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2163
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2164 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2217
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2218 SIHMDPIVLVPATTIP 2233
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1905 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1964
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1965 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2024
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2025 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2084
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2085 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2143
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1905 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1964
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1965 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2024
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2025 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2084
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2085 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2143
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2501 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2560
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2561 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2615
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2616 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2675
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2676 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2715
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1307 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1366
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1367 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1423
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1424 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1483
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1484 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1522
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 705 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 764
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 765 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 819
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 820 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 879
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 880 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 935
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2505 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2564
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2565 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2619
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2620 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2679
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2680 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2715
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1987 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2046
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2047 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2106
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2107 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2165
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2166 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2219
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2220 HMDPIVLVPATTIPAQ 2235
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1309 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1363
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1364 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1420
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1421 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1480
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1481 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1514
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2470 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2526
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2527 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2586
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2587 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2641
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2642 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2701
Query: 236 CNTGGL 241
NTG
Sbjct: 2702 INTGWF 2707
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 690 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 746
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 747 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 802
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 803 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 861
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 862 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 921
Query: 236 CNTGGL 241
NTG
Sbjct: 922 INTGWF 927
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1377 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1436
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1437 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1496
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1497 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1555
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1556 IPQFPIRITTTGGIG 1570
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1380 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1439
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1440 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1499
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1500 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1558
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1559 FPIRITTTGGIG 1570
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2441 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2500
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2501 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2560
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2561 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2615
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2616 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2669
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 748 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 807
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 808 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 867
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 868 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 927
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 928 NTGHANT---GLANAGTFGTG 945
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 210 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 269
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 270 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 329
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 330 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 377
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 210 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 269
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 270 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 329
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 330 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 381
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 210 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 269
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 270 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 329
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 330 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 381
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 600 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 658
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 659 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 718
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 719 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 778
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 779 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 838
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 839 SGIGNIGLFNSGTGNVGFFNSGTG 862
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 142 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 201
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 202 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 261
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 262 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 321
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 322 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 366
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 211 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 270
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 271 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 330
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 331 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 381
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3027 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3086
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3087 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3146
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3147 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3206
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3207 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3256
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2440 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2499
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2500 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2559
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2560 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2614
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2615 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2649
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2440 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2499
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2500 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2559
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2560 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2614
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2615 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2642
>gi|308370235|ref|ZP_07420752.2| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308324925|gb|EFP13776.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 3623
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3054 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3113
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3114 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3173
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3174 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3233
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3234 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3277
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3054 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3113
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3114 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3173
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3174 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3233
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3234 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3276
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1947 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2006
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2007 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2066
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2067 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2125
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2126 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2179
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2180 SIHMDPIVLVPATTIP 2195
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1867 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1926
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1927 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1986
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1987 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2046
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2047 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2105
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1867 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1926
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1927 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1986
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1987 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2046
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2047 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2105
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2463 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2522
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2523 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2577
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2578 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2637
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2638 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2677
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1269 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1328
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1329 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1385
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1386 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1445
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1446 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1484
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 667 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 726
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 727 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 781
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 782 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 841
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 842 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 897
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2467 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2526
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2527 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2581
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2582 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2641
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2642 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2677
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1949 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2008
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2009 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2068
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2069 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2127
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2128 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2181
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2182 HMDPIVLVPATTIPAQ 2197
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1271 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1325
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1326 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1382
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1383 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1442
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1443 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1476
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2432 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2488
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2489 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2548
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2549 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2603
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2604 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2663
Query: 236 CNTGGL 241
NTG
Sbjct: 2664 INTGWF 2669
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 652 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 708
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 709 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 764
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 765 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 823
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 824 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 883
Query: 236 CNTGGL 241
NTG
Sbjct: 884 INTGWF 889
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1339 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1398
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1399 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1458
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1459 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1517
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1518 IPQFPIRITTTGGIG 1532
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1342 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1401
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1402 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1461
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1462 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1520
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1521 FPIRITTTGGIG 1532
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2403 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2462
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2463 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2522
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2523 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2577
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2578 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2631
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 710 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 769
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 770 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 829
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 830 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 889
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 890 NTGHANT---GLANAGTFGTG 907
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 172 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 231
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 232 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 291
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 292 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 339
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 172 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 231
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 232 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 291
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 292 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 343
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 172 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 231
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 232 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 291
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 292 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 343
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 562 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 620
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 621 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 680
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 681 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 740
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 741 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 800
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 801 SGIGNIGLFNSGTGNVGFFNSGTG 824
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 104 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 163
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 164 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 223
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 224 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 283
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 284 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 328
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 173 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 232
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 233 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 292
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 293 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 343
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 2989 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3048
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3049 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3108
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3109 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3168
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3169 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3218
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2402 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2461
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2462 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2521
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2522 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2576
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2577 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2611
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2402 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2461
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2462 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2521
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2522 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2576
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2577 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2604
>gi|306799322|ref|ZP_07437624.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu006]
gi|308340479|gb|EFP29330.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006]
Length = 3662
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3093 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3152
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3153 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3212
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3213 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3272
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3273 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3316
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3093 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3152
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3153 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3212
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3213 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3272
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3273 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3315
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1986 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2045
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2046 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2105
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2106 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2164
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2165 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2218
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2219 SIHMDPIVLVPATTIP 2234
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1906 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1965
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1966 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2025
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2026 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2085
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2086 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2144
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1906 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1965
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1966 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2025
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2026 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2085
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2086 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2144
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2502 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2561
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2562 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2616
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2617 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2676
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2677 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2716
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1308 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1367
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1368 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1424
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1425 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1484
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1485 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1523
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 706 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 765
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 766 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 820
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 821 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 880
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 881 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 936
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2506 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2565
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2566 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2620
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2621 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2680
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2681 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2716
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1988 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2047
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2048 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2107
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2108 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2166
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2167 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2220
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2221 HMDPIVLVPATTIPAQ 2236
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1310 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1364
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1365 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1421
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1422 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1481
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1482 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1515
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2471 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2527
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2528 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2587
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2588 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2642
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2643 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2702
Query: 236 CNTGGL 241
NTG
Sbjct: 2703 INTGWF 2708
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 691 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 747
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 748 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 803
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 804 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 862
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 863 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 922
Query: 236 CNTGGL 241
NTG
Sbjct: 923 INTGWF 928
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1378 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1437
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1438 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1497
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1498 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1556
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1557 IPQFPIRITTTGGIG 1571
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1381 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1440
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1441 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1500
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1501 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1559
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1560 FPIRITTTGGIG 1571
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2442 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2501
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2502 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2561
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2562 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2616
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2617 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2670
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 749 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 808
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 809 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 868
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 869 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 928
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 929 NTGHANT---GLANAGTFGTG 946
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 211 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 270
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 271 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 330
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 331 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 378
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 211 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 270
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 271 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 330
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 331 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 382
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 211 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 270
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 271 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 330
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 331 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 382
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 601 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 659
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 660 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 719
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 720 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 779
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 780 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 839
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 840 SGIGNIGLFNSGTGNVGFFNSGTG 863
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 143 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 202
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 203 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 262
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 263 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 322
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 323 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 367
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 212 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 271
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 272 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 331
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 332 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 382
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3028 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3087
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3088 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3147
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3148 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3207
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3208 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3257
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2441 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2500
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2501 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2560
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2561 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2615
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2616 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2650
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2441 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2500
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2501 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2560
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2561 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2615
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2616 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2643
>gi|148663212|ref|YP_001284735.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148507364|gb|ABQ75173.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 3674
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3105 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3164
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3165 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3224
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3225 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3284
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3285 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3328
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3105 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3164
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3165 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3224
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3225 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3284
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3285 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3327
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1998 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2057
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2058 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2117
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2118 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2176
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2177 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2230
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2231 SIHMDPIVLVPATTIP 2246
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1918 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1977
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1978 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2037
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2038 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2097
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2098 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2156
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1918 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1977
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1978 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2037
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2038 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2097
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2098 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2156
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2514 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2573
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2574 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2628
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2629 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2688
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2689 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2728
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1320 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1379
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1380 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1436
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1437 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1496
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1497 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1535
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 718 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 777
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 778 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 832
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 833 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 892
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 893 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 948
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2518 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2577
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2578 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2632
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2633 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2692
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2693 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2728
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2000 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2059
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2060 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2119
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2120 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2178
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2179 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2232
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2233 HMDPIVLVPATTIPAQ 2248
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1322 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1376
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1377 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1433
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1434 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1493
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1494 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1527
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2483 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2539
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2540 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2599
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2600 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2654
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2655 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2714
Query: 236 CNTGGL 241
NTG
Sbjct: 2715 INTGWF 2720
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 703 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 759
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 760 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 815
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 816 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 874
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 875 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 934
Query: 236 CNTGGL 241
NTG
Sbjct: 935 INTGWF 940
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1390 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1449
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1450 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1509
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1510 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1568
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1569 IPQFPIRITTTGGIG 1583
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1393 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1452
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1453 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1512
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1513 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1571
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1572 FPIRITTTGGIG 1583
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2454 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2513
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2514 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2573
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2574 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2628
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2629 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2682
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 761 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 820
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 821 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 880
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 881 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 940
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 941 NTGHANT---GLANAGTFGTG 958
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 223 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 282
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 283 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 342
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 343 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 390
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 223 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 282
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 283 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 342
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 343 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 394
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 223 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 282
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 283 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 342
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 343 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 394
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 613 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 671
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 672 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 731
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 732 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 791
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 792 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 851
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 852 SGIGNIGLFNSGTGNVGFFNSGTG 875
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 155 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 214
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 215 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 274
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 275 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 334
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 335 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 379
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 224 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 283
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 284 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 343
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 344 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 394
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3040 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3099
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3100 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3159
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3160 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3219
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3220 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3269
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2453 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2512
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2513 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2572
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2573 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2627
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2628 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2662
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2453 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2512
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2513 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2572
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2573 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2627
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2628 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2655
>gi|433628492|ref|YP_007262121.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
gi|432156098|emb|CCK53351.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
Length = 3733
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 94/217 (43%), Gaps = 9/217 (4%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N LG N LG N +G G N G N GLGL G
Sbjct: 208 VGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFANS---GLGLP-PGMGN 263
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+GL N + GL N G +G N N G+GL N G+G N TG LGL N T
Sbjct: 264 IGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGT 323
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 205
G +G N TG G+ N + G+ N T GL N NTG + + NTG +
Sbjct: 324 GNVGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVGNVGSYNTGSFNAGS 383
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L N NTG N NTG I
Sbjct: 384 TNTGGFNPGSVNTGWLNTGNTNTGIANSGNVNTGAFI 420
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 103/247 (41%), Gaps = 13/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFANS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNVGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG + NTGG +
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVGNVGSYNTGSFNAGSTNTGGFNPGSV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L + GL + GG +P
Sbjct: 395 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGALWRGDYE----GLWGLSAGGSTIPAI 450
Query: 247 KRGAQEN 253
G + N
Sbjct: 451 PIGLELN 457
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
+GL + LGL N LG N LGL N G +G N G +G N G
Sbjct: 2572 VGLADVGNYNLGLGNVGNLNLGAANIGDLNLGLGNVGNGNVGFGNIGHGNVGFANSGLGA 2631
Query: 81 L------GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 132
L GL N + +GL N G +G N T G+GL N G G N G LG
Sbjct: 2632 LPGIGNIGLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLG 2691
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 189
L N TG +G N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 2692 LFNSGTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNAGGFNTGLANAGSYNTG 2751
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
+ NTG + NTG N NTG N +TG L
Sbjct: 2752 SFNAGDTNTGDFNPGSINTGWFNTGNSNTGIANAGNVDTGAL 2793
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 85/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 2016 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNVGFGNTGTNNL- 2074
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 2075 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 2132
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG + N NTGG N NTG + NTG
Sbjct: 2133 TGSTGLFNAGSFNTGLANAGSYNTGSVNAGNTNTGGFNPGNVNTGWFNAGHTNTGLFNTG 2192
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 2193 NVNTGAFNSGSFNNGAL 2209
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N + GL N G +GL N T G+GL N G+G N TG +GL N T
Sbjct: 3231 IGFANAGSNNFGLANMGIGNVGLANTGTNNLGIGLTGDNQTGIGGLNSGTGNVGLFNSGT 3290
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 205
G +G N TG GL N + G+ N GL N NTG + NTG N
Sbjct: 3291 GNVGFFNTGTGNFGLFNSGSYNTGIGNSGVASTGLVNAGGFNTGIANAGHHNTGSFNAGN 3350
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG N NTG N NTG LI
Sbjct: 3351 TNTGDGNPGSINTGWFNTGNANTGVANAGNVNTGALI 3387
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
+GL + LGL N LG N LGL N G +G N G +G N G
Sbjct: 2572 VGLADVGNYNLGLGNVGNLNLGAANIGDLNLGLGNVGNGNVGFGNIGHGNVGFANSGLGA 2631
Query: 101 L-GLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 152
L G+ N G +GL N G +G N T G+GL N G G N G LG
Sbjct: 2632 LPGIGNIGLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLG 2691
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 209
L N TG +G N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 2692 LFNSGTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNAGGFNTGLANAGSYNTG 2751
Query: 210 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+ NTG + NTG N NTG
Sbjct: 2752 SFNAGDTNTGDFNPGSINTGWFNTGNSNTG 2781
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + +GL N G +G N T G+GL N G G N G LGL N TG
Sbjct: 2639 GLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNSGTG 2698
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 2699 NVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNAGGFNTGLANAGSYNTGSFNAGDT 2758
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTG + NTG N NTG N +TG L
Sbjct: 2759 NTGDFNPGSINTGWFNTGNSNTGIANAGNVDTGAL 2793
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Query: 95 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 154
N G +GL N G G N G+GL N G G N G +GL N TG +G
Sbjct: 1438 NVGFGNMGLGNIGFGNTGTNNL---GIGLTGDNQTGFGGLNSGAGNIGLFNSGTGNVGFF 1494
Query: 155 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGL 211
N TG GL N + G+ N GL N NTG + NTGG N NTG
Sbjct: 1495 NSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAGHDNTGGFNAGNTNTGAF 1554
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG + N NTG NTG I
Sbjct: 1555 NPGSINTGWFNIGNANTGIANSGTVNTGAFI 1585
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +GL N G G N G+GL N G G N G +GL N TG +G
Sbjct: 1438 NVGFGNMGLGNIGFGNTGTNNL---GIGLTGDNQTGFGGLNSGAGNIGLFNSGTGNVGFF 1494
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGL 131
N TG GL N + G+ N GL N NTG + NTGG N NTG
Sbjct: 1495 NSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAGHDNTGGFNAGNTNTGAF 1554
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG + N NTG NTG
Sbjct: 1555 NPGSINTGWFNIGNANTGIANSGTVNTGAF 1584
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
N G +GL N G G N G+GL N G G N G +GL N TG +G
Sbjct: 1438 NVGFGNMGLGNIGFGNTGTNNL---GIGLTGDNQTGFGGLNSGAGNIGLFNSGTGNVGFF 1494
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGL 181
N TG GL N + G+ N GL N NTG + NTGG N NTG
Sbjct: 1495 NSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAGHDNTGGFNAGNTNTGAF 1554
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTG + N NTG NTG
Sbjct: 1555 NPGSINTGWFNIGNANTGIANSGTVNTGAF 1584
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G N G +G N T G+GL N G G N G +GL N
Sbjct: 839 VGNIGLGNAGGNNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNIGLFN 898
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +G N TG GL N + G+ N GL N NTG + NTG
Sbjct: 899 SGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAGHDNTGSFN 958
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
N NTG + NTG + N NTG NTG
Sbjct: 959 AGNTNTGAFNPGSINTGWFNIGNANTGIANSGTVNTGAF 997
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G N G +G N T G+GL N G G N G +GL N
Sbjct: 839 VGNIGLGNAGGNNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNIGLFN 898
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +G N TG GL N + G+ N GL N NTG + NTG
Sbjct: 899 SGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAGHDNTGSFN 958
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
N NTG + NTG + N NTG NTG
Sbjct: 959 AGNTNTGAFNPGSINTGWFNIGNANTGIANSGTVNTGAF 997
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 38 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 95
G +GL N +G N G +G N T G+GL N G G N G +GL N
Sbjct: 839 VGNIGLGNAGGNNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNIGLFN 898
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 152
TG +G N TG GL N + G+ N GL N NTG + NTG
Sbjct: 899 SGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAGHDNTGSFN 958
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
N NTG + NTG + N NTG NTG
Sbjct: 959 AGNTNTGAFNPGSINTGWFNIGNANTGIANSGTVNTGAF 997
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 48 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 105
G +GL N +G N G +G N T G+GL N G G N G +GL N
Sbjct: 839 VGNIGLGNAGGNNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNIGLFN 898
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 162
TG +G N TG GL N + G+ N GL N NTG + NTG
Sbjct: 899 SGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAGHDNTGSFN 958
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N NTG + NTG + N NTG NTG
Sbjct: 959 AGNTNTGAFNPGSINTGWFNIGNANTGIANSGTVNTGAF 997
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +GL N +G N G +G N T G+GL N G G N G +GL N
Sbjct: 839 VGNIGLGNAGGNNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNIGLFN 898
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 172
TG +G N TG GL N + G+ N GL N NTG + NTG
Sbjct: 899 SGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAGHDNTGSFN 958
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
N NTG + NTG + N NTG NTG
Sbjct: 959 AGNTNTGAFNPGSINTGWFNIGNANTGIANSGTVNTGAF 997
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G N G +G N T G+GL N G G N G +GL N
Sbjct: 839 VGNIGLGNAGGNNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNIGLFN 898
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 192
TG +G N TG GL N + G+ N GL N NTG + NTG
Sbjct: 899 SGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAGHDNTGSFN 958
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + NTG + N NTG NTG
Sbjct: 959 AGNTNTGAFNPGSINTGWFNIGNANTGIANSGTVNTGAF 997
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 104/265 (39%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRN-CNTG----GLGL 53
+P I+ P T G N T G N GG+ G N G G N +T G G+
Sbjct: 2452 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHTAVLGAGSGV 2510
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGG--------- 100
N T G+ N +G GL N + GLG +G G L G
Sbjct: 2511 LNAGTLHSGVLNFGSGISGLYNTSILGLGTPALVSGLGNVGQQLSGVLASGTVLNQSLIL 2570
Query: 101 -LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
+GL + LGL N LG N LGL N G +G N G +G N G
Sbjct: 2571 NVGLADVGNYNLGLGNVGNLNLGAANIGDLNLGLGNVGNGNVGFGNIGHGNVGFANSGLG 2630
Query: 160 GL------GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
L GL N + +GL N G +G N T G+GL N G G N G L
Sbjct: 2631 ALPGIGNIGLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNL 2690
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2691 GLFNSGTGNVGFFNSGTGNWGLFNS 2715
>gi|385992591|ref|YP_005910889.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|339299784|gb|AEJ51894.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length = 3725
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3156 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3215
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3216 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3275
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3276 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3335
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3336 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3379
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3156 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3215
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3216 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3275
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3276 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3335
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3336 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3378
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2049 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2108
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2109 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2168
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2169 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2227
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2228 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2281
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2282 SIHMDPIVLVPATTIP 2297
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1969 NVGGVNLGLANAGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2028
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2029 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2088
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2089 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2148
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2149 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2207
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1969 NVGGVNLGLANAGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2028
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2029 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2088
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2089 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2148
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2149 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2207
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2565 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2624
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2625 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2679
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2680 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2739
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2740 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2779
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1371 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1430
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1431 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1487
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1488 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1547
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1548 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1586
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 769 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 828
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 829 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 883
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 884 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 943
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 944 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 999
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2569 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2628
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2629 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2683
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2684 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2743
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2744 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2779
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2051 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2110
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2111 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2170
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2171 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2229
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2230 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2283
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2284 HMDPIVLVPATTIPAQ 2299
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1373 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1427
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1428 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1484
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1485 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1544
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1545 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1578
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2534 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2590
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2591 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2650
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2651 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2705
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2706 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2765
Query: 236 CNTGGL 241
NTG
Sbjct: 2766 INTGWF 2771
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 754 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 810
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 811 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 866
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 867 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 925
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 926 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 985
Query: 236 CNTGGL 241
NTG
Sbjct: 986 INTGWF 991
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1441 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1500
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1501 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1560
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1561 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1619
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1620 IPQFPIRITTTGGIG 1634
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1444 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1503
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1504 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1563
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1564 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1622
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1623 FPIRITTTGGIG 1634
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2505 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2564
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2565 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2624
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2625 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2679
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2680 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2733
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 812 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 871
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 872 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 931
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 932 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 991
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 992 NTGHANT---GLANAGTFGTG 1009
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 441
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 445
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 445
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 664 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 722
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 723 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 782
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 783 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 842
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 843 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 902
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 903 SGIGNIGLFNSGTGNVGFFNSGTG 926
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 206 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 265
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 266 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 325
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 326 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 385
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 386 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 430
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 275 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 334
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 335 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 394
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 395 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 445
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3091 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3150
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3151 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3210
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3211 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3270
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3271 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3320
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2504 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2563
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2564 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2623
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2624 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2678
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2679 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2713
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2504 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2563
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2564 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2623
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2624 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2678
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2679 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2706
>gi|57117096|ref|YP_177964.1| PPE family protein PPE56 [Mycobacterium tuberculosis H37Rv]
gi|313660340|ref|ZP_07817220.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|386000144|ref|YP_005918443.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|397675297|ref|YP_006516832.1| hypothetical protein RVBD_3350c [Mycobacterium tuberculosis H37Rv]
gi|7478767|pir||E70969 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
gi|344221191|gb|AEN01822.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|395140202|gb|AFN51361.1| hypothetical protein RVBD_3350c [Mycobacterium tuberculosis H37Rv]
gi|444896905|emb|CCP46171.1| PPE family protein PPE56 [Mycobacterium tuberculosis H37Rv]
Length = 3716
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3147 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3206
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3207 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3266
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3267 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3326
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3327 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3370
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3147 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3206
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3207 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3266
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3267 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3326
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3327 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3369
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2040 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2099
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2100 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2159
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2160 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2218
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2219 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2272
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2273 SIHMDPIVLVPATTIP 2288
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1960 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2019
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2020 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2079
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2080 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2139
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2140 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1960 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2019
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2020 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2079
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2080 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2139
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2140 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2556 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2615
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2616 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2670
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2671 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2730
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2731 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2770
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1362 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1421
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1422 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1478
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1479 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1538
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1539 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1577
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 760 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 819
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 820 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 874
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 875 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 934
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 935 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 990
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2560 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2619
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2620 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2674
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2675 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2734
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2735 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2770
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2042 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2101
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2102 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2161
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2162 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2220
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2221 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2274
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2275 HMDPIVLVPATTIPAQ 2290
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1364 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1418
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1419 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1475
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1476 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1535
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1536 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1569
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2525 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2581
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2582 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2641
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2642 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2696
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2697 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2756
Query: 236 CNTGGL 241
NTG
Sbjct: 2757 INTGWF 2762
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 745 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 801
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 802 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 857
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 858 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 916
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 917 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 976
Query: 236 CNTGGL 241
NTG
Sbjct: 977 INTGWF 982
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1551
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1552 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1610
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1611 IPQFPIRITTTGGIG 1625
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1435 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1494
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1495 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1554
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1555 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1613
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1614 FPIRITTTGGIG 1625
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2496 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2555
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2556 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2615
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2616 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2670
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2671 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2724
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 803 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 862
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 863 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 922
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 923 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 982
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 983 NTGHANT---GLANAGTFGTG 1000
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 432
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 655 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 713
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 714 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 773
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 774 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 833
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 834 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 893
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 894 SGIGNIGLFNSGTGNVGFFNSGTG 917
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 197 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 256
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 257 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 316
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 317 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 376
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 377 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 421
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 266 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 325
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 326 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 385
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 386 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3082 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3141
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3142 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3201
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3202 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3261
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3262 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3311
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2495 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2554
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2555 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2614
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2615 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2669
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2670 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2704
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2495 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2554
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2555 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2614
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2615 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2669
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2670 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2697
>gi|297636010|ref|ZP_06953790.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length = 3716
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3147 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3206
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3207 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3266
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3267 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3326
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3327 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3370
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3147 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3206
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3207 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3266
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3267 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3326
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3327 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3369
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2040 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2099
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2100 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2159
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2160 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2218
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2219 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2272
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2273 SIHMDPIVLVPATTIP 2288
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1960 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2019
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2020 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2079
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2080 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2139
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2140 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1960 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2019
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2020 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2079
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2080 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2139
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2140 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2556 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2615
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2616 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2670
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2671 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2730
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2731 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2770
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1362 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1421
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1422 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1478
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1479 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1538
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1539 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1577
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 760 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 819
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 820 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 874
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 875 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 934
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 935 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 990
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2560 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2619
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2620 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2674
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2675 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2734
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2735 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2770
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2042 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2101
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2102 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2161
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2162 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2220
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2221 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2274
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2275 HMDPIVLVPATTIPAQ 2290
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1364 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1418
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1419 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1475
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1476 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1535
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1536 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1569
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2525 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2581
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2582 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2641
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2642 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2696
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2697 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2756
Query: 236 CNTGGL 241
NTG
Sbjct: 2757 INTGWF 2762
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 745 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 801
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 802 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 857
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 858 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 916
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 917 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 976
Query: 236 CNTGGL 241
NTG
Sbjct: 977 INTGWF 982
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1551
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1552 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1610
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1611 IPQFPIRITTTGGIG 1625
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1435 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1494
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1495 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1554
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1555 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1613
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1614 FPIRITTTGGIG 1625
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2496 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2555
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2556 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2615
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2616 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2670
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2671 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2724
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 803 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 862
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 863 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 922
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 923 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 982
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 983 NTGHANT---GLANAGTFGTG 1000
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 432
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 655 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 713
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 714 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 773
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 774 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 833
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 834 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 893
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 894 SGIGNIGLFNSGTGNVGFFNSGTG 917
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 197 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 256
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 257 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 316
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 317 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 376
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 377 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 421
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 266 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 325
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 326 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 385
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 386 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3082 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3141
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3142 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3201
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3202 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3261
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3262 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3311
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2495 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2554
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2555 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2614
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2615 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2669
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2670 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2704
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2495 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2554
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2555 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2614
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2615 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2669
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2670 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2697
>gi|297733008|ref|ZP_06962126.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
Length = 3725
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3156 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3215
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3216 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3275
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3276 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3335
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3336 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3379
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3156 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3215
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3216 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3275
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3276 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3335
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3336 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3378
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2049 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2108
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2109 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2168
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2169 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2227
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2228 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2281
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2282 SIHMDPIVLVPATTIP 2297
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1969 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2028
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2029 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2088
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2089 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2148
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2149 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2207
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1969 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2028
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2029 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2088
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2089 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2148
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2149 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2207
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2565 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2624
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2625 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2679
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2680 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2739
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2740 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2779
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1371 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1430
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1431 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1487
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1488 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1547
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1548 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1586
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 769 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 828
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 829 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 883
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 884 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 943
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 944 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 999
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2569 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2628
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2629 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2683
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2684 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2743
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2744 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2779
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2051 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2110
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2111 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2170
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2171 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2229
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2230 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2283
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2284 HMDPIVLVPATTIPAQ 2299
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1373 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1427
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1428 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1484
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1485 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1544
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1545 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1578
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2534 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2590
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2591 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2650
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2651 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2705
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2706 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2765
Query: 236 CNTGGL 241
NTG
Sbjct: 2766 INTGWF 2771
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 754 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 810
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 811 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 866
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 867 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 925
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 926 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 985
Query: 236 CNTGGL 241
NTG
Sbjct: 986 INTGWF 991
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1441 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1500
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1501 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1560
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1561 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1619
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1620 IPQFPIRITTTGGIG 1634
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1444 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1503
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1504 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1563
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1564 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1622
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1623 FPIRITTTGGIG 1634
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2505 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2564
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2565 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2624
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2625 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2679
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2680 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2733
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 812 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 871
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 872 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 931
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 932 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 991
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 992 NTGHANT---GLANAGTFGTG 1009
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 441
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 445
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 445
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 664 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 722
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 723 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 782
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 783 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 842
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 843 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 902
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 903 SGIGNIGLFNSGTGNVGFFNSGTG 926
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 206 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 265
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 266 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 325
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 326 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 385
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 386 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 430
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 275 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 334
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 335 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 394
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 395 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 445
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3091 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3150
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3151 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3210
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3211 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3270
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3271 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3320
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2504 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2563
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2564 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2623
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2624 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2678
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2679 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2713
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2504 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2563
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2564 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2623
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2624 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2678
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2679 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2706
>gi|375297625|ref|YP_005101892.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|328460130|gb|AEB05553.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length = 3787
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3218 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3277
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3278 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3337
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3338 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3397
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3398 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3441
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3218 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3277
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3278 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3337
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3338 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3397
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3398 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3440
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2111 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2170
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2171 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2230
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2231 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2289
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2290 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2343
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2344 SIHMDPIVLVPATTIP 2359
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 2031 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2090
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2091 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2150
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2151 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2210
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2211 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2269
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 2031 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2090
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2091 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2150
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2151 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2210
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2211 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2269
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2627 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2686
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2687 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2741
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2742 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2801
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2802 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2841
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1433 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1492
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1493 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1549
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1550 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1609
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1610 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1648
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 831 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 890
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 891 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 945
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 946 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 1005
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 1006 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 1061
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2631 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2690
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2691 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2745
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2746 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2805
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2806 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2841
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2113 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2172
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2173 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2232
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2233 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2291
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2292 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2345
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2346 HMDPIVLVPATTIPAQ 2361
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1435 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1489
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1490 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1546
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1547 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1606
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1607 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1640
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2596 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2652
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2653 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2712
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2713 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2767
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2768 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2827
Query: 236 CNTGGL 241
NTG
Sbjct: 2828 INTGWF 2833
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 816 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 872
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 873 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 928
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 929 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 987
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 988 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 1047
Query: 236 CNTGGL 241
NTG
Sbjct: 1048 INTGWF 1053
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1503 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1562
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1563 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1622
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1623 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1681
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1682 IPQFPIRITTTGGIG 1696
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1506 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1565
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1566 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1625
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1626 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1684
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1685 FPIRITTTGGIG 1696
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2567 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2626
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2627 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2686
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2687 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2741
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2742 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2795
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 874 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 933
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 934 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 993
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 994 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 1053
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 1054 NTGHANT---GLANAGTFGTG 1071
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 336 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 395
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 396 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 455
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 456 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 503
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 336 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 395
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 396 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 455
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 456 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 507
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 336 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 395
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 396 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 455
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 456 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 507
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 726 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 784
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 785 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 844
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 845 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 904
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 905 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 964
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 965 SGIGNIGLFNSGTGNVGFFNSGTG 988
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 268 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 327
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 328 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 387
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 388 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 447
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 448 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 492
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 337 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 396
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 397 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 456
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 457 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 507
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3153 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3212
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3213 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3272
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3273 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3332
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3333 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3382
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2566 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2625
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2626 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2685
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2686 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2740
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2741 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2775
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2566 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2625
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2626 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2685
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2686 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2740
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2741 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2768
>gi|422814584|ref|ZP_16862808.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|323717991|gb|EGB27177.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 3702
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3133 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3192
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3193 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3252
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3253 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3312
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3313 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3356
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3133 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3192
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3193 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3252
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3253 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3312
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3313 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3355
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2026 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2085
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2086 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2145
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2146 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2204
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2205 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2258
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2259 SIHMDPIVLVPATTIP 2274
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1946 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2005
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2006 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2065
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2066 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2125
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2126 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2184
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1946 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2005
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2006 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2065
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2066 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2125
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2126 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2184
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2542 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2601
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2602 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2656
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2657 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2716
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2717 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2756
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1348 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1407
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1408 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1464
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1465 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1524
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1525 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1563
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 746 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 805
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 806 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 860
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 861 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 920
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 921 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 976
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2546 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2605
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2606 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2660
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2661 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2720
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2721 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2756
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2028 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2087
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2088 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2147
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2148 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2206
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2207 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2260
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2261 HMDPIVLVPATTIPAQ 2276
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1350 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1404
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1405 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1461
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1462 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1521
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1522 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1555
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2511 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2567
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2568 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2627
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2628 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2682
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2683 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2742
Query: 236 CNTGGL 241
NTG
Sbjct: 2743 INTGWF 2748
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 731 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 787
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 788 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 843
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 844 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 902
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 903 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 962
Query: 236 CNTGGL 241
NTG
Sbjct: 963 INTGWF 968
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1418 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1477
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1478 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1537
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1538 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1596
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1597 IPQFPIRITTTGGIG 1611
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1421 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1480
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1481 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1540
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1541 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1599
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1600 FPIRITTTGGIG 1611
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2482 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2541
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2542 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2601
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2602 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2656
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2657 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2710
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 789 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 848
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 849 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 908
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 909 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 968
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 969 NTGHANT---GLANAGTFGTG 986
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 251 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 310
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 311 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 370
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 371 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 418
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 251 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 310
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 311 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 370
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 371 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 422
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 251 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 310
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 311 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 370
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 371 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 422
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 641 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 699
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 700 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 759
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 760 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 819
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 820 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 879
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 880 SGIGNIGLFNSGTGNVGFFNSGTG 903
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 183 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 242
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 243 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 302
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 303 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 362
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 363 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 407
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 252 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 312 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 371
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 372 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 422
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3068 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3127
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3128 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3187
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3188 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3247
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3248 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3297
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2481 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2540
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2541 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2600
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2601 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2655
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2656 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2690
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2481 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2540
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2541 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2600
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2601 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2655
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2656 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2683
>gi|289755480|ref|ZP_06514858.1| predicted protein [Mycobacterium tuberculosis EAS054]
gi|289696067|gb|EFD63496.1| predicted protein [Mycobacterium tuberculosis EAS054]
Length = 3716
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3147 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3206
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3207 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3266
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3267 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3326
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3327 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3370
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3147 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3206
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3207 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3266
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3267 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3326
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3327 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3369
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2040 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2099
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2100 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2159
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2160 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2218
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2219 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2272
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2273 SIHMDPIVLVPATTIP 2288
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1960 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2019
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2020 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2079
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2080 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2139
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2140 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1960 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2019
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2020 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2079
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2080 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2139
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2140 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2556 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2615
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2616 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2670
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2671 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2730
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2731 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2770
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1362 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1421
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1422 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1478
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1479 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1538
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1539 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1577
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 760 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 819
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 820 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 874
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N + G +GL N TG +G N TG G+ N G+ N
Sbjct: 875 GNIGIGLVGDHRTGIGGLNSDIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 934
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG N G + NTG
Sbjct: 935 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINIGWFNTGHANTG 990
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2560 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2619
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2620 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2674
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2675 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2734
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2735 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2770
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2042 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2101
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2102 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2161
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2162 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2220
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2221 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2274
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2275 HMDPIVLVPATTIPAQ 2290
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1364 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1418
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1419 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1475
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1476 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1535
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1536 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1569
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 97/236 (41%), Gaps = 15/236 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 745 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 801
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 802 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 857
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N + G +GL N TG +G N T
Sbjct: 858 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSDIGNIGLFNSGTGNVGFFNSGT 916
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGL 231
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 917 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGF 972
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2525 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2581
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2582 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2641
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2642 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2696
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2697 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2756
Query: 236 CNTGGL 241
NTG
Sbjct: 2757 INTGWF 2762
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1551
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1552 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1610
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1611 IPQFPIRITTTGGIG 1625
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1435 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1494
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1495 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1554
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1555 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1613
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1614 FPIRITTTGGIG 1625
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2496 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2555
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2556 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2615
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2616 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2670
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2671 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2724
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 87/203 (42%), Gaps = 21/203 (10%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 803 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 862
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N + G +GL N TG +G N TG G+
Sbjct: 863 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSDIGNIGLFNSGTGNVGFFNSGTGNFGIG 922
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG N GG+
Sbjct: 923 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGF-----NPGGI 977
Query: 182 GLRNCNTGGL--GLRNCNTGGLG 202
+ NTG GL N T G G
Sbjct: 978 NIGWFNTGHANTGLANAGTFGTG 1000
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 104/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 655 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 713
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 714 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 773
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 774 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 833
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 834 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 893
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
+ G +GL N TG +G N TG
Sbjct: 894 SDIGNIGLFNSGTGNVGFFNSGTG 917
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 432
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 197 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 256
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 257 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 316
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 317 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 376
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 377 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 421
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 266 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 325
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 326 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 385
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 386 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3082 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3141
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3142 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3201
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3202 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3261
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3262 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3311
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2495 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2554
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2555 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2614
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2615 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2669
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2670 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2704
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2495 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2554
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2555 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2614
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2615 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2669
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2670 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2697
>gi|289747170|ref|ZP_06506548.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289687698|gb|EFD55186.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 1073
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 504 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 563
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 564 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 623
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 624 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 683
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 684 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 727
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 504 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 563
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 564 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 623
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 624 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 683
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 684 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 726
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 439 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 498
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 499 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 558
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 559 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 618
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 619 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 668
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 21 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGH 123
Query: 136 CNTG 139
NTG
Sbjct: 124 TNTG 127
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 31 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGH 123
Query: 146 CNTG 149
NTG
Sbjct: 124 TNTG 127
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 41 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGH 123
Query: 156 CNTG 159
NTG
Sbjct: 124 TNTG 127
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 51 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGH 123
Query: 166 CNTG 169
NTG
Sbjct: 124 TNTG 127
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 61 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGH 123
Query: 176 CNTG 179
NTG
Sbjct: 124 TNTG 127
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 71 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGH 123
Query: 186 CNTG 189
NTG
Sbjct: 124 TNTG 127
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 81 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGH 123
Query: 196 CNTG 199
NTG
Sbjct: 124 TNTG 127
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 91 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGH 123
Query: 206 CNTG 209
NTG
Sbjct: 124 TNTG 127
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 101 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGH 123
Query: 216 CNTG 219
NTG
Sbjct: 124 TNTG 127
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 111 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 169 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGH 123
Query: 226 CNTG 229
NTG
Sbjct: 124 TNTG 127
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 121 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGH 123
Query: 236 CNTG 239
NTG
Sbjct: 124 TNTG 127
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 12 GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 5 GLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSF 64
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G+ N TG GL N + G+ N NTG + NTGG NTG +
Sbjct: 65 NTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHT 124
Query: 127 NTG 129
NTG
Sbjct: 125 NTG 127
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 54/116 (46%), Gaps = 5/116 (4%)
Query: 131 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 188
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ N +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N + G+ N NTG + NTGG NTG
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWF 119
>gi|148824559|ref|YP_001289313.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|253800397|ref|YP_003033398.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|392433836|ref|YP_006474880.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|148723086|gb|ABR07711.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|253321900|gb|ACT26503.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|392055245|gb|AFM50803.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 3787
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3218 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3277
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3278 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3337
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3338 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3397
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3398 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3441
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3218 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3277
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3278 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3337
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3338 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3397
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3398 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3440
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2111 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2170
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2171 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2230
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2231 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2289
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2290 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2343
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2344 SIHMDPIVLVPATTIP 2359
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 2031 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2090
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2091 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2150
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2151 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2210
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2211 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2269
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 2031 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2090
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2091 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2150
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2151 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2210
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2211 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2269
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2627 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2686
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2687 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2741
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2742 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2801
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2802 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2841
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1433 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1492
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1493 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1549
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1550 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1609
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1610 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1648
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 831 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 890
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 891 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 945
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 946 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 1005
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 1006 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 1061
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2631 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2690
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2691 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2745
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2746 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2805
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2806 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2841
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2113 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2172
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2173 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2232
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2233 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2291
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2292 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2345
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2346 HMDPIVLVPATTIPAQ 2361
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1435 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1489
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1490 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1546
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1547 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1606
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1607 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1640
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2596 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2652
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2653 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2712
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2713 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2767
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2768 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2827
Query: 236 CNTGGL 241
NTG
Sbjct: 2828 INTGWF 2833
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 816 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 872
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 873 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 928
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 929 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 987
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 988 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 1047
Query: 236 CNTGGL 241
NTG
Sbjct: 1048 INTGWF 1053
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1503 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1562
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1563 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1622
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1623 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1681
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1682 IPQFPIRITTTGGIG 1696
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1506 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1565
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1566 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1625
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1626 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1684
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1685 FPIRITTTGGIG 1696
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2567 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2626
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2627 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2686
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2687 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2741
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2742 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2795
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 874 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 933
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 934 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 993
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 994 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 1053
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 1054 NTGHANT---GLANAGTFGTG 1071
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 336 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 395
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 396 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 455
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 456 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 503
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 336 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 395
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 396 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 455
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 456 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 507
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 336 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 395
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 396 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 455
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 456 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 507
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 726 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 784
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 785 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 844
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 845 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 904
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 905 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 964
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 965 SGIGNIGLFNSGTGNVGFFNSGTG 988
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 268 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 327
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 328 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 387
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 388 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 447
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 448 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 492
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 337 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 396
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 397 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 456
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 457 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 507
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3153 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3212
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3213 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3272
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3273 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3332
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3333 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3382
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2566 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2625
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2626 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2685
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2686 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2740
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2741 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2775
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2566 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2625
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2626 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2685
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2686 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2740
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2741 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2768
>gi|289759502|ref|ZP_06518880.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289715066|gb|EFD79078.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 1308
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 991 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1050
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1051 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1110
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1111 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1170
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 1171 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1214
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 991 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1050
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1051 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1110
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1111 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1170
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 1171 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 1213
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 400 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 459
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 460 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 514
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 515 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 574
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 575 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 614
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 96/229 (41%), Gaps = 12/229 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 404 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 463
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 464 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 518
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 519 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 578
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTGG NTG + NTG N TG +
Sbjct: 579 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTGIANSGNVGTGAFM 627
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 369 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 425
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 426 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 485
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 486 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 540
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 541 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 600
Query: 236 CNTGGL 241
NTG
Sbjct: 601 INTGWF 606
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 340 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 399
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 400 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 459
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 460 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 514
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 515 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 568
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 926 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 985
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 986 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 1045
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 1046 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 1105
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 1106 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 1155
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 339 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 398
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 399 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 458
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 459 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 513
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 514 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 548
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 339 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 398
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 399 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 458
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 459 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 513
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 514 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 541
>gi|385996224|ref|YP_005914522.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|424948986|ref|ZP_18364682.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
gi|339296178|gb|AEJ48289.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|358233501|dbj|GAA46993.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
Length = 1662
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1093 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1152
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1153 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1212
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1213 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1272
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 1273 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1316
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1093 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1152
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1153 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1212
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1213 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1272
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 1273 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 1315
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 502 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 561
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 562 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 616
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 617 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 676
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 677 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 716
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 506 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 565
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 566 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 620
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 621 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 680
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 681 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 716
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 471 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 527
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 528 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 587
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 588 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 642
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 643 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 702
Query: 236 CNTGGL 241
NTG
Sbjct: 703 INTGWF 708
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 442 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 501
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 502 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 561
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 562 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 616
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 617 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 670
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 98/241 (40%), Gaps = 20/241 (8%)
Query: 43 LRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
+ N TG G+GL G+G N TG LGL N TG +G N TG GL N +
Sbjct: 1 MANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYS 60
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
G+ N T GL N GL N NTG L + + NTGG+ NTG + N
Sbjct: 61 TGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTN 120
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLGLRNC 216
TG N NTG + N G L + + G +G + + G L + N
Sbjct: 121 TGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTLLDLN------ETL 173
Query: 217 NTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENASRSENEPCLVKIKFT 269
N G + + + G+ L + + G +P+ A + + S + LV
Sbjct: 174 NLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESIHMDPIVLVPATTI 233
Query: 270 P 270
P
Sbjct: 234 P 234
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 99/243 (40%), Gaps = 21/243 (8%)
Query: 23 LRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
+ N TG G+GL G+G N TG LGL N TG +G N TG GL N +
Sbjct: 1 MANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYS 60
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
G+ N T GL N GL N NTG L + + NTGG+ NTG + N
Sbjct: 61 TGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTN 120
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLGLRNC 196
TG N NTG + N G L + + G +G + + G L + N
Sbjct: 121 TGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTLLDLN------ETL 173
Query: 197 NTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTGGL----IVPKSKR 248
N G + + + G+ L + + G + + + L + + +VP +
Sbjct: 174 NLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESIHMDPIVLVPATTI 233
Query: 249 GAQ 251
AQ
Sbjct: 234 PAQ 236
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 1028 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 1087
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1088 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 1147
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 1148 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 1207
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 1208 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 1257
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 78/182 (42%), Gaps = 11/182 (6%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
G+G N TG LGL N TG +G N TG GL N + G+ N T GL N
Sbjct: 20 GIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNF 79
Query: 80 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
GL N NTG L + + NTGG+ NTG + NTG N NTG +
Sbjct: 80 NTGLANAGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSF 139
Query: 137 NTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
N G L + + G +G + + G L + N N G + + + G+ L +
Sbjct: 140 NNGALWTGDYH-GLVGFSFSIDIAGSTLLDLN------ETLNLGPIHIEQIDIPGMSLFD 192
Query: 196 CN 197
+
Sbjct: 193 VH 194
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 441 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 500
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 501 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 560
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 561 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 615
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 616 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 650
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 441 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 500
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 501 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 560
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 561 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 615
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 616 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 643
>gi|306777690|ref|ZP_07416027.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu001]
gi|308213981|gb|EFO73380.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length = 3727
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3158 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3217
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3218 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3277
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3278 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3337
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3338 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3381
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3158 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3217
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3218 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3277
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3278 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3337
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3338 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3380
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2051 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2110
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2111 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2170
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2171 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2229
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2230 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2283
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2284 SIHMDPIVLVPATTIP 2299
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1971 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2030
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2031 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2090
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2091 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2150
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2151 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2209
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1971 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2030
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2031 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2090
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2091 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2150
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2151 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2209
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2567 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2626
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2627 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2681
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2682 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2741
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2742 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2781
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1373 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1432
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1433 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1489
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1490 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1549
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1550 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1588
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 771 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 830
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 831 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 885
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 886 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 945
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 946 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 1001
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2571 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2630
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2631 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2685
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2686 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2745
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2746 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2781
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2053 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2112
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2113 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2172
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2173 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2231
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2232 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2285
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2286 HMDPIVLVPATTIPAQ 2301
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1375 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1429
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1430 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1486
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1487 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1546
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1547 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1580
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2536 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2592
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2593 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2652
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2653 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2707
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2708 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2767
Query: 236 CNTGGL 241
NTG
Sbjct: 2768 INTGWF 2773
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 756 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 812
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 813 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 868
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 869 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 927
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 928 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 987
Query: 236 CNTGGL 241
NTG
Sbjct: 988 INTGWF 993
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1443 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1502
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1503 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1562
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1563 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1621
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1622 IPQFPIRITTTGGIG 1636
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1446 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1505
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1506 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1565
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1566 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1624
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1625 FPIRITTTGGIG 1636
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2507 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2566
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2567 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2626
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2627 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2681
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2682 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2735
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 814 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 873
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 874 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 933
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 934 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 993
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 994 NTGHANT---GLANAGTFGTG 1011
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 276 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 335
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 336 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 395
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 396 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 443
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 276 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 335
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 336 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 395
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 396 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 447
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 276 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 335
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 336 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 395
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 396 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 447
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 666 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 724
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 725 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 784
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 785 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 844
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 845 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 904
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 905 SGIGNIGLFNSGTGNVGFFNSGTG 928
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 208 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 267
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 268 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 327
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 328 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 387
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 388 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 432
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 277 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 336
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 337 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 396
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 397 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 447
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 3093 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3152
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3153 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3212
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3213 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3272
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3273 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3322
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2506 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2565
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2566 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2625
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2626 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2680
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2681 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2715
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2506 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2565
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2566 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2625
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2626 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2680
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2681 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2708
>gi|308406130|ref|ZP_07669518.1| hypothetical protein TMLG_03838 [Mycobacterium tuberculosis SUMu012]
gi|308364409|gb|EFP53260.1| hypothetical protein TMLG_03838 [Mycobacterium tuberculosis SUMu012]
Length = 2895
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 2326 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 2385
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 2386 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 2445
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 2446 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 2505
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 2506 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 2549
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 2326 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 2385
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 2386 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 2445
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 2446 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 2505
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 2506 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 2548
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1219 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 1278
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 1279 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 1338
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 1339 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 1397
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 1398 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 1451
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 1452 SIHMDPIVLVPATTIP 1467
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGL- 73
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1139 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1198
Query: 74 ----------------RNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1199 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1258
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1259 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 1318
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 1319 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 1377
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGL- 83
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1139 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1198
Query: 84 ----------------RNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1199 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1258
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1259 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 1318
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 1319 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 1377
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 1735 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 1794
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 1795 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 1849
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 1850 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 1909
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 1910 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 1949
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 541 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 600
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 601 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 657
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 658 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 717
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 718 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 756
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 1739 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 1798
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 1799 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 1853
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 1854 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 1913
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 1914 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 1949
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1221 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 1280
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 1281 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 1340
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 1341 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 1399
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 1400 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 1453
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 1454 HMDPIVLVPATTIPAQ 1469
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 543 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 597
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 598 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 654
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 655 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 714
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 715 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 748
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 1704 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 1760
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 1761 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 1820
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 1821 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 1875
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 1876 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 1935
Query: 236 CNTGGL 241
NTG
Sbjct: 1936 INTGWF 1941
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 611 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 670
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 671 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 730
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 731 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 789
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 790 IPQFPIRITTTGGIG 804
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 614 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 673
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 674 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 733
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 734 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 792
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 793 FPIRITTTGGIG 804
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 1675 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 1734
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 1735 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 1794
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 1795 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 1849
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 1850 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 1903
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 2261 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 2320
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 2321 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 2380
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 2381 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 2440
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 2441 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 2490
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 1674 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 1733
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 1734 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 1793
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 1794 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 1848
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 1849 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 1883
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 77/185 (41%), Gaps = 15/185 (8%)
Query: 25 NCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--G 80
N G LG N G G+ N G G+ N GL N G +G N TG G
Sbjct: 3 NIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGTGNIG 57
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
+GL + G+G N G +GL N TG +G N TG G+ N G+ N T
Sbjct: 58 IGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTAS 117
Query: 141 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
GL N + G+ N NTG + NTGG NTG + NT GL N
Sbjct: 118 TGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAG 174
Query: 198 TGGLG 202
T G G
Sbjct: 175 TFGTG 179
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 77/185 (41%), Gaps = 15/185 (8%)
Query: 45 NCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--G 100
N G LG N G G+ N G G+ N GL N G +G N TG G
Sbjct: 3 NIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGTGNIG 57
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 160
+GL + G+G N G +GL N TG +G N TG G+ N G+ N T
Sbjct: 58 IGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTAS 117
Query: 161 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
GL N + G+ N NTG + NTGG NTG + NT GL N
Sbjct: 118 TGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAG 174
Query: 218 TGGLG 222
T G G
Sbjct: 175 TFGTG 179
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 77/185 (41%), Gaps = 15/185 (8%)
Query: 55 NCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--G 110
N G LG N G G+ N G G+ N GL N G +G N TG G
Sbjct: 3 NIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGTGNIG 57
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N G +GL N TG +G N TG G+ N G+ N T
Sbjct: 58 IGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTAS 117
Query: 171 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
GL N + G+ N NTG + NTGG NTG + NT GL N
Sbjct: 118 TGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAG 174
Query: 228 TGGLG 232
T G G
Sbjct: 175 TFGTG 179
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 68/160 (42%), Gaps = 8/160 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +G N GL N G +G N TG G+GL + G+G N G +GL N
Sbjct: 23 VGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFN 82
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 132
TG +G N TG G+ N G+ N T GL N + G+ N NTG
Sbjct: 83 SGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFN 142
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
+ NTGG NTG + NT GL N T G G
Sbjct: 143 AGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTG 179
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 1674 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 1733
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 1734 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 1793
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 1794 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 1848
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 1849 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 1876
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 68/164 (41%), Gaps = 12/164 (7%)
Query: 85 NCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--G 140
N G LG N G G+ N G G+ N GL N G +G N TG G
Sbjct: 3 NIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGTGNIG 57
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+GL + G+G N G +GL N TG +G N TG G+ N G+ N T
Sbjct: 58 IGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTAS 117
Query: 201 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 241
GL N + G+ N NTG + NTGG NTG
Sbjct: 118 TGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 161
>gi|306805168|ref|ZP_07441836.1| hypothetical protein TMHG_03873, partial [Mycobacterium tuberculosis
SUMu008]
gi|308348283|gb|EFP37134.1| hypothetical protein TMHG_03873 [Mycobacterium tuberculosis SUMu008]
Length = 3633
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3064 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3123
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3124 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3183
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3184 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3243
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3244 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3287
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3064 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3123
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3124 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3183
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3184 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3243
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3244 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3286
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1957 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2016
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2017 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2076
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2077 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2135
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2136 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2189
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2190 SIHMDPIVLVPATTIP 2205
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1877 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1936
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1937 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1996
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1997 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2056
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2057 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2115
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1877 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1936
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1937 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1996
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1997 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2056
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2057 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2115
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2473 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2532
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2533 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2587
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2588 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2647
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2648 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2687
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1279 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1338
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1339 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1395
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1396 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1455
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1456 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1494
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2477 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2536
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2537 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2591
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2592 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2651
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2652 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2687
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 677 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 736
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 737 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 791
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 792 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 851
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 852 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 907
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1959 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2018
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2019 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2078
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2079 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2137
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2138 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2191
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2192 HMDPIVLVPATTIPAQ 2207
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1281 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1335
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1336 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1392
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1393 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1452
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1453 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1486
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2442 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2498
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2499 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2558
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2559 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2613
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2614 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2673
Query: 236 CNTGGL 241
NTG
Sbjct: 2674 INTGWF 2679
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 662 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 718
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 719 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 774
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 775 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 833
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 834 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 893
Query: 236 CNTGGL 241
NTG
Sbjct: 894 INTGWF 899
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1349 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1408
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1409 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1468
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1469 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1527
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1528 IPQFPIRITTTGGIG 1542
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1352 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1411
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1412 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1471
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1472 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1530
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1531 FPIRITTTGGIG 1542
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2413 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2472
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2473 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2532
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2533 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2587
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2588 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2641
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 720 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 779
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 780 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 839
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 840 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 899
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 900 NTGHANT---GLANAGTFGTG 917
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 182 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 241
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 242 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 301
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 302 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 349
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 182 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 241
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 242 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 301
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 302 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 353
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 182 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 241
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 242 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 301
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 302 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 353
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 114 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 173
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 174 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 233
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 234 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 293
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 294 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 338
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 572 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 630
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 631 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 690
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 691 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 750
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 751 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 810
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 811 SGIGNIGLFNSGTGNVGFFNSGTG 834
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 183 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 242
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 243 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 302
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 303 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 353
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 2999 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 3058
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 3059 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3118
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3119 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3178
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3179 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3228
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2412 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2471
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2472 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2531
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2532 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2586
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2587 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2621
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2412 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2471
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2472 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2531
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2532 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2586
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2587 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2614
>gi|289449047|ref|ZP_06438791.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289422005|gb|EFD19206.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 3536
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 2967 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3026
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3027 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3086
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3087 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3146
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 3147 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3190
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 2967 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 3026
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 3027 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 3086
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 3087 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 3146
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 3147 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 3189
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1860 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 1919
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 1920 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 1979
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 1980 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2038
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2039 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2092
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2093 SIHMDPIVLVPATTIP 2108
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1780 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1839
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1840 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1899
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1900 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 1959
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 1960 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2018
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1780 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1839
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1840 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1899
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1900 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 1959
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 1960 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2018
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2376 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2435
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2436 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2490
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 2491 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 2550
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 2551 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2590
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1182 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1241
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1242 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1298
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1299 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1358
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1359 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1397
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2380 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 2439
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 2440 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 2494
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2495 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2554
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 2555 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2590
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 580 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 639
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 640 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 694
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 695 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 754
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 755 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 810
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1862 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 1921
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 1922 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 1981
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 1982 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2040
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2041 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2094
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2095 HMDPIVLVPATTIPAQ 2110
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1184 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1238
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1239 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1295
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1296 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1355
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1356 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1389
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2345 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2401
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2402 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2461
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2462 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2516
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2517 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2576
Query: 236 CNTGGL 241
NTG
Sbjct: 2577 INTGWF 2582
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 565 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 621
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 622 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 677
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 678 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 736
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 737 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 796
Query: 236 CNTGGL 241
NTG
Sbjct: 797 INTGWF 802
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1252 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1311
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1312 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1371
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1372 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1430
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1431 IPQFPIRITTTGGIG 1445
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1255 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1314
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1315 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1374
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1375 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1433
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1434 FPIRITTTGGIG 1445
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2316 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2375
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2376 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2435
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2436 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2490
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2491 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2544
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 623 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 682
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 683 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 742
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 743 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 802
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 803 NTGHANT---GLANAGTFGTG 820
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 85 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 144
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 145 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 204
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 205 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 252
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 85 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 144
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 145 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 204
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 205 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 256
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 85 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 144
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 145 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 204
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 205 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 256
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 475 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 533
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 534 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 593
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 594 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 653
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 654 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 713
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 714 SGIGNIGLFNSGTGNVGFFNSGTG 737
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 17 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 76
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 77 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 136
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 137 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 196
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 197 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 241
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 86 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 145
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 146 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 205
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 206 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 256
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 2902 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 2961
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 2962 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 3021
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 3022 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 3081
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 3082 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3131
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2315 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2374
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2375 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2434
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2435 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2489
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2490 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2524
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2315 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2374
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2375 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2434
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2435 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2489
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2490 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2517
>gi|308371316|ref|ZP_07424556.2| hypothetical protein TMCG_02499 [Mycobacterium tuberculosis SUMu003]
gi|308378287|ref|ZP_07668709.1| hypothetical protein TMIG_03622 [Mycobacterium tuberculosis SUMu009]
gi|308380663|ref|ZP_07669241.1| hypothetical protein TMKG_03697 [Mycobacterium tuberculosis SUMu011]
gi|308329157|gb|EFP18008.1| hypothetical protein TMCG_02499 [Mycobacterium tuberculosis SUMu003]
gi|308353007|gb|EFP41858.1| hypothetical protein TMIG_03622 [Mycobacterium tuberculosis SUMu009]
gi|308360797|gb|EFP49648.1| hypothetical protein TMKG_03697 [Mycobacterium tuberculosis SUMu011]
Length = 2973
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 2404 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 2463
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 2464 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 2523
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 2524 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 2583
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 2584 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 2627
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 2404 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 2463
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 2464 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 2523
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 2524 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 2583
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 2584 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 2626
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1297 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 1356
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 1357 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 1416
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 1417 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 1475
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 1476 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 1529
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 1530 SIHMDPIVLVPATTIP 1545
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1217 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1276
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1277 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1336
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1337 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 1396
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 1397 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 1455
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1217 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1276
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1277 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1336
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1337 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 1396
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 1397 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 1455
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 1813 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 1872
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 1873 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 1927
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 1928 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 1987
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 1988 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2027
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 619 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 678
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 679 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 735
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 736 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 795
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 796 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 834
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 17 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 76
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 77 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 131
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 132 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 191
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 192 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 247
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 1817 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 1876
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 1877 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 1931
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 1932 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 1991
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 1992 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2027
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1299 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 1358
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 1359 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 1418
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 1419 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 1477
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 1478 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 1531
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 1532 HMDPIVLVPATTIPAQ 1547
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 621 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 675
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 676 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 732
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 733 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 792
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 793 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 826
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 1782 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 1838
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 1839 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 1898
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 1899 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 1953
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 1954 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2013
Query: 236 CNTGGL 241
NTG
Sbjct: 2014 INTGWF 2019
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 2 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 58
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 59 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 114
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 115 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 173
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 174 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 233
Query: 236 CNTGGL 241
NTG
Sbjct: 234 INTGWF 239
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 689 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 748
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 749 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 808
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 809 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 867
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 868 IPQFPIRITTTGGIG 882
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 692 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 751
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 752 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 811
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 812 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 870
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 871 FPIRITTTGGIG 882
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 1753 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 1812
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 1813 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 1872
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 1873 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 1927
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 1928 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 1981
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 60 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 119
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 120 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 179
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 180 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 239
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 240 NTGHANT---GLANAGTFGTG 257
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 2339 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 2398
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 2399 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 2458
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 2459 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 2518
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 2519 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 2568
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 1752 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 1811
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 1812 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 1871
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 1872 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 1926
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 1927 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 1961
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 1752 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 1811
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 1812 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 1871
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 1872 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 1926
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 1927 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 1954
>gi|379029711|dbj|BAL67444.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 1600
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1031 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1090
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1091 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1150
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1151 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1210
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 1211 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1254
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1031 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1090
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1091 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1150
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1151 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1210
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 1211 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 1253
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 440 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 499
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 500 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 554
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 555 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 614
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 615 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 654
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 444 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 503
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 504 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 558
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 559 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 618
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 619 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 654
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 409 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 465
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 466 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 525
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 526 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 580
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 581 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 640
Query: 236 CNTGGL 241
NTG
Sbjct: 641 INTGWF 646
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 380 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 439
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 440 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 499
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 500 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 554
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 555 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 608
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 966 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 1025
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1026 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 1085
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 1086 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 1145
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 1146 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 1195
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 379 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 438
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 439 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 498
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 499 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 553
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 554 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 588
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 379 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 438
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 439 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 498
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 499 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 553
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 554 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 581
>gi|440582842|emb|CCG13245.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 1600
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1031 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1090
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1091 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1150
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1151 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1210
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 1211 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1254
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1031 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1090
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1091 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1150
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1151 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1210
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 1211 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 1253
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 440 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 499
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 500 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 554
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 555 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 614
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 615 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 654
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 444 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 503
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 504 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 558
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 559 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 618
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 619 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 654
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 409 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 465
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 466 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 525
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 526 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 580
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 581 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 640
Query: 236 CNTGGL 241
NTG
Sbjct: 641 INTGWF 646
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 380 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 439
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 440 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 499
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 500 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 554
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 555 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 608
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 966 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 1025
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1026 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 1085
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 1086 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 1145
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 1146 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 1195
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 379 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 438
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 439 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 498
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 499 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 553
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 554 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 588
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 379 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 438
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 439 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 498
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 499 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 553
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 554 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 581
>gi|183981653|ref|YP_001849944.1| PPE family protein [Mycobacterium marinum M]
gi|183174979|gb|ACC40089.1| PPE family protein [Mycobacterium marinum M]
Length = 2754
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 101/242 (41%), Gaps = 14/242 (5%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ + G N G +G N +G +G N +G +G N G LG N +G
Sbjct: 1919 PVNVGFANNGAGNVGFGNVGFSNVGSGNIGSFNVGSGNIGDYNIGPGNLGDYN-----IG 1973
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGG 120
L N +G N +G+ N G N N G+GL G G N TG
Sbjct: 1974 LGNLGDSSIGFGNAGDHNVGVANAGFNNFGFANTGSNNIGIGLNGDGQVGFGALNSGTGN 2033
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+GL N T +GL N TG G+ N G+ N GL N GL N G
Sbjct: 2034 IGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNA-----GLVNTGVGN 2088
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
G N N+GG + NTG + NTGGL + NTG L + NTG + + NTG
Sbjct: 2089 AG--NYNSGGFNTGSTNTGSFNPGDYNTGGLNQGDYNTGYLNSGDYNTGFVNAGDVNTGA 2146
Query: 241 LI 242
I
Sbjct: 2147 FI 2148
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 92/224 (41%), Gaps = 14/224 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
G +G N + G N + +G N G LG N +GL N +GL N
Sbjct: 1496 GNIGFGNVGSANAGNFNVGSANIGDYNIGPGNLGDYN-----IGLGNLGDSSIGLANAGD 1550
Query: 89 GGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
LG+ N G N N G+GL G+G N TG +GL N T +GL N
Sbjct: 1551 HNLGVANAGFNNFGFANTGNNNIGIGLSGDGQVGIGALNSGTGNIGLFNSGTDNIGLFNS 1610
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
TG G+ N G+ N GL N GL N G G N N+GGL +
Sbjct: 1611 GTGNFGIGNSGDYNTGIGNAGATNTGLLNA-----GLVNTGVGNAG--NYNSGGLNAGHT 1663
Query: 207 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
NTG + NTG L N NTG + + NTG I GA
Sbjct: 1664 NTGSFNSGDYNTGYLNPGNYNTGMVNSGDVNTGAFISGDYSNGA 1707
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 89/218 (40%), Gaps = 15/218 (6%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG----GL 91
G LG N G LG N G LG N G G N G G N NTG G+
Sbjct: 2440 GNLGDHNIGPGNLGDYNIGLGNLGDSNVGFGNAGDHNVGVGNAGFNNFGFANTGSNNIGI 2499
Query: 92 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
GL G G N TG +GL N T +GL N TG +GL N TG G+ N
Sbjct: 2500 GLSGDGQVGFGALNSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGTGSFGIGNSGNYNT 2559
Query: 152 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
G+ N GL N GL N G G N N+GG + NTG + NTG L
Sbjct: 2560 GIGNAGATNTGLFNT-----GLVNTGVGNAG--NYNSGGFNTGSTNTGSFNSGDHNTGYL 2612
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRG 249
+ NTG + NTG + + G V +G
Sbjct: 2613 NSGDYNTGLANSGDVNTGAF-ISGNYSNGFFVDGDHQG 2649
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 97/240 (40%), Gaps = 15/240 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
+G N G +G N LGL N +G N +G +G N +G G N G
Sbjct: 196 VGFANAGQGNVGAANIGDFNLGLGNIGSG-----NVGSGNIGGINVGSGNRGSYNIGPGN 250
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG----GLGLRNCNTGGLGL 133
LG N G LG + G G N G N NTG G+GL G+G
Sbjct: 251 LGDYNIGLGNLGDSSVGFGNAGDHNVGVANAGFNNFGFANTGSNNIGIGLSGDGQVGIGA 310
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 190
N TG +GL N T +GL N TG G+ N G+ N GL N NTG
Sbjct: 311 LNSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGV 370
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
N N+GG + NTG + NTG L N NTG + NTG I GA
Sbjct: 371 GNAGNYNSGGFNAGHTNTGSFNSGDYNTGYLNPGNYNTGLANSGDVNTGAFISGNYSNGA 430
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 91/224 (40%), Gaps = 14/224 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
G +G N +G +G N +G +G N LG N +GL N +GL N
Sbjct: 1067 GNIGSGNVGSGNIGGANVGSGNIGDYNIGPANLGDYN-----IGLGNLGDSSIGLANAGD 1121
Query: 89 GGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
LG+ N G N N G+GL G G N TG +GL N T +GL N
Sbjct: 1122 HNLGVANAGFNNFGFANTGNNNIGIGLSGDGQVGFGALNSGTGNIGLFNSGTDNIGLFNS 1181
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
TG G+ N G+ N GL N GL N G G N N+GG +
Sbjct: 1182 GTGNFGIGNSGDYNTGIGNAGATNTGLLNA-----GLVNTGVGNAG--NYNSGGFNTGST 1234
Query: 207 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
NTG + NTG L N NTG + NTG I GA
Sbjct: 1235 NTGSFNSGDYNTGYLNPGNYNTGLANSGDVNTGAFISGDYSNGA 1278
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 81/197 (41%), Gaps = 14/197 (7%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG----GLGLR 64
G N G LG N G LG N G G N G G N NTG G+GL
Sbjct: 2443 GDHNIGPGNLGDYNIGLGNLGDSNVGFGNAGDHNVGVGNAGFNNFGFANTGSNNIGIGLS 2502
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G G N TG +GL N T +GL N TG +GL N TG G+ N G+
Sbjct: 2503 GDGQVGFGALNSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGTGSFGIGNSGNYNTGIG 2562
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N GL N GL N G G N N+GG + NTG + NTG L
Sbjct: 2563 NAGATNTGLFNT-----GLVNTGVGNAG--NYNSGGFNTGSTNTGSFNSGDHNTGYLNSG 2615
Query: 185 NCNTGGLGLRNCNTGGL 201
+ NTG + NTG
Sbjct: 2616 DYNTGLANSGDVNTGAF 2632
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 89/217 (41%), Gaps = 10/217 (4%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
G +G N + +G N +G N G LG N +GL N +GL N
Sbjct: 642 GNIGFGNVGSANVGSFNVGPANMGDYNIGPGNLGNYN-----VGLGNLGDSSVGLANAGD 696
Query: 99 GGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
+G+ N + GL N N G+GL G G N TG +GL N +GL N
Sbjct: 697 LNVGVANAGSNNFGLANTGSNNIGIGLSGDGQVGFGALNSGTGNIGLFNSGADNIGLFNS 756
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 213
TG G+ N G+ N GL N NTG N N+GG + NTG
Sbjct: 757 GTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVSNAGNYNSGGFNAGHTNTGSFNS 816
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
+ NTG L N NTG + + NTG I GA
Sbjct: 817 GDYNTGYLNPGNYNTGLVNSGDVNTGAFISGDYSNGA 853
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 98/257 (38%), Gaps = 29/257 (11%)
Query: 8 ISTKGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR------------NCNTGGLG 52
I G N LG N N GG + N G + N G LG
Sbjct: 2384 IHNLGFANLGIANLGSANIGDLNLGGANFGSANIGSGNIGFGNVGGGNVGSLNLGFGNLG 2443
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG----GLGLRN 105
N G LG N G LG N G G N G G N NTG G+GL
Sbjct: 2444 DHNIGPGNLGDYNIGLGNLGDSNVGFGNAGDHNVGVGNAGFNNFGFANTGSNNIGIGLSG 2503
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G G N TG +GL N T +GL N TG +GL N TG G+ N G+ N
Sbjct: 2504 DGQVGFGALNSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGTGSFGIGNSGNYNTGIGN 2563
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
GL N GL N G G N N+GG + NTG + NTG L +
Sbjct: 2564 AGATNTGLFNT-----GLVNTGVGNAG--NYNSGGFNTGSTNTGSFNSGDHNTGYLNSGD 2616
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + NTG I
Sbjct: 2617 YNTGLANSGDVNTGAFI 2633
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 86/208 (41%), Gaps = 10/208 (4%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G +G N + +G N +G N G LG N +GL N +GL N
Sbjct: 642 GNIGFGNVGSANVGSFNVGPANMGDYNIGPGNLGNYN-----VGLGNLGDSSVGLANAGD 696
Query: 79 GGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
+G+ N + GL N N G+GL G G N TG +GL N +GL N
Sbjct: 697 LNVGVANAGSNNFGLANTGSNNIGIGLSGDGQVGFGALNSGTGNIGLFNSGADNIGLFNS 756
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 193
TG G+ N G+ N GL N NTG N N+GG + NTG
Sbjct: 757 GTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVSNAGNYNSGGFNAGHTNTGSFNS 816
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG L N NTG + + NTG
Sbjct: 817 GDYNTGYLNPGNYNTGLVNSGDVNTGAF 844
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 86/208 (41%), Gaps = 10/208 (4%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
G +G N + +G N +G N G LG N +GL N +GL N
Sbjct: 642 GNIGFGNVGSANVGSFNVGPANMGDYNIGPGNLGNYN-----VGLGNLGDSSVGLANAGD 696
Query: 89 GGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
+G+ N + GL N N G+GL G G N TG +GL N +GL N
Sbjct: 697 LNVGVANAGSNNFGLANTGSNNIGIGLSGDGQVGFGALNSGTGNIGLFNSGADNIGLFNS 756
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 203
TG G+ N G+ N GL N NTG N N+GG + NTG
Sbjct: 757 GTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVSNAGNYNSGGFNAGHTNTGSFNS 816
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
+ NTG L N NTG + + NTG
Sbjct: 817 GDYNTGYLNPGNYNTGLVNSGDVNTGAF 844
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 84/205 (40%), Gaps = 10/205 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N + +G N +G N G LG N +GL N +GL N +
Sbjct: 645 GFGNVGSANVGSFNVGPANMGDYNIGPGNLGNYN-----VGLGNLGDSSVGLANAGDLNV 699
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G+ N + GL N N G+GL G G N TG +GL N +GL N TG
Sbjct: 700 GVANAGSNNFGLANTGSNNIGIGLSGDGQVGFGALNSGTGNIGLFNSGADNIGLFNSGTG 759
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N G+ N GL N NTG N N+GG + NTG +
Sbjct: 760 NFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVSNAGNYNSGGFNAGHTNTGSFNSGDY 819
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG L N NTG + + NTG
Sbjct: 820 NTGYLNPGNYNTGLVNSGDVNTGAF 844
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 76/188 (40%), Gaps = 14/188 (7%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG----GLGL 63
+G N G LG N G LG + G G N G N NTG G+GL
Sbjct: 241 RGSYNIGPGNLGDYNIGLGNLGDSSVGFGNAGDHNVGVANAGFNNFGFANTGSNNIGIGL 300
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
G+G N TG +GL N T +GL N TG G+ N G+ N GL
Sbjct: 301 SGDGQVGIGALNSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGL 360
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
N GL N G G N N+GG + NTG + NTG L N NTG
Sbjct: 361 LNA-----GLVNTGVGNAG--NYNSGGFNAGHTNTGSFNSGDYNTGYLNPGNYNTGLANS 413
Query: 184 RNCNTGGL 191
+ NTG
Sbjct: 414 GDVNTGAF 421
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
S+ GL N +G+ N + GL N N G+GL G G N TG +GL N
Sbjct: 687 SSVGLANAGDLNVGVANAGSNNFGLANTGSNNIGIGLSGDGQVGFGALNSGTGNIGLFNS 746
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 123
+GL N TG G+ N G+ N GL N NTG N N+GG
Sbjct: 747 GADNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLVNTGVSNAGNYNSGGFNA 806
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG + NTG L N NTG + + NTG
Sbjct: 807 GHTNTGSFNSGDYNTGYLNPGNYNTGLVNSGDVNTGAF 844
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--NCNTGGLGLRNC 66
S+ G N +G+ N G N + +G+ G +G+ N TG +GL N
Sbjct: 264 SSVGFGNAGDHNVGVANAGFNNFGFANTGSNNIGIGLSGDGQVGIGALNSGTGNIGLFNS 323
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
T +GL N TG G+ N G+ N GL N GL N G G N
Sbjct: 324 GTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNA-----GLVNTGVGNAG--NY 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
N+GG + NTG + NTG L N NTG + NTG
Sbjct: 377 NSGGFNAGHTNTGSFNSGDYNTGYLNPGNYNTGLANSGDVNTGAF 421
>gi|379706935|ref|YP_005262140.1| putative histidine kinase [Nocardia cyriacigeorgica GUH-2]
gi|374844434|emb|CCF61496.1| putative histidine kinase [Nocardia cyriacigeorgica GUH-2]
Length = 1224
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 57/168 (33%), Gaps = 8/168 (4%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
GL R GL R GL R GGL R GL R GGL R
Sbjct: 807 AGLPQREPGQSGLAPREAGPSGLPQREPAAGGLPQREAGPSGLPQREPAAGGLPQREPAA 866
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
GGL R GGL R GL R GGL R + R GGL R
Sbjct: 867 GGLPQREA--GGLPQRESGASGLPQREPAAGGLPQRESAANDMPQREA--GGLPEREA-- 920
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
GGL R GGL R G R GL R GL R
Sbjct: 921 GGLPQRAA--GGLPQRGPGQNGPAPREGGPSGLPQRGPGQSGLPQRQP 966
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 57/168 (33%), Gaps = 8/168 (4%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
GL R GL R GL R GGL R GL R GGL R
Sbjct: 807 AGLPQREPGQSGLAPREAGPSGLPQREPAAGGLPQREAGPSGLPQREPAAGGLPQREPAA 866
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
GGL R GGL R GL R GGL R + R GGL R
Sbjct: 867 GGLPQRE--AGGLPQRESGASGLPQREPAAGGLPQRESAANDMPQREA--GGLPEREA-- 920
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
GGL R GGL R G R GL R GL R
Sbjct: 921 GGLPQRAA--GGLPQRGPGQNGPAPREGGPSGLPQRGPGQSGLPQRQP 966
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 55/163 (33%), Gaps = 8/163 (4%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R GL R GL R GGL R GL R GGL R GGL
Sbjct: 812 REPGQSGLAPREAGPSGLPQREPAAGGLPQREAGPSGLPQREPAAGGLPQREPAAGGLPQ 871
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R GGL R GL R GGL R + R GGL R GGL
Sbjct: 872 REA--GGLPQRESGASGLPQREPAAGGLPQRESAANDMPQREA--GGLPEREA--GGLPQ 925
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
R GGL R G R GL R GL R
Sbjct: 926 RAA--GGLPQRGPGQNGPAPREGGPSGLPQRGPGQSGLPQRQP 966
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 64/183 (34%), Gaps = 17/183 (9%)
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
R+ NTG L R + G+ +GGL R G + GGL R + GL
Sbjct: 747 RDPNTG-LPQRQPGSNGV---PQPSGGLPQREA---GPAAQPSANGGLPQRGPS--GLPQ 797
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
R G G GL R GL R GL R GGL R GL
Sbjct: 798 RQPGQAGPG------AGLPQREPGQSGLAPREAGPSGLPQREPAAGGLPQREAGPSGLPQ 851
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
R GGL R GGL R GGL R GL R GGL R +
Sbjct: 852 REPAAGGLPQREPAAGGLPQREA--GGLPQRESGASGLPQREPAAGGLPQRESAANDMPQ 909
Query: 234 RNC 236
R
Sbjct: 910 REA 912
>gi|308232427|ref|ZP_07664079.1| hypothetical protein TMAG_03292 [Mycobacterium tuberculosis SUMu001]
gi|308213985|gb|EFO73384.1| hypothetical protein TMAG_03292 [Mycobacterium tuberculosis SUMu001]
Length = 1814
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 775 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 834
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 835 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 889
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 890 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 949
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 950 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 1009
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 1010 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 1039
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 1369 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 1428
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 1429 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 1485
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 1486 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 1545
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 1546 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 1605
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 224 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 282
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 283 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 340
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 341 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 400
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 401 NVNTGAFNSGSFNNGAL 417
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 726 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 785
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 786 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 845
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 846 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 905
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 906 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 965
Query: 236 CNTGGL 241
NTGG
Sbjct: 966 TNTGGF 971
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 716 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 775
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 776 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 835
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 836 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 890
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 891 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 943
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 100/264 (37%), Gaps = 28/264 (10%)
Query: 1 MPPIVAPIS----------TKGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GLR 44
+P I+ P + + G N GG+ G N G G N L G+
Sbjct: 660 VPIIIVPPTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGVL 719
Query: 45 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGG 100
N T G+ N +G GL N GLG +G G L G L
Sbjct: 720 NVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIIN 779
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 160
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 780 LGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGA 839
Query: 161 ------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 212
+GL N + +GL N G +G N T G+GL N G+G N G +G
Sbjct: 840 ALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIG 899
Query: 213 LRNCNTGGLGLRNCNTGGLGLRNC 236
L N TG +G N TG GL N
Sbjct: 900 LFNSGTGNIGFFNSGTGNWGLFNS 923
>gi|289755477|ref|ZP_06514855.1| predicted protein [Mycobacterium tuberculosis EAS054]
gi|289696064|gb|EFD63493.1| predicted protein [Mycobacterium tuberculosis EAS054]
Length = 2079
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 395 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 449
Query: 247 KRGAQEN 253
G + N
Sbjct: 450 PIGLELN 456
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 199 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 255
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 256 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 314
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 315 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 999
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 1586
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 48 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 105
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 1585
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 1585
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 1585
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 844 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 903
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 904 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 956
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 957 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 1431 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 1490
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 1491 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 1543
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 1544 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 1585
>gi|289576081|ref|ZP_06456308.1| predicted protein [Mycobacterium tuberculosis K85]
gi|289540512|gb|EFD45090.1| predicted protein [Mycobacterium tuberculosis K85]
Length = 1475
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 906 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 965
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 966 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1025
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1026 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1085
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 1086 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1129
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 906 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 965
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 966 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1025
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1026 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1085
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 1086 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 1128
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 315 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 374
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 375 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 429
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 430 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 489
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 490 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 529
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 319 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 378
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 379 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 433
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 434 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 493
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 494 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 529
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 284 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 340
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 341 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 400
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 401 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 455
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 456 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 515
Query: 236 CNTGGL 241
NTG
Sbjct: 516 INTGWF 521
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 255 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 314
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 315 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 374
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 375 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 429
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 430 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 483
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 75
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 841 GSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVNP 900
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 901 VTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGN 960
Query: 136 C--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 186
G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 961 SGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNS 1020
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 1021 GAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 1070
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 254 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 313
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 314 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 373
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 374 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 428
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 429 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 463
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 254 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 313
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 314 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 373
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 374 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 428
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 429 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 456
>gi|306790603|ref|ZP_07428925.1| hypothetical protein TMDG_03784, partial [Mycobacterium tuberculosis
SUMu004]
gi|308332990|gb|EFP21841.1| hypothetical protein TMDG_03784 [Mycobacterium tuberculosis SUMu004]
Length = 2110
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 88
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1541 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1600
Query: 89 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 141
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1601 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1660
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 198
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1661 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1720
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G + + NTGG + NTG L N NTG N NTG +
Sbjct: 1721 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1764
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 96/223 (43%), Gaps = 12/223 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL N + G N LG N LG N G LG N G +G+ N
Sbjct: 1541 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 1600
Query: 79 GGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
G GL N N GG GL N G +GL N TG G+GL G+G N G L
Sbjct: 1601 GVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNL 1660
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N G +G N TG GL N + G+ N TG GL N + G+ N NT
Sbjct: 1661 GLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNT 1720
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G + + NTGG + NTG L N NTG N NTG
Sbjct: 1721 GSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAF 1763
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 434 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 493
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 494 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 553
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 554 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 612
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 613 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 666
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 667 SIHMDPIVLVPATTIP 682
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 354 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 413
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 414 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 473
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 474 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 533
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 534 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 592
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 354 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 413
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 414 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 473
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 474 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 533
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 534 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 592
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 950 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 1009
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 1010 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 1064
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 1065 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 1124
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 1125 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 1164
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 436 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 495
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 496 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 555
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 556 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 614
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 615 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 668
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 669 HMDPIVLVPATTIPAQ 684
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 954 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 1013
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 1014 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 1068
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 1069 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 1128
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 1129 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 1164
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 919 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 975
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 976 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 1035
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 1036 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 1090
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 1091 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 1150
Query: 236 CNTGGL 241
NTG
Sbjct: 1151 INTGWF 1156
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 890 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 949
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 950 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 1009
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 1010 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 1064
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 1065 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 1118
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 95/231 (41%), Gaps = 13/231 (5%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 74
G G N T G+ N +G G+ N +T G+G +G G L +GG +
Sbjct: 1475 AGSGFANVGTLHSGVLNLGSGVSGIYNTSTLGVGTPALVSGLGNVGHQLSGLLSGGSAVN 1534
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
+GL N + G N LG N LG N G LG N G +G+
Sbjct: 1535 PVTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVG 1594
Query: 135 NC--NTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 185
N G GL N N GG GL N G +GL N TG G+GL G+G N
Sbjct: 1595 NSGLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLN 1654
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 1655 SGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 1705
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 889 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 948
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 949 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 1008
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 1009 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 1063
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 1064 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 1098
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 889 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 948
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 949 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 1008
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 1009 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 1063
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 1064 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 1091
>gi|432964079|ref|XP_004086844.1| PREDICTED: uncharacterized protein LOC101158182 [Oryzias latipes]
Length = 632
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 108/258 (41%), Gaps = 2/258 (0%)
Query: 4 IVAPISTKGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
IV + KGLR TGGL TGGL TGGL TGGL TGGL
Sbjct: 198 IVGNETVKGLRTGGLRTGGLQTGGLKTGGLRTGGLKTGGLRTGGLQTGGLRTGGLRTGGL 257
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
TGGL TGGL TGGL TGGL TGGL TGGL
Sbjct: 258 KTGGLKTGGLRTGGLKTGGLKTGGLKTGGLKTGGLRTGGLRTGGLKTGGLKTGGLKTGGL 317
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
TGGL TGGL TGGL TGGL TGGL TGGL
Sbjct: 318 KTGGLKTGGLKTGGLKTGGLKTGGLKTGGLRTGGLRTGGLKTGGLKTGGLKTGGLKTGGL 377
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TGGL TGGL TGGL TGGL TGGL TGGL
Sbjct: 378 KTGGLQTGGLKTGGLKTGGLKTGGLQTGGLKTGGLQTGGLQTGGLRTGGLRTGGLRTGGL 437
Query: 242 IVPKSKRGAQENASRSEN 259
+S RG ++ SEN
Sbjct: 438 QTLESSRGCRQLPESSEN 455
>gi|121639274|ref|YP_979498.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991771|ref|YP_002646460.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378773135|ref|YP_005172868.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449065459|ref|YP_007432542.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|121494922|emb|CAL73406.1| PPE Family protein [first part] [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224774886|dbj|BAH27692.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341603299|emb|CCC65978.1| PPE Family protein [first part] [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|356595456|gb|AET20685.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449033967|gb|AGE69394.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 2096
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 395 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 449
Query: 247 KRGAQEN 253
G + N
Sbjct: 450 PIGLELN 456
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 85/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1430 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1488
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1489 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1546
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1547 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1606
Query: 225 NCNTGGLGLRNCNTGGL 241
N NT + N G L
Sbjct: 1607 NVNTAAFNSGSFNNGAL 1623
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 199 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 255
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 256 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 314
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 315 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 999
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 844 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 903
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 904 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 956
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 957 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
>gi|31794530|ref|NP_857023.1| hypothetical protein Mb3380c [Mycobacterium bovis AF2122/97]
gi|31620126|emb|CAD95515.1| PPE FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97]
Length = 2096
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 395 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 449
Query: 247 KRGAQEN 253
G + N
Sbjct: 450 PIGLELN 456
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 85/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1430 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1488
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1489 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1546
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1547 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1606
Query: 225 NCNTGGLGLRNCNTGGL 241
N NT + N G L
Sbjct: 1607 NVNTAAFNSGSFNNGAL 1623
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 199 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 255
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 256 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 314
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 315 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 999
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 844 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 903
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 904 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 956
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 957 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
>gi|307081514|ref|ZP_07490684.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308360801|gb|EFP49652.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 3102
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1926 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 1985
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1986 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2040
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2041 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2100
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2101 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2160
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2161 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2190
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 164 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 219
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 220 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 279
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 280 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 339
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 340 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 394
Query: 247 KRGAQEN 253
G + N
Sbjct: 395 PIGLELN 401
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2520 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2579
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2580 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2636
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2637 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2696
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2697 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2756
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1375 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1433
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1434 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1491
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1492 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1551
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1552 NVNTGAFNSGSFNNGAL 1568
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1877 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1936
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1937 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 1996
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 1997 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2056
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2057 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2116
Query: 236 CNTGGL 241
NTGG
Sbjct: 2117 TNTGGF 2122
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1867 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1926
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1927 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 1986
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1987 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2041
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2042 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2094
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 144 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 200
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 201 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 259
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 260 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 306
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 785 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 844
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 845 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 904
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 905 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 944
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 785 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 844
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 845 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 904
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 905 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 943
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 785 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 844
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 845 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 904
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 905 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 943
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 785 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 844
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 845 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 904
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 905 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 943
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1811 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1869
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1870 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1929
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1930 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 1989
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 1990 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2049
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2050 GLFNSGTGNIGFFNSGTGNWGLFNS 2074
>gi|306795127|ref|ZP_07433429.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu005]
gi|308336610|gb|EFP25461.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
Length = 3090
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1914 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 1973
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1974 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2028
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2029 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2088
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2089 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2148
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2149 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2178
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 152 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 207
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 208 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 267
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 268 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 327
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 328 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 382
Query: 247 KRGAQEN 253
G + N
Sbjct: 383 PIGLELN 389
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2508 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2567
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2568 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2624
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2625 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2684
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2685 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2744
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1363 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1421
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1422 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1479
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1480 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1539
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1540 NVNTGAFNSGSFNNGAL 1556
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1865 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1924
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1925 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 1984
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 1985 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2044
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2045 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2104
Query: 236 CNTGGL 241
NTGG
Sbjct: 2105 TNTGGF 2110
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1855 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1914
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1915 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 1974
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1975 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2029
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2030 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2082
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 132 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 188
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 189 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 247
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 248 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 294
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 773 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 832
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 833 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 892
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 893 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 932
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 773 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 832
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 833 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 892
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 893 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 931
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 773 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 832
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 833 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 892
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 893 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 931
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 773 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 832
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 833 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 892
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 893 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 931
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1799 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1857
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1858 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1917
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1918 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 1977
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 1978 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2037
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2038 GLFNSGTGNIGFFNSGTGNWGLFNS 2062
>gi|306790598|ref|ZP_07428920.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308332993|gb|EFP21844.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length = 3082
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1906 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 1965
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1966 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2020
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2021 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2080
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2081 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2140
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2141 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2170
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 144 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 199
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 200 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 259
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 260 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 319
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 320 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 374
Query: 247 KRGAQEN 253
G + N
Sbjct: 375 PIGLELN 381
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2500 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2559
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2560 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2616
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2617 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2676
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2677 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2736
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1355 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1413
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1414 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1471
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1472 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1531
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1532 NVNTGAFNSGSFNNGAL 1548
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1857 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1916
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1917 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 1976
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 1977 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2036
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2037 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2096
Query: 236 CNTGGL 241
NTGG
Sbjct: 2097 TNTGGF 2102
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1847 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1906
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1907 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 1966
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1967 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2021
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2022 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2074
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 124 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 180
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 181 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 239
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 240 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 286
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 765 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 824
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 825 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 884
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 885 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 924
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 765 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 824
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 825 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 884
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 885 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 923
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 765 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 824
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 825 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 884
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 885 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 923
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 765 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 824
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 825 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 884
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 885 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 923
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1791 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1849
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1850 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1909
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1910 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 1969
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 1970 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2029
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2030 GLFNSGTGNIGFFNSGTGNWGLFNS 2054
>gi|148824553|ref|YP_001289307.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|148723080|gb|ABR07705.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 2472
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1296 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 1355
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1356 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 1410
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 1411 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 1470
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 1471 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 1530
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 1531 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 1560
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 1890 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 1949
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 1950 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2006
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2007 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2066
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2067 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2126
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 745 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 803
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 804 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 861
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 862 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 921
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 922 NVNTGAFNSGSFNNGAL 938
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1247 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1306
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1307 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 1366
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 1367 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 1426
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 1427 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 1486
Query: 236 CNTGGL 241
NTGG
Sbjct: 1487 TNTGGF 1492
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1237 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1296
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1297 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 1356
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1357 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 1411
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 1412 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 1464
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 155 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 214
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 215 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 274
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 275 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 314
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 155 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 214
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 215 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 274
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 275 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 313
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 155 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 214
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 215 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 274
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 275 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 313
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 155 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 214
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 215 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 274
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 275 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 313
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1181 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1239
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1240 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1299
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1300 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 1359
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 1360 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 1419
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 1420 GLFNSGTGNIGFFNSGTGNWGLFNS 1444
>gi|308232428|ref|ZP_07664080.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308213986|gb|EFO73385.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
Length = 1213
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 207 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 262
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 382
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 383 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 437
Query: 247 KRGAQEN 253
G + N
Sbjct: 438 PIGLELN 444
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 106/242 (43%), Gaps = 22/242 (9%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N + G+ N TG GL N N NTG +
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAG-------NFNTGVANPGS 940
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
NTG + + NTGG + NTG N NTG N +TG L N + G L N
Sbjct: 941 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMSGNFSNGILWRGN 1000
Query: 206 CNTGGLGLRNCNTG----GLGLRNCNTGGLG-LRNCNTGGLIVPKSKRGAQENASRSENE 260
GL N G + +TGG+G + +T I+P S +++ R+
Sbjct: 1001 FE----GLFGLNVGITIPEFPIHWTSTGGIGPIIIPDT--TILPPSTWASRDK--RTTAS 1052
Query: 261 PC 262
PC
Sbjct: 1053 PC 1054
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
>gi|422814582|ref|ZP_16862806.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|323717995|gb|EGB27180.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 3111
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1926 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 1985
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1986 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2040
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2041 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2100
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2101 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2160
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2161 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2190
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 164 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 219
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 220 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 279
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 280 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 339
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 340 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 394
Query: 247 KRGAQEN 253
G + N
Sbjct: 395 PIGLELN 401
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2520 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2579
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2580 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2636
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2637 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2696
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2697 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2756
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1375 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1433
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1434 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1491
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1492 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1551
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1552 NVNTGAFNSGSFNNGAL 1568
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1877 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1936
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1937 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 1996
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 1997 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2056
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2057 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2116
Query: 236 CNTGGL 241
NTGG
Sbjct: 2117 TNTGGF 2122
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1867 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1926
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1927 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 1986
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1987 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2041
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2042 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2094
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 144 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 200
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 201 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 259
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 260 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 306
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 785 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 844
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 845 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 904
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 905 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 944
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 785 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 844
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 845 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 904
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 905 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 943
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 785 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 844
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 845 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 904
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 905 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 943
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 785 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 844
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 845 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 904
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 905 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 943
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1811 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1869
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1870 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1929
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1930 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 1989
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 1990 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2049
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2050 GLFNSGTGNIGFFNSGTGNWGLFNS 2074
>gi|289449042|ref|ZP_06438786.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289422000|gb|EFD19201.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1236
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 60 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 119
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 120 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 174
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 175 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 234
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 235 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 294
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 295 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 324
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 654 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 713
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 714 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 770
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 771 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 830
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 831 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 890
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 101/254 (39%), Gaps = 18/254 (7%)
Query: 6 APISTKGLRN---CNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNT 58
AP+S+ +G GL N GLG +G G L G L
Sbjct: 3 APVSSTSFWPPPAVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPI 62
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 63 INLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGL 122
Query: 119 GG-LGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 170
G LG+ N G +GL N G +G N T G+GL N G+G N G
Sbjct: 123 GAALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGN 182
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 227
+GL N TG +G N TG GL N + G+ N TG GL N GL N N
Sbjct: 183 IGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYN 242
Query: 228 TGGLGLRNCNTGGL 241
TG + + NTGG
Sbjct: 243 TGSFNVGDTNTGGF 256
>gi|307086117|ref|ZP_07495230.1| hypothetical protein TMLG_04106 [Mycobacterium tuberculosis SUMu012]
gi|308364416|gb|EFP53267.1| hypothetical protein TMLG_04106 [Mycobacterium tuberculosis SUMu012]
Length = 3064
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1888 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 1947
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1948 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2002
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2003 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2062
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2063 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2122
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2123 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2152
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 126 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 181
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 182 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 241
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 242 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 301
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 302 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 356
Query: 247 KRGAQEN 253
G + N
Sbjct: 357 PIGLELN 363
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2482 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2541
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2542 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2598
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2599 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2658
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2659 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2718
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1337 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1395
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1396 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1453
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1454 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1513
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1514 NVNTGAFNSGSFNNGAL 1530
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1839 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1898
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1899 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 1958
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 1959 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2018
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2019 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2078
Query: 236 CNTGGL 241
NTGG
Sbjct: 2079 TNTGGF 2084
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1829 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1888
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1889 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 1948
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1949 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2003
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2004 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2056
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 106 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 162
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 163 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 221
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 222 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 268
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 747 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 806
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 807 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 866
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 867 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 906
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 747 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 806
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 807 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 866
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 867 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 905
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 747 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 806
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 807 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 866
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 867 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 905
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 747 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 806
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 807 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 866
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 867 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 905
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1773 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1831
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1832 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1891
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1892 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 1951
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 1952 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2011
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2012 GLFNSGTGNIGFFNSGTGNWGLFNS 2036
>gi|306782411|ref|ZP_07420748.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308324928|gb|EFP13779.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 3061
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1885 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 1944
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1945 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 1999
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2000 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2059
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2060 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2119
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2120 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2149
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 123 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 178
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 179 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 238
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 239 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 298
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 299 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 353
Query: 247 KRGAQEN 253
G + N
Sbjct: 354 PIGLELN 360
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2479 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2538
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2539 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2595
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2596 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2655
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2656 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2715
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1334 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1392
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1393 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1450
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1451 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1510
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1511 NVNTGAFNSGSFNNGAL 1527
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1836 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1895
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1896 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 1955
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 1956 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2015
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2016 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2075
Query: 236 CNTGGL 241
NTGG
Sbjct: 2076 TNTGGF 2081
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1826 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1885
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1886 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 1945
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1946 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2000
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2001 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2053
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 103 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 159
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 160 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 218
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 219 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 265
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 744 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 803
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 804 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 863
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 864 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 903
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 744 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 803
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 804 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 863
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 864 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 902
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 744 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 803
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 804 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 863
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 864 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 902
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 744 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 803
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 804 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 863
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 864 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 902
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1770 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1828
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1829 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1888
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1889 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 1948
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 1949 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2008
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2009 GLFNSGTGNIGFFNSGTGNWGLFNS 2033
>gi|308374849|ref|ZP_07437620.2| hypothetical protein TMFG_02918 [Mycobacterium tuberculosis SUMu006]
gi|308340482|gb|EFP29333.1| hypothetical protein TMFG_02918 [Mycobacterium tuberculosis SUMu006]
Length = 3053
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1877 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 1936
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1937 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 1991
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 1992 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2051
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2052 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2111
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2112 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2141
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 115 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 170
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 171 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 230
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 231 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 290
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 291 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 345
Query: 247 KRGAQEN 253
G + N
Sbjct: 346 PIGLELN 352
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2471 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2530
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2531 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2587
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2588 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2647
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2648 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2707
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1326 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1384
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1385 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1442
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1443 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1502
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1503 NVNTGAFNSGSFNNGAL 1519
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1828 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1887
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1888 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 1947
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 1948 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2007
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2008 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2067
Query: 236 CNTGGL 241
NTGG
Sbjct: 2068 TNTGGF 2073
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1818 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1877
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1878 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 1937
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1938 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 1992
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 1993 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2045
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 95 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 151
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 152 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 210
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 211 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 257
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 736 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 795
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 796 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 855
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 856 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 895
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 736 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 795
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 796 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 855
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 856 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 894
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 736 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 795
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 796 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 855
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 856 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 894
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 736 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 795
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 796 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 855
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 856 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 894
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1762 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1820
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1821 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1880
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1881 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 1940
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 1941 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2000
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2001 GLFNSGTGNIGFFNSGTGNWGLFNS 2025
>gi|289747166|ref|ZP_06506544.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289687694|gb|EFD55182.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 3157
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1981 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 2040
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2041 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2095
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2096 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2155
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2156 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2215
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2216 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2245
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 395 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 449
Query: 247 KRGAQEN 253
G + N
Sbjct: 450 PIGLELN 456
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1430 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1488
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1489 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1546
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1547 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1606
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1607 NVNTGAFNSGSFNNGAL 1623
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 97/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2575 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2634
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2635 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2691
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N G+ N GL N
Sbjct: 2692 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGNYNTGIGNSGVASTGLVN 2751
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2752 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2811
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1932 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1991
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1992 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 2051
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 2052 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2111
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2112 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2171
Query: 236 CNTGGL 241
NTGG
Sbjct: 2172 TNTGGF 2177
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1922 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1981
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1982 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 2041
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2042 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2096
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2097 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2149
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 199 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 255
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 256 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 314
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 315 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 999
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1866 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1924
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1925 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1984
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1985 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 2044
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 2045 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2104
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2105 GLFNSGTGNIGFFNSGTGNWGLFNS 2129
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 844 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 903
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 904 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 956
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 957 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
>gi|298526827|ref|ZP_07014236.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
gi|424805913|ref|ZP_18231344.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|298496621|gb|EFI31915.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
gi|326905189|gb|EGE52122.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length = 3157
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1981 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 2040
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2041 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2095
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2096 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2155
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2156 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2215
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2216 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2245
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 395 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 449
Query: 247 KRGAQEN 253
G + N
Sbjct: 450 PIGLELN 456
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2575 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2634
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2635 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2691
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2692 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2751
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2752 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2811
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1430 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1488
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1489 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1546
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1547 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1606
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1607 NVNTGAFNSGSFNNGAL 1623
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1932 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1991
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1992 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 2051
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 2052 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2111
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2112 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2171
Query: 236 CNTGGL 241
NTGG
Sbjct: 2172 TNTGGF 2177
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1922 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1981
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1982 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 2041
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2042 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2096
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2097 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2149
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 199 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 255
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 256 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 314
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 315 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 999
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1866 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1924
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1925 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1984
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1985 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 2044
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 2045 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2104
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2105 GLFNSGTGNIGFFNSGTGNWGLFNS 2129
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 900 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 952
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 953 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 844 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 903
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 904 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 956
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 957 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 998
>gi|385992588|ref|YP_005910886.1| ppe family protein [Mycobacterium tuberculosis CCDC5180]
gi|339299781|gb|AEJ51891.1| ppe family protein [Mycobacterium tuberculosis CCDC5180]
Length = 3145
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1969 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 2028
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2029 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2083
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2084 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2143
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2144 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2203
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2204 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2233
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 207 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 262
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 382
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 383 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 437
Query: 247 KRGAQEN 253
G + N
Sbjct: 438 PIGLELN 444
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2563 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2622
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2623 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2679
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2680 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2739
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2740 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2799
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1418 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1476
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1477 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1534
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1535 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1594
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1595 NVNTGAFNSGSFNNGAL 1611
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1920 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1979
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1980 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 2039
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 2040 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2099
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2100 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2159
Query: 236 CNTGGL 241
NTGG
Sbjct: 2160 TNTGGF 2165
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1910 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1969
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1970 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 2029
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2030 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2084
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2085 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2137
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
+GL N LG N LG N +G G N G N GLGL G
Sbjct: 196 VGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGN 251
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+GL N + GL N G +G N N G+GL N G+G N TG LGL N T
Sbjct: 252 IGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGT 311
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G +G N TG G+ N + G+ N T GL N
Sbjct: 312 GNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 888 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 940
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 941 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 987
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1854 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1912
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1913 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1972
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1973 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 2032
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 2033 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2092
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2093 GLFNSGTGNIGFFNSGTGNWGLFNS 2117
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 888 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 940
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 941 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 986
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 888 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 940
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 941 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 986
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 888 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 940
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 941 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 986
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 832 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 891
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 892 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 944
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 945 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 986
>gi|306786230|ref|ZP_07424552.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308329160|gb|EFP18011.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 3145
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1969 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 2028
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2029 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2083
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2084 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2143
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2144 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2203
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2204 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2233
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 207 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 262
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 382
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 383 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 437
Query: 247 KRGAQEN 253
G + N
Sbjct: 438 PIGLELN 444
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2563 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2622
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2623 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2679
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2680 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2739
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2740 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2799
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1418 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1476
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1477 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1534
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1535 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1594
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1595 NVNTGAFNSGSFNNGAL 1611
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1920 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1979
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1980 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 2039
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 2040 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2099
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2100 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2159
Query: 236 CNTGGL 241
NTGG
Sbjct: 2160 TNTGGF 2165
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1910 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1969
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1970 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 2029
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2030 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2084
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2085 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2137
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 987
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1854 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1912
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1913 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1972
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1973 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 2032
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 2033 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2092
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2093 GLFNSGTGNIGFFNSGTGNWGLFNS 2117
>gi|148663209|ref|YP_001284732.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148507361|gb|ABQ75170.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 3145
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1969 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 2028
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2029 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2083
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2084 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2143
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2144 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2203
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2204 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2233
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 207 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 262
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 382
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 383 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 437
Query: 247 KRGAQEN 253
G + N
Sbjct: 438 PIGLELN 444
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2563 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2622
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2623 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2679
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2680 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2739
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2740 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2799
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1418 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1476
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1477 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1534
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1535 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1594
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1595 NVNTGAFNSGSFNNGAL 1611
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1920 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1979
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1980 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 2039
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 2040 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2099
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2100 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2159
Query: 236 CNTGGL 241
NTGG
Sbjct: 2160 TNTGGF 2165
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1910 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1969
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1970 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 2029
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2030 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2084
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2085 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2137
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 987
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1854 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1912
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1913 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1972
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1973 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 2032
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 2033 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2092
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2093 GLFNSGTGNIGFFNSGTGNWGLFNS 2117
>gi|308377315|ref|ZP_07668484.1| hypothetical protein TMHG_03869 [Mycobacterium tuberculosis
SUMu008]
gi|308348287|gb|EFP37138.1| hypothetical protein TMHG_03869 [Mycobacterium tuberculosis
SUMu008]
Length = 1645
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 126 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 181
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 182 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 241
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 242 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 301
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 302 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 356
Query: 247 KRGAQEN 253
G + N
Sbjct: 357 PIGLELN 363
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1337 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1395
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1396 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1453
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1454 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1513
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1514 NVNTGAFNSGSFNNGAL 1530
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 106 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 162
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 163 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 221
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 222 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 268
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 747 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 806
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 807 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 866
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 867 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 906
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 747 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 806
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 807 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 866
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 867 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 905
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 747 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 806
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 807 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 866
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 867 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 905
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 747 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 806
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 807 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 866
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 867 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 905
>gi|183980667|ref|YP_001848958.1| PPE family protein [Mycobacterium marinum M]
gi|183173993|gb|ACC39103.1| PPE family protein [Mycobacterium marinum M]
Length = 3516
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 105/262 (40%), Gaps = 11/262 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G G N +G +G N + +G N + LG N G LG N G G
Sbjct: 572 NLGSGNFGGTNFGSGNIGSLNLGSANIGSYNIGSASLGSYNVGFGNLGDYNTGFGNAGSY 631
Query: 75 N---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
N NTG NTG G+GL G+G N G GL N T +GL N
Sbjct: 632 NQGLANTGSNNAGFANTGNGNIGIGLTGDGQIGIGALNSGIGNAGLFNSGTDNVGLFNSG 691
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-- 185
+G +G+ N +G GL N GL N T G+ N GL N G N
Sbjct: 692 SGNIGIGNSGSGNTGLLNAGVANWGLENPGTANTGIGNAGQYNTGLHNVGAANTGFYNNG 751
Query: 186 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
NTGG + + NTG + NTG + NTG N NTG N N G +
Sbjct: 752 SYNTGGFNVGSTNTGSFDAGSANTGNFNPGDTNTGSYNPGNVNTGFFDTGNYNNGFFVTS 811
Query: 245 KSKRGAQENAS-RSENEPCLVK 265
++ N S + + P V+
Sbjct: 812 DNQGQIAINLSVTTPHIPIDVQ 833
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 96/232 (41%), Gaps = 10/232 (4%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 77
+G +G N +G G N +G +G N + +G N + LG N G LG N
Sbjct: 565 SGNIGSLNLGSGNFGGTNFGSGNIGSLNLGSANIGSYNIGSASLGSYNVGFGNLGDYNTG 624
Query: 78 TGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
G G N NTG NTG G+GL G+G N G GL N T
Sbjct: 625 FGNAGSYNQGLANTGSNNAGFANTGNGNIGIGLTGDGQIGIGALNSGIGNAGLFNSGTDN 684
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
+GL N +G +G+ N +G GL N GL N T G+ N GL N
Sbjct: 685 VGLFNSGSGNIGIGNSGSGNTGLLNAGVANWGLENPGTANTGIGNAGQYNTGLHNVGAAN 744
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N NTGG + + NTG + NTG + NTG N NTG
Sbjct: 745 TGFYNNGSYNTGGFNVGSTNTGSFDAGSANTGNFNPGDTNTGSYNPGNVNTG 796
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 99/243 (40%), Gaps = 10/243 (4%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 64
I+ G N + +G N +G+ N G LG N N GG L + N G
Sbjct: 3027 IANPGFWNVGSANIGSYNLGNANIGVSNFGFGNLGSANLGSANLGGFNLGSANIGSHNFG 3086
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
NTG L + G +G N + +G N G LG N G G+GL G G
Sbjct: 3087 FANTG-PALSDA-IGNIGFGNTGSYNIGFGNTGNGNLGFANTGDGNIGIGLAGDTMTGFG 3144
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG 179
N +G +GL N T +G N TG G+ N + G+ N T G N NTG
Sbjct: 3145 GWNSGSGNIGLFNSGTNNIGFGNSGTGNWGIGNSGSYNTGIGNTGTTNTGFFNSGMVNTG 3204
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG + NTGG N NTG N NTG N NTG
Sbjct: 3205 IGNAGNYNTGCYNTGDFNTGSFNPGDYNTGGFNPGNYNTGYFNEGNSNTGLANSGNVNTG 3264
Query: 240 GLI 242
I
Sbjct: 3265 AFI 3267
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 99/244 (40%), Gaps = 13/244 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 68
G N G +G N +G +G N +G G N G LG N LG N N
Sbjct: 1963 GSNNAGFGNVGANNFGSGNIGSFNFLSGNHGTYNFGLGNLGDYNVGLANLGDYNVGFGNA 2022
Query: 69 GGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR---NCNTGGLGLRNCNTGGL 121
G L NTG + NTG G+GL N G+ L N TG GL N T
Sbjct: 2023 GSLNQGFANTGDHNIGIGNTGNNNIGIGLTGDNQVGINLAGGLNSGTGNAGLFNSGTNNT 2082
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
G+ N TG G+ N T G+ N T G+ N + GL N TG G+ N
Sbjct: 2083 GIFNSGTGNTGIFNSGTANWGIGNSGTANSGIANSGSTNWGLWNPGTGNTGIANAGDYNT 2142
Query: 182 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
GL N NTG + NTG + NTG N NTG + NTG + NT
Sbjct: 2143 GLYNAGHTNTGLANPTDYNTGFFNTGDYNTGLANAGNYNTGFFNTGDYNTGLANTGDVNT 2202
Query: 239 GGLI 242
G I
Sbjct: 2203 GAFI 2206
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 72/174 (41%), Gaps = 5/174 (2%)
Query: 11 KGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+GL N + G N G G+GL G+G N G GL N T +GL N +
Sbjct: 633 QGLANTGSNNAGFANTGNGNIGIGLTGDGQIGIGALNSGIGNAGLFNSGTDNVGLFNSGS 692
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--- 125
G +G+ N +G GL N GL N T G+ N GL N G N
Sbjct: 693 GNIGIGNSGSGNTGLLNAGVANWGLENPGTANTGIGNAGQYNTGLHNVGAANTGFYNNGS 752
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
NTGG + + NTG + NTG + NTG N NTG N N G
Sbjct: 753 YNTGGFNVGSTNTGSFDAGSANTGNFNPGDTNTGSYNPGNVNTGFFDTGNYNNG 806
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 97/238 (40%), Gaps = 13/238 (5%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N G +G N +G +G N +G G N G LG N LG
Sbjct: 1956 NIGDGNIGSNNAGFGNVGANNFGSGNIGSFNFLSGNHGTYNFGLGNLGDYNVGLANLGDY 2015
Query: 75 NC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR---NCNTGGLGLR 124
N N G L NTG + NTG G+GL N G+ L N TG GL
Sbjct: 2016 NVGFGNAGSLNQGFANTGDHNIGIGNTGNNNIGIGLTGDNQVGINLAGGLNSGTGNAGLF 2075
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N T G+ N TG G+ N T G+ N T G+ N + GL N TG G+
Sbjct: 2076 NSGTNNTGIFNSGTGNTGIFNSGTANWGIGNSGTANSGIANSGSTNWGLWNPGTGNTGIA 2135
Query: 185 NCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N GL N NTG + NTG + NTG N NTG + NTG
Sbjct: 2136 NAGDYNTGLYNAGHTNTGLANPTDYNTGFFNTGDYNTGLANAGNYNTGFFNTGDYNTG 2193
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 101/237 (42%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNT 68
GL N GL N G N +GL N N G+GL G G +
Sbjct: 2552 AGLFNLGDFNTGLANAGNDNQGWSNTGNNNIGLFNTGDNNVGIGLTGDGRVGFGSLSSGA 2611
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
G G N T G+ N TG +G N TG +G+ N TGG+G+ GL+ N
Sbjct: 2612 GNTGFFNSGTSNAGMFNSGTGNVGFFNSGTGNVGIGNMGTGGIGI--------GLQGDNL 2663
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 186
G+G N + +GL N TG +G+ N TG G+ N + G+ N + GL N
Sbjct: 2664 VGIGGLNSGSFNVGLFNSGTGNVGIGNSGTGNWGIGNSGSHNSGIGNTGSYNTGLFNSGS 2723
Query: 187 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG N NTG + NTG + NTG + NTG + N +TG I
Sbjct: 2724 FNTGIANPGNFNTGLFNIGVFNTGIANPGDYNTGFYNTGDYNTGLANIGNFDTGAFI 2780
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 85/209 (40%), Gaps = 10/209 (4%)
Query: 38 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 97
+G +G N +G G N +G +G N + +G N + LG N G LG N
Sbjct: 565 SGNIGSLNLGSGNFGGTNFGSGNIGSLNLGSANIGSYNIGSASLGSYNVGFGNLGDYNTG 624
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 155
G G N GL N + G N G G+GL G+G N G GL N
Sbjct: 625 FGNAGSYNQ-----GLANTGSNNAGFANTGNGNIGIGLTGDGQIGIGALNSGIGNAGLFN 679
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
T +GL N +G +G+ N +G GL N GL N T G+ N GL N
Sbjct: 680 SGTDNVGLFNSGSGNIGIGNSGSGNTGLLNAGVANWGLENPGTANTGIGNAGQYNTGLHN 739
Query: 216 CNTGGLGLRN---CNTGGLGLRNCNTGGL 241
G N NTGG + + NTG
Sbjct: 740 VGAANTGFYNNGSYNTGGFNVGSTNTGSF 768
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 100/246 (40%), Gaps = 18/246 (7%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI G+ N LG N G +G N G +G N +G +G N +G G N
Sbjct: 1943 PIGNLGIAN-----LGNGNIGDGNIGSNNAGFGNVGANNFGSGNIGSFNFLSGNHGTYNF 1997
Query: 67 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTG 119
G LG N LG N N G L NTG + NTG G+GL N
Sbjct: 1998 GLGNLGDYNVGLANLGDYNVGFGNAGSLNQGFANTGDHNIGIGNTGNNNIGIGLTGDNQV 2057
Query: 120 GLGLR---NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G+ L N TG GL N T G+ N TG G+ N T G+ N T G+ N
Sbjct: 2058 GINLAGGLNSGTGNAGLFNSGTNNTGIFNSGTGNTGIFNSGTANWGIGNSGTANSGIANS 2117
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGL 233
+ GL N TG G+ N GL N NTG + NTG + NTG
Sbjct: 2118 GSTNWGLWNPGTGNTGIANAGDYNTGLYNAGHTNTGLANPTDYNTGFFNTGDYNTGLANA 2177
Query: 234 RNCNTG 239
N NTG
Sbjct: 2178 GNYNTG 2183
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 96/237 (40%), Gaps = 12/237 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLGLRNCNTGGLGLRNCNTGGLGLRN 65
G N LG N +G +G N G +G N +G N G LG N
Sbjct: 2465 GFGNVGADNLGSGNIGSGNIGFGNAGAGLTEAFNNIGFGNVGDTNIGFGNTGNGNLGFGN 2524
Query: 66 CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
G G+GL G G N G GL N GL N G N +GL
Sbjct: 2525 TGNGNIGIGLSGDGQIGFGPLNDGVGNAGLFNLGDFNTGLANAGNDNQGWSNTGNNNIGL 2584
Query: 124 RNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
N N G+GL G G + G G N T G+ N TG +G N TG +
Sbjct: 2585 FNTGDNNVGIGLTGDGRVGFGSLSSGAGNTGFFNSGTSNAGMFNSGTGNVGFFNSGTGNV 2644
Query: 182 GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G+ N TG G+GL+ N G+G N + +GL N TG +G+ N TG G+ N
Sbjct: 2645 GIGNMGTGGIGIGLQGDNLVGIGGLNSGSFNVGLFNSGTGNVGIGNSGTGNWGIGNS 2701
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 98/256 (38%), Gaps = 18/256 (7%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 64
+A I +T LGL + +G N LG N LGL N LGL
Sbjct: 1462 LAGIFVDQASGMSTFSLGLADIGQANVGFGNTGDFNLGFANLGDENLGLGNSGFNNLGLA 1521
Query: 65 N--------CNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRNC--NTGGLG 112
N N GG + + N G + N GG GL N +GL N N G+G
Sbjct: 1522 NLGNFNVGSANLGGYNIGSSNLGDYNVGFGNAGGFNQGLANSGNNNIGLFNTGNNNIGIG 1581
Query: 113 LRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---C 166
L N G N TG GL N T G+ N T G+ N G+ N
Sbjct: 1582 LTGDNQQGFNFGGGLNSGTGNTGLFNSGTNNTGIFNSGTNNTGIFNSGNANWGIGNTGVT 1641
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 226
NTG NTG N NTG N NTG + NT GL + NTG L N
Sbjct: 1642 NTGVFNSGQINTGLWNAGNVNTGIGNPGNYNTGSFNTGSFNTAGLNPGDYNTGYLNSGNY 1701
Query: 227 NTGGLGLRNCNTGGLI 242
NTG + NTG I
Sbjct: 1702 NTGFANSGDVNTGAFI 1717
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 71/175 (40%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + I G N + +G N G LG N G G+GL G G N +G
Sbjct: 3092 PALSDAIGNIGFGNTGSYNIGFGNTGNGNLGFANTGDGNIGIGLAGDTMTGFGGWNSGSG 3151
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N T +G N TG G+ N + G+ N T G N NTG N
Sbjct: 3152 NIGLFNSGTNNIGFGNSGTGNWGIGNSGSYNTGIGNTGTTNTGFFNSGMVNTGIGNAGNY 3211
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG + NTG + NTGG N NTG N NTG N NTG
Sbjct: 3212 NTGCYNTGDFNTGSFNPGDYNTGGFNPGNYNTGYFNEGNSNTGLANSGNVNTGAF 3266
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 95/225 (42%), Gaps = 12/225 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLR---N 75
+G N +G N G LG N G G+GL G G N G GL +
Sbjct: 2500 IGFGNVGDTNIGFGNTGNGNLGFGNTGNGNIGIGLSGDGQIGFGPLNDGVGNAGLFNLGD 2559
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGL 133
NT GL N G N +GL N N G+GL G G + G G
Sbjct: 2560 FNT---GLANAGNDNQGWSNTGNNNIGLFNTGDNNVGIGLTGDGRVGFGSLSSGAGNTGF 2616
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 191
N T G+ N TG +G N TG +G+ N TG G+GL+ N G+G N + +
Sbjct: 2617 FNSGTSNAGMFNSGTGNVGFFNSGTGNVGIGNMGTGGIGIGLQGDNLVGIGGLNSGSFNV 2676
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G+ N TG G+ N + G+ N + GL N
Sbjct: 2677 GLFNSGTGNVGIGNSGTGNWGIGNSGSHNSGIGNTGSYNTGLFNS 2721
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 89/226 (39%), Gaps = 15/226 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 69
+ N G LG N +G +G N + +G N G +G N +G +G N N G
Sbjct: 2431 IFNAGLGDLGQLNLGSGNVGDFNVGSANIGSFNVGFGNVGADNLGSGNIGSGNIGFGNAG 2490
Query: 70 G--------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 119
+G N +G N G LG N G G+GL G G N G
Sbjct: 2491 AGLTEAFNNIGFGNVGDTNIGFGNTGNGNLGFGNTGNGNIGIGLSGDGQIGFGPLNDGVG 2550
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 177
GL N GL N G N +GL N N G+GL G G +
Sbjct: 2551 NAGLFNLGDFNTGLANAGNDNQGWSNTGNNNIGLFNTGDNNVGIGLTGDGRVGFGSLSSG 2610
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
G G N T G+ N TG +G N TG +G+ N TGG+G+
Sbjct: 2611 AGNTGFFNSGTSNAGMFNSGTGNVGFFNSGTGNVGIGNMGTGGIGI 2656
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 117/287 (40%), Gaps = 29/287 (10%)
Query: 4 IVAPISTKGLRNCNTGGLG-LRNCN-------TGGLGLRNCNTGGLGLRNCNTGGLGLRN 55
+ AP + GL N T G LR+ N LG N +G +G N + +G N
Sbjct: 993 LAAPANLSGLFNVGTDLAGVLRDANGTILNLGLADLGHLNVGSGNVGDFNVGSANIGSAN 1052
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT-GGLGLRNCNTGGLGLRNCNTGGLGLR 114
G +G N +G +G N G G R + +G N +G N G G
Sbjct: 1053 FGFGNVGSDNLGSGNIGSGNIGFGNAGARLTDAFNNIGFGNTGDNNIGFGNTGNGNFGFG 1112
Query: 115 NCNTGGLGL-------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
N G +G+ R N G GL N +G +GL N T +G+ N TG G+ N
Sbjct: 1113 NTGNGNIGIGLTGAGQRGVNFAG-GL-NSGSGNIGLFNSGTNNVGIGNSGTGNWGIGNSG 1170
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
+ G N + GL N NTG + + NTG + NTG + NTG
Sbjct: 1171 SLNTGFGNAGSTNTGLFNTGMVNTGIANVGDYNTGWFNTGDVNTGAANRGDYNTGWYNTG 1230
Query: 225 NCNTGGLGLRNCNTGGLIVPK-----SKRGAQE---NASRSENEPCL 263
N +TG N +TG LI + RG Q+ +AS + P +
Sbjct: 1231 NYSTGFANAGNIDTGLLISGDMGNGFAWRGDQQGQVSASYVIHVPEI 1277
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 87/221 (39%), Gaps = 17/221 (7%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG----GLGL 63
G N G LG N LG N N G L NTG + NTG G+GL
Sbjct: 1992 HGTYNFGLGNLGDYNVGLANLGDYNVGFGNAGSLNQGFANTGDHNIGIGNTGNNNIGIGL 2051
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
N G+ L GGL TG GL N T G+ N TG G+ N T G+
Sbjct: 2052 TGDNQVGINLA----GGLNSG---TGNAGLFNSGTNNTGIFNSGTGNTGIFNSGTANWGI 2104
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 180
N T G+ N + GL N TG G+ N GL N NTG + NTG
Sbjct: 2105 GNSGTANSGIANSGSTNWGLWNPGTGNTGIANAGDYNTGLYNAGHTNTGLANPTDYNTGF 2164
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG N NTG + NTG + NTG
Sbjct: 2165 FNTGDYNTGLANAGNYNTGFFNTGDYNTGLANTGDVNTGAF 2205
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 100/247 (40%), Gaps = 22/247 (8%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
P + + T LG N +G RN G +G N +G LG N +G N
Sbjct: 167 PFPLQAAGSVVTANLGFAN-----VGFRNFGNGNVGDYNLGSGNLGSEN-----VGSSNI 216
Query: 67 NTGGLGLRNCNTG------GLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNT 118
+G +G N +G N + +G N +G N N G+GL
Sbjct: 217 GSGNIGFGNSGPALTAALNNIGFGNTGSNNIGFGNTGNNNIGFGNTGDNNRGIGLTGTGQ 276
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-NTGGLGLRNCNTGGLGLRNCN 177
GLG N +G +GL N TG G+ N TG G+ N N+ G+ N G N
Sbjct: 277 FGLGGLNSGSGNIGLFNSGTGNFGIGNSGTGNWGIGNSGNSYNTGIGNSGDANTGFFNAG 336
Query: 178 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
G+ N NTGG + NTGG + NTG L + NTG N NTG L
Sbjct: 337 VANTGIGNVGSYNTGGFNPGDANTGGFNTGSYNTGYLNRGDYNTGVANFGNVNTGALNTG 396
Query: 235 NCNTGGL 241
+ N G L
Sbjct: 397 DYNNGFL 403
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 70/158 (44%), Gaps = 15/158 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNC 56
S G+ N TG +G N TG +G+ N TGG+G+ N + +GL N
Sbjct: 2622 SNAGMFNSGTGNVGFFNSGTGNVGIGNMGTGGIGIGLQGDNLVGIGGLNSGSFNVGLFNS 2681
Query: 57 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 113
TG +G+ N TG G+ N + G+ N + GL N NTG N NTG +
Sbjct: 2682 GTGNVGIGNSGTGNWGIGNSGSHNSGIGNTGSYNTGLFNSGSFNTGIANPGNFNTGLFNI 2741
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
NTG + NTG + NTG + N +TG
Sbjct: 2742 GVFNTGIANPGDYNTGFYNTGDYNTGLANIGNFDTGAF 2779
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTG 59
P + A ++ G N + +G N +G N N G+GL GLG N +G
Sbjct: 228 PALTAALNNIGFGNTGSNNIGFGNTGNNNIGFGNTGDNNRGIGLTGTGQFGLGGLNSGSG 287
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNC-NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 116
+GL N TG G+ N TG G+ N N+ G+ N G N G+ N
Sbjct: 288 NIGLFNSGTGNFGIGNSGTGNWGIGNSGNSYNTGIGNSGDANTGFFNAGVANTGIGNVGS 347
Query: 117 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTGG + NTG L + NTG N NTG L + N G L
Sbjct: 348 YNTGGFNPGDANTGGFNTGSYNTGYLNRGDYNTGVANFGNVNTGALNTGDYNNGFL 403
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 104/276 (37%), Gaps = 28/276 (10%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT-GG 70
G N +G +G N + +G N G +G N +G +G N G G R +
Sbjct: 1029 GHLNVGSGNVGDFNVGSANIGSANFGFGNVGSDNLGSGNIGSGNIGFGNAGARLTDAFNN 1088
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-------RNCNTGGLGLRNCNTGGLGL 123
+G N +G N G G N G +G+ R N G GL N +G +GL
Sbjct: 1089 IGFGNTGDNNIGFGNTGNGNFGFGNTGNGNIGIGLTGAGQRGVNFAG-GL-NSGSGNIGL 1146
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGG 180
N T +G+ N TG G+ N + G N + GL N NTG + + NTG
Sbjct: 1147 FNSGTNNVGIGNSGTGNWGIGNSGSLNTGFGNAGSTNTGLFNTGMVNTGIANVGDYNTGW 1206
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---------GLGLRNCNTGGL 231
+ NTG + NTG N +TG N +TG G R G +
Sbjct: 1207 FNTGDVNTGAANRGDYNTGWYNTGNYSTGFANAGNIDTGLLISGDMGNGFAWRGDQQGQV 1266
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIK 267
+ ++ + A +AS N P
Sbjct: 1267 ------SASYVIHVPEIPAHVDASAPINIPLTANFT 1296
>gi|340628330|ref|YP_004746782.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340006520|emb|CCC45704.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length = 3735
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 103/247 (41%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFANS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNVGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTG N
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGDFNPGNV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 395 NTGWLNTGNTNTGVANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 449
Query: 247 KRGAQEN 253
G + N
Sbjct: 450 PIGLELN 456
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 87/205 (42%), Gaps = 9/205 (4%)
Query: 42 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 199 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFANS---GL 255
Query: 102 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 159
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 256 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 314
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNC 216
LGL N TG +G N TG G+ N + G+ N T GL N NTG + +
Sbjct: 315 NLGLFNSGTGNVGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSY 374
Query: 217 NTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG N NTG N NTG L
Sbjct: 375 NTGSFNAGNTNTGDFNPGNVNTGWL 399
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 94/222 (42%), Gaps = 11/222 (4%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
+GL + LGL N LG N LGL N G +G N G +G N G
Sbjct: 2573 VGLADVGNYNLGLGNVGDLNLGAANIGDLNLGLGNVGNGNVGFGNIGHGNVGFANSGLGA 2632
Query: 81 L------GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 132
L GL N + +GL N G +G N T G+GL N G G N G LG
Sbjct: 2633 LPGIGNIGLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLG 2692
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 189
L N TG +G N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 2693 LFNSGTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNAGGFNTGLANAGSYNTG 2752
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
+ NTG + NTG N NTG N +TG L
Sbjct: 2753 SFNAGDTNTGDFNPGSINTGWFNTGNSNTGIANAGNVDTGAL 2794
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 85/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 2017 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 2075
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 2076 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 2133
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG + N NTGG N NTG + NTG
Sbjct: 2134 TGSTGLFNAGSFNTGLANAGSYNTGSVNAGNTNTGGFNPGNVNTGWFNAGHTNTGLFNTG 2193
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 2194 NVNTGAFNSGSFNNGAL 2210
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 89/210 (42%), Gaps = 11/210 (5%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
+GL + LGL N LG N LGL N G +G N G +G N G
Sbjct: 2573 VGLADVGNYNLGLGNVGDLNLGAANIGDLNLGLGNVGNGNVGFGNIGHGNVGFANSGLGA 2632
Query: 101 L-GLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 152
L G+ N G +GL N G +G N T G+GL N G G N G LG
Sbjct: 2633 LPGIGNIGLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLG 2692
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 209
L N TG +G N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 2693 LFNSGTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNAGGFNTGLANAGSYNTG 2752
Query: 210 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+ NTG + NTG N NTG
Sbjct: 2753 SFNAGDTNTGDFNPGSINTGWFNTGNSNTG 2782
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 87/226 (38%), Gaps = 12/226 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G N LG N LG N G LG N G N
Sbjct: 3163 IVNIGLANVGNHNAGFGNVGEFNLGAANIGELNLGFGNIGGGNLGFGNIGNANFGFGNSG 3222
Query: 68 TGG-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 118
+G N + GL N G +GL N T G+GL N G+G N T
Sbjct: 3223 LAAGLAGLGNIGFANAGSNNFGLANMGIGNVGLANTGTNNLGIGLTGDNQTGIGGLNSGT 3282
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 175
G +GL N TG +G N TG GL N + G+ N GL N NTG +
Sbjct: 3283 GNVGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNSGVASTGLVNAGGFNTGIANAGH 3342
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG N NTG + NTG N NTG N NTG L
Sbjct: 3343 HNTGSFNAGNTNTGDGNPGSINTGWFNTGNANTGVANAGNVNTGAL 3388
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 96/233 (41%), Gaps = 12/233 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL + + +G N LG N +GL N +G +G N GL N GL
Sbjct: 777 GLADVGSVNVGFGNVGNVNLGAANIGDLNVGLGNVGSGNVGFGNIGDANFGLGNA---GL 833
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 129
G +GL N +G +G N G +G N T G GL N G+G N G
Sbjct: 834 AAGLAGVGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGFGLTGDNQTGIGGLNSGAG 893
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
+GL N TG +GL N TG GL N+GG N G N G N NTG
Sbjct: 894 NIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTG 946
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG + + NTGG + NTG N NTG NTG I
Sbjct: 947 VANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 999
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 87/221 (39%), Gaps = 17/221 (7%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--- 90
N G +G N +G N LG N G LG N G N
Sbjct: 3174 HNAGFGNVGEFNLGAANIGELN-----LGFGNIGGGNLGFGNIGNANFGFGNSGLAAGLA 3228
Query: 91 ----LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLR 144
+G N + GL N G +GL N T G+GL N G+G N TG +GL
Sbjct: 3229 GLGNIGFANAGSNNFGLANMGIGNVGLANTGTNNLGIGLTGDNQTGIGGLNSGTGNVGLF 3288
Query: 145 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGL 201
N TG +G N TG GL N + G+ N GL N NTG + NTG
Sbjct: 3289 NSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNSGVASTGLVNAGGFNTGIANAGHHNTGSF 3348
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG N NTG N NTG LI
Sbjct: 3349 NAGNTNTGDGNPGSINTGWFNTGNANTGVANAGNVNTGALI 3389
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + +GL N G +G N T G+GL N G G N G LGL N TG
Sbjct: 2640 GLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNSGTG 2699
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 2700 NVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNAGGFNTGLANAGSYNTGSFNAGDT 2759
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTG + NTG N NTG N +TG L
Sbjct: 2760 NTGDFNPGSINTGWFNTGNSNTGIANAGNVDTGAL 2794
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 94/232 (40%), Gaps = 10/232 (4%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N + GLG +G G L G L
Sbjct: 2509 SGVLNAGTLHSGVLNVGSGISGLYNTSIVGLGTPALVSGLGNVGQQLSGVLASGTVLNQS 2568
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + LGL N LG N LGL N G +G N G +G N
Sbjct: 2569 LILNVGLADVGNYNLGLGNVGDLNLGAANIGDLNLGLGNVGNGNVGFGNIGHGNVGFANS 2628
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L G +GL N + +GL N G +G N T G+GL N G G
Sbjct: 2629 GLGAL----PGIGNIGLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGL 2684
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G LGL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2685 NSGAGNLGLFNSGTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNA 2736
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 72/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGFGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGTVNTGAFI 1586
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 71/166 (42%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGFGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGTVNTGAF 1585
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 71/166 (42%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGFGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGTVNTGAF 1585
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 71/166 (42%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G GL N G+G N G +GL N
Sbjct: 1427 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGFGLTGDNQTGIGGLNSGAGNIGLFN 1486
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 1487 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 1539
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 1540 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGTVNTGAF 1585
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 102/265 (38%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNT-----GGLGL 53
+P I+ P T G N T G N GG+ G N G G N G G+
Sbjct: 2453 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHSAVLGAGSGV 2511
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGG--------- 100
N T G+ N +G GL N + GLG +G G L G
Sbjct: 2512 LNAGTLHSGVLNVGSGISGLYNTSIVGLGTPALVSGLGNVGQQLSGVLASGTVLNQSLIL 2571
Query: 101 -LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
+GL + LGL N LG N LGL N G +G N G +G N G
Sbjct: 2572 NVGLADVGNYNLGLGNVGDLNLGAANIGDLNLGLGNVGNGNVGFGNIGHGNVGFANSGLG 2631
Query: 160 GL------GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
L GL N + +GL N G +G N T G+GL N G G N G L
Sbjct: 2632 ALPGIGNIGLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNL 2691
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2692 GLFNSGTGNVGFFNSGTGNWGLFNS 2716
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 69/162 (42%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G GL N G+G N G +GL N TG
Sbjct: 1431 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGFGLTGDNQTGIGGLNSGAGNIGLFNSGTG 1490
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 1491 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 1543
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 1544 SFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGTVNTGAF 1585
>gi|306969456|ref|ZP_07482117.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308353011|gb|EFP41862.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
Length = 3145
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 207 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 262
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 382
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 383 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 437
Query: 247 KRGAQEN 253
G + N
Sbjct: 438 PIGLELN 444
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2563 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2622
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2623 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2679
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2680 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2739
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2740 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2799
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1418 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1476
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1477 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1534
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1535 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1594
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1595 NVNTGAFNSGSFNNGAL 1611
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1969 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 2028
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2029 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2083
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2084 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNGGTGSTGLFNAGGFTTG 2143
Query: 183 LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+ N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2144 VANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2203
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2204 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2233
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 987
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 86/213 (40%), Gaps = 12/213 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1910 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1969
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1970 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 2029
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2030 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2084
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
N G +GL N TG +G N TG GL N
Sbjct: 2085 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNS 2117
>gi|253800392|ref|YP_003033393.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|297636006|ref|ZP_06953786.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297733004|ref|ZP_06962122.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|313660336|ref|ZP_07817216.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|375297620|ref|YP_005101887.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|386000141|ref|YP_005918440.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|392433831|ref|YP_006474875.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253321895|gb|ACT26498.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328460125|gb|AEB05548.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|344221188|gb|AEN01819.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|392055240|gb|AFM50798.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 3157
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1981 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 2040
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2041 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2095
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2096 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2155
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2156 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2215
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2216 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2245
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 395 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 449
Query: 247 KRGAQEN 253
G + N
Sbjct: 450 PIGLELN 456
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2575 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2634
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2635 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2691
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2692 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2751
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2752 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2811
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1430 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1488
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1489 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1546
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1547 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1606
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1607 NVNTGAFNSGSFNNGAL 1623
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1932 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1991
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1992 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 2051
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 2052 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2111
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2112 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2171
Query: 236 CNTGGL 241
NTGG
Sbjct: 2172 TNTGGF 2177
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1922 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1981
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1982 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 2041
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2042 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2096
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2097 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2149
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 199 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 255
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 256 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 314
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 315 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 999
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 998
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 998
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 998
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1866 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1924
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1925 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1984
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1985 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 2044
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 2045 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2104
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2105 GLFNSGTGNIGFFNSGTGNWGLFNS 2129
>gi|57117095|ref|YP_177963.1| PPE family protein PPE55 [Mycobacterium tuberculosis H37Rv]
gi|397675294|ref|YP_006516829.1| hypothetical protein RVBD_3347c [Mycobacterium tuberculosis H37Rv]
gi|7478724|pir||B70969 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
gi|395140199|gb|AFN51358.1| hypothetical protein RVBD_3347c [Mycobacterium tuberculosis H37Rv]
gi|444896902|emb|CCP46168.1| PPE family protein PPE55 [Mycobacterium tuberculosis H37Rv]
Length = 3157
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1981 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 2040
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2041 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2095
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2096 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 2155
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2156 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2215
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2216 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2245
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 395 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 449
Query: 247 KRGAQEN 253
G + N
Sbjct: 450 PIGLELN 456
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2575 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2634
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2635 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2691
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2692 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2751
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2752 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2811
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1430 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1488
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1489 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1546
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1547 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1606
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1607 NVNTGAFNSGSFNNGAL 1623
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1932 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1991
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1992 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 2051
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 2052 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 2111
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 2112 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 2171
Query: 236 CNTGGL 241
NTGG
Sbjct: 2172 TNTGGF 2177
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1922 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1981
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1982 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 2041
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2042 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2096
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 2097 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2149
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 199 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 255
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 256 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 314
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 315 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 999
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 998
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 998
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 840 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 899
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 900 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 959
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 960 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 998
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1866 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1924
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1925 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1984
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1985 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 2044
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 2045 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 2104
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 2105 GLFNSGTGNIGFFNSGTGNWGLFNS 2129
>gi|289759496|ref|ZP_06518874.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289715060|gb|EFD79072.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 1841
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 72 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 127
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 128 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 187
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 188 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 247
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 248 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 302
Query: 247 KRGAQEN 253
G + N
Sbjct: 303 PIGLELN 309
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1283 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1341
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1342 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1399
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1400 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1459
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1460 NVNTGAFNSGSFNNGAL 1476
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 52 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 108
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 109 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 167
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 168 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 214
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 693 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 752
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 753 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 805
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 806 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 852
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 693 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 752
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 753 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 805
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 806 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 851
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 693 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 752
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 753 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 805
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 806 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 851
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 693 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 752
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 753 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 805
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 806 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 851
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 697 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 756
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 757 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 809
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 810 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 851
>gi|306809351|ref|ZP_07446019.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308344353|gb|EFP33204.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
Length = 3145
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 207 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 262
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 382
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 383 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 437
Query: 247 KRGAQEN 253
G + N
Sbjct: 438 PIGLELN 444
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2563 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2622
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2623 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2679
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2680 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2739
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2740 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2799
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1418 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1476
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1477 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSG 1534
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1535 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1594
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1595 NVNTGAFNSGSFNNGAL 1611
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1969 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 2028
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2029 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 2083
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2084 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNGGTGSTGLFNAGGFTTG 2143
Query: 183 LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+ N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 2144 VANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 2203
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 2204 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 2233
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 202
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ + NTGG + NTG N NTG N +TG L+
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALM 987
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 132
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 182
TG +GL N TG GL N + G+ N TG GL N NTG + NTG
Sbjct: 888 SGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPGSYNTGSFN 947
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + NTGG + NTG N NTG N +TG L
Sbjct: 948 VGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGAL 986
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 86/213 (40%), Gaps = 12/213 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1910 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1969
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1970 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 2029
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 2030 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 2084
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
N G +GL N TG +G N TG GL N
Sbjct: 2085 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNS 2117
>gi|289444997|ref|ZP_06434741.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T46]
gi|289417916|gb|EFD15156.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T46]
Length = 780
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 219 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 274
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 275 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 334
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 335 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 394
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 395 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 449
Query: 247 KRGAQEN 253
G + N
Sbjct: 450 PIGLELN 456
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 199 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 255
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 256 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 314
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 315 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
>gi|289576077|ref|ZP_06456304.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289540508|gb|EFD45086.1| PPE family protein [Mycobacterium tuberculosis K85]
Length = 2073
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 207 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 262
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 382
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 383 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 437
Query: 247 KRGAQEN 253
G + N
Sbjct: 438 PIGLELN 444
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +GL N + +G N G +G N T G+GL N G G N G LGL N
Sbjct: 1444 GNIGLGNAGSNNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1503
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 193
TG +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1504 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNA 1563
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTGG N NTG + NTGG N NTG + N G L
Sbjct: 1564 GNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGAL 1611
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 888 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 940
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 941 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 987
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 888 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 940
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 941 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 986
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 888 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 940
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 941 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 986
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 828 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 887
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 888 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 940
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 941 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 986
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 832 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 891
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 892 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 944
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 945 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 986
>gi|289571581|ref|ZP_06451808.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T17]
gi|289545335|gb|EFD48983.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T17]
Length = 627
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 207 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 262
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 382
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 383 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 437
Query: 247 KRGAQEN 253
G + N
Sbjct: 438 PIGLELN 444
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
>gi|270159053|ref|ZP_06187709.1| IcmE (DotG) [Legionella longbeachae D-4968]
gi|289166111|ref|YP_003456249.1| IcmE/DotG protein [Legionella longbeachae NSW150]
gi|269987392|gb|EEZ93647.1| IcmE (DotG) [Legionella longbeachae D-4968]
gi|288859284|emb|CBJ13218.1| putative IcmE/DotG protein [Legionella longbeachae NSW150]
Length = 1525
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/230 (16%), Positives = 56/230 (24%), Gaps = 3/230 (1%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ K LR L+N G ++ G + G + G ++
Sbjct: 1025 YTAKELREAGFTAAELKNA---GFTAKDLKDAGFSAKELKDAGFSAKELKDAGFSAKDLK 1081
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G + G + G + G G + G +
Sbjct: 1082 DAGFSATDLKNAGFSAKELKDAGYSAKELRDAGFSAAQLKAAGFSAKELKDAGYSAKELK 1141
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G ++ G G G ++ G GL
Sbjct: 1142 DAGFSAAELKDAGFSAKDLKDAGFSATQLRAAGFGAKDLVDAGYSADELKNAGLSASQIQ 1201
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+ G + GLG N G L T G G T G N N
Sbjct: 1202 SAGYNPMSSEVAGLGNPNLQQGAFNLNGIPTVGQGAAAETTQGAAANNSN 1251
>gi|148824554|ref|YP_001289308.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|148723081|gb|ABR07706.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 647
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 207 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 262
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 382
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 383 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 437
Query: 247 KRGAQEN 253
G + N
Sbjct: 438 PIGLELN 444
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
>gi|308377314|ref|ZP_07668483.1| hypothetical protein TMHG_03868 [Mycobacterium tuberculosis
SUMu008]
gi|308348286|gb|EFP37137.1| hypothetical protein TMHG_03868 [Mycobacterium tuberculosis
SUMu008]
Length = 1419
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 243 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 302
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 303 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 357
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 358 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 417
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 418 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 477
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 478 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 507
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 837 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 896
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 897 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 953
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 954 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 1013
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 1014 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 1073
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 194 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 253
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 254 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 313
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 314 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 373
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 374 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 433
Query: 236 CNTGGL 241
NTGG
Sbjct: 434 TNTGGF 439
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 184 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 243
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 244 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 303
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 304 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 358
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 359 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 411
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 128 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 186
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 187 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 246
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 247 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 306
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 307 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 366
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 367 GLFNSGTGNIGFFNSGTGNWGLFNS 391
>gi|385996220|ref|YP_005914518.1| ppe family protein [Mycobacterium tuberculosis CCDC5079]
gi|339296174|gb|AEJ48285.1| ppe family protein [Mycobacterium tuberculosis CCDC5079]
Length = 2730
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 117/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 1554 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 1613
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1614 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 1668
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 1669 GLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 1728
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 1729 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 1788
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 1789 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 1818
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 2148 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 2207
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 2208 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 2264
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 2265 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 2324
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 2325 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2384
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 85/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 1003 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 1061
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+G N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 1062 --GIGPTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 1119
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 1120 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 1179
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 1180 NVNTGAFNSGSFNNGAL 1196
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 1505 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 1564
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 1565 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 1624
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G +GL N T
Sbjct: 1625 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGT 1684
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 1685 GNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 1744
Query: 236 CNTGGL 241
NTGG
Sbjct: 1745 TNTGGF 1750
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 95/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 1495 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 1554
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 1555 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 1614
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 1615 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 1669
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG GL N + G+ N TG GL N
Sbjct: 1670 LNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 1722
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 413 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 472
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 473 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 525
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 526 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 572
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 99/265 (37%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 1439 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 1497
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 1498 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 1557
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 1558 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 1617
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G +
Sbjct: 1618 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNI 1677
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N TG +G N TG GL N
Sbjct: 1678 GLFNSGTGNIGFFNSGTGNWGLFNS 1702
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 413 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 472
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 473 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 525
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 526 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 571
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 413 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 472
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 473 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 525
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 526 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 571
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 413 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 472
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 473 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 525
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 526 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 571
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 417 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 476
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 477 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 529
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 530 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 571
>gi|289752050|ref|ZP_06511428.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T92]
gi|289692637|gb|EFD60066.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T92]
Length = 647
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 104/247 (42%), Gaps = 14/247 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N +G G N G N GLGL G +GL N +
Sbjct: 207 GAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNY 262
Query: 72 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N + G+ N T GL N NTG + + NTG N NTGG N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNV 382
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
NTG L N NTG N NTG N + G L R G GL +GG +P
Sbjct: 383 NTGWLNTGNTNTGIANSGNVNTGAFISGNFSNGVL-WRGDYEGLWGL----SGGSTIPAI 437
Query: 247 KRGAQEN 253
G + N
Sbjct: 438 PIGLELN 444
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 189
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
>gi|289571579|ref|ZP_06451806.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289545333|gb|EFD48981.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 1703
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 116/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 527 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 586
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 587 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 641
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G LGL N G +G N TG GL N + G+ N TG GL N G
Sbjct: 642 GLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 701
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 702 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 761
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 762 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 791
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 1121 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 1180
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 1181 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 1237
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 1238 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 1297
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 1298 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 1357
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 108/265 (40%), Gaps = 21/265 (7%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +GL N + +G N G +G N T G+GL N G G N G LGL N
Sbjct: 2 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 61
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 133
TG +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 62 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNA 121
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N NTGG N NTG + NTGG N NTG + N G L + + G +G
Sbjct: 122 GNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHH-GLVGF 180
Query: 194 -RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN----CNTGGL-IVPKSK 247
+ G L + N N G + + + G+ L + N G I P
Sbjct: 181 SYSIEITGSTLVDIN------ETLNLGPVHIDQIDIPGMSLFDIHELVNIGPFRIEPIDV 234
Query: 248 RGAQENASRSENEPCLVKIKFTPNL 272
+ + P +V F P++
Sbjct: 235 PAVVLDIHETMVIPPIV---FLPSM 256
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + +G N G +G N T G+GL N G G N G LGL N TG
Sbjct: 5 GLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNSGTG 64
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N + GL N NTG L N
Sbjct: 65 NIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNT 124
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG N NTG + NTGG N NTG + N G L
Sbjct: 125 NTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGAL 169
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 98/246 (39%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 478 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 537
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 538 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 597
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G LGL N
Sbjct: 598 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNSGA 657
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 658 GNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 717
Query: 236 CNTGGL 241
NTGG
Sbjct: 718 TNTGGF 723
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 94/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 468 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 527
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 528 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 587
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 588 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 642
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 643 LNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 695
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 98/265 (36%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 412 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 470
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 471 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 530
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 531 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 590
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G L
Sbjct: 591 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNL 650
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N G +G N TG GL N
Sbjct: 651 GLFNSGAGNVGFFNSGTGNWGLFNS 675
>gi|449065464|ref|YP_007432547.1| PPE family protein [second part] [Mycobacterium bovis BCG str. Korea
1168P]
gi|449033972|gb|AGE69399.1| PPE family protein [second part] [Mycobacterium bovis BCG str. Korea
1168P]
Length = 2044
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1586 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 1645
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 1646 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 1705
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 1706 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 1764
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 1765 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 1818
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 1819 SIHMDPIVLVPATTIP 1834
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGL- 73
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1506 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1565
Query: 74 ----------------RNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1566 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1625
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1626 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 1685
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 1686 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 1744
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGL- 83
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1506 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1565
Query: 84 ----------------RNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1566 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1625
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1626 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 1685
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 1686 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 1744
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1588 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 1647
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 1648 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 1707
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 1708 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 1766
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 1767 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 1820
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 1821 HMDPIVLVPATTIPAQ 1836
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 306 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 365
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 366 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 420
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 421 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGDVGFFNSGTGNFGIGNSGRFNTGIGNS 480
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 481 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 536
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 908 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 967
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 968 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1024
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1025 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1084
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1085 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1123
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 910 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 964
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 965 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1021
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1022 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1081
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1082 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1115
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 978 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1037
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1038 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1097
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1098 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1156
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1157 IPQFPIRITTTGGIG 1171
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 291 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 347
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 348 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 403
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 404 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGDVGFFNSGT 462
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 463 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 522
Query: 236 CNTGGL 241
NTG
Sbjct: 523 INTGWF 528
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 981 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1040
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1041 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1100
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1101 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1159
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1160 FPIRITTTGGIG 1171
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 349 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 408
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 409 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGDVGFFNSGTGNFGIG 468
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 469 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 528
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 529 NTGHANT---GLANAGTFGTG 546
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 201 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 259
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 260 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 319
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 320 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 379
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 380 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 439
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 440 SGIGNIGLFNSGTGDVGFFNSGTG 463
>gi|289752058|ref|ZP_06511436.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289692645|gb|EFD60074.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 2714
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1915 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 1974
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 1975 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2034
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2035 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2093
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2094 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2147
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2148 SIHMDPIVLVPATTIP 2163
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1835 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1894
Query: 75 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1895 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1954
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1955 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2014
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2015 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2073
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 84
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1835 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1894
Query: 85 N-----------------CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1895 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1954
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1955 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2014
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2015 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2073
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 100/242 (41%), Gaps = 17/242 (7%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2431 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2490
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG----GLGLRNCNTGGLGLRNCN 117
G GL N G G N G+RN NTG G+GL N G+G N
Sbjct: 2491 GLTAGAAGLGNTGFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSG 2550
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 176
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2551 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2610
Query: 177 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
NTG + NTGG NTG + NTG N+G + R + G L R
Sbjct: 2611 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG-----IANSGNVEHRRVHVGQLQQR 2665
Query: 235 NC 236
C
Sbjct: 2666 PC 2667
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1237 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1296
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1297 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1353
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1354 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1413
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1414 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1452
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 101/249 (40%), Gaps = 25/249 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLR 54
P P + G+ N G L + G LR+ G LGL N N G + L
Sbjct: 620 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 676
Query: 55 NCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRN 105
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 677 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLAN 736
Query: 106 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 163
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 737 MGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGI 796
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG 220
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 797 GNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGW 856
Query: 221 LGLRNCNTG 229
+ NTG
Sbjct: 857 FNTGHANTG 865
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1917 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 1976
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 1977 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2036
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2037 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2095
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2096 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2149
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2150 HMDPIVLVPATTIPAQ 2165
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 100/244 (40%), Gaps = 25/244 (10%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 635 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 694
Query: 61 LGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GL 111
LGL N G LG N G +G N GL N G +G N TG G+
Sbjct: 695 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGI 754
Query: 112 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
GL + G+G N G +GL N TG +G N TG G+ N G+ N T
Sbjct: 755 GLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTAST 814
Query: 172 GLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 228
GL N + G+ N NTG + NTGG NTG + NT GL N T
Sbjct: 815 GLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGT 871
Query: 229 GGLG 232
G G
Sbjct: 872 FGTG 875
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 2400 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 2456
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 2457 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 2516
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 2517 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 2571
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 2572 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 2631
Query: 236 CNTGGL 241
NTG
Sbjct: 2632 INTGWF 2637
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1239 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1293
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1294 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1350
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1351 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1410
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1411 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1444
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1307 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1366
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1367 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1426
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1427 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1485
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1486 IPQFPIRITTTGGIG 1500
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1310 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1369
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1370 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1429
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1430 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1488
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1489 FPIRITTTGGIG 1500
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2371 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 2430
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2431 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 2490
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 2491 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 2545
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 2546 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2599
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 140 IGLGNAGSSNYGFANLGVGNIGFDNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 199
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 200 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 259
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 260 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 307
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 140 IGLGNAGSSNYGFANLGVGNIGFDNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 199
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 200 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 259
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 260 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 311
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 140 IGLGNAGSSNYGFANLGVGNIGFDNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 199
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 200 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 259
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 260 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 311
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 72 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 131
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 132 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFDNTGTNNVGVGLTGNHLTGIGGLNSGTGN 191
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 192 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 251
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 252 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 296
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 141 GLGNAGSSNYGFANLGVGNIGFDNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 200
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 201 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 260
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 261 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 311
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 530 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 588
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 589 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 648
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 649 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 708
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 709 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 768
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 769 SGIGNIGLFNSGTGNVGFFNSGTG 792
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2370 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2429
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2430 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2489
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2490 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2544
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 2545 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 2579
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 2370 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 2429
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 2430 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 2489
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 2490 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 2544
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 2545 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 2572
>gi|289576076|ref|ZP_06456303.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
K85]
gi|289540507|gb|EFD45085.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
K85]
Length = 885
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 100/243 (41%), Gaps = 10/243 (4%)
Query: 7 PISTK--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 64
PI+ GL N G +GL N LG N LG N LG N G +G
Sbjct: 519 PITIVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFG 578
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLG 122
N G N GL G +GL N +G +G N G +G N T G+G
Sbjct: 579 NIGDANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIG 635
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
L N G+G N TG +GL N TG +G N T GL N + G+ N G
Sbjct: 636 LTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTG 695
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + NTG + NTGG + NTG N NTG N NTG
Sbjct: 696 LVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTG 755
Query: 240 GLI 242
LI
Sbjct: 756 ALI 758
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 83/189 (43%), Gaps = 15/189 (7%)
Query: 91 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+GL N G +G N T G+GL N G+G N G +GL N TG +G N T
Sbjct: 9 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 68
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 205
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 69 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 128
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQE---NASRSENEP- 261
NTG N NTG N +TG L N + G L RG E + S S + P
Sbjct: 129 INTGWFNTGNANTGIANSGNVDTGALMSGNFSNGIL-----WRGNYEGLFSYSYSLDVPR 183
Query: 262 -CLVKIKFT 269
++ FT
Sbjct: 184 ITILDAHFT 192
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N G +G N T G+GL N G+G N G +GL N TG +G N T
Sbjct: 9 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 68
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 69 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 128
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTG N NTG N +TG L
Sbjct: 129 INTGWFNTGNANTGIANSGNVDTGAL 154
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 31 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N G +G N T G+GL N G+G N G +GL N TG +G N T
Sbjct: 9 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 68
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 69 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 128
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG N +TG L
Sbjct: 129 INTGWFNTGNANTGIANSGNVDTGAL 154
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 41 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
+GL N G +G N T G+GL N G+G N G +GL N TG +G N T
Sbjct: 9 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 68
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 155
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 69 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 128
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG N NTG N +TG L
Sbjct: 129 INTGWFNTGNANTGIANSGNVDTGAL 154
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
+GL N G +G N T G+GL N G+G N G +GL N TG +G N T
Sbjct: 9 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 68
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 165
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 69 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 128
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG N NTG N +TG L
Sbjct: 129 INTGWFNTGNANTGIANSGNVDTGAL 154
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 61 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
+GL N G +G N T G+GL N G+G N G +GL N TG +G N T
Sbjct: 9 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 68
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 175
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 69 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 128
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTG N NTG N +TG L
Sbjct: 129 INTGWFNTGNANTGIANSGNVDTGAL 154
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+GL N G +G N T G+GL N G+G N G +GL N TG +G N T
Sbjct: 9 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 68
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 185
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 69 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 128
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N +TG L
Sbjct: 129 INTGWFNTGNANTGIANSGNVDTGAL 154
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 81 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N G +G N T G+GL N G+G N G +GL N TG +G N T
Sbjct: 9 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 68
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 69 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 128
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG N NTG N +TG L
Sbjct: 129 INTGWFNTGNANTGIANSGNVDTGAL 154
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 12 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N T G+GL N G+G N G +GL N TG +G N TG
Sbjct: 10 GLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 69
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 70 NWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSI 129
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGL 151
NTG N NTG N +TG L
Sbjct: 130 NTGWFNTGNANTGIANSGNVDTGAL 154
>gi|433629402|ref|YP_007263030.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070010]
gi|432160995|emb|CCK58330.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070010]
Length = 3175
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 111/245 (45%), Gaps = 10/245 (4%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2818 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNVGGNNIGIANTGIFDIG 2877
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +GL N + LG N + +G N +G +G
Sbjct: 2878 LANLGSYNIGLANLGDDNLGFGNAGSYNIGLANLGSANLGFANTGSNNIGFANTGSGNIG 2937
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2938 IGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 2997
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG N NTG + NTGG + NTG L + NTG + +
Sbjct: 2998 TGIGNAGSTNTGLFNPGNVNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3057
Query: 238 TGGLI 242
TG I
Sbjct: 3058 TGAFI 3062
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 108/241 (44%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2839 VNTGDSNLGIGNLGDLNFGGVNVGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2898
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--L 131
N + +GL N + LG N + +G N +G +G+ G +G+ + N+G +
Sbjct: 2899 GNAGSYNIGLANLGSANLGFANTGSNNIGFANTGSGNIGIGLTGNGQIGIGSLNSGSNNI 2958
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG N NT
Sbjct: 2959 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGLFNPGNVNT 3018
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3019 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ISGSYSNGFLVSGDYQ 3077
Query: 249 G 249
G
Sbjct: 3078 G 3078
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +G+ N +G N +G N +
Sbjct: 2366 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGVANLGNYSVGFGNSGNYHIGFANTGSAN 2425
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 2426 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 2485
Query: 149 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG L + NTG L +
Sbjct: 2486 ANFGIANSGSYNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNLGDHNTGSFNLGD 2545
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 2546 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2582
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 84/197 (42%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGFANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 113/266 (42%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2802 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNV 2861
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +GL N + LG N
Sbjct: 2862 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGLANLGSANLGFANT 2921
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2922 GSNNIGFANTGSGNIGIGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2981
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG N NTG + NTGG + NTG L
Sbjct: 2982 NTGTGNFGLANSGGFNTGIGNAGSTNTGLFNPGNVNTGSFNPGSFNTGGFNPGSGNTGYL 3041
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA + S S
Sbjct: 3042 NTGDYNTGVANTGDVDTGAFISGSYS 3067
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 99/234 (42%), Gaps = 8/234 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +G+ N +G N
Sbjct: 2359 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGVANLGNYSVGFGNSGNYH 2415
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2416 IGFANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2475
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG L +
Sbjct: 2476 GNVGIGNTGTANFGIANSGSYNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNLGD 2535
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG L + NTG + NTG + NTG N NTG N N G
Sbjct: 2536 HNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFISGNYNNG 2589
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 77/167 (46%), Gaps = 5/167 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
LG N + LGL N +G+ N + +G N + +G+ G +G + N+G
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGVANTGSNNVGFGNTGSNNIGIGLTGDGQIGFGSFNSGS 289
Query: 141 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG N NTGG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGGFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFI 396
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 83/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGFANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 101/250 (40%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDKNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 RGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSFNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 92/216 (42%), Gaps = 5/216 (2%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +G+ N +G N +G N + +G N +
Sbjct: 2374 SNFGIGNTGIFNVGFANVGNHNIGVANLGNYSVGFGNSGNYHIGFANTGSANIGFANTGS 2433
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2434 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2493
Query: 127 NTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG L + NTG L + NTG
Sbjct: 2494 GSYNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNLGDHNTGSFNLGDHNTGSFNS 2553
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + NTG N NTG N N G
Sbjct: 2554 GDYNTGYFNAGDYNTGVANTGNVNTGAFISGNYNNG 2589
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 105/257 (40%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDKNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGRGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSFNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LG N + LGL N +G+ N + +G N + +G+ G +G + N+G
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGVANTGSNNVGFGNTGSNNIGIGLTGDGQIGFGSFNSGS 289
Query: 111 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTGG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGGFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
LG N + LGL N +G+ N + +G N + +G+ G +G + N+G
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGVANTGSNNVGFGNTGSNNIGIGLTGDGQIGFGSFNSGS 289
Query: 131 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 185
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG N NTGG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGGFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGVANTGSNNVGFGNTGSNNIGIGLTGDGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTGG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGGFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 85/201 (42%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDKNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGRGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSFNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 98/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
N G +G N LG N G +G N + +G N + +G+ G +G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 133 LRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
+ N+G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSNNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 91/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNC 126
LG N G +G N + +G N + +G+ G +G + N+G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSNNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 84/199 (42%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N + +G+ G +G + N+G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSNNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 104/255 (40%), Gaps = 19/255 (7%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P GL N +T GL +TG LGL N T +G+ N +G N + G
Sbjct: 1487 PAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSANFG 1546
Query: 63 LRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
N NTG +GL N + +G N LG N + +G N LG
Sbjct: 1547 SANIGGNNIGGANTGIFDIGLANLGSYNIGFGNAGDDNLGFGNFGSYNVGFGNLGNDNLG 1606
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG 170
N + +G N + +G+ G +G + N+G +GL N +G +G N G
Sbjct: 1607 FANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSGNGN 1666
Query: 171 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
+G+ N T GL N NTG + NTG + NTG + NTG + N
Sbjct: 1667 VGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPGSYN 1726
Query: 228 TGGLGLRNCNTGGLI 242
TG + +TG I
Sbjct: 1727 TGLGNTGDVDTGAFI 1741
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 101/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLSTPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNAGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
G N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NFGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 96/233 (41%), Gaps = 15/233 (6%)
Query: 17 NTGGLG-LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GL 71
NT GL L + +G GL N G GL N G+ N + LG +G G
Sbjct: 2292 NTSGLWNLASAASGVSGLLNVGALGSGLANVGNTISGIYNTSPLDLGTPAFGSGLLQGGA 2351
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G + GLG N LG N G G+ N +G N +G+ N +
Sbjct: 2352 GTTILDLAGLGNLNVGLANLGGSNFGIGNTGIFN-----VGFANVGNHNIGVANLGNYSV 2406
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTG 189
G N +G N + +G N +G +G+ TG +G + N+G +GL N G
Sbjct: 2407 GFGNSGNYHIGFANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDG 2466
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 239
+G N TG +G+ N T G+ N + GL N NTG N NTG
Sbjct: 2467 NVGFFNSGTGNVGIGNTGTANFGIANSGSYNTGLGNTGSTNTGLFNPGNVNTG 2519
>gi|433643545|ref|YP_007289304.1| Conserved protein of unknown function, PPE family protein PPE54
(modular protein) [Mycobacterium canettii CIPT 140070008]
gi|432160093|emb|CCK57412.1| Conserved protein of unknown function, PPE family protein PPE54
(modular protein) [Mycobacterium canettii CIPT 140070008]
Length = 3717
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 99/235 (42%), Gaps = 8/235 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N LG N T LG+ N LGL N G +G N LG N GL
Sbjct: 1965 GFANVGDFNLGAGNVGTVNLGVGNLGAQNLGLGNLGDGNVGFSNIGHSNLGFGNS---GL 2021
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 129
+ G G N + +GL N G +GL N TG G+GL N G+G N +G
Sbjct: 2022 AVGLAGIGNAGFGNAGSSNVGLANMGVGNIGLANTGTGNIGIGLVGDNLTGIGGLNSGSG 2081
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---C 186
LGL N TG +G N G G+ N + G+ N T GL N + G+ N
Sbjct: 2082 NLGLFNSGTGNIGFFNSGAGNFGIGNSGSYNTGIGNSGTASTGLFNAGSFNTGVANPGGY 2141
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG + + NTG N NTG + NTG N NTG + N G L
Sbjct: 2142 NTGSFNVGSFNTGDFNPGNTNTGWFNAGDTNTGLFNTGNVNTGAFNSGSLNNGAL 2196
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 89/213 (41%), Gaps = 11/213 (5%)
Query: 37 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 94
N G L N GG LG N +G G N G N GLGL G +GL
Sbjct: 213 NVGEFNLGAANVGGQNLGAANAGSGNFGFGNVGNANFGFGNS---GLGLL-PGVGNIGLG 268
Query: 95 NCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
N + G N +G G N N G+GL N G+G N TG +GL N TG +G
Sbjct: 269 NAGSANYGFANMGSGNFGFANTGNNNIGIGLTGNNLTGIGGLNSGTGNIGLFNSGTGNVG 328
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 209
N TG GL N + G+ N T G N NTG + NTG N NTG
Sbjct: 329 FFNSGTGNFGLFNSGSYNTGIGNSGTASTGWFNGGGFNTGVANPGSYNTGSFNAGNTNTG 388
Query: 210 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG L N NTG N NTG I
Sbjct: 389 DFNPGSINTGWLNTGNINTGIANSGNVNTGVFI 421
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 93/224 (41%), Gaps = 11/224 (4%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 84
N G L N GG LG N +G G N G N GLGL G +GL
Sbjct: 213 NVGEFNLGAANVGGQNLGAANAGSGNFGFGNVGNANFGFGNS---GLGLL-PGVGNIGLG 268
Query: 85 NCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
N + G N +G G N N G+GL N G+G N TG +GL N TG +G
Sbjct: 269 NAGSANYGFANMGSGNFGFANTGNNNIGIGLTGNNLTGIGGLNSGTGNIGLFNSGTGNVG 328
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 199
N TG GL N + G+ N T G N NTG + NTG N NTG
Sbjct: 329 FFNSGTGNFGLFNSGSYNTGIGNSGTASTGWFNGGGFNTGVANPGSYNTGSFNAGNTNTG 388
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG L N NTG N NTG N + G L V
Sbjct: 389 DFNPGSINTGWLNTGNINTGIANSGNVNTGVFISGNYSNGALWV 432
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+G N G +GL N G +GL N TG G+GL N G+G N G LGL N T
Sbjct: 1425 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGT 1484
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N + G+ N T GL N NTG + NTG L + +
Sbjct: 1485 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPGSYNTGSLNVGD 1544
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQE--- 252
NTG + N NTG + NTG N NTG N N G L RG+ E
Sbjct: 1545 TNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFMSGNYNNGLL-----WRGSYEGLF 1599
Query: 253 NASRSENEPCLVKIKFT 269
+ S P I FT
Sbjct: 1600 SLHYSITIPAF-PIHFT 1615
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 86/194 (44%), Gaps = 10/194 (5%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+G N G +GL N G +GL N TG G+GL N G+G N G LGL N T
Sbjct: 842 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGT 901
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N + G+ N T GL N NTG + NTG L + +
Sbjct: 902 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPGSYNTGSLNVGD 961
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENAS 255
NTG + N NTG + NTG N NTG N N G L RG+ E
Sbjct: 962 TNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFMSGNYNNGLL-----WRGSYEGLF 1016
Query: 256 RSENEPCLVKIKFT 269
+ P + + T
Sbjct: 1017 GAYFGPTISQFPIT 1030
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 76/164 (46%), Gaps = 5/164 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G N G +GL N G +GL N TG G+GL N G+G N G LGL N T
Sbjct: 842 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGT 901
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 185
G +G N TG G+ N + G+ N T GL N NTG + NTG L + +
Sbjct: 902 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPGSYNTGSLNVGD 961
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + N NTG + NTG N NTG N N G
Sbjct: 962 TNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFMSGNYNNG 1005
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
G N + +GL N G +GL N TG G+GL N G+G N +G LGL N T
Sbjct: 2031 AGFGNAGSSNVGLANMGVGNIGLANTGTGNIGIGLVGDNLTGIGGLNSGSGNLGLFNSGT 2090
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRN 125
G +G N G G+ N + G+ N T GL N + G+ N NTG + +
Sbjct: 2091 GNIGFFNSGAGNFGIGNSGSYNTGIGNSGTASTGLFNAGSFNTGVANPGGYNTGSFNVGS 2150
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTG N NTG + N G L
Sbjct: 2151 FNTGDFNPGNTNTGWFNAGDTNTGLFNTGNVNTGAFNSGSLNNGAL 2196
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 104/264 (39%), Gaps = 28/264 (10%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
G N + +GL N G +GL N TG G+GL N G+G N +G LGL N TG
Sbjct: 2032 GFGNAGSSNVGLANMGVGNIGLANTGTGNIGIGLVGDNLTGIGGLNSGSGNLGLFNSGTG 2091
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 136
+G N G G+ N + G+ N T GL N + G+ N NTG + +
Sbjct: 2092 NIGFFNSGAGNFGIGNSGSYNTGIGNSGTASTGLFNAGSFNTGVANPGGYNTGSFNVGSF 2151
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNCNTGG 190
NTG N NTG + NTG N NTG + N G L GL + +
Sbjct: 2152 NTGDFNPGNTNTGWFNAGDTNTGLFNTGNVNTGAFNSGSLNNGALWTGDHHGLVSFS--- 2208
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT-----GGLIVPK 245
N + G L + N N G + + + G+ L + + +I P
Sbjct: 2209 ---FNIDITGSTLLDLN------ETFNLGPVHIDQIDIPGMSLFDIHEIIDIGPFMIEPI 2259
Query: 246 SKRGAQENASRSENEPCLVKIKFT 269
+ S N +V + T
Sbjct: 2260 DVPAVTLDIHESINIDPIVLLPAT 2283
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 83/187 (44%), Gaps = 7/187 (3%)
Query: 12 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +GL N TG G+GL N G+G N G LGL N TG +G N TG
Sbjct: 1436 GLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFNSGTG 1495
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G+ N + G+ N T GL N NTG + NTG L + + NTG + N
Sbjct: 1496 NFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPGSYNTGSLNVGDTNTGDVNPGNI 1555
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT-GGLGLRN 185
NTG + NTG N NTG N N GL R G L T +
Sbjct: 1556 NTGWFNTGHSNTGIANSGNVNTGAFMSGNYNN-GLLWRGSYEGLFSLHYSITIPAFPIHF 1614
Query: 186 CNTGGLG 192
+TGG+G
Sbjct: 1615 TSTGGIG 1621
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 80/177 (45%), Gaps = 10/177 (5%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+G N G +GL N G +GL N TG G+GL N G+ N G LGL N T
Sbjct: 2630 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIEGLNSGAGNLGLFNSGT 2689
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N + G+ N T GL N NTG + NTG L + +
Sbjct: 2690 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPGSYNTGSLNVGD 2749
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQE 252
NTG + N NTG + NTG N NTG N N G L RG+ E
Sbjct: 2750 TNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFMSGNYNNGLL-----WRGSYE 2801
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N +G G N G N GLGL G +GL N + G N +G
Sbjct: 230 GAANAGSGNFGFGNVGNANFGFGNS---GLGLL-PGVGNIGLGNAGSANYGFANMGSGNF 285
Query: 72 GLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G N N G+GL N G+G N TG +GL N TG +G N TG GL N +
Sbjct: 286 GFANTGNNNIGIGLTGNNLTGIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGLFNSGSY 345
Query: 130 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G+ N T G N NTG + NTG N NTG + NTG L N
Sbjct: 346 NTGIGNSGTASTGWFNGGGFNTGVANPGSYNTGSFNAGNTNTGDFNPGSINTGWLNTGNI 405
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
NTG N NTG N + G L + +
Sbjct: 406 NTGIANSGNVNTGVFISGNYSNGALWVGDYQ 436
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 75/164 (45%), Gaps = 5/164 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G N G +GL N G +GL N TG G+GL N G+ N G LGL N T
Sbjct: 2630 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIEGLNSGAGNLGLFNSGT 2689
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 185
G +G N TG G+ N + G+ N T GL N NTG + NTG L + +
Sbjct: 2690 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPGSYNTGSLNVGD 2749
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + N NTG + NTG N NTG N N G
Sbjct: 2750 TNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFMSGNYNNG 2793
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 12 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +GL N TG G+GL N G+G N G LGL N TG +G N TG
Sbjct: 853 GLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFNSGTG 912
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G+ N + G+ N T GL N NTG + NTG L + + NTG + N
Sbjct: 913 NFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPGSYNTGSLNVGDTNTGDVNPGNI 972
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
NTG + NTG N NTG N N G
Sbjct: 973 NTGWFNTGHSNTGIANSGNVNTGAFMSGNYNNG 1005
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 61 LGLRNC----NTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 114
L +RN N GG LG N LG N T LG+ N LGL N G +G
Sbjct: 1948 LDIRNLLNLGNVGGVNLGFANVGDFNLGAGNVGTVNLGVGNLGAQNLGLGNLGDGNVGFS 2007
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLG 172
N LG N GL + G G N + +GL N G +GL N TG G+G
Sbjct: 2008 NIGHSNLGFGNS---GLAVGLAGIGNAGFGNAGSSNVGLANMGVGNIGLANTGTGNIGIG 2064
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
L N G+G N +G LGL N TG +G N G G+ N + G+ N T G
Sbjct: 2065 LVGDNLTGIGGLNSGSGNLGLFNSGTGNIGFFNSGAGNFGIGNSGSYNTGIGNSGTASTG 2124
Query: 233 LRNC 236
L N
Sbjct: 2125 LFNA 2128
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Query: 12 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +GL N TG G+GL N G+ N G LGL N TG +G N TG
Sbjct: 2641 GLANMGLGNVGLANTGTGNIGIGLVGDNLTGIEGLNSGAGNLGLFNSGTGNVGFFNSGTG 2700
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G+ N + G+ N T GL N NTG + NTG L + + NTG + N
Sbjct: 2701 NFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPGSYNTGSLNVGDTNTGDVNPGNI 2760
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
NTG + NTG N NTG N N G
Sbjct: 2761 NTGWFNTGHSNTGIANSGNVNTGAFMSGNYNNG 2793
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 102/237 (43%), Gaps = 14/237 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRN 75
GG L N +GL N LG N G L L N G L GL N G +G N
Sbjct: 3140 AGGSALNPVNILNIGLANVGNHNLGFGNV--GNLNLGAANLGDLNVGLGNIGGGNVGFGN 3197
Query: 76 CNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNT 128
G +G N GL G N G +GL N G +GL N TG G+GL N
Sbjct: 3198 VGDGNIGFGNSGLAGLLGHNVGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNL 3257
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 186
G+G N G LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 3258 TGIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGG 3317
Query: 187 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + + NTG + N NTG + NTG N NTG I
Sbjct: 3318 FNTGVANPGSYNTGSFNVGDTNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFI 3374
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 100/266 (37%), Gaps = 37/266 (13%)
Query: 8 ISTKGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNTGGL 61
+ + G N GG+ G N G G N + + G N + G+ N +G
Sbjct: 674 VPSSGFFNSGAGGVSGFGNFGAGSSGWWNQASSAVLGSGSGFLNAGSLSSGVLNLGSGMS 733
Query: 62 GLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
G+ N +T G+G+ +G G L + G L+ LGL N +G N
Sbjct: 734 GIYNTSTLGVGVSAVVSGLGNLGHQLSGLSVAGTTLQQSLILDLGLANVGNFNVGFGNVG 793
Query: 118 TGGLGLRNC--------------------NTGGLGLRNCNTGGL-----GLRNCNTGGLG 152
G N G +G N GL G N G +G
Sbjct: 794 DVNWGAANLGDLNVGLGNIGGGNVGFGNVGDGNIGFGNSGLAGLLGHNVGWGNAGAGNVG 853
Query: 153 LRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
L N G +GL N TG G+GL N G+G N G LGL N TG +G N TG
Sbjct: 854 LANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFNSGTGN 913
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNC 236
G+ N + G+ N T GL N
Sbjct: 914 FGIGNSGSYNTGIGNSGTASTGLFNA 939
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 100/266 (37%), Gaps = 37/266 (13%)
Query: 8 ISTKGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNTGGL 61
+ + G N GG+ G N G G N + + G N + G+ N +G
Sbjct: 1257 VPSSGFFNSGAGGVSGFGNFGAGSSGWWNQASSAVLGSGSGFLNAGSLSSGVLNLGSGMS 1316
Query: 62 GLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
G+ N +T G+G+ +G G L + G L+ LGL N +G N
Sbjct: 1317 GIYNTSTLGVGVSAVVSGLGNLGHQLSGLSVAGTTLQQSLILDLGLANVGNFNVGFGNVG 1376
Query: 118 TGGLGLRNC--------------------NTGGLGLRNCNTGGL-----GLRNCNTGGLG 152
G N G +G N GL G N G +G
Sbjct: 1377 DVNWGAANLGDLNVGLGNIGGGNVGFGNVGDGNIGFGNSGLAGLLGHNVGWGNAGAGNVG 1436
Query: 153 LRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
L N G +GL N TG G+GL N G+G N G LGL N TG +G N TG
Sbjct: 1437 LANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFNSGTGN 1496
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNC 236
G+ N + G+ N T GL N
Sbjct: 1497 FGIGNSGSYNTGIGNSGTASTGLFNA 1522
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 99/266 (37%), Gaps = 37/266 (13%)
Query: 8 ISTKGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNTGGL 61
+ + G N GG+ G N G G N + + G N + G+ N +G
Sbjct: 2462 VPSSGFFNSGAGGVSGFGNFGAGSSGWWNQASSAVLGSGSGFLNAGSLSSGVLNLGSGMS 2521
Query: 62 GLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
G+ N +T G+G+ +G G L + G L+ LGL N +G N
Sbjct: 2522 GIYNTSTLGVGVSAVVSGLGNLGHQLSGLSVAGTTLQQSLILDLGLANVGNFNVGFGNVG 2581
Query: 118 TGGLGLRNC--------------------NTGGLGLRNCNTGGL-----GLRNCNTGGLG 152
G N G +G N GL G N G +G
Sbjct: 2582 DVNWGAANLGDLNVGLGNIGGGNVGFGNVGDGNIGFGNSGLAGLLGHNVGWGNAGAGNVG 2641
Query: 153 LRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
L N G +GL N TG G+GL N G+ N G LGL N TG +G N TG
Sbjct: 2642 LANMGLGNVGLANTGTGNIGIGLVGDNLTGIEGLNSGAGNLGLFNSGTGNVGFFNSGTGN 2701
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNC 236
G+ N + G+ N T GL N
Sbjct: 2702 FGIGNSGSYNTGIGNSGTASTGLFNA 2727
>gi|289444992|ref|ZP_06434736.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289417911|gb|EFD15151.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 2671
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 20/256 (7%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
+G GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2040 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2099
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLG 142
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2100 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVN 2159
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGL 201
NTG + NTG N NTG + N G L + + G +G + + G
Sbjct: 2160 PGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGS 2218
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLIVPKSKRGA---QENA 254
L + N N G + + + G+ L + + G +P+ A + +
Sbjct: 2219 TLLDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHE 2272
Query: 255 SRSENEPCLVKIKFTP 270
S + LV P
Sbjct: 2273 SIHMDPIVLVPATTIP 2288
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGL- 73
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1960 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2019
Query: 74 ----------------RNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2020 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2079
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2080 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2139
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2140 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 100/239 (41%), Gaps = 24/239 (10%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGL- 83
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1960 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 2019
Query: 84 ----------------RNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 2020 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 2079
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 2080 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 2139
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG + NTG N NTG + N G L
Sbjct: 2140 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGAL 2198
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 21/256 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 2042 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 2101
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 2102 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 2161
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 183
NTG + NTG N NTG + N G L + + G +G + + G L
Sbjct: 2162 TVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNGALWTGDYH-GLVGFSFSIDIAGSTL 2220
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGLRNCNTGGLGLRNCNTG 239
+ N N G + + + G+ L + + G + + + L +
Sbjct: 2221 LDLN------ETLNLGPIHIEQIDIPGMSLFDVHEIVEIGPFTIPQVDVPAIPLEIHESI 2274
Query: 240 GL----IVPKSKRGAQ 251
+ +VP + AQ
Sbjct: 2275 HMDPIVLVPATTIPAQ 2290
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1362 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1421
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1422 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1478
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1479 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1538
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1539 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1577
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 760 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 819
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 820 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 874
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 875 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 934
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 935 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 990
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1364 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1418
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1419 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1475
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1476 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1535
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1536 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1569
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 745 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 801
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 802 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 857
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 858 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 916
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 917 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 976
Query: 236 CNTGGL 241
NTG
Sbjct: 977 INTGWF 982
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1551
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1552 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1610
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1611 IPQFPIRITTTGGIG 1625
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1435 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1494
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1495 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1554
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1555 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1613
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1614 FPIRITTTGGIG 1625
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFDNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 432
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 803 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 862
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 863 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 922
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 923 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 982
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 983 NTGHANT---GLANAGTFGTG 1000
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFDNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFDNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 197 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 256
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 257 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFDNTGTNNVGVGLTGNHLTGIGGLNSGTGN 316
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 317 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 376
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 377 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 421
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 266 GLGNAGSSNYGFANLGVGNIGFDNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 325
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 326 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 385
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 386 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 655 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 713
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 714 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 773
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 774 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 833
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 834 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 893
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 894 SGIGNIGLFNSGTGNVGFFNSGTG 917
>gi|254422357|ref|ZP_05036075.1| Pentapeptide repeat protein [Synechococcus sp. PCC 7335]
gi|196189846|gb|EDX84810.1| Pentapeptide repeat protein [Synechococcus sp. PCC 7335]
Length = 346
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 84/238 (35%), Gaps = 26/238 (10%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-----NCNTGGLGLRN 75
+ LR G+ LRN + L N L + G L N GG L
Sbjct: 88 VSLRKARMSGIDLRNSDLNEADLSGANLSQAKLHKASLSGAILHVTNLCRSNLGGANLYR 147
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+ LR N L N N+ LR+ + LR+ + LRN L +
Sbjct: 148 AD-----LRRANLSQTNLSNANSSCAKLRHADLSCANLRHADLSHADLRNT-----YLVD 197
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
N G LR+ N G L N L N N G+ L N LRN G LR
Sbjct: 198 ANLSGTDLRHANLGNADLENAKLWDTNLSNANLRGINLEETN-----LRNVKFIGADLRW 252
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV------PKSK 247
+ + LRN + G LRN N LR N G + N G + PK K
Sbjct: 253 ADLSDVDLRNIDLRGADLRNANLRNADLRGANLEGSKVHGANLKGAYIADMRINPKDK 310
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 60/159 (37%), Gaps = 10/159 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
LR N L N N+ LR+ + LR+ + LRN L + N G
Sbjct: 149 DLRRANLSQTNLSNANSSCAKLRHADLSCANLRHADLSHADLRNT-----YLVDANLSGT 203
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
LR+ N G L N L N N G+ L N LRN G LR + +
Sbjct: 204 DLRHANLGNADLENAKLWDTNLSNANLRGINLEETN-----LRNVKFIGADLRWADLSDV 258
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
LRN + G LRN N LR N G + N G
Sbjct: 259 DLRNIDLRGADLRNANLRNADLRGANLEGSKVHGANLKG 297
>gi|344240751|gb|EGV96854.1| Keratin-associated protein 4-3 [Cricetulus griseus]
Length = 224
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 67/209 (32%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ T L C L NC+ L C+ L C+ L NC+ L C+
Sbjct: 4 LDTCHLDTCYLDTCHLDNCHLDTCHLGTCHLDTCLLDTCHLDTCHLDNCHLDTCHLDTCH 63
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
L C+ L NC+ L C+ L C+ L NC+ L C+
Sbjct: 64 LDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCH 123
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
L C+ L NC+ L C L C+ L C+ L NC+
Sbjct: 124 LDNCHLDTCHLDTCHLDNCHLDTCHLDTCQLDTCFLDTCHIDTCHLDTCHIETCHLDNCH 183
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
L C L C+ L C
Sbjct: 184 LDNCHLDICQLDTCHLDTCHLDTCHLDTC 212
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 69/215 (32%), Gaps = 5/215 (2%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
L C L NC+ L C+ L C+ L NC+ L C+
Sbjct: 8 HLDTCYLDTCHLDNCHLDTCHLGTCHLDTCLLDTCHLDTCHLDNCHLDTCHLDTCHLDNC 67
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
L C+ L NC+ L C+ L C+ L NC+ L C+
Sbjct: 68 HLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNC 127
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
L C+ L NC+ L C L C+ L C+ L NC
Sbjct: 128 HLDTCHLDTCHLDNCHLDTCHLDTCQLDTCFLDTCHIDTCHLDTCHIETCHLDNC----- 182
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
L NC+ L C+ L C+ L C
Sbjct: 183 HLDNCHLDICQLDTCHLDTCHLDTCHLDTCFLNTC 217
>gi|156346859|ref|XP_001621553.1| hypothetical protein NEMVEDRAFT_v1g144443 [Nematostella vectensis]
gi|156207621|gb|EDO29453.1| predicted protein [Nematostella vectensis]
Length = 120
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 48/117 (41%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
+G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 160
G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 161 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
G R+C G R+C G R C G R+C G R+C G R+C
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
G R+C G R+C G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
>gi|289752047|ref|ZP_06511425.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289692634|gb|EFD60063.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 1140
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 558 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 617
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 618 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 674
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 675 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 734
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 735 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 794
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +GL N + +GL N G +G N T G+GL N G+G N G LGL N
Sbjct: 33 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNS 92
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 193
G +G N TG GL N + G+ N TG GL N GL N NTG +
Sbjct: 93 GAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNV 152
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQE- 252
+ NTGG + NTG N NTG N +TG L N + G L RG E
Sbjct: 153 GDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNGIL-----WRGNYEG 207
Query: 253 --NASRSENEP--CLVKIKFT 269
+ S S + P ++ FT
Sbjct: 208 LFSYSYSLDVPRITILDAHFT 228
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +GL N + +GL N G +G N T G+GL N G+G N G LGL N
Sbjct: 33 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNS 92
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 133
G +G N TG GL N + G+ N TG GL N GL N NTG +
Sbjct: 93 GAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNV 152
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTGG + NTG N NTG N +TG L
Sbjct: 153 GDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 190
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 96
G +GL N + +GL N G +G N T G+GL N G+G N G LGL N
Sbjct: 33 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNS 92
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 153
G +G N TG GL N + G+ N TG GL N GL N NTG +
Sbjct: 93 GAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNV 152
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTGG + NTG N NTG N +TG L
Sbjct: 153 GDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 190
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +GL N + +GL N G +G N T G+GL N G+G N G LGL N
Sbjct: 33 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNS 92
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 173
G +G N TG GL N + G+ N TG GL N GL N NTG +
Sbjct: 93 GAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNV 152
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG + NTG N NTG N +TG L
Sbjct: 153 GDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 190
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + +GL N G +G N T G+GL N G+G N G LGL N G
Sbjct: 36 GLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNSGAG 95
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 96 NVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDT 155
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG N NTG N +TG L
Sbjct: 156 NTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 190
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 66/152 (43%), Gaps = 11/152 (7%)
Query: 101 LGLRNCNTGGLGLRNCNTGG-LGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLG 152
+G N G +G N G LG+ N G +GL N G +G N T G+G
Sbjct: 9 VGFGNIGHGNVGFGNSGLGAALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIG 68
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
L N G+G N G LGL N G +G N TG GL N + G+ N TG G
Sbjct: 69 LTGDNQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTG 128
Query: 213 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGL 241
L N GL N NTG + + NTGG
Sbjct: 129 LFNAGGFTTGLANAGSYNTGSFNVGDTNTGGF 160
>gi|385997079|ref|YP_005915377.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|344218125|gb|AEM98755.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length = 3191
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G+ N LG N G LG N LG + + +G N + LG N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNN 679
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N T
Sbjct: 680 IGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGT 739
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G G+ N G G+ N + GL N NTG L + NTG + + NTG + +
Sbjct: 740 GNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGSVNTGS 799
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------ 239
NTGG N NTG + NTG N NTG + ++ GL R N G
Sbjct: 800 VNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAI 858
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIK 267
G+ +P+ S N P + I
Sbjct: 859 GVDIPEIPI-----VSVDVNIPIHIPIT 881
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 98/227 (43%), Gaps = 5/227 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
GL N +G N +GL N +G N LG + + +G N +
Sbjct: 610 FGLANVGGNNVGGANAGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNN 669
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 138
LG N +G N + +G+ +G +G + N+G +GL N G +GL N +
Sbjct: 670 LGFANTGDNNIGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGS 729
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G G+ N TG G+ N G G+ N + GL N NTG L + NTG + +
Sbjct: 730 GNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGS 789
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG N NTG + NTG N NTG I
Sbjct: 790 VNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFI 836
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2370 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2426
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2427 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2486
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 2487 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 2541
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 2542 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2598
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1946 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2005
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2006 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2065
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2066 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2125
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2126 YNTGIANTGDVSTGAFI 2142
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1946 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2005
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2006 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2065
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2066 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2125
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2126 YNTGIANTGDVSTGAF 2141
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2385 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2444
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2445 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2504
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 2505 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 2564
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 2565 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 2621
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 2622 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 2651
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2834 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2893
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2894 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2953
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2954 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3013
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3014 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3073
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3074 TGAFITGSYSNG 3085
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2855 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2914
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2915 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2974
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2975 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3034
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3035 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3093
Query: 249 G 249
G
Sbjct: 3094 G 3094
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2818 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2877
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2878 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2937
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2938 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2997
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2998 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3057
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3058 NTGDYNTG 3065
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 96/235 (40%), Gaps = 17/235 (7%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1071 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1130
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1131 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1185
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1186 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1245
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG NTGG N NTG L + N NTG + +TG I
Sbjct: 1246 TGAFNPGSFNTGSF-----NTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1295
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 89/218 (40%), Gaps = 15/218 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1087 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1143
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1144 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1201
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1202 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSF-- 1259
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG N NTG L + N NTG + +TG
Sbjct: 1260 ---NTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1294
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2815 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2874
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2875 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2934
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2935 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2994
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2995 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3047
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1477 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1533
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1534 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1593
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1594 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1653
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1654 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1713
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1714 SFNPGDSNTGDF 1725
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1489 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1548
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1549 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1608
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1609 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1668
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1669 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1728
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1729 SYNTGLGNTGDVDTGAFI 1746
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 9 STKGLRNC-NTGGLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+T GL N G LG N G GL N +T L N+G L + + G + L
Sbjct: 554 ATSGLSGFGNVGALGSGVANVGNTISGLYNTSTSNLATPAFNSG---LLHHSVGTMTLN- 609
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
GL N +G N +GL N +G N LG + + +G N
Sbjct: 610 -----FGLANVGGNNVGGANAGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFAN 664
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGL 183
+ LG N +G N + +G+ +G +G + N+G +GL N G +GL
Sbjct: 665 TGSNNLGFANTGDNNIGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGL 724
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 240
N +G G+ N TG G+ N G G+ N + GL N NTG L + NTG
Sbjct: 725 FNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGS 784
Query: 241 L 241
+
Sbjct: 785 V 785
>gi|253797231|ref|YP_003030232.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|375294513|ref|YP_005098780.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392430723|ref|YP_006471767.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253318734|gb|ACT23337.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457018|gb|AEB02441.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392052132|gb|AFM47690.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 3196
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 112/268 (41%), Gaps = 22/268 (8%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G+ N LG N G LG N LG + + +G N + LG N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNN 679
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N T
Sbjct: 680 IGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGT 739
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G G+ N G G+ N + GL N NTG L + NTG + + NTG + +
Sbjct: 740 GNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGSVNTGS 799
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------ 239
NTGG N NTG + NTG N NTG + ++ GL R N G
Sbjct: 800 VNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAI 858
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIK 267
G+ +P+ S N P + I
Sbjct: 859 GVDIPEIPI-----VSVDVNIPIHIPIT 881
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 98/227 (43%), Gaps = 5/227 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
GL N +G N +GL N +G N LG + + +G N +
Sbjct: 610 FGLANVGGNNVGGANAGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNN 669
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 138
LG N +G N + +G+ +G +G + N+G +GL N G +GL N +
Sbjct: 670 LGFANTGDNNIGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGS 729
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G G+ N TG G+ N G G+ N + GL N NTG L + NTG + +
Sbjct: 730 GNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGS 789
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG N NTG + NTG N NTG I
Sbjct: 790 VNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFI 836
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2375 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2431
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2432 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2491
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 2492 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 2546
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 2547 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2603
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1951 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2010
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2011 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2070
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2071 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2130
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2131 YNTGIANTGDVSTGAFI 2147
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1951 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2010
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2011 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2070
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2071 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2130
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2131 YNTGIANTGDVSTGAF 2146
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2390 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2449
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2450 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2509
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 2510 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 2569
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 2570 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 2626
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 2627 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 2656
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2839 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2898
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 2899 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2958
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2959 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3018
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3019 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3078
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3079 TGAFITGSYSNG 3090
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2860 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2919
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2920 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2979
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2980 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3039
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3040 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3098
Query: 249 G 249
G
Sbjct: 3099 G 3099
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1071 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1130
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1131 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1185
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1186 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1245
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1246 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1300
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2823 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2882
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2883 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2942
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2943 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 3002
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 3003 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3062
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3063 NTGDYNTG 3070
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1087 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1143
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1144 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1201
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1202 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1261
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1262 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1299
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1101 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1160
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1161 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1220
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1221 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1280
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1281 IGNYNTGIANTGDVDTGAF 1299
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2820 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2879
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2880 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2939
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2940 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2999
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 3000 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3052
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1482 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1538
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1539 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1598
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1599 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1658
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1659 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1718
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1719 SFNPGDSNTGDF 1730
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1494 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1553
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1554 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1613
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1614 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1673
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1674 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1733
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1734 SYNTGLGNTGDVDTGAFI 1751
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 100/241 (41%), Gaps = 17/241 (7%)
Query: 9 STKGLRNC-NTGGLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+T GL N G LG N G GL N +T L N+G L + + G + L
Sbjct: 554 ATSGLSGFGNVGALGSGVANVGNTISGLYNTSTSNLATPAFNSG---LLHHSVGTMTLN- 609
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
GL N +G N +GL N +G N LG + + +G N
Sbjct: 610 -----FGLANVGGNNVGGANAGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFAN 664
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGL 183
+ LG N +G N + +G+ +G +G + N+G +GL N G +GL
Sbjct: 665 TGSNNLGFANTGDNNIGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGL 724
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 240
N +G G+ N TG G+ N G G+ N + GL N NTG L + NTG
Sbjct: 725 FNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGS 784
Query: 241 L 241
+
Sbjct: 785 V 785
>gi|289755476|ref|ZP_06514854.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289696063|gb|EFD63492.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length = 1626
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 116/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 450 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 509
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 510 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 564
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G LGL N G +G N TG GL N + G+ N TG GL N G
Sbjct: 565 GLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 624
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 625 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 684
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 685 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 714
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 1044 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 1103
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 1104 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 1160
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 1161 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 1220
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 1221 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 1280
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 98/246 (39%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 401 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 460
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 461 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 520
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G LGL N
Sbjct: 521 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNSGA 580
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 581 GNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 640
Query: 236 CNTGGL 241
NTGG
Sbjct: 641 TNTGGF 646
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 94/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 391 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 450
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 451 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 510
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 511 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 565
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 566 LNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 618
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 98/265 (36%), Gaps = 30/265 (11%)
Query: 1 MPPIVAPISTKGLRNCN-TGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GL 53
+P I+ P T G N T G N GG+ G N G G N L G+
Sbjct: 335 VPIIIVP-PTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGV 393
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 99
N T G+ N +G GL N GLG L G L
Sbjct: 394 LNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPII 453
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 454 NLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLG 513
Query: 160 G------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 211
+GL N + +GL N G +G N T G+GL N G+G N G L
Sbjct: 514 AALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNL 573
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N G +G N TG GL N
Sbjct: 574 GLFNSGAGNVGFFNSGTGNWGLFNS 598
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 70/180 (38%), Gaps = 19/180 (10%)
Query: 102 GLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
G+ N TG GL N + GL N NTG L N NTGG N NTG + NT
Sbjct: 10 GIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNT 69
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGGLGLRNCN 217
GG N NTG + N G L + + G +G + G L + N N
Sbjct: 70 GGFNTGNVNTGAFNSGSFNNGALWTGDHH-GLVGFSYSIEITGSTLVDIN------ETLN 122
Query: 218 TGGLGLRNCNTGGLGLRN----CNTGGL-IVPKSKRGAQENASRSENEPCLVKIKFTPNL 272
G + + + G+ L + N G I P + + P +V F P++
Sbjct: 123 LGPVHIDQIDIPGMSLFDIHELVNIGPFRIEPIDVPAVVLDIHETMVIPPIV---FLPSM 179
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G+ N TG GL N + GL N NTG L N NTGG N NTG + NT
Sbjct: 10 GIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNT 69
Query: 79 GGLGLRNCNTGGLGLRNCNTGGL 101
GG N NTG + N G L
Sbjct: 70 GGFNTGNVNTGAFNSGSFNNGAL 92
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 32 GLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
G+ N TG GL N + GL N NTG L N NTGG N NTG + NT
Sbjct: 10 GIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNT 69
Query: 89 GGLGLRNCNTGGLGLRNCNTGGL 111
GG N NTG + N G L
Sbjct: 70 GGFNTGNVNTGAFNSGSFNNGAL 92
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 42 GLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
G+ N TG GL N + GL N NTG L N NTGG N NTG + NT
Sbjct: 10 GIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNT 69
Query: 99 GGLGLRNCNTGGLGLRNCNTGGL 121
GG N NTG + N G L
Sbjct: 70 GGFNTGNVNTGAFNSGSFNNGAL 92
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 52 GLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
G+ N TG GL N + GL N NTG L N NTGG N NTG + NT
Sbjct: 10 GIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNT 69
Query: 109 GGLGLRNCNTGGLGLRNCNTGGL 131
GG N NTG + N G L
Sbjct: 70 GGFNTGNVNTGAFNSGSFNNGAL 92
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
G+ N TG GL N + GL N NTG L N NTGG N NTG + NT
Sbjct: 10 GIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNT 69
Query: 119 GGLGLRNCNTGGLGLRNCNTGGL 141
GG N NTG + N G L
Sbjct: 70 GGFNTGNVNTGAFNSGSFNNGAL 92
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
G+ N TG GL N + GL N NTG L N NTGG N NTG + NT
Sbjct: 10 GIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNT 69
Query: 129 GGLGLRNCNTGGLGLRNCNTGGL 151
GG N NTG + N G L
Sbjct: 70 GGFNTGNVNTGAFNSGSFNNGAL 92
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
G+ N TG GL N + GL N NTG L N NTGG N NTG + NT
Sbjct: 10 GIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNT 69
Query: 139 GGLGLRNCNTGGLGLRNCNTGGL 161
GG N NTG + N G L
Sbjct: 70 GGFNTGNVNTGAFNSGSFNNGAL 92
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Query: 92 GLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
G+ N TG GL N + GL N NTG L N NTGG N NTG + NT
Sbjct: 10 GIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNT 69
Query: 149 GGLGLRNCNTGGLGLRNCNTGGL 171
GG N NTG + N G L
Sbjct: 70 GGFNTGNVNTGAFNSGSFNNGAL 92
>gi|167966766|ref|ZP_02549043.1| ppe family protein [Mycobacterium tuberculosis H37Ra]
Length = 1140
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 558 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 617
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 618 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 674
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 675 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 734
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 735 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 794
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +GL N + +GL N G +G N T G+GL N G+G N G +GL N
Sbjct: 33 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 92
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 193
TG +G N TG GL N + G+ N TG GL N GL N NTG +
Sbjct: 93 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNV 152
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQE- 252
+ NTGG + NTG N NTG N +TG L N + G L RG E
Sbjct: 153 GDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNGIL-----WRGNYEG 207
Query: 253 --NASRSENEP--CLVKIKFT 269
+ S S + P ++ FT
Sbjct: 208 LFSYSYSLDVPRITILDAHFT 228
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +GL N + +GL N G +G N T G+GL N G+G N G +GL N
Sbjct: 33 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 92
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 133
TG +G N TG GL N + G+ N TG GL N GL N NTG +
Sbjct: 93 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNV 152
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTGG + NTG N NTG N +TG L
Sbjct: 153 GDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 190
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 96
G +GL N + +GL N G +G N T G+GL N G+G N G +GL N
Sbjct: 33 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 92
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 153
TG +G N TG GL N + G+ N TG GL N GL N NTG +
Sbjct: 93 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNV 152
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTGG + NTG N NTG N +TG L
Sbjct: 153 GDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 190
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +GL N + +GL N G +G N T G+GL N G+G N G +GL N
Sbjct: 33 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 92
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 173
TG +G N TG GL N + G+ N TG GL N GL N NTG +
Sbjct: 93 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNV 152
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG + NTG N NTG N +TG L
Sbjct: 153 GDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 190
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + +GL N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 36 GLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 95
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 96 NIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDT 155
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG N NTG N +TG L
Sbjct: 156 NTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 190
Score = 43.9 bits (102), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 101 LGLRNCNTGGLGLRNCNTGG-LGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLG 152
+G N G +G N G LG+ N G +GL N G +G N T G+G
Sbjct: 9 VGFGNIGHGNVGFGNSGLGAALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIG 68
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
L N G+G N G +GL N TG +G N TG GL N + G+ N TG G
Sbjct: 69 LTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTG 128
Query: 213 LRNCNTGGLGLRNC---NTGGLGLRNCNTGGL 241
L N GL N NTG + + NTGG
Sbjct: 129 LFNAGGFTTGLANAGSYNTGSFNVGDTNTGGF 160
>gi|289444998|ref|ZP_06434742.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289417917|gb|EFD15157.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 2023
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 1441 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 1500
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 1501 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 1557
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 1558 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 1617
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 1618 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 1677
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 116/275 (42%), Gaps = 21/275 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI GL + LGL N LG N LGL N +G N G +G N
Sbjct: 847 SPIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGN 906
Query: 66 CNTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 907 SGLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIG 961
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G LGL N G +G N TG GL N + G+ N TG GL N G
Sbjct: 962 GLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTG 1021
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 1022 LANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG 1081
Query: 240 GLIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 1082 IL-----WRGNYEGLFSYSYSLDVPRITILDAHFT 1111
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +GL N + +G N G +G N T G+GL N G G N G LGL N
Sbjct: 322 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 381
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 133
TG +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 382 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNA 441
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
N NTGG N NTG + NTGG N NTG + N G L
Sbjct: 442 GNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGAL 489
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + +G N G +G N T G+GL N G G N G LGL N
Sbjct: 322 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 381
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 143
TG +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 382 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNA 441
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
N NTGG N NTG + NTGG N NTG + N G L
Sbjct: 442 GNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGAL 489
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 96
G +GL N + +G N G +G N T G+GL N G G N G LGL N
Sbjct: 322 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 381
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 153
TG +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 382 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNA 441
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N NTGG N NTG + NTGG N NTG + N G L
Sbjct: 442 GNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGAL 489
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +GL N + +G N G +G N T G+GL N G G N G LGL N
Sbjct: 322 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 381
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 163
TG +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 382 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNA 441
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
N NTGG N NTG + NTGG N NTG + N G L
Sbjct: 442 GNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGAL 489
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +GL N + +G N G +G N T G+GL N G G N G LGL N
Sbjct: 322 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 381
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 173
TG +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 382 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNA 441
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
N NTGG N NTG + NTGG N NTG + N G L
Sbjct: 442 GNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGAL 489
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +GL N + +G N G +G N T G+GL N G G N G LGL N
Sbjct: 322 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 381
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 183
TG +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 382 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNA 441
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTGG N NTG + NTGG N NTG + N G L
Sbjct: 442 GNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGAL 489
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +GL N + +G N G +G N T G+GL N G G N G LGL N
Sbjct: 322 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 381
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 193
TG +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 382 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNA 441
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTGG N NTG + NTGG N NTG + N G L
Sbjct: 442 GNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGAL 489
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 74/165 (44%), Gaps = 5/165 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + +G N G +G N T G+GL N G G N G LGL N TG
Sbjct: 325 GLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNSGTG 384
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N + GL N NTG L N
Sbjct: 385 NIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNT 444
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG N NTG + NTGG N NTG + N G L
Sbjct: 445 NTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGAL 489
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 98/246 (39%), Gaps = 15/246 (6%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 66
G+ N +G GL N GLG +G G L G L LGL +
Sbjct: 798 SGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIINLGLADV 857
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-LGLRN 125
LGL N LG N LGL N +G N G +G N G LG+ N
Sbjct: 858 GNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGAALGIGN 917
Query: 126 CNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G +GL N G +G N T G+GL N G+G N G LGL N
Sbjct: 918 IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNSGA 977
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 235
G +G N TG GL N + G+ N TG GL N GL N NTG + +
Sbjct: 978 GNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGD 1037
Query: 236 CNTGGL 241
NTGG
Sbjct: 1038 TNTGGF 1043
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 94/233 (40%), Gaps = 12/233 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G+ N +G GL N GLG +G G L G L
Sbjct: 788 SGVLNVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQS 847
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LGL + LGL N LG N LGL N +G N G +G N
Sbjct: 848 PIINLGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNS 907
Query: 127 NTGG-LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 183
G LG+ N +GL N + +GL N G +G N T G+GL N G+G
Sbjct: 908 GLGAALGIGN-----IGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGG 962
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 963 LNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 1015
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 99/264 (37%), Gaps = 28/264 (10%)
Query: 1 MPPIVAPIS----------TKGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GLR 44
+P I+ P + + G N GG+ G N G G N L G+
Sbjct: 732 VPIIIVPPTPGFGNATATPSSGFFNSGAGGVSGFGNFGAGSSGWWNQAHAALAGAGSGVL 791
Query: 45 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGG 100
N T G+ N +G GL N GLG +G G L G L
Sbjct: 792 NVGTLNSGVLNVGSGISGLYNTAIVGLGTPALVSGAGNVGQQLSGVLAAGTALTQSPIIN 851
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 160
LGL + LGL N LG N LGL N +G N G +G N G
Sbjct: 852 LGLADVGNYNLGLGNVGDFNLGAANLGDLNLGLGNIGNANVGFGNIGHGNVGFGNSGLGA 911
Query: 161 ------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 212
+GL N + +GL N G +G N T G+GL N G+G N G LG
Sbjct: 912 ALGIGNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLG 971
Query: 213 LRNCNTGGLGLRNCNTGGLGLRNC 236
L N G +G N TG GL N
Sbjct: 972 LFNSGAGNVGFFNSGTGNWGLFNS 995
>gi|209165355|gb|ACI41239.1| aggregate spider glue 2 [Nephila clavipes]
Length = 714
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 77
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
GLG+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 652
Query: 138 TGGLGLR 144
GLG+
Sbjct: 653 VSGLGVS 659
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 87
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
GLG+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 652
Query: 148 TGGLGLR 154
GLG+
Sbjct: 653 VSGLGVS 659
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 38 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 97
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
GLG+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 652
Query: 158 TGGLGLR 164
GLG+
Sbjct: 653 VSGLGVS 659
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 48 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
GLG+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 652
Query: 168 TGGLGLR 174
GLG+
Sbjct: 653 VSGLGVS 659
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
GLG+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 652
Query: 178 TGGLGLR 184
GLG+
Sbjct: 653 VSGLGVS 659
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
GLG+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 652
Query: 188 TGGLGLR 194
GLG+
Sbjct: 653 VSGLGVS 659
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
GLG+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 652
Query: 198 TGGLGLR 204
GLG+
Sbjct: 653 VSGLGVS 659
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
GLG+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 652
Query: 208 TGGLGLR 214
GLG+
Sbjct: 653 VSGLGVS 659
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
GLG+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 652
Query: 218 TGGLGLR 224
GLG+
Sbjct: 653 VSGLGVS 659
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
GLG+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 652
Query: 228 TGGLGLR 234
GLG+
Sbjct: 653 VSGLGVS 659
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
GLG+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 652
Query: 238 TGGL 241
GL
Sbjct: 653 VSGL 656
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GL
Sbjct: 542 GVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGL 601
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G+ GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GL
Sbjct: 602 GVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGL 656
Query: 132 GLR 134
G+
Sbjct: 657 GVS 659
>gi|289759495|ref|ZP_06518873.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289715059|gb|EFD79071.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 1102
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 520 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 579
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 580 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 636
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 637 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 696
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 697 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 756
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 84/197 (42%), Gaps = 17/197 (8%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
+R T G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 1 MRAAATSAFG--NMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGN 58
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+G N TG GL N + G+ N TG GL N GL N NTG + + N
Sbjct: 59 IGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTN 118
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQE---NA 254
TGG + NTG N NTG N +TG L N + G L RG E +
Sbjct: 119 TGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNGIL-----WRGNYEGLFSY 173
Query: 255 SRSENEP--CLVKIKFT 269
S S + P ++ FT
Sbjct: 174 SYSLDVPRITILDAHFT 190
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 9 STKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
+T N G +G N T G+GL N G+G N G +GL N TG +G N
Sbjct: 5 ATSAFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNS 64
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 123
TG GL N + G+ N TG GL N GL N NTG + + NTGG
Sbjct: 65 GTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNP 124
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
+ NTG N NTG N +TG L
Sbjct: 125 GSINTGWFNTGNANTGIANSGNVDTGAL 152
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
+R T G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 1 MRAAATSAFG--NMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGN 58
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 127
+G N TG GL N + G+ N TG GL N GL N NTG + + N
Sbjct: 59 IGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTN 118
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
TGG + NTG N NTG N +TG L
Sbjct: 119 TGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 152
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
+R T G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 1 MRAAATSAFG--NMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGN 58
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 137
+G N TG GL N + G+ N TG GL N GL N NTG + + N
Sbjct: 59 IGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTN 118
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
TGG + NTG N NTG N +TG L
Sbjct: 119 TGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 152
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+R T G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 1 MRAAATSAFG--NMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGN 58
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 147
+G N TG GL N + G+ N TG GL N GL N NTG + + N
Sbjct: 59 IGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTN 118
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
TGG + NTG N NTG N +TG L
Sbjct: 119 TGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 152
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
+R T G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 1 MRAAATSAFG--NMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGN 58
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 157
+G N TG GL N + G+ N TG GL N GL N NTG + + N
Sbjct: 59 IGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTN 118
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
TGG + NTG N NTG N +TG L
Sbjct: 119 TGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 152
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
+R T G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 1 MRAAATSAFG--NMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGN 58
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 167
+G N TG GL N + G+ N TG GL N GL N NTG + + N
Sbjct: 59 IGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTN 118
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
TGG + NTG N NTG N +TG L
Sbjct: 119 TGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 152
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
+R T G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 1 MRAAATSAFG--NMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGN 58
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 177
+G N TG GL N + G+ N TG GL N GL N NTG + + N
Sbjct: 59 IGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTN 118
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
TGG + NTG N NTG N +TG L
Sbjct: 119 TGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 152
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
+R T G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 1 MRAAATSAFG--NMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGN 58
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 187
+G N TG GL N + G+ N TG GL N GL N NTG + + N
Sbjct: 59 IGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTN 118
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
TGG + NTG N NTG N +TG L
Sbjct: 119 TGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 152
>gi|326428608|gb|EGD74178.1| hypothetical protein PTSG_06186 [Salpingoeca sp. ATCC 50818]
Length = 927
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 87/235 (37%), Gaps = 15/235 (6%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C+ G G+ L++ N G L N + G LR C+ G L N G L N
Sbjct: 614 CDLRGADFAESQLRGIVLKDANLVGAALYNASLSGCDLRGCDLTGCDLTESNLSGALLTN 673
Query: 76 -CNTGG----LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
C TG + NC+ G L C+ L +CN G L N N L+ C+ G
Sbjct: 674 ACLTGATLKKADMSNCDLQGHDLSGCDLTECNLTSCNLQGANLYNANMQDATLKACSLLG 733
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-----CNTGGLGLRN 185
LR N L NC+ LR + LRN N G L + C+ G L
Sbjct: 734 ANLREAN-----LNNCDMHMHDLRATDLSDANLRNTNLWGANLEDACLSSCDLRGARLGK 788
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
N L + C+ G +C+ G G CN G L N GG
Sbjct: 789 ANLTRTDLDDATLVQADFSECDLTGFDFSDCDMSGCGFNKCNLKGANLSNSKMGG 843
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 88/233 (37%), Gaps = 15/233 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG----LGLRNCN 67
L++ N G L N + G LR C+ G L N G L N C TG + NC+
Sbjct: 631 LKDANLVGAALYNASLSGCDLRGCDLTGCDLTESNLSGALLTNACLTGATLKKADMSNCD 690
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G L C+ L +CN G L N N L+ C+ G LR N L NC+
Sbjct: 691 LQGHDLSGCDLTECNLTSCNLQGANLYNANMQDATLKACSLLGANLREAN-----LNNCD 745
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRN-----CNTGGLGLRNCNTGGLGLRNCNTGGLG 182
LR + LRN N G L + C+ G L N L +
Sbjct: 746 MHMHDLRATDLSDANLRNTNLWGANLEDACLSSCDLRGARLGKANLTRTDLDDATLVQAD 805
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
C+ G +C+ G G CN G L N GG L++ L+N
Sbjct: 806 FSECDLTGFDFSDCDMSGCGFNKCNLKGANLSNSKMGGSSLKHAILAHARLQN 858
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 88/252 (34%), Gaps = 20/252 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A + + NC+ G L C+ L +CN G L N N L+ C+ G LR
Sbjct: 679 ATLKKADMSNCDLQGHDLSGCDLTECNLTSCNLQGANLYNANMQDATLKACSLLGANLRE 738
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-----CNTGGLGLRNCNTGG 120
N L NC+ LR + LRN N G L + C+ G L N
Sbjct: 739 AN-----LNNCDMHMHDLRATDLSDANLRNTNLWGANLEDACLSSCDLRGARLGKANLTR 793
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L + C+ G +C+ G G CN G L N GG L++
Sbjct: 794 TDLDDATLVQADFSECDLTGFDFSDCDMSGCGFNKCNLKGANLSNSKMGGSSLKHAILAH 853
Query: 181 LGLRNC--NTGGLGLRNCNTGGL--------GLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
L+N N L + + L L + N G N + L++
Sbjct: 854 ARLQNTILNKAILQFADLSYAYLDGAKLQAADLSHANLLGATFTNTDLRSAVLKDSVHDN 913
Query: 231 LGLRNCNTGGLI 242
+ N N G++
Sbjct: 914 VNFENANMTGVV 925
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 103/271 (38%), Gaps = 22/271 (8%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A + T L+ N L + + GL L + G L G LR + L
Sbjct: 554 ADLLTTNLKTANLSNCDLSHQHLSGLDLADTTLAGANLTGSIMMGTLLRRSDLNRANLSG 613
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
C+ G G+ L++ N G L N + G LR C+ G L N G L N
Sbjct: 614 CDLRGADFAESQLRGIVLKDANLVGAALYNASLSGCDLRGCDLTGCDLTESNLSGALLTN 673
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G L+ + + NC+ G L C+ L +CN G L N N L+
Sbjct: 674 ACLTGATLKKAD-----MSNCDLQGHDLSGCDLTECNLTSCNLQGANLYNANMQDATLKA 728
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-----CNTGG 240
C+ G LR N L NC+ LR + LRN N G L + C+ G
Sbjct: 729 CSLLGANLREAN-----LNNCDMHMHDLRATDLSDANLRNTNLWGANLEDACLSSCDLRG 783
Query: 241 LIVPKSKRGAQENASRSE-NEPCLVKIKFTP 270
R + N +R++ ++ LV+ F+
Sbjct: 784 ------ARLGKANLTRTDLDDATLVQADFSE 808
>gi|82704830|ref|XP_726716.1| erythrocyte membrane protein [Plasmodium yoelii yoelii 17XNL]
gi|23482242|gb|EAA18281.1| ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 [Plasmodium yoelii yoelii]
Length = 1665
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 91/251 (36%), Gaps = 13/251 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I + L++ N L+ N L+ N + NT L+ NT L+ N
Sbjct: 1252 IRLQNLQSSNRHSQNLQPSNNNPQNLQPSNNNAQNPQRSNTNAQNLQRSNTNAQNLQRSN 1311
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN 125
T L+ N+ L+ NT L+ NT L L N + L L + L
Sbjct: 1312 TNAQNLQRSNSHPQNLQPSNTHPQNLQPSNTHAQNLQLSNSHAQNLQLSSIYLQNLQNLQ 1371
Query: 126 -------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
N ++ CN L+ CN + CN ++ CN ++ CN
Sbjct: 1372 NLQNLQPFNIYPHNIQPCNRHPHNLQPCNRHIHNHQPCNRHPQNIQLCNIHLQNIQLCNR 1431
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
+ CN ++ CN ++ CN ++ CN ++ CN ++ CN
Sbjct: 1432 HPQNIHLCNRHPQNIQPCNRHPQNIQPCNRHPQNIQPCNRHPQNIQPCNRHPQNIQPCNN 1491
Query: 239 GGL----IVPK 245
+ I+P+
Sbjct: 1492 NFVNQQTIIPQ 1502
>gi|289576082|ref|ZP_06456309.1| predicted protein [Mycobacterium tuberculosis K85]
gi|289540513|gb|EFD45091.1| predicted protein [Mycobacterium tuberculosis K85]
Length = 2053
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 96/229 (41%), Gaps = 24/229 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGL- 73
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1746 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1805
Query: 74 ----------------RNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 115
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1806 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1865
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1866 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 1925
Query: 176 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG L + + NTGG+ NTG + NTG N NTG
Sbjct: 1926 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAF 1974
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 546 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 605
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 606 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 660
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 661 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGDVGFFNSGTGNFGIGNSGRFNTGIGNS 720
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 721 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 776
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1148 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1207
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1208 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1264
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1265 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1324
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1325 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1363
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 531 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 587
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 588 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 643
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 644 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGDVGFFNSGT 702
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 703 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 762
Query: 236 CNTGGL 241
NTG
Sbjct: 763 INTGWF 768
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1150 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1204
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1205 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1261
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1262 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1321
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1322 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1355
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 92/217 (42%), Gaps = 24/217 (11%)
Query: 47 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGL- 103
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1746 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1805
Query: 104 ----------------RNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 145
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1806 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1865
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1866 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 1925
Query: 206 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG L + + NTGG+ NTG + NTG
Sbjct: 1926 AGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTG 1962
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 103/239 (43%), Gaps = 19/239 (7%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1218 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1277
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
TG +G N TG GL N + G+ N TG GL N N NTG +
Sbjct: 1278 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAG-------NFNTGIANPGSY 1330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
NTG + + NTGG + NTG NTG + NTG L + ++ G+ R
Sbjct: 1331 NTGSFNVGDTNTGGFNPGDINTGWF-----NTGIMNTGTRNTGAL-MSGTDSNGMLWRGD 1384
Query: 207 NTGGLGLRN-CNTGGLGLRNCNTGGLG-LRNCNTGGLIVPKSKRGAQENASRSENEPCL 263
+ G GL +R TGG+G + +T I+P +A S P +
Sbjct: 1385 HEGLFGLSYGITIPQFPIRITTTGGIGPIVIPDT--TILPPLHLQITGDADYSFTVPDI 1441
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Query: 10 TKGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ GL N G +GL N TG G+GL G+G N TG LGL N TG +G N
Sbjct: 1828 SWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTG 1887
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG GL N + G+ N T GL N GL N NTG L + + NTGG+
Sbjct: 1888 TGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPG 1947
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGL 151
NTG + NTG N NTG
Sbjct: 1948 TVNTGWFNTGHTNTGLFNTGNVNTGAF 1974
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1221 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1280
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1281 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1340
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1341 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1399
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1400 FPIRITTTGGIG 1411
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 88/209 (42%), Gaps = 24/209 (11%)
Query: 57 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGL- 113
N GG+ L N G L N G + + N GG LGL N TG LG N G G
Sbjct: 1746 NVGGVNLGLANVGEFNLGAGNVGNINVGAGNLGGSNLGLGNVGTGNLGFGNIGAGNFGFG 1805
Query: 114 ----------------RNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 155
N +G GL N G +GL N TG G+GL G+G N
Sbjct: 1806 NAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLN 1865
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
TG LGL N TG +G N TG GL N + G+ N T GL N GL N
Sbjct: 1866 SGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLAN 1925
Query: 216 C---NTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTGG+ NTG
Sbjct: 1926 AGSYNTGSLNVGSFNTGGVNPGTVNTGWF 1954
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 81/194 (41%), Gaps = 15/194 (7%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
LGL N G LGL N G LG N G +G N GL N G +G
Sbjct: 596 LGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGF 655
Query: 74 RNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N TG G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 656 ANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGDVGFFNSGTGNFGIGNSGRFNT 715
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 188
G+ N T GL N + G+ N NTG + NTGG NTG + NT
Sbjct: 716 GIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT 775
Query: 189 GGLGLRNCNTGGLG 202
GL N T G G
Sbjct: 776 ---GLANAGTFGTG 786
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 51 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 110
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 111 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 170
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 171 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 218
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 51 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 110
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 111 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 170
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 171 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 222
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 51 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 110
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 165
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 111 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 170
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 171 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 222
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 51 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 110
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 175
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 111 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 170
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 171 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 222
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 441 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 499
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 500 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 559
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 560 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 619
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 620 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 679
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 680 SGIGNIGLFNSGTGDVGFFNSGTG 703
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 68/160 (42%), Gaps = 8/160 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +G N GL N G +G N TG G+GL + G+G N G +GL N
Sbjct: 630 VGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFN 689
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 132
TG +G N TG G+ N G+ N T GL N + G+ N NTG
Sbjct: 690 SGTGDVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFN 749
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
+ NTGG NTG + NT GL N T G G
Sbjct: 750 AGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTG 786
>gi|254549250|ref|ZP_05139697.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|297632792|ref|ZP_06950572.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297729767|ref|ZP_06958885.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|306782933|ref|ZP_07421255.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|306796040|ref|ZP_07434342.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|313657096|ref|ZP_07813976.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|392385024|ref|YP_005306653.1| PPE6 [Mycobacterium tuberculosis UT205]
gi|308332211|gb|EFP21062.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308343506|gb|EFP32357.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|378543575|emb|CCE35846.1| PPE6 [Mycobacterium tuberculosis UT205]
Length = 3186
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 2536
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 2537 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2593
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 2559
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 2560 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 2616
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 2617 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 2646
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2829 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2888
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2889 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2948
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2949 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3008
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3009 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3068
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3069 TGAFITGSYSNG 3080
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2850 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2909
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2910 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2969
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2970 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3029
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3030 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3088
Query: 249 G 249
G
Sbjct: 3089 G 3089
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2813 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2872
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2873 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2932
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2933 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2992
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2993 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3052
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3053 NTGDYNTG 3060
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2810 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2869
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2870 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2929
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2930 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2989
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2990 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3042
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
>gi|306806111|ref|ZP_07442779.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|306966309|ref|ZP_07478970.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308347367|gb|EFP36218.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308355942|gb|EFP44793.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
Length = 3186
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 2536
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 2537 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2593
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 2559
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 2560 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 2616
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 2617 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 2646
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2829 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2888
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2889 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2948
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2949 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3008
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3009 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3068
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3069 TGAFITGSYSNG 3080
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2850 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2909
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2910 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2969
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2970 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3029
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3030 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3088
Query: 249 G 249
G
Sbjct: 3089 G 3089
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2813 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2872
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2873 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2932
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2933 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2992
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2993 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3052
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3053 NTGDYNTG 3060
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2810 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2869
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2870 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2929
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2930 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2989
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2990 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3042
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
>gi|449065458|ref|YP_007432541.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|449033966|gb|AGE69393.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1061
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 98/240 (40%), Gaps = 8/240 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N G +GL N LG N LG N LG N G +G N
Sbjct: 479 IVNIGLANVGNGNVGLGNIGNLNLGAANIGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIG 538
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 125
G N GL G +GL N +G +G N G +G N T G+GL
Sbjct: 539 DANFGFGNS---GLAAGLAGMGNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTG 595
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+G N TG +GL N TG +G N T GL N + G+ N GL N
Sbjct: 596 DNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVN 655
Query: 186 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTGG + NTG N NTG N NTG LI
Sbjct: 656 AGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 715
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 66/154 (42%), Gaps = 13/154 (8%)
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
N G +GL N TG +G N TG GL N + G+ N TG GL N GL
Sbjct: 1 MNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGL 60
Query: 184 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
N NTG + + NTGG + NTG N NTG N +TG L N + G
Sbjct: 61 ANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNGI 120
Query: 241 LIVPKSKRGAQE---NASRSENEP--CLVKIKFT 269
L RG E + S S + P ++ FT
Sbjct: 121 L-----WRGNYEGLFSYSYSLDVPRITILDAHFT 149
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
N G +GL N TG +G N TG GL N + G+ N TG GL N GL
Sbjct: 1 MNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGL 60
Query: 74 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
N NTG + + NTGG + NTG N NTG N +TG L
Sbjct: 61 ANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
N G +GL N TG +G N TG GL N + G+ N TG GL N GL
Sbjct: 1 MNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGL 60
Query: 94 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
N NTG + + NTGG + NTG N NTG N +TG L
Sbjct: 61 ANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
N G +GL N TG +G N TG GL N + G+ N TG GL N GL
Sbjct: 1 MNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGL 60
Query: 114 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
N NTG + + NTGG + NTG N NTG N +TG L
Sbjct: 61 ANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
N G +GL N TG +G N TG GL N + G+ N TG GL N GL
Sbjct: 1 MNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGL 60
Query: 134 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
N NTG + + NTGG + NTG N NTG N +TG L
Sbjct: 61 ANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
N G +GL N TG +G N TG GL N + G+ N TG GL N GL
Sbjct: 1 MNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGL 60
Query: 154 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N NTG + + NTGG + NTG N NTG N +TG L
Sbjct: 61 ANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 111
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
N G +GL N TG +G N TG GL N + G+ N TG GL N GL
Sbjct: 1 MNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGL 60
Query: 174 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
N NTG + + NTGG + NTG N NTG N +TG L
Sbjct: 61 ANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 111
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 68
GL N TG +G N TG GL N + G+ N TG GL N GL N NT
Sbjct: 9 GLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNT 68
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
G + + NTGG + NTG N NTG N +TG L
Sbjct: 69 GSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGAL 111
>gi|306970504|ref|ZP_07483165.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|307078232|ref|ZP_07487402.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308359899|gb|EFP48750.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308363801|gb|EFP52652.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 3186
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 2536
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 2537 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2593
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 2559
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 2560 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 2616
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 2617 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 2646
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2829 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2888
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 2889 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2948
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2949 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3008
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3009 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3068
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3069 TGAFITGSYSNG 3080
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2850 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2909
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2910 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2969
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2970 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3029
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3030 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3088
Query: 249 G 249
G
Sbjct: 3089 G 3089
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2813 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2872
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2873 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2932
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2933 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2992
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2993 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3052
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3053 NTGDYNTG 3060
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2810 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2869
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2870 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2929
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2930 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2989
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2990 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3042
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
>gi|440579757|emb|CCG10160.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 3176
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2355 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2411
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2412 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2471
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 2472 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 2526
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 2527 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2583
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1931 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1990
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1991 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2050
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2051 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2110
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2111 YNTGIANTGDVSTGAFI 2127
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1931 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1990
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1991 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2050
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2051 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2110
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2111 YNTGIANTGDVSTGAF 2126
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2370 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2429
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2430 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2489
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 2490 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 2549
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 2550 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 2606
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 2607 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 2636
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2819 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2878
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2879 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2938
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2939 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 2998
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 2999 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3058
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3059 TGAFITGSYSNG 3070
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2840 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2899
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2900 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2959
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2960 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3019
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3020 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3078
Query: 249 G 249
G
Sbjct: 3079 G 3079
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 93/225 (41%), Gaps = 12/225 (5%)
Query: 25 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
N N G L N GG +G N G G+ + LG N G LG N LG
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDN-----LG 1115
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGG 140
N LG N G +G N + +G N N G+GL G G N +G
Sbjct: 1116 FGNVGNDNLGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGN 1175
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
+GL N + +G N +G G+ N NTG N NTG + NTG + N
Sbjct: 1176 IGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFN 1235
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1280
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2803 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2862
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2863 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2922
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2923 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2982
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2983 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3042
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3043 NTGDYNTG 3050
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2800 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2859
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2860 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2919
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2920 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2979
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2980 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3032
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1462 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1518
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1519 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1578
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1579 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1638
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1639 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDANTGIGNTGSFNTG 1698
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1699 SFNPGDSNTGDF 1710
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1474 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1533
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1534 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1593
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1594 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1653
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1654 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDANTGIGNTGSFNTGSFNPGDSNTGDFNPG 1713
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1714 SYNTGLGNTGDVDTGAFI 1731
>gi|306779146|ref|ZP_07417483.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|306787301|ref|ZP_07425623.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308327856|gb|EFP16707.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308336013|gb|EFP24864.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
Length = 3186
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 2536
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 2537 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2593
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 2559
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 2560 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 2616
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 2617 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 2646
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2829 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2888
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 2889 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2948
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2949 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3008
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3009 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANAGDVD 3068
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3069 TGAFITGSYSNG 3080
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2850 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2909
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2910 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2969
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2970 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3029
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3030 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANAGDVDTGAF-ITGSYSNGFLVSGDYQ 3088
Query: 249 G 249
G
Sbjct: 3089 G 3089
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2813 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2872
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2873 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2932
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2933 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2992
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2993 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3052
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA S S
Sbjct: 3053 NTGDYNTGVANAGDVDTGAFITGSYS 3078
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2810 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2869
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2870 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2929
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2930 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2989
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2990 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3042
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
>gi|148821501|ref|YP_001286255.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|148720028|gb|ABR04653.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 3166
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2345 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2401
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2402 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2461
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 2462 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 2516
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 2517 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2573
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1921 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1980
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1981 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2040
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2041 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2100
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2101 YNTGIANTGDVSTGAFI 2117
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1921 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1980
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1981 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2040
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2041 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2100
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2101 YNTGIANTGDVSTGAF 2116
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2360 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2419
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2420 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2479
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 2480 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 2539
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 2540 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 2596
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 2597 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 2626
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2809 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2868
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2869 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2928
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2929 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 2988
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 2989 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3048
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3049 TGAFITGSYSNG 3060
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2830 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2889
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2890 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2949
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2950 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3009
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3010 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3068
Query: 249 G 249
G
Sbjct: 3069 G 3069
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2793 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2852
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2853 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2912
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2913 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2972
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2973 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3032
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3033 NTGDYNTG 3040
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2790 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2849
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2850 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2909
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2910 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2969
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2970 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3022
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 99/251 (39%), Gaps = 22/251 (8%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G GL N T G N +T L N+G L N +T GL +TG
Sbjct: 1453 ASGLLNVGALGSGLANVGTTVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTG 1509
Query: 70 GL---------GLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG--GLGLRN 115
+ G N LG N LG N N GG + NTG +GL N
Sbjct: 1510 TMVLNLGLANHGTLNVGIANLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLAN 1569
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
+ +G N LG N + +G N N G+GL G G N +G +GL
Sbjct: 1570 LGSYNIGFGNFGDDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGL 1629
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG 230
N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1630 FNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGS 1689
Query: 231 LGLRNCNTGGL 241
+ NTG
Sbjct: 1690 FNPGDSNTGDF 1700
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 93/225 (41%), Gaps = 19/225 (8%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N +
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFANTGSNNIGFANTGSN 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-- 165
+G+ G +G + N+G +GL N +G +G N G +G+ N T GL N
Sbjct: 1604 NIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTG 1663
Query: 166 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
NTG + NTG + NTG + NTG + NTG
Sbjct: 1664 STNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPGSYNTG 1708
>gi|15839689|ref|NP_334726.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|254363274|ref|ZP_04979320.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|385989814|ref|YP_005908112.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|422811229|ref|ZP_16859633.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|13879812|gb|AAK44540.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|134148788|gb|EBA40833.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|323721292|gb|EGB30348.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|339297007|gb|AEJ49117.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|379026423|dbj|BAL64156.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 3186
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 2536
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 2537 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2593
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 2559
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 2560 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 2616
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 2617 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 2646
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2829 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2888
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2889 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2948
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2949 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3008
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3009 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3068
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3069 TGAFITGSYSNG 3080
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2850 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2909
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2910 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2969
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2970 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3029
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3030 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3088
Query: 249 G 249
G
Sbjct: 3089 G 3089
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2813 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2872
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2873 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2932
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2933 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2992
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2993 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3052
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3053 NTGDYNTG 3060
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2810 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2869
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2870 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2929
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2930 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2989
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2990 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3042
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
>gi|148660070|ref|YP_001281593.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148504222|gb|ABQ72031.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 2373
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 1552 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 1608
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 1609 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 1668
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 1669 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 1723
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 1724 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 1780
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1128 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1187
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1188 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1247
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1248 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1307
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 1308 YNTGIANTGDVSTGAFI 1324
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1128 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1187
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1188 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1247
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1248 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1307
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 1308 YNTGIANTGDVSTGAF 1323
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 1567 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 1626
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 1627 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1686
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 1687 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 1746
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 1747 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 1803
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 1804 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 1833
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2016 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2075
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2076 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2135
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2136 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 2195
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 2196 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 2255
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 2256 TGAFITGSYSNG 2267
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2037 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2096
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2097 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2156
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2157 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 2216
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 2217 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 2275
Query: 249 G 249
G
Sbjct: 2276 G 2276
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 248 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 307
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 308 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 362
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 363 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 422
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 423 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 477
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2000 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2059
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2060 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2119
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2120 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2179
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2180 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 2239
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 2240 NTGDYNTG 2247
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 264 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 320
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 321 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 378
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 379 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 438
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 439 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 476
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 278 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 337
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 338 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 397
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 398 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 457
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 458 IGNYNTGIANTGDVDTGAF 476
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 1997 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2056
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2057 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2116
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2117 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2176
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2177 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 2229
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 659 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 715
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 716 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 775
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 776 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 835
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 836 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 895
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 896 SFNPGDSNTGDF 907
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 671 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 730
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 731 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 790
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 791 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 850
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 851 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 910
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 911 SYNTGLGNTGDVDTGAFI 928
>gi|289752048|ref|ZP_06511426.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289692635|gb|EFD60064.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 1183
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +G N G +G N G L G+ N G G N G +GL N G G N
Sbjct: 603 GNVGFGNLGHGNVGFGNSGLGALPGIGNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNL- 661
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G+GL N G G N G LGL N TG +G N TG GL N + G+ N
Sbjct: 662 --GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSG 719
Query: 168 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
TG GL N + GL N NTG L N NTGG N NTG + NTGG
Sbjct: 720 TGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTG 779
Query: 225 NCNTGGLGLRNCNTGGL 241
N NTG + N G L
Sbjct: 780 NVNTGAFNSGSFNNGAL 796
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 13 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 72
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 73 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 125
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTGG + NTG N NTG NTG I
Sbjct: 126 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAFI 172
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 13 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 72
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 73 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 125
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTGG + NTG N NTG NTG
Sbjct: 126 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 171
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 13 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 72
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 73 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 125
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTGG + NTG N NTG NTG
Sbjct: 126 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 171
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +GL N +G +G N G +G N T G+GL N G+G N G +GL N
Sbjct: 13 VGNIGLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFN 72
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
TG +GL N TG GL N+GG N G N G N NTG +
Sbjct: 73 SGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGS 125
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG + + NTGG + NTG N NTG NTG
Sbjct: 126 YNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 171
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N +G +G N G +G N T G+GL N G+G N G +GL N TG
Sbjct: 17 GLGNAGSGNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTG 76
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+GL N TG GL N+GG N G N G N NTG + NTG
Sbjct: 77 NVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFNTGVANPGSYNTG 129
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ + NTGG + NTG N NTG NTG
Sbjct: 130 SFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 171
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 74/174 (42%), Gaps = 15/174 (8%)
Query: 38 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 97
G +GL N +G +G N +G+ N G G N G+GL N G+G N
Sbjct: 13 VGNIGLGNAGSGNVGFGN-----MGVGNIGFGNTGTNNL---GIGLTGDNQTGIGGLNSG 64
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
G +GL N TG +GL N TG GL N+GG N G N G N N
Sbjct: 65 AGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFN 117
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
TG + NTG + + NTGG + NTG N NTG NTG
Sbjct: 118 TGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 171
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 74/174 (42%), Gaps = 15/174 (8%)
Query: 48 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
G +GL N +G +G N +G+ N G G N G+GL N G+G N
Sbjct: 13 VGNIGLGNAGSGNVGFGN-----MGVGNIGFGNTGTNNL---GIGLTGDNQTGIGGLNSG 64
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G +GL N TG +GL N TG GL N+GG N G N G N N
Sbjct: 65 AGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG-----NFN 117
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
TG + NTG + + NTGG + NTG N NTG NTG
Sbjct: 118 TGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTVNTGAF 171
>gi|433631009|ref|YP_007264637.1| Conserved protein of unknown function, PPE family protein PPE24
(fragment) [Mycobacterium canettii CIPT 140070010]
gi|432162602|emb|CCK59982.1| Conserved protein of unknown function, PPE family protein PPE24
(fragment) [Mycobacterium canettii CIPT 140070010]
Length = 793
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 96/229 (41%), Gaps = 10/229 (4%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
N G +G N G +G N +G LG N +G G N +G LG N G LG
Sbjct: 231 ANLGVGNVGFTNAGNGNVGFLNFGSGNLGSNNFGSGNFGSNNIGSGNLGSSNIGPGNLGN 290
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G N T G N G +GL N N G+GL N G G N +
Sbjct: 291 SN-----IGFGNAGTSNTGFANIGIGNIGLANIGNNNVGIGLTGNNQVGFGGLNSGANNI 345
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 188
GL N G +G N TG G+ N NTGG NTG + NTG + + NT
Sbjct: 346 GLFNSGNGNIGFFNSGTGNFGIGNSGSYNTGGWNTGQANTGFFNAGSFNTGSFNVGDANT 405
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
G + NTG + NTG + NTG + + NTG + + N
Sbjct: 406 GMFNPGSYNTGDANPGSTNTGSFNTGDTNTGFVNSGDINTGAFNVGDMN 454
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 93/223 (41%), Gaps = 10/223 (4%)
Query: 24 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 83
N G +G N G +G N +G LG N +G G N +G LG N G LG
Sbjct: 231 ANLGVGNVGFTNAGNGNVGFLNFGSGNLGSNNFGSGNFGSNNIGSGNLGSSNIGPGNLGN 290
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 141
N +G N T G N G +GL N N G+GL N G G N +
Sbjct: 291 SN-----IGFGNAGTSNTGFANIGIGNIGLANIGNNNVGIGLTGNNQVGFGGLNSGANNI 345
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
GL N G +G N TG G+ N NTGG NTG + NTG + + NT
Sbjct: 346 GLFNSGNGNIGFFNSGTGNFGIGNSGSYNTGGWNTGQANTGFFNAGSFNTGSFNVGDANT 405
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G + NTG + NTG + NTG + + NTG
Sbjct: 406 GMFNPGSYNTGDANPGSTNTGSFNTGDTNTGFVNSGDINTGAF 448
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 103/271 (38%), Gaps = 20/271 (7%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-----GLRNC 66
G N G +G N +G LG N +G G N +G LG N G L G N
Sbjct: 239 GFTNAGNGNVGFLNFGSGNLGSNNFGSGNFGSNNIGSGNLGSSNIGPGNLGNSNIGFGNA 298
Query: 67 NTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
T G N G +GL N N G+GL N G G N +GL N G +G
Sbjct: 299 GTSNTGFANIGIGNIGLANIGNNNVGIGLTGNNQVGFGGLNSGANNIGLFNSGNGNIGFF 358
Query: 125 NCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
N TG G+ N NTGG NTG + NTG + + NTG + NTG
Sbjct: 359 NSGTGNFGIGNSGSYNTGGWNTGQANTGFFNAGSFNTGSFNVGDANTGMFNPGSYNTGDA 418
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--------CNTGGLGL 233
+ NTG + NTG + + NTG + + N N T + L
Sbjct: 419 NPGSTNTGSFNTGDTNTGFVNSGDINTGAFNVGDMNNAFFATANGQGGLTFTFTTPDITL 478
Query: 234 RNCNTGGLIVPKSKRGAQENASRSENEPCLV 264
G+ VP E S P +V
Sbjct: 479 PPIEIPGISVPAFDL--PEITVPSITIPPIV 507
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 86/229 (37%), Gaps = 7/229 (3%)
Query: 9 STKGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
S G N G +GL N N G+GL N G G N +GL N G +G N
Sbjct: 301 SNTGFANIGIGNIGLANIGNNNVGIGLTGNNQVGFGGLNSGANNIGLFNSGNGNIGFFNS 360
Query: 67 NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
TG G+ N NTGG NTG + NTG + + NTG + NTG
Sbjct: 361 GTGNFGIGNSGSYNTGGWNTGQANTGFFNAGSFNTGSFNVGDANTGMFNPGSYNTGDANP 420
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ NTG + NTG + + NTG + + N N GGL T + L
Sbjct: 421 GSTNTGSFNTGDTNTGFVNSGDINTGAFNVGDMNNAFFATANGQ-GGLTFT-FTTPDITL 478
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
G+ + + + + + + L GG + G
Sbjct: 479 PPIEIPGISVPAFDLPEITVPSITIPPIVLPATAVGGFFTPRIDIPSFG 527
>gi|167967605|ref|ZP_02549882.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 2255
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 1434 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 1490
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 1491 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 1550
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 1551 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 1605
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 1606 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 1662
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1010 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1069
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1070 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1129
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1130 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1189
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 1190 YNTGIANTGDVSTGAFI 1206
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1010 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1069
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1070 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1129
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1130 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1189
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 1190 YNTGIANTGDVSTGAF 1205
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 1449 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 1508
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 1509 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1568
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 1569 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 1628
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 1629 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 1685
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 1686 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 1715
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 1898 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 1957
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 1958 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2017
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2018 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 2077
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 2078 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 2137
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 2138 TGAFITGSYSNG 2149
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 1919 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 1978
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 1979 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2038
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2039 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 2098
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 2099 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 2157
Query: 249 G 249
G
Sbjct: 2158 G 2158
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 130 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 189
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 190 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 244
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 245 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 304
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 305 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 359
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 1882 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 1941
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 1942 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2001
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2002 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2061
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2062 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 2121
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA S S
Sbjct: 2122 NTGDYNTGVANTGDVDTGAFITGSYS 2147
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 146 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 202
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 203 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 260
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 261 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 320
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 321 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 358
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 160 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 219
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 220 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 279
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 280 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 339
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 340 IGNYNTGIANTGDVDTGAF 358
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 1879 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 1938
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 1939 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 1998
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 1999 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2058
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2059 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 2111
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 541 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 597
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 598 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 657
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 658 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 717
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 718 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 777
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 778 SFNPGDSNTGDF 789
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 553 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 612
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 613 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 672
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 673 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 732
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 733 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 792
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 793 SYNTGLGNTGDVDTGAFI 810
>gi|57116719|ref|YP_177714.1| PPE family protein PPE5 [Mycobacterium tuberculosis H37Rv]
gi|289760413|ref|ZP_06519791.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|397672095|ref|YP_006513630.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|7478698|pir||A70524 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
gi|289707919|gb|EFD71935.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|395137000|gb|AFN48159.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444893780|emb|CCP43034.1| PPE family protein PPE5 [Mycobacterium tuberculosis H37Rv]
Length = 2204
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 1383 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 1439
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 1440 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 1499
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 1500 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 1554
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 1555 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 1611
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 959 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1018
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1019 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1078
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1079 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1138
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 1139 YNTGIANTGDVSTGAFI 1155
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 959 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1018
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1019 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1078
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1079 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1138
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 1139 YNTGIANTGDVSTGAF 1154
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 1398 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 1457
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 1458 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1517
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 1518 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 1577
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 1578 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 1634
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 1635 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 1664
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 1847 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 1906
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 1907 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 1966
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 1967 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 2026
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 2027 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 2086
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 2087 TGAFITGSYSNG 2098
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 1868 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 1927
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 1928 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 1987
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 1988 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 2047
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 2048 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 2106
Query: 249 G 249
G
Sbjct: 2107 G 2107
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 79 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 138
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 139 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 193
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 194 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 253
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 254 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 308
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 1831 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 1890
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 1891 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 1950
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 1951 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2010
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2011 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 2070
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA S S
Sbjct: 2071 NTGDYNTGVANTGDVDTGAFITGSYS 2096
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 95 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 151
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 152 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 209
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 210 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 269
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 270 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 307
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 109 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 168
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 169 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 228
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 229 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 288
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 289 IGNYNTGIANTGDVDTGAF 307
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 1828 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 1887
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 1888 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 1947
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 1948 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2007
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2008 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 2060
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 490 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 546
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 547 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 606
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 607 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 666
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 667 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 726
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 727 SFNPGDSNTGDF 738
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 502 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 561
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 562 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 621
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 622 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 681
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 682 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 741
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 742 SYNTGLGNTGDVDTGAFI 759
>gi|424948987|ref|ZP_18364683.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
gi|358233502|dbj|GAA46994.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
Length = 1941
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1237 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1296
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1297 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1353
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1354 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1413
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1414 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1452
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 635 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 694
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 695 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 749
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 750 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 809
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 810 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 865
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1239 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1293
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1294 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1350
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1351 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1410
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1411 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1444
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 620 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 676
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 677 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 732
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 733 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 791
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 792 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 851
Query: 236 CNTGGL 241
NTG
Sbjct: 852 INTGWF 857
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1307 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1366
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1367 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1426
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1427 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1485
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1486 IPQFPIRITTTGGIG 1500
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1310 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1369
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1370 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1429
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1430 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1488
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1489 FPIRITTTGGIG 1500
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 678 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 737
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 738 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 797
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 798 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 857
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 858 NTGHANT---GLANAGTFGTG 875
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 140 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 199
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 200 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 259
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 260 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 307
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 140 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 199
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 200 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 259
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 260 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 311
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 140 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 199
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 200 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 259
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 260 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 311
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 530 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 588
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 589 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 648
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 649 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 708
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 709 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 768
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 769 SGIGNIGLFNSGTGNVGFFNSGTG 792
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 72 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 131
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 132 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 191
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 192 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 251
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 252 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 296
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 141 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 200
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 201 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 260
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 261 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 311
>gi|156357622|ref|XP_001624314.1| predicted protein [Nematostella vectensis]
gi|156211084|gb|EDO32214.1| predicted protein [Nematostella vectensis]
Length = 128
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG+ N ++ LG N ++ LG N ++ LG N ++ LG + NTG L NTG
Sbjct: 5 LGVHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAPH-NTGSPSLGAHNTGS 63
Query: 81 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNC 136
L L NTG LG N ++ LG + NTG L NTG L L NTG LG N
Sbjct: 64 LSLGAHNTGSPSLGAHNTDSPSLGAPH-NTGSPSLGAHNTGSLSLGAHNTGSPSLGAHNT 122
Query: 137 NTGGLG 142
++ LG
Sbjct: 123 DSPSLG 128
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
LG+ N ++ LG N ++ LG N ++ LG N ++ LG + NTG L NTG
Sbjct: 5 LGVHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAPH-NTGSPSLGAHNTGS 63
Query: 131 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNC 186
L L NTG LG N ++ LG + NTG L NTG L L NTG LG N
Sbjct: 64 LSLGAHNTGSPSLGAHNTDSPSLGAPH-NTGSPSLGAHNTGSLSLGAHNTGSPSLGAHNT 122
Query: 187 NTGGLG 192
++ LG
Sbjct: 123 DSPSLG 128
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
LG+ N ++ LG N ++ LG N ++ LG N ++ LG + NTG L NTG
Sbjct: 5 LGVHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAPH-NTGSPSLGAHNTGS 63
Query: 181 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNC 236
L L NTG LG N ++ LG + NTG L NTG L L NTG LG N
Sbjct: 64 LSLGAHNTGSPSLGAHNTDSPSLGAPH-NTGSPSLGAHNTGSLSLGAHNTGSPSLGAHNT 122
Query: 237 NTGGL 241
++ L
Sbjct: 123 DSPSL 127
>gi|289571586|ref|ZP_06451813.1| predicted protein [Mycobacterium tuberculosis T17]
gi|289545340|gb|EFD48988.1| predicted protein [Mycobacterium tuberculosis T17]
Length = 845
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 140 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 199
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 200 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 256
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 257 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 316
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 317 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 355
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 142 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 196
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 197 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 253
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 254 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 313
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 314 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 347
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 210 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 269
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 270 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 329
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 330 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 388
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 389 IPQFPIRITTTGGIG 403
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 213 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 272
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 273 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 332
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 333 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 391
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 392 FPIRITTTGGIG 403
>gi|440582843|emb|CCG13246.1| PPE family protein [Mycobacterium tuberculosis 7199-99]
Length = 2088
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1362 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1421
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1422 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1478
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1479 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1538
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1539 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1577
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 760 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 819
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 820 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 874
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 875 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 934
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 935 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 990
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1364 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1418
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1419 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1475
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1476 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1535
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1536 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1569
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 745 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 801
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 802 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 857
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 858 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 916
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 917 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 976
Query: 236 CNTGGL 241
NTG
Sbjct: 977 INTGWF 982
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1551
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1552 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1610
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1611 IPQFPIRITTTGGIG 1625
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1435 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1494
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1495 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1554
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1555 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1613
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1614 FPIRITTTGGIG 1625
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 803 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 862
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 863 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 922
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 923 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 982
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 983 NTGHANT---GLANAGTFGTG 1000
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 432
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 655 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 713
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 714 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 773
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 774 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 833
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 834 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 893
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 894 SGIGNIGLFNSGTGNVGFFNSGTG 917
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 197 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 256
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 257 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 316
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 317 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 376
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 377 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 421
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 266 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 325
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 326 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 385
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 386 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 436
>gi|449282265|gb|EMC89128.1| hypothetical protein A306_01931 [Columba livia]
Length = 206
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 66/182 (36%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
GG +TG G G +TGG G GG G +TGG G +T
Sbjct: 2 GGHTWSQMDTGEHGWTWVTVGCSRWSWMDTGGPGWTWVIMGGPGWSRMDTGGSGWSWMDT 61
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
GG GG G + GG G +TGG G GG TG G
Sbjct: 62 GGPRWTWVIMGGPGWSRMDMGGPGWSRVDTGGHGWTRVVMGGHEWTQVVTGEHGWSWVVM 121
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
G G +TGG G G NTGG G +TGG G TG G +T
Sbjct: 122 DGHGWSRMDTGGHRRTRVVMDGHGWTQENTGGPGWSRMDTGGHGWTRVVTGDHGWSWMDT 181
Query: 199 GG 200
GG
Sbjct: 182 GG 183
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 66/182 (36%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
GG +TG G G +TGG G GG G +TGG G +T
Sbjct: 2 GGHTWSQMDTGEHGWTWVTVGCSRWSWMDTGGPGWTWVIMGGPGWSRMDTGGSGWSWMDT 61
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
GG GG G + GG G +TGG G GG TG G
Sbjct: 62 GGPRWTWVIMGGPGWSRMDMGGPGWSRVDTGGHGWTRVVMGGHEWTQVVTGEHGWSWVVM 121
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
G G +TGG G G NTGG G +TGG G TG G +T
Sbjct: 122 DGHGWSRMDTGGHRRTRVVMDGHGWTQENTGGPGWSRMDTGGHGWTRVVTGDHGWSWMDT 181
Query: 209 GG 210
GG
Sbjct: 182 GG 183
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 66/182 (36%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
GG +TG G G +TGG G GG G +TGG G +T
Sbjct: 2 GGHTWSQMDTGEHGWTWVTVGCSRWSWMDTGGPGWTWVIMGGPGWSRMDTGGSGWSWMDT 61
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
GG GG G + GG G +TGG G GG TG G
Sbjct: 62 GGPRWTWVIMGGPGWSRMDMGGPGWSRVDTGGHGWTRVVMGGHEWTQVVTGEHGWSWVVM 121
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 218
G G +TGG G G NTGG G +TGG G TG G +T
Sbjct: 122 DGHGWSRMDTGGHRRTRVVMDGHGWTQENTGGPGWSRMDTGGHGWTRVVTGDHGWSWMDT 181
Query: 219 GG 220
GG
Sbjct: 182 GG 183
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 59/155 (38%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
+TGG G GG G +TGG G +TGG GG G + GG G
Sbjct: 29 MDTGGPGWTWVIMGGPGWSRMDTGGSGWSWMDTGGPRWTWVIMGGPGWSRMDMGGPGWSR 88
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+TGG G GG TG G G G +TGG G G
Sbjct: 89 VDTGGHGWTRVVMGGHEWTQVVTGEHGWSWVVMDGHGWSRMDTGGHRRTRVVMDGHGWTQ 148
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
NTGG G +TGG G TG G +TGG
Sbjct: 149 ENTGGPGWSRMDTGGHGWTRVVTGDHGWSWMDTGG 183
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 51/140 (36%), Gaps = 10/140 (7%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G +TGG G +TGG GG G + GG G +TGG G GG
Sbjct: 44 PGWSRMDTGGSGWSWMDTGGPRWTWVIMGGPGWSRMDMGGPGWSRVDTGGHGWTRVVMGG 103
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL----------GLRNCNTGGLGLRNCNTGG 120
TG G G G +TGG G NTGG G +TGG
Sbjct: 104 HEWTQVVTGEHGWSWVVMDGHGWSRMDTGGHRRTRVVMDGHGWTQENTGGPGWSRMDTGG 163
Query: 121 LGLRNCNTGGLGLRNCNTGG 140
G TG G +TGG
Sbjct: 164 HGWTRVVTGDHGWSWMDTGG 183
>gi|308376358|ref|ZP_07668254.1| hypothetical protein TMHG_03315 [Mycobacterium tuberculosis SUMu008]
gi|308351333|gb|EFP40184.1| hypothetical protein TMHG_03315 [Mycobacterium tuberculosis SUMu008]
Length = 2271
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 1450 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 1506
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 1507 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 1566
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 1567 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 1621
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 1622 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 1678
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1026 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1085
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1086 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1145
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1146 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1205
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 1206 YNTGIANTGDVSTGAFI 1222
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1026 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1085
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1086 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1145
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1146 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1205
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 1206 YNTGIANTGDVSTGAF 1221
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 1465 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 1524
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 1525 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1584
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 1585 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 1644
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 1645 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 1701
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 1702 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 1731
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 1914 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 1973
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 1974 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2033
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2034 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 2093
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 2094 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 2153
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 2154 TGAFITGSYSNG 2165
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 1935 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 1994
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 1995 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2054
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2055 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 2114
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 2115 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 2173
Query: 249 G 249
G
Sbjct: 2174 G 2174
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 146 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 205
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 206 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 260
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 261 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 320
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 321 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 375
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 1898 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 1957
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 1958 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2017
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2018 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2077
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2078 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 2137
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA S S
Sbjct: 2138 NTGDYNTGVANTGDVDTGAFITGSYS 2163
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 162 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 218
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 219 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 276
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 277 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 336
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 337 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 374
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 176 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 235
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 236 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 295
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 296 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 355
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 356 IGNYNTGIANTGDVDTGAF 374
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 1895 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 1954
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 1955 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2014
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2015 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2074
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2075 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 2127
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 557 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 613
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 614 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 673
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 674 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 733
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 734 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 793
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 794 SFNPGDSNTGDF 805
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 569 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 628
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 629 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 688
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 689 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 748
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 749 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 808
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 809 SYNTGLGNTGDVDTGAFI 826
>gi|308231517|ref|ZP_07663877.1| hypothetical protein TMAG_03673 [Mycobacterium tuberculosis SUMu001]
gi|308216993|gb|EFO76392.1| hypothetical protein TMAG_03673 [Mycobacterium tuberculosis SUMu001]
Length = 2271
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 1450 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 1506
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 1507 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 1566
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NT G+G NTG + +
Sbjct: 1567 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNT-GVG----NTGSINTGS 1621
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG L + NTG + NTG + NTG N NTG I
Sbjct: 1622 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 1678
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1026 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1085
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1086 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1145
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1146 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1205
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 1206 YNTGIANTGDVSTGAFI 1222
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1026 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1085
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1086 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1145
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1146 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1205
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 1206 YNTGIANTGDVSTGAF 1221
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 1465 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 1524
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 1525 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1584
Query: 127 NTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ GL N + GL N NTG + + NTG + NTG L + NT
Sbjct: 1585 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNT 1644
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G + NTG + NTG N NTG + + G R G +GL
Sbjct: 1645 GSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT-- 1701
Query: 239 GGLIVPKSKRGAQENASRSENEPCL-VKIKFTPN 271
+ +P+ + + S + P + TPN
Sbjct: 1702 --ITIPEIPY--RYDLSVPIDIPITGTVVATTPN 1731
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 1914 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 1973
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 1974 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2033
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2034 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 2093
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 2094 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 2153
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 2154 TGAFITGSYSNG 2165
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 1935 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 1994
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 1995 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2054
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2055 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 2114
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 2115 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 2173
Query: 249 G 249
G
Sbjct: 2174 G 2174
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 146 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 205
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 206 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 260
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 261 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 320
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 321 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 375
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 1898 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 1957
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 1958 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2017
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2018 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2077
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2078 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 2137
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA S S
Sbjct: 2138 NTGDYNTGVANTGDVDTGAFITGSYS 2163
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 162 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 218
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 219 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 276
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 277 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 336
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 337 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 374
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 176 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 235
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 236 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 295
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 296 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 355
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 356 IGNYNTGIANTGDVDTGAF 374
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 1895 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 1954
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 1955 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2014
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2015 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2074
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2075 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 2127
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 557 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 613
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 614 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 673
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 674 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 733
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 734 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 793
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 794 SFNPGDSNTGDF 805
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 569 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 628
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 629 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 688
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 689 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 748
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 749 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 808
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 809 SYNTGLGNTGDVDTGAFI 826
>gi|289571585|ref|ZP_06451812.1| predicted protein [Mycobacterium tuberculosis T17]
gi|289545339|gb|EFD48987.1| predicted protein [Mycobacterium tuberculosis T17]
Length = 1077
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 93/220 (42%), Gaps = 12/220 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 430 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 489
Query: 67 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 122
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 490 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 544
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N G +GL N TG +G N TG G+ N + G+ N TG GL N + G
Sbjct: 545 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTG 604
Query: 183 LRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ N NTG + NTGG NTG + NTG
Sbjct: 605 VANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 644
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 92/216 (42%), Gaps = 12/216 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 78
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 434 IGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTA 493
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNC 136
G GL N G G N G+RN +GL N TG G+GL N G+G N
Sbjct: 494 GAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNS 548
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +GL N TG +G N TG G+ N + G+ N TG GL N + G+ N
Sbjct: 549 GAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 608
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG NTG + NTG
Sbjct: 609 GSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 644
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ P GL N G L + G L +GL + +G N LG
Sbjct: 399 PLGTPAVLSGLGNV---GHQLSGVSAAGTALNQIPILNIGLADVGNFNVGFGNVGDVNLG 455
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N TG LG N G +G N G GL N G G N
Sbjct: 456 AANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNSGLTAGAAGLGNTGFGNAGSANYGFAN 515
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G+RN +GL N TG G+GL N G+G N G +GL N TG +G N T
Sbjct: 516 QGVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 570
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 235
G G+ N + G+ N TG GL N + G+ N NTG + NTGG
Sbjct: 571 GNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGT 630
Query: 236 CNTGGL 241
NTG
Sbjct: 631 INTGWF 636
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 96/234 (41%), Gaps = 13/234 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 66
G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 370 SGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQI 429
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 430 PILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGNS 489
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 182
G GL N G G N G+RN +GL N TG G+GL N G+G
Sbjct: 490 GLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGIG 544
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G +GL N TG +G N TG G+ N + G+ N TG GL N
Sbjct: 545 GLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 598
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 85
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 369 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 428
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 429 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 488
Query: 146 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 201
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 489 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 543
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N G +GL N TG +G N TG G+ N
Sbjct: 544 GGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNS 578
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 85/208 (40%), Gaps = 13/208 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRN 95
G G+ N T G G+ N +G G+ N + LG +G G L + G L
Sbjct: 369 GSGVLNVGTLGSGVLNVGSGVSGIYNTSVLPLGTPAVLSGLGNVGHQLSGVSAAGTALNQ 428
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+GL + +G N LG N LGL N TG LG N G +G N
Sbjct: 429 IPILNIGLADVGNFNVGFGNVGDVNLGAANLGAQNLGLGNVGTGNLGFANVGHGNIGFGN 488
Query: 156 C--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 211
G GL N G G N G+RN +GL N TG G+GL N G+
Sbjct: 489 SGLTAGAAGLGNTGFGNAGSANYGFANQGVRN-----IGLANTGTGNIGIGLVGDNLTGI 543
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G N G +GL N TG +G N TG
Sbjct: 544 GGLNSGAGNIGLFNSGTGNIGFFNSGTG 571
>gi|289445845|ref|ZP_06435589.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289418803|gb|EFD16004.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 982
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 106/255 (41%), Gaps = 26/255 (10%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNC---NTGGL--GLRNCNTGGLG 52
+ GL N +T L N+G GL N N GG G+ N LG
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
N G LG N LG + + +G N + LG N +G N + +G
Sbjct: 637 DYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIG 691
Query: 113 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N G
Sbjct: 692 IGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGN 751
Query: 171 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G+ N + GL N NTG L + NTG + + NTGG N NTG + N
Sbjct: 752 FGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYN 811
Query: 228 TGGLGLRNCNTGGLI 242
TG N NTG I
Sbjct: 812 TGMANTGNINTGAFI 826
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 109/262 (41%), Gaps = 20/262 (7%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G+ N LG N G LG N LG + + +G N + LG N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNN 679
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N T
Sbjct: 680 IGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGT 739
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 740 GNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGN 799
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
NTG + NTG N NTG + ++ GL R N G + L G+ +P+
Sbjct: 800 YNTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAI----GVDIPE 854
Query: 246 SKRGAQENASRSENEPCLVKIK 267
S N P + I
Sbjct: 855 IPI-----VSVDVNIPIHIPIT 871
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 86/199 (43%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N +G N LG + + +G N + LG N +G N
Sbjct: 627 IFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIG 686
Query: 68 TGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N
Sbjct: 687 SNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGN 746
Query: 126 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 747 SGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFN 806
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 807 TGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFI 396
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 128
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 185
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
>gi|428219102|ref|YP_007103567.1| pentapeptide repeat-containing protein [Pseudanabaena sp. PCC 7367]
gi|427990884|gb|AFY71139.1| pentapeptide repeat protein [Pseudanabaena sp. PCC 7367]
Length = 698
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 76/236 (32%), Gaps = 10/236 (4%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A S L N + G L N G L N G L N + L N G L
Sbjct: 214 ANFSNANLNNFDLSGFDLSGVNLSGANLSGANLSGANLSEANLSEVDLYQINLSGANLSR 273
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ G L N G L N L N + G L N G L N G L N
Sbjct: 274 IDLTGANLSGANFSGANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSGANLSGANLNN 333
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-----LGLRNCNTGG 180
+ G LR N G L N G L N + L N G + L N G
Sbjct: 334 FDLSGFDLRGINLSGADLGGTNLSGANLSEANLSEVDLYQINLSGANLSRIDLTGANLTG 393
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
L N + L N G L N G L GG L+N N G LR
Sbjct: 394 ANLSEANLNEVDLYQINLSGANLSKVNFQGFDL-----GGFDLKNVNLTGANLREV 444
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 71/230 (30%), Gaps = 10/230 (4%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G+ L N G N N L N + G L N G N G+ L
Sbjct: 124 ANLSGVNLSRVNLSGANFSNAN-----LNNFDLSGFDLTGANLTGANFSGVNLSGVNLSR 178
Query: 76 CNTGGLGLRNCN-----TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
N G N N G L N G L N L N + G L N G
Sbjct: 179 ANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSGANFSNANLNNFDLSGFDLSGVNLSG 238
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
L N G L N + L N G L + G L N G L N
Sbjct: 239 ANLSGANLSGANLSEANLSEVDLYQINLSGANLSRIDLTGANLSGANFSGANLSGANFSN 298
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L N + G L N G L N G L N + G LR N G
Sbjct: 299 ANLNNFDLSGFDLSGVNLSGANLSGANLSGANLNNFDLSGFDLRGINLSG 348
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 74/232 (31%), Gaps = 10/232 (4%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A S L N + G L N G N G+ L N G N N L N
Sbjct: 139 ANFSNANLNNFDLSGFDLTGANLTGANFSGVNLSGVNLSRANLSGANFSNAN-----LNN 193
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ G L N G L N L N + G L N G L N G L
Sbjct: 194 FDLSGFDLSGVNLSGANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSGANLSGANLSE 253
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N + L N G L + G L N G L N L N + G L
Sbjct: 254 ANLSEVDLYQINLSGANLSRIDLTGANLSGANFSGANLSGANFSNANLNNFDLSGFDLSG 313
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
N G L N G L N + G LR G+ L + GG L N
Sbjct: 314 VNLSGANLSGANLSGANLNNFDLSGFDLR-----GINLSGADLGGTNLSGAN 360
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 76/240 (31%), Gaps = 5/240 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A S L N + G L N G L N L N + G L N G L
Sbjct: 184 ANFSNANLNNFDLSGFDLSGVNLSGANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSG 243
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
N G L N + L N G L + G L N G L N L N
Sbjct: 244 ANLSGANLSEANLSEVDLYQINLSGANLSRIDLTGANLSGANFSGANLSGANFSNANLNN 303
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
+ G L N G L N G L N + G LR G+ L + GG L
Sbjct: 304 FDLSGFDLSGVNLSGANLSGANLSGANLNNFDLSGFDLR-----GINLSGADLGGTNLSG 358
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
N L + + L N + L N G L N + L N G + K
Sbjct: 359 ANLSEANLSEVDLYQINLSGANLSRIDLTGANLTGANLSEANLNEVDLYQINLSGANLSK 418
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 71/225 (31%), Gaps = 10/225 (4%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N L N + G L N G N G+ L N G N N L N
Sbjct: 139 ANFSNANLNNFDLSGFDLTGANLTGANFSGVNLSGVNLSRANLSGANFSNAN-----LNN 193
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+ G L N G L N L N + G L N G L N G L
Sbjct: 194 FDLSGFDLSGVNLSGANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSGANLSGANLSE 253
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
N + L N G L + G L N G L N L N + G L
Sbjct: 254 ANLSEVDLYQINLSGANLSRIDLTGANLSGANFSGANLSGANFSNANLNNFDLSGFDLSG 313
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
N G L N G L N + G LR G+ L + GG
Sbjct: 314 VNLSGANLSGANLSGANLNNFDLSGFDLR-----GINLSGADLGG 353
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 71/228 (31%), Gaps = 5/228 (2%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
LR N G+ L N G L N G L N + L N L N + G
Sbjct: 96 LRGVNLSGVNLSGANLSGANLSGANLSGANLSGVNLSRVNLSGANFSNANLNNFDLSGFD 155
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N G N G+ L N G N N L N + G L N G
Sbjct: 156 LTGANLTGANFSGVNLSGVNLSRANLSGANFSNAN-----LNNFDLSGFDLSGVNLSGAN 210
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
L N L N + G L N G L N G L N + L N G
Sbjct: 211 LSGANFSNANLNNFDLSGFDLSGVNLSGANLSGANLSGANLSEANLSEVDLYQINLSGAN 270
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L + G L N G L N L N + G L N G
Sbjct: 271 LSRIDLTGANLSGANFSGANLSGANFSNANLNNFDLSGFDLSGVNLSG 318
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 70/231 (30%), Gaps = 10/231 (4%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L N G+ L N G N N L N + G L N G
Sbjct: 114 ANLSGANLSGANLSGVNLSRVNLSGANFSNAN-----LNNFDLSGFDLTGANLTGANFSG 168
Query: 76 CNTGGLGLRNCNTGGLGLRNCN-----TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
N G+ L N G N N G L N G L N L N + G
Sbjct: 169 VNLSGVNLSRANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSGANFSNANLNNFDLSG 228
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
L N G L N G L N + L N G L + G L N G
Sbjct: 229 FDLSGVNLSGANLSGANLSGANLSEANLSEVDLYQINLSGANLSRIDLTGANLSGANFSG 288
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
L N L N + G L N G L N G L N + G
Sbjct: 289 ANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSGANLSGANLNNFDLSGF 339
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 70/229 (30%), Gaps = 5/229 (2%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N G LR N G+ L N G L N G L N + L N
Sbjct: 86 FSKANLRGANLRGVNLSGVNLSGANLSGANLSGANLSGANLSGVNLSRVNLSGANFSNAN 145
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N + G L N G N G+ L N G N N L N + G
Sbjct: 146 LNNFDLSGFDLTGANLTGANFSGVNLSGVNLSRANLSGANFSNAN-----LNNFDLSGFD 200
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
L N G L N L N + G L N G L N G L N +
Sbjct: 201 LSGVNLSGANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSGANLSGANLSEANLSEVD 260
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
L N G L + G L N G L N L N + G
Sbjct: 261 LYQINLSGANLSRIDLTGANLSGANFSGANLSGANFSNANLNNFDLSGF 309
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 72/230 (31%), Gaps = 5/230 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S L N L N + G L N G L N L N + G L N
Sbjct: 176 LSRANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSGANFSNANLNNFDLSGFDLSGVN 235
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G L N G L N + L N G L + G L N G L N
Sbjct: 236 LSGANLSGANLSGANLSEANLSEVDLYQINLSGANLSRIDLTGANLSGANFSGANLSGAN 295
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
L N + G L N G L N G L N + G LR G+ L +
Sbjct: 296 FSNANLNNFDLSGFDLSGVNLSGANLSGANLSGANLNNFDLSGFDLR-----GINLSGAD 350
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
GG L N L + + L N + L N G L N
Sbjct: 351 LGGTNLSGANLSEANLSEVDLYQINLSGANLSRIDLTGANLTGANLSEAN 400
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 74/235 (31%), Gaps = 5/235 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A +S ++ G LR + G L N G L N G N G LR
Sbjct: 39 ANLSEAYVKRAYLRGADLRGADLTGANLTGANLTGANLTGANLTGANFSKANLRGANLRG 98
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
N G+ L N G L N G L N + L N L N + G L
Sbjct: 99 VNLSGVNLSGANLSGANLSGANLSGANLSGVNLSRVNLSGANFSNANLNNFDLSGFDLTG 158
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G N G+ L N G N N L N + G L N G L
Sbjct: 159 ANLTGANFSGVNLSGVNLSRANLSGANFSNAN-----LNNFDLSGFDLSGVNLSGANLSG 213
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
N L N + G L N G L N G L N + L N G
Sbjct: 214 ANFSNANLNNFDLSGFDLSGVNLSGANLSGANLSGANLSEANLSEVDLYQINLSG 268
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 68/222 (30%), Gaps = 5/222 (2%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G N G LR N G+ L N G L N G L N + L
Sbjct: 79 ANLTGANFSKANLRGANLRGVNLSGVNLSGANLSGANLSGANLSGANLSGVNLSRVNLSG 138
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N L N + G L N G N G+ L N G N N L N
Sbjct: 139 ANFSNANLNNFDLSGFDLTGANLTGANFSGVNLSGVNLSRANLSGANFSNAN-----LNN 193
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
+ G L N G L N L N + G L N G L N G L
Sbjct: 194 FDLSGFDLSGVNLSGANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSGANLSGANLSE 253
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
N + L N G L + G L N G L N
Sbjct: 254 ANLSEVDLYQINLSGANLSRIDLTGANLSGANFSGANLSGAN 295
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 69/222 (31%), Gaps = 5/222 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
LR + G L N G L N G N G LR N G+ L N G
Sbjct: 55 DLRGADLTGANLTGANLTGANLTGANLTGANFSKANLRGANLRGVNLSGVNLSGANLSGA 114
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
L N G L N + L N L N + G L N G N G+
Sbjct: 115 NLSGANLSGANLSGVNLSRVNLSGANFSNANLNNFDLSGFDLTGANLTGANFSGVNLSGV 174
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
L N G N N L N + G L N G L N L N + G
Sbjct: 175 NLSRANLSGANFSNAN-----LNNFDLSGFDLSGVNLSGANLSGANFSNANLNNFDLSGF 229
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
L N G L N G L N + L N G L
Sbjct: 230 DLSGVNLSGANLSGANLSGANLSEANLSEVDLYQINLSGANL 271
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 68/224 (30%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
N N L N ++ G LR + G L N G L N G
Sbjct: 27 ENVNLSYTNLNEANLSEAYVKRAYLRGADLRGADLTGANLTGANLTGANLTGANLTGANF 86
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
N G LR N G+ L N G L N G L N + L N L
Sbjct: 87 SKANLRGANLRGVNLSGVNLSGANLSGANLSGANLSGANLSGVNLSRVNLSGANFSNANL 146
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N + G L N G N G+ L N G N N L + G+ L
Sbjct: 147 NNFDLSGFDLTGANLTGANFSGVNLSGVNLSRANLSGANFSNANLNNFDLSGFDLSGVNL 206
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
N G N N L + G+ L N G L N
Sbjct: 207 SGANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSGANLSGAN 250
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 66/217 (30%)
Query: 24 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 83
N N L N ++ G LR + G L N G L N G
Sbjct: 27 ENVNLSYTNLNEANLSEAYVKRAYLRGADLRGADLTGANLTGANLTGANLTGANLTGANF 86
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N G LR N G+ L N G L N G L N + L N L
Sbjct: 87 SKANLRGANLRGVNLSGVNLSGANLSGANLSGANLSGANLSGVNLSRVNLSGANFSNANL 146
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
N + G L N G N G+ L N G N N L + G+ L
Sbjct: 147 NNFDLSGFDLTGANLTGANFSGVNLSGVNLSRANLSGANFSNANLNNFDLSGFDLSGVNL 206
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
N G N N L + G+ L N G
Sbjct: 207 SGANLSGANFSNANLNNFDLSGFDLSGVNLSGANLSG 243
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 63/208 (30%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
N N L N ++ G LR + G L N G L N G
Sbjct: 27 ENVNLSYTNLNEANLSEAYVKRAYLRGADLRGADLTGANLTGANLTGANLTGANLTGANF 86
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
N G LR N G+ L N G L N G L N + L N L
Sbjct: 87 SKANLRGANLRGVNLSGVNLSGANLSGANLSGANLSGANLSGVNLSRVNLSGANFSNANL 146
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
N + G L N G N G+ L N G N N L + G+ L
Sbjct: 147 NNFDLSGFDLTGANLTGANFSGVNLSGVNLSRANLSGANFSNANLNNFDLSGFDLSGVNL 206
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N G N N L + G+
Sbjct: 207 SGANLSGANFSNANLNNFDLSGFDLSGV 234
>gi|294995062|ref|ZP_06800753.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|424806783|ref|ZP_18232214.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|326906059|gb|EGE52992.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length = 3181
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 2372 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 2431
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 2432 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 2491
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 2492 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 2551
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 2552 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2588
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 2541
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 2542 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 2587
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2824 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2883
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 2884 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2943
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2944 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3003
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3004 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3063
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3064 TGAFITGSYSNG 3075
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 2559
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 2560 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 2614
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 2615 PEIPY--RYDLSVPIDIPITGTVVATTPN 2641
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2845 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2904
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2905 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2964
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2965 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3024
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3025 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3083
Query: 249 G 249
G
Sbjct: 3084 G 3084
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2808 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2867
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2868 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2927
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2928 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2987
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2988 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3047
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3048 NTGDYNTG 3055
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2805 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2864
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2865 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2924
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2925 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2984
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2985 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3037
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
>gi|298523783|ref|ZP_07011192.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298493577|gb|EFI28871.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 3178
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1938 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1997
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1998 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2057
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2058 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2117
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2118 YNTGIANTGDVSTGAFI 2134
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 2369 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 2428
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 2429 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 2488
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 2489 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 2548
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 2549 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2585
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 574 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 633
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 634 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 693
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 694 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 753
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 754 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 813
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 814 TGNINTGAFI 823
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 623 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 677
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 678 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 737
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 738 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 797
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 798 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 854
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 855 ---VSVDVNIPIHIPIT 868
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2362 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2418
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2419 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2478
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 2479 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 2538
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 2539 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 2584
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1938 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1997
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1998 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2057
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2058 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2117
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2118 YNTGIANTGDVSTGAF 2133
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2377 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2436
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2437 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2496
Query: 127 NTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 2497 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 2556
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 2557 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 2611
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 2612 PEIPY--RYDLSVPIDIPITGTVVATTPN 2638
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2821 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2880
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2881 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2940
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2941 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3000
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3001 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3060
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3061 TGAFITGSYSNG 3072
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 622 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 681
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 682 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 741
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 742 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 801
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 802 FNTGDYNTGMANTGNINTGAF 822
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2842 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2901
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2902 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2961
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2962 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3021
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3022 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3080
Query: 249 G 249
G
Sbjct: 3081 G 3081
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1058 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1117
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1118 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1172
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1173 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1232
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1233 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1287
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 75/169 (44%), Gaps = 10/169 (5%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTG-GLGLRNCN 137
LG N + LGL N +G N + +G N N G+GL TG G G N
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGL----TGNGFGSFNSG 285
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 194
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 286 SHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPG 345
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG N NTG N NTG + NTG N NTG I
Sbjct: 346 SYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 394
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2805 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2864
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2865 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2924
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2925 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2984
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2985 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3044
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3045 NTGDYNTG 3052
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1074 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1130
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1131 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1188
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1189 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1248
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1249 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1286
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTG-GLGLRNCN 77
LG N + LGL N +G N + +G N N G+GL TG G G N
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGL----TGNGFGSFNSG 285
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 134
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 286 SHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPG 345
Query: 135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 346 SYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 392
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTG-GLGLRNCN 87
LG N + LGL N +G N + +G N N G+GL TG G G N
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGL----TGNGFGSFNSG 285
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 144
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 286 SHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPG 345
Query: 145 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 346 SYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 392
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTG-GLGLRNCN 107
LG N + LGL N +G N + +G N N G+GL TG G G N
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGL----TGNGFGSFNSG 285
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 164
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 286 SHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPG 345
Query: 165 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 346 SYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 392
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTG-GLGLRNCN 117
LG N + LGL N +G N + +G N N G+GL TG G G N
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGL----TGNGFGSFNSG 285
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 174
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 286 SHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPG 345
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 346 SYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 392
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTG-GLGLRNCN 127
LG N + LGL N +G N + +G N N G+GL TG G G N
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGL----TGNGFGSFNSG 285
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 286 SHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPG 345
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 346 SYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 392
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1088 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1147
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1148 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1207
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1208 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1267
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1268 IGNYNTGIANTGDVDTGAF 1286
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNC 76
G G N + +GL N +G +GL N TG G+ N TG GL N NTG +
Sbjct: 278 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 337
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
NTGG + NTG N NTG N NTG + NTG N NTG
Sbjct: 338 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 392
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2802 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2861
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2862 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2921
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2922 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2981
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2982 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3034
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1469 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1525
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1526 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1585
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1586 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1645
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1646 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1705
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1706 SFNPGDSNTGDF 1717
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 68
GL N +G +GL N TG G+ N TG GL N NTG + NTGG + NT
Sbjct: 290 GLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNT 349
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
G N NTG N NTG + NTG N NTG
Sbjct: 350 GNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 392
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1481 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1540
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1541 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1600
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1601 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1660
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1661 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1720
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1721 SYNTGLGNTGDVDTGAFI 1738
>gi|73670411|ref|YP_306426.1| hypothetical protein Mbar_A2951 [Methanosarcina barkeri str.
Fusaro]
gi|72397573|gb|AAZ71846.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 286
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 72/215 (33%), Gaps = 15/215 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
L+ + G+ LR N G L N G N G LR N GG LR N GG
Sbjct: 44 LKELSFEGVNLREANLLGANLEKANLLG-----ANLEGADLRETNLGGADLREANLGGAD 98
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
LR N G L G LR N GG LR N GG LR N G LR N
Sbjct: 99 LREANLEGADLE-----GADLRETNLGGADLREANLGGADLREANLEGADLRETN----- 148
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
L N G L N L N G+ L L+ N L N G
Sbjct: 149 LLEANLEGASLEGANLKVANLERANLKGVNLIEAELSWAELKGANLVESYLVGTNFTGAN 208
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
L + L L N G ++ N
Sbjct: 209 LEWVDLTKANLEEAIFTWADLEGANISGANIKGAN 243
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 72/215 (33%), Gaps = 15/215 (6%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L+ + G+ LR N G L N G N G LR N GG LR N GG
Sbjct: 44 LKELSFEGVNLREANLLGANLEKANLLG-----ANLEGADLRETNLGGADLREANLGGAD 98
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
LR N G L G LR N GG LR N GG LR N G LR N
Sbjct: 99 LREANLEGADLE-----GADLRETNLGGADLREANLGGADLREANLEGADLRETN----- 148
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 202
L N G L N L N G+ L L+ N L N G
Sbjct: 149 LLEANLEGASLEGANLKVANLERANLKGVNLIEAELSWAELKGANLVESYLVGTNFTGAN 208
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
L + L L N G ++ N
Sbjct: 209 LEWVDLTKANLEEAIFTWADLEGANISGANIKGAN 243
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 61/160 (38%), Gaps = 15/160 (9%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
L+ + G+ LR N G L N G N G LR N GG LR N GG
Sbjct: 44 LKELSFEGVNLREANLLGANLEKANLLG-----ANLEGADLRETNLGGADLREANLGGAD 98
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
LR N G L G LR N GG LR N GG LR N G LR N
Sbjct: 99 LREANLEGADLE-----GADLRETNLGGADLREANLGGADLREANLEGADLRETN----- 148
Query: 213 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQE 252
L N G L N L N G+ + +++ E
Sbjct: 149 LLEANLEGASLEGANLKVANLERANLKGVNLIEAELSWAE 188
>gi|339630379|ref|YP_004722021.1| PPE family protein, partial [Mycobacterium africanum GM041182]
gi|339329735|emb|CCC25379.1| PPE family protein, partial [Mycobacterium africanum GM041182]
Length = 964
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 106/255 (41%), Gaps = 26/255 (10%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNC---NTGGL--GLRNCNTGGLG 52
+ GL N +T L N+G GL N N GG G+ N LG
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
N G LG N LG + + +G N + LG N +G N + +G
Sbjct: 637 DYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIG 691
Query: 113 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N G
Sbjct: 692 IGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGN 751
Query: 171 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G+ N + GL N NTG L + NTG + + NTGG N NTG + N
Sbjct: 752 FGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYN 811
Query: 228 TGGLGLRNCNTGGLI 242
TG N NTG I
Sbjct: 812 TGMANTGNINTGAFI 826
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 109/262 (41%), Gaps = 20/262 (7%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G+ N LG N G LG N LG + + +G N + LG N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNN 679
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N T
Sbjct: 680 IGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGT 739
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 740 GNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGN 799
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
NTG + NTG N NTG + ++ GL R N G + L G+ +P+
Sbjct: 800 YNTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAI----GVDIPE 854
Query: 246 SKRGAQENASRSENEPCLVKIK 267
S N P + I
Sbjct: 855 IPI-----VSVDVNIPIHIPIT 871
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 86/199 (43%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N +G N LG + + +G N + LG N +G N
Sbjct: 627 IFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIG 686
Query: 68 TGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N
Sbjct: 687 SNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGN 746
Query: 126 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 747 SGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFN 806
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 807 TGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFI 396
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 128
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 185
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
>gi|379029712|dbj|BAL67445.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 2097
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1371 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1430
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1431 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1487
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1488 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1547
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1548 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1586
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 769 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 828
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 829 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 883
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 884 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 943
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 944 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 999
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1373 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1427
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1428 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1484
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1485 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1544
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1545 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1578
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 754 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 810
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 811 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 866
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 867 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 925
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 926 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 985
Query: 236 CNTGGL 241
NTG
Sbjct: 986 INTGWF 991
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1441 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1500
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1501 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1560
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1561 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1619
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1620 IPQFPIRITTTGGIG 1634
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1444 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1503
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1504 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1563
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1564 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1622
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1623 FPIRITTTGGIG 1634
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 812 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 871
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 872 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 931
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 932 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 991
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 992 NTGHANT---GLANAGTFGTG 1009
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 441
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 445
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 445
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 664 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 722
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 723 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 782
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 783 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 842
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 843 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 902
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 903 SGIGNIGLFNSGTGNVGFFNSGTG 926
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 206 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 265
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 266 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 325
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 326 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 385
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 386 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 430
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 275 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 334
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 335 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 394
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 395 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 445
>gi|308231518|ref|ZP_07663878.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308216994|gb|EFO76393.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
Length = 906
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 106/255 (41%), Gaps = 26/255 (10%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNC---NTGGL--GLRNCNTGGLG 52
+ GL N +T L N+G GL N N GG G+ N LG
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
N G LG N LG + + +G N + LG N +G N + +G
Sbjct: 637 DYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIG 691
Query: 113 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N G
Sbjct: 692 IGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGN 751
Query: 171 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G+ N + GL N NTG L + NTG + + NTGG N NTG + N
Sbjct: 752 FGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYN 811
Query: 228 TGGLGLRNCNTGGLI 242
TG N NTG I
Sbjct: 812 TGMANTGNINTGAFI 826
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 86/199 (43%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N +G N LG + + +G N + LG N +G N
Sbjct: 627 IFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIG 686
Query: 68 TGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N
Sbjct: 687 SNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGN 746
Query: 126 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 747 SGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFN 806
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 807 TGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 128
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 185
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
>gi|340625336|ref|YP_004743788.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
gi|433625404|ref|YP_007259033.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140060008]
gi|340003526|emb|CCC42647.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
gi|432153010|emb|CCK50221.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140060008]
Length = 3181
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 2372 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 2431
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 2432 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 2491
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 2492 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 2551
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 2552 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2588
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 2541
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 2542 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 2587
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 2559
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 2560 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 2614
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 2615 PEIPY--RYDLSVPIDIPITGTVVATTPN 2641
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2824 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2883
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2884 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2943
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2944 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3003
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + +TG + +
Sbjct: 3004 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYSTGVANTGDVD 3063
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3064 TGAFITGSYSNG 3075
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2845 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2904
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2905 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2964
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2965 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3024
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + +TG + +TG + + G +V +
Sbjct: 3025 GSFNPGSFNTGGFNPGSGNTGYLNTGDYSTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3083
Query: 249 G 249
G
Sbjct: 3084 G 3084
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 105/240 (43%), Gaps = 9/240 (3%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2808 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2867
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2868 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2927
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2928 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2987
Query: 185 NCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N TG GL N NTG + NTG + NTG + NTGG + NTG L
Sbjct: 2988 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3047
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2805 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2864
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2865 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2924
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2925 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2984
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2985 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3037
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNAGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNAGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
>gi|289752336|ref|ZP_06511714.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289692923|gb|EFD60352.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length = 3181
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 2372 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 2431
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 2432 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 2491
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 2492 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 2551
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 2552 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2588
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 2541
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 2542 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 2587
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 2559
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 2560 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 2614
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 2615 PEIPY--RYDLSVPIDIPITGTVVATTPN 2641
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2824 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2883
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 2884 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2943
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2944 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3003
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3004 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3063
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3064 TGAFITGSYSNG 3075
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2845 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2904
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2905 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2964
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2965 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3024
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3025 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3083
Query: 249 G 249
G
Sbjct: 3084 G 3084
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2808 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2867
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2868 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2927
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2928 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2987
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2988 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3047
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3048 NTGDYNTG 3055
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2805 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2864
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2865 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2924
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2925 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2984
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2985 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3037
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
>gi|289748075|ref|ZP_06507453.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289688603|gb|EFD56091.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 3181
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 2372 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 2431
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 2432 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 2491
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 2492 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 2551
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 2552 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2588
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGNGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 2541
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 2542 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 2587
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGNGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2824 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2883
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 2884 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2943
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2944 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3003
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3004 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3063
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3064 TGAFITGSYSNG 3075
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 2559
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 2560 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 2614
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 2615 PEIPY--RYDLSVPIDIPITGTVVATTPN 2641
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2845 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2904
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2905 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2964
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2965 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3024
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3025 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3083
Query: 249 G 249
G
Sbjct: 3084 G 3084
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2808 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2867
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2868 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2927
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2928 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2987
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2988 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3047
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3048 NTGDYNTG 3055
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2805 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2864
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2865 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2924
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2925 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2984
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2985 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3037
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
>gi|433640434|ref|YP_007286193.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070008]
gi|432156982|emb|CCK54251.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070008]
Length = 3180
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 2372 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 2431
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 2432 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGHGNVGFFNSGTGNVGIGNTGT 2491
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 2492 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 2551
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 2552 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2588
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 102/250 (40%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSFNTGSFNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGFANTGSNN 2000
Query: 111 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N + +G+ TG G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGRIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 106/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSFNTGSFNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGHGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 2541
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 2542 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 2587
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGFANTGSNN 2000
Query: 101 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N + +G+ TG G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGRIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGHGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 2559
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 2560 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 2614
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 2615 PEIPY--RYDLSVPIDIPITGTVVATTPN 2641
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 86/201 (42%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSFNTGSFNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N G +G+ N +G
Sbjct: 2823 VANQGGLNAGIGNLGSVNVGFVNTGDSNLGIGNLGDLNFGGVNIGANNIGIANTGIFDIG 2882
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2883 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2942
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2943 IGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3002
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTGG + NTG + NTG L + NTG + +
Sbjct: 3003 TGIGNAGSTNTGLFNPGDLNTGGFNPGSFNTGSFNPGSGNTGYLNTGDYNTGVANTGDVD 3062
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3063 TGAFITGSYSNG 3074
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 94/214 (43%), Gaps = 6/214 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
+G+ N +GL N + +GL N LG N + +G N + LG N +
Sbjct: 2871 IGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYN 2930
Query: 101 LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N + +GL N +G +G N TG +G+ N T
Sbjct: 2931 IGFANTGNNNIGIGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGT 2990
Query: 159 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G GL N NTG + NTG + NTGG + NTG + NTG L +
Sbjct: 2991 GNFGLANSGGFNTGIGNAGSTNTGLFNPGDLNTGGFNPGSFNTGSFNPGSGNTGYLNTGD 3050
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRG 249
NTG + +TG + + G +V +G
Sbjct: 3051 YNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQG 3083
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 96/235 (40%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNEQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N + +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSNNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 104/248 (41%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
GL NTG L L N GGL G+ N + +G N LG+ N G N
Sbjct: 2807 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNVGFVNTGDSNLGIGNLGDLNFGGVNI 2866
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2867 GANNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2926
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2927 GSYNIGFANTGNNNIGIGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2986
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTGG + NTG + NTG L
Sbjct: 2987 NTGTGNFGLANSGGFNTGIGNAGSTNTGLFNPGDLNTGGFNPGSFNTGSFNPGSGNTGYL 3046
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3047 NTGDYNTG 3054
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 89/218 (40%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N + +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNEQIGFGSFNSGSNNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 82/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N + +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNEQIGFGSFNSGSNNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRN---- 55
+ P GL N +T GL +TG LGL N T +G+ N +G N
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 56 ----CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
N GG +G+ N +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGVANTGIFDIGLANLGSYNIGFGNAGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGNGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 85/216 (39%), Gaps = 11/216 (5%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N+G L + +G GL N G GL N T G N +T L N+G L N
Sbjct: 1439 ANSGFWNLASATSGVSGLLNVGALGSGLANVGTTVSGFYNTSTSDLATPAFNSG---LAN 1495
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+T GL +TG + L LGL N T +G+ N +G N + G N
Sbjct: 1496 ISTSIAGLLRDSTGTMVLN------LGLANHGTLNVGIANLGDYNIGFANLGSANFGSAN 1549
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
+G+ N +GL N + +G N LG N + +G N LG N
Sbjct: 1550 IGGNNIGVANTGIFDIGLANLGSYNIGFGNAGDDNLGFGNLGSYNVGFGNLGNDNLGFAN 1609
Query: 206 CNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 239
+ +G N N G+GL G G N +G
Sbjct: 1610 TGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSG 1645
>gi|289441685|ref|ZP_06431429.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289414604|gb|EFD11844.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 3181
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 2372 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 2431
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG + + N+G +GL N G +G N TG +G+ N T
Sbjct: 2432 IGFANTGSGNIGIGLTGTGQIEFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 2491
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 2492 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 2551
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 2552 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2588
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2824 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2883
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2884 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2943
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2944 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3003
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3004 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3063
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3064 TGAFITGSYSNG 3075
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2845 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2904
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2905 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2964
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2965 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3024
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3025 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3083
Query: 249 G 249
G
Sbjct: 3084 G 3084
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 95/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG + + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIEFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 2541
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 2542 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 2587
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 109/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG + + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIEFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 2559
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 2560 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 2614
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 2615 PEIPY--RYDLSVPIDIPITGTVVATTPN 2641
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 98
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 155
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2808 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2867
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2868 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2927
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2928 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2987
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2988 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3047
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3048 NTGDYNTG 3055
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2805 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2864
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2865 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2924
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2925 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2984
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2985 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3037
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
>gi|289756370|ref|ZP_06515748.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T85]
gi|289711934|gb|EFD75946.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T85]
Length = 963
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 106/255 (41%), Gaps = 26/255 (10%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNC---NTGGL--GLRNCNTGGLG 52
+ GL N +T L N+G GL N N GG G+ N LG
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
N G LG N LG + + +G N + LG N +G N + +G
Sbjct: 637 DYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIG 691
Query: 113 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N G
Sbjct: 692 IGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGN 751
Query: 171 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G+ N + GL N NTG L + NTG + + NTGG N NTG + N
Sbjct: 752 FGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYN 811
Query: 228 TGGLGLRNCNTGGLI 242
TG N NTG I
Sbjct: 812 TGMANTGNINTGAFI 826
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 109/262 (41%), Gaps = 20/262 (7%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G+ N LG N G LG N LG + + +G N + LG N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNN 679
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N T
Sbjct: 680 IGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGT 739
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 740 GNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGN 799
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
NTG + NTG N NTG + ++ GL R N G + L G+ +P+
Sbjct: 800 YNTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAI----GVDIPE 854
Query: 246 SKRGAQENASRSENEPCLVKIK 267
S N P + I
Sbjct: 855 IPI-----VSVDVNIPIHIPIT 871
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 86/199 (43%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N +G N LG + + +G N + LG N +G N
Sbjct: 627 IFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIG 686
Query: 68 TGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N
Sbjct: 687 SNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGN 746
Query: 126 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 747 SGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFN 806
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 807 TGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 73/167 (43%), Gaps = 5/167 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFI 396
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 128
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 185
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
>gi|289748788|ref|ZP_06508166.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289689375|gb|EFD56804.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 3181
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 2000
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 2372 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 2431
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG + + N+G +GL N G +G N TG +G+ N T
Sbjct: 2432 IGFANTGSGNIGIGLTGTGQIEFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 2491
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 2492 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 2551
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 2552 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2588
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 2824 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 2883
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 2884 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 2943
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 2944 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 3003
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 3004 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 3063
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 3064 TGAFITGSYSNG 3075
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 2845 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 2904
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 2905 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 2964
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 2965 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 3024
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3025 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3083
Query: 249 G 249
G
Sbjct: 3084 G 3084
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 95/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG + + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIEFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 2541
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 2542 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 2587
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 109/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 2380 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 2439
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG + + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 2440 GNIGIGLTGTGQIEFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Query: 127 NTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 2500 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 2559
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 2560 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 2614
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 2615 PEIPY--RYDLSVPIDIPITGTVVATTPN 2641
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 98
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 155
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2808 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2867
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 2868 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 2927
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 2928 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2987
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2988 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3047
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3048 NTGDYNTG 3055
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 2805 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 2864
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 2865 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 2924
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 2925 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2984
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2985 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 3037
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
>gi|289747171|ref|ZP_06506549.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289687699|gb|EFD55187.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 2137
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 1433 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 1492
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 1493 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 1549
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1550 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 1609
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 1610 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1648
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGG 60
+ L + G LR+ G LGL N N G + L N GG LGL N G
Sbjct: 831 QQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGN 890
Query: 61 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G LG N G G+ N G G+ N GL N G +G N T
Sbjct: 891 LGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGT 945
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G G+GL + G+G N G +GL N TG +G N TG G+ N G+ N
Sbjct: 946 GNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNS 1005
Query: 177 NTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T GL N + G+ N NTG + NTGG NTG + NTG
Sbjct: 1006 GTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANTG 1061
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 95/214 (44%), Gaps = 13/214 (6%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 1435 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 1489
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 150
N +GL G +GL N + GL N G +GL N TG G+GL G
Sbjct: 1490 FANSGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTG 1546
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 207
+G N +G +GL N TG +G N TG GL N + G+ N TG GL N N
Sbjct: 1547 IGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFN 1606
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
TG + NTG + + NTGG + NTG
Sbjct: 1607 TGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 1640
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 99/246 (40%), Gaps = 15/246 (6%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P P + G+ N G L + G LR+ G LGL N G N LG
Sbjct: 816 PFGTPAAVSGIGNL---GQQLSGVSAAGTTLRSMLAGNLGLANVGNFNTGFGNVGDVNLG 872
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 120
N LGL N G LGL N G LG N G G+ N G G+ N
Sbjct: 873 AANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY---- 928
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GL N G +G N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 929 -GLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGT 987
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N T GL N + G+ N NTG + NTGG
Sbjct: 988 GNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGG 1047
Query: 236 CNTGGL 241
NTG
Sbjct: 1048 INTGWF 1053
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 1503 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1562
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 1563 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 1622
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1623 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 1681
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 1682 IPQFPIRITTTGGIG 1696
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 1506 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 1565
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 1566 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 1625
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 1626 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 1684
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 1685 FPIRITTTGGIG 1696
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNC 66
N GG LGL N G LGL N G LG N G +G N GL N
Sbjct: 874 ANIGGHNLGLGNVGDGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANM 933
Query: 67 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G +G N TG G+GL + G+G N G +GL N TG +G N TG G+
Sbjct: 934 GVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIG 993
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G+ N T GL N + G+ N NTG + NTGG NTG
Sbjct: 994 NSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 1053
Query: 182 GLRNCNTGGLGLRNCNTGGLG 202
+ NT GL N T G G
Sbjct: 1054 NTGHANT---GLANAGTFGTG 1071
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 336 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 395
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 396 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 455
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 456 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 503
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 336 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 395
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 396 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 455
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 456 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 507
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 336 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 395
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 396 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 455
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 456 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 507
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 103/264 (39%), Gaps = 30/264 (11%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-- 61
+ PI+ +GL G+G G N GG+ G N G G N L
Sbjct: 726 IGPITIQGLHIPAAPGVG-NTTTAPSSGFFNSGAGGVSGFGNVGAGSSGWWNQAPSALLG 784
Query: 62 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 114
G+ N T G G+ N +G G N + G +G G L + G LR
Sbjct: 785 AGSGVGNVGTLGSGVLNLGSGISGFYNTSVLPFGTPAAVSGIGNLGQQLSGVSAAGTTLR 844
Query: 115 NCNTGGLGLRNC--------NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 164
+ G LGL N N G + L N GG LGL N G LGL N G LG
Sbjct: 845 SMLAGNLGLANVGNFNTGFGNVGDVNLGAANIGGHNLGLGNVGDGNLGLGNIGHGNLGFA 904
Query: 165 N-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 215
N G +G N GL N G +G N TG G+GL + G+G N
Sbjct: 905 NLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLN 964
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTG 239
G +GL N TG +G N TG
Sbjct: 965 SGIGNIGLFNSGTGNVGFFNSGTG 988
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 268 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 327
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 328 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 387
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 388 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 447
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 448 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 492
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 337 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 396
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 397 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 456
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 457 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 507
>gi|31791484|ref|NP_853977.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|289572892|ref|ZP_06453119.1| PE family protein [Mycobacterium tuberculosis K85]
gi|31617070|emb|CAD93177.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|289537323|gb|EFD41901.1| PE family protein [Mycobacterium tuberculosis K85]
Length = 1985
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 106/255 (41%), Gaps = 26/255 (10%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNC---NTGGL--GLRNCNTGGLG 52
+ GL N +T L N+G GL N N GG G+ N LG
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
N G LG N LG + + +G N + LG N +G N + +G
Sbjct: 637 DYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIG 691
Query: 113 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N G
Sbjct: 692 IGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGN 751
Query: 171 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G+ N + GL N NTG L + NTG + + NTGG N NTG + N
Sbjct: 752 FGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYN 811
Query: 228 TGGLGLRNCNTGGLI 242
TG N NTG I
Sbjct: 812 TGMANTGNINTGAFI 826
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 86/199 (43%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N +G N LG + + +G N + LG N +G N
Sbjct: 627 IFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIG 686
Query: 68 TGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N
Sbjct: 687 SNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGN 746
Query: 126 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 747 SGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFN 806
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 807 TGDYNTGMANTGNINTGAF 825
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 128
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 185
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1472 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1528
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1529 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1588
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1589 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1648
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1649 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1708
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1709 SFNPGDSNTGDF 1720
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1543
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1544 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1603
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1604 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1663
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1664 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1723
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1724 SYNTGLGNTGDVDTGAFI 1741
>gi|385993407|ref|YP_005911705.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339293361|gb|AEJ45472.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 444
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 181 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 240
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 241 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 300
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 301 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 360
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 361 YNTGIANTGDVSTGAFI 377
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 181 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 240
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 241 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 300
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 301 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 360
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 361 YNTGIANTGDVSTGAF 376
>gi|289445843|ref|ZP_06435587.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289418801|gb|EFD16002.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1147
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 338 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 397
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 398 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 457
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 458 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 517
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 518 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 554
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 331 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 387
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 388 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 447
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 448 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 507
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 508 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 553
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 790 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 849
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 850 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 909
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 910 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 969
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 970 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 1029
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 1030 TGAFITGSYSNG 1041
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 346 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 405
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 406 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 465
Query: 127 NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 466 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 525
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 526 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 580
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 581 PEIPY--RYDLSVPIDIPITGTVVATTPN 607
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 811 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 870
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 871 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 930
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 931 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 990
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 991 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 1049
Query: 249 G 249
G
Sbjct: 1050 G 1050
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 774 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 833
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 834 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 893
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 894 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 953
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 954 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 1013
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA S S
Sbjct: 1014 NTGDYNTGVANTGDVDTGAFITGSYS 1039
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 771 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 830
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 831 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 890
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 891 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 950
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 951 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 1003
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 199
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTGG N NTG N NTG + +TG I
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAFI 103
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 62/158 (39%), Gaps = 14/158 (8%)
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 169
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
+ NTGG N NTG N NTG + +TG N + G L R G
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAFISGNYSNGIL-WRGDYQG 119
Query: 230 GLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIK 267
+G L +P+ A N P + I
Sbjct: 120 LIGYSYA----LTIPEIP------AHLDVNIPIDIPIT 147
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 79
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 89
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 99
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 109
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 119
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 129
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 139
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 149
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 159
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 68
G N TG G+ N TG G+ N + GL N NTGG N NTG + NT
Sbjct: 10 GFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNT 69
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
GG N NTG N NTG + +TG
Sbjct: 70 GGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
>gi|121636220|ref|YP_976443.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988693|ref|YP_002643380.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378770053|ref|YP_005169786.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449062301|ref|YP_007429384.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|121491867|emb|CAL70330.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771806|dbj|BAH24612.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600236|emb|CCC62906.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356592374|gb|AET17603.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449030809|gb|AGE66236.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1975
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 106/255 (41%), Gaps = 26/255 (10%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNC---NTGGL--GLRNCNTGGLG 52
+ GL N +T L N+G GL N N GG G+ N LG
Sbjct: 567 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 626
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
N G LG N LG + + +G N + LG N +G N + +G
Sbjct: 627 DYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIG 681
Query: 113 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N G
Sbjct: 682 IGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGN 741
Query: 171 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G+ N + GL N NTG L + NTG + + NTGG N NTG + N
Sbjct: 742 FGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYN 801
Query: 228 TGGLGLRNCNTGGLI 242
TG N NTG I
Sbjct: 802 TGMANTGNINTGAFI 816
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 616 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 670
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 671 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 730
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 731 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 790
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 791 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 847
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 848 ---VSVDVNIPIHIPIT 861
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 86/199 (43%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N +G N LG + + +G N + LG N +G N
Sbjct: 617 IFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIG 676
Query: 68 TGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N
Sbjct: 677 SNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGN 736
Query: 126 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 737 SGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFN 796
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 797 TGDYNTGMANTGNINTGAF 815
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1051 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1110
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1111 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1165
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1166 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1225
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1226 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1280
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1067 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1123
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1124 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1181
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1182 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1241
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1242 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1279
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 148
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 205
+GL N +G +GL N TG G+ N TG GL N NTG + NTG N
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGNFNTGN 349
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 387
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1081 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1140
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1141 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1200
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1201 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1260
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1261 IGNYNTGIANTGDVDTGAF 1279
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 67/156 (42%), Gaps = 5/156 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTG N
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGNFNTGN 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTG N NTG + NTG N NTG
Sbjct: 350 YNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 385
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 67/156 (42%), Gaps = 5/156 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 128
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 185
+GL N +G +GL N TG G+ N TG GL N NTG + NTG N
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGNFNTGN 349
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG N NTG + NTG N NTG
Sbjct: 350 YNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 385
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 67/156 (42%), Gaps = 5/156 (3%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTG N
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGNFNTGN 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG N NTG + NTG N NTG
Sbjct: 350 YNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 385
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 68/158 (43%), Gaps = 9/158 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGNFNT 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
N NTG N NTG + NTG N NTG
Sbjct: 348 GNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 385
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 1462 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 1518
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 1519 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 1578
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 1579 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 1638
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1639 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 1698
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 1699 SFNPGDSNTGDF 1710
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 1474 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 1533
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 1534 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 1593
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 1594 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 1653
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 1654 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 1713
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 1714 SYNTGLGNTGDVDTGAFI 1731
>gi|385996226|ref|YP_005914524.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339296180|gb|AEJ48291.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 1148
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+PI G + GL N G N LGL N +G +G N G +G N
Sbjct: 541 SPIVNIGWADVGAFNTGLGNVGDLNWGAANIGAQNLGLGNLGSGNVGFGNIGAGNVGFAN 600
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 123
+GL G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 601 SGPA-VGLAGL--GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 657
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 180
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 658 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 717
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
+ NTG + + NTGG + NTG NTG
Sbjct: 718 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 756
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 102
+ N +G N G +G N +G +N LGL N +G +G N G +G
Sbjct: 543 IVNIGWADVGAFNTGLGNVGDLNWGAANIGAQN-----LGLGNLGSGNVGFGNIGAGNVG 597
Query: 103 LRNCNT-------GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGL 153
N G +GL N + GL N G +GL N TG G+GL G+G
Sbjct: 598 FANSGPAVGLAGLGNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGG 657
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 210
N +G +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 658 LNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGI 717
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG + + NTGG + NTG
Sbjct: 718 ANPGSYNTGSFNVGDTNTGGFNPGDINTGWF 748
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL N
Sbjct: 611 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 670
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG GL N + G+ N TG GL N NTG + NTG +
Sbjct: 671 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNV 730
Query: 144 RNCNTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CN 197
+ NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 731 GDTNTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGIT 789
Query: 198 TGGLGLRNCNTGGLG 212
+R TGG+G
Sbjct: 790 IPQFPIRITTTGGIG 804
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + GL N G +GL N TG G+GL G+G N +G +GL N TG
Sbjct: 614 GLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTG 673
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N TG GL N NTG + NTG + +
Sbjct: 674 NVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDT 733
Query: 127 NTGGLGLRNCNTGGL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGG 180
NTGG + NTG G+ N NTG L + ++ G+ R + G GL
Sbjct: 734 NTGGFNPGDINTGWFNTGIMNTGTRNTGAL-MSGTDSNGMLWRGDHEGLFGLSYGITIPQ 792
Query: 181 LGLRNCNTGGLG 192
+R TGG+G
Sbjct: 793 FPIRITTTGGIG 804
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 77/185 (41%), Gaps = 15/185 (8%)
Query: 25 NCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--G 80
N G LG N G G+ N G G+ N GL N G +G N TG G
Sbjct: 3 NIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGTGNIG 57
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
+GL + G+G N G +GL N TG +G N TG G+ N G+ N T
Sbjct: 58 IGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTAS 117
Query: 141 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
GL N + G+ N NTG + NTGG NTG + NT GL N
Sbjct: 118 TGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAG 174
Query: 198 TGGLG 202
T G G
Sbjct: 175 TFGTG 179
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 77/185 (41%), Gaps = 15/185 (8%)
Query: 45 NCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--G 100
N G LG N G G+ N G G+ N GL N G +G N TG G
Sbjct: 3 NIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGTGNIG 57
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 160
+GL + G+G N G +GL N TG +G N TG G+ N G+ N T
Sbjct: 58 IGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTAS 117
Query: 161 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
GL N + G+ N NTG + NTGG NTG + NT GL N
Sbjct: 118 TGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAG 174
Query: 218 TGGLG 222
T G G
Sbjct: 175 TFGTG 179
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 77/185 (41%), Gaps = 15/185 (8%)
Query: 55 NCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--G 110
N G LG N G G+ N G G+ N GL N G +G N TG G
Sbjct: 3 NIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGTGNIG 57
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N G +GL N TG +G N TG G+ N G+ N T
Sbjct: 58 IGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTAS 117
Query: 171 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
GL N + G+ N NTG + NTGG NTG + NT GL N
Sbjct: 118 TGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAG 174
Query: 228 TGGLG 232
T G G
Sbjct: 175 TFGTG 179
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 68/160 (42%), Gaps = 8/160 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +G N GL N G +G N TG G+GL + G+G N G +GL N
Sbjct: 23 VGNVGFGNAGINNYGLANMGVGNIGFANTGTGNIGIGLVGDHRTGIGGLNSGIGNIGLFN 82
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 132
TG +G N TG G+ N G+ N T GL N + G+ N NTG
Sbjct: 83 SGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGDYNTGSFN 142
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
+ NTGG NTG + NT GL N T G G
Sbjct: 143 AGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTG 179
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 68/164 (41%), Gaps = 12/164 (7%)
Query: 85 NCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--G 140
N G LG N G G+ N G G+ N GL N G +G N TG G
Sbjct: 3 NIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNY-----GLANMGVGNIGFANTGTGNIG 57
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
+GL + G+G N G +GL N TG +G N TG G+ N G+ N T
Sbjct: 58 IGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTAS 117
Query: 201 LGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 241
GL N + G+ N NTG + NTGG NTG
Sbjct: 118 TGLFNAGSFSTGIANTGDYNTGSFNAGDTNTGGFNPGGINTGWF 161
>gi|385993408|ref|YP_005911706.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339293362|gb|AEJ45473.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 1735
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 16/250 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG + NTG
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMAN 816
Query: 233 LRNCNTGGLI 242
N NTG I
Sbjct: 817 TGNINTGAFI 826
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIFNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 86/199 (43%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N +G N LG + + +G N + LG N +G N
Sbjct: 627 IFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIG 686
Query: 68 TGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N
Sbjct: 687 SNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGN 746
Query: 126 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 747 SGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFN 806
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 807 TGDYNTGMANTGNINTGAF 825
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 93/225 (41%), Gaps = 15/225 (6%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N+G L + +G GL N G GL N T G N +T L N+G L N
Sbjct: 1439 ANSGFWNLASATSGASGLLNVGALGSGLANVGTTVSGFYNTSTSDLATPAFNSG---LAN 1495
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+T GL +TG + L LGL N T +G+ N +G N + G +
Sbjct: 1496 ISTSIAGLLRDSTGTMVLN------LGLANHGTLNVGIANLGDYNIGFANLGSANFG--S 1547
Query: 136 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N GG + NTG +GL N + +G N LG N + +G N LG
Sbjct: 1548 ANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGNDNLGF 1607
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNC 236
N + +G N + +G+ G +G + N+G +GL N
Sbjct: 1608 ANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNS 1652
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 84/210 (40%), Gaps = 19/210 (9%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
L + +G GL N G GL N T G N +T L N+G L N +T G
Sbjct: 1446 LASATSGASGLLNVGALGSGLANVGTTVSGFYNTSTSDLATPAFNSG---LANISTSIAG 1502
Query: 73 LRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--------CNTG- 119
L +TG LGL N T +G+ N +G N + G N NTG
Sbjct: 1503 LLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSANFGSANIGGNNIGGANTGI 1562
Query: 120 -GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+GL N + +G N LG N + +G N LG N + +G N +
Sbjct: 1563 FDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGS 1622
Query: 179 GGLGLRNCNTGGLGLRNCNTGG--LGLRNC 206
+G+ G +G + N+G +GL N
Sbjct: 1623 NNIGIGLTGDGQIGFGSLNSGSGNIGLFNS 1652
>gi|383764105|ref|YP_005443087.1| hypothetical protein CLDAP_31500 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384373|dbj|BAM01190.1| hypothetical protein CLDAP_31500 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 273
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 99/250 (39%), Gaps = 4/250 (1%)
Query: 1 MPPIVAPISTKGLR--NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 58
+ + P G+ N GG+ N GG+ N GG+ N GG+ N
Sbjct: 21 VISVSVPAQAGGIWANGGNKGGIWANGGNKGGIWANGGNKGGIWANGGNKGGIWANGGNK 80
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
GG+ N GG+ N GG+ N GG+ N GG+ N GG+ N
Sbjct: 81 GGIWANGGNKGGIWANGGNKGGIWANGGNKGGIWANGGNKGGIWANGGNKGGIWANGGNR 140
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
GG+ N GG+ N GG+ N GG+ N GG+ N GG+ N
Sbjct: 141 GGIWANGGNKGGIWANGGNKGGIWANGGNKGGIWANGGNKGGIWANGGNKGGIWANGGNK 200
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
GG+ N GG+ N GG+ N GG+ N GG+ N GG+ N
Sbjct: 201 GGIWANGGNKGGIWANGGNKGGIWANGGNKGGIWANGGNKGGIWANGGNKGGIWANGGNK 260
Query: 239 GGLIV--PKS 246
GG+ PK
Sbjct: 261 GGIWANLPKD 270
>gi|289756369|ref|ZP_06515747.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289711933|gb|EFD75945.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 2199
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 959 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1018
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1019 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1078
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1079 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1138
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 1139 YNTGIANTGDVSTGAFI 1155
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 1390 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 1449
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 1450 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 1509
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 1510 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 1569
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 1570 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 1606
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 959 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1018
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1019 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1078
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1079 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1138
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 1139 YNTGIANTGDVSTGAF 1154
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 1383 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 1439
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 1440 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 1499
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 1500 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 1559
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 1560 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 1605
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 1398 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 1457
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 1458 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1517
Query: 127 NTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 1518 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 1577
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 1578 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 1632
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 1633 PEIPY--RYDLSVPIDIPITGTVVATTPN 1659
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 1842 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 1901
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 1902 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 1961
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 1962 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 2021
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 2022 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 2081
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 2082 TGAFITGSYSNG 2093
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 1863 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 1922
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 1923 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 1982
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 1983 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 2042
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 2043 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 2101
Query: 249 G 249
G
Sbjct: 2102 G 2102
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 79 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 138
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 139 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 193
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 194 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 253
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 254 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 308
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 1826 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 1885
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 1886 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 1945
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 1946 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2005
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2006 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 2065
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA S S
Sbjct: 2066 NTGDYNTGVANTGDVDTGAFITGSYS 2091
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 95 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 151
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 152 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 209
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 210 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 269
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 270 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 307
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 109 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 168
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 169 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 228
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 229 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 288
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 289 IGNYNTGIANTGDVDTGAF 307
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 1823 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 1882
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 1883 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 1942
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 1943 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2002
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2003 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 2055
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 490 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 546
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 547 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 606
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 607 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 666
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 667 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 726
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 727 SFNPGDSNTGDF 738
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 502 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 561
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 562 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 621
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 622 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 681
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 682 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 741
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 742 SYNTGLGNTGDVDTGAFI 759
>gi|385993406|ref|YP_005911704.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339293360|gb|AEJ45471.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 993
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 184 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 243
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 244 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 303
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 304 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 363
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 364 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 400
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 177 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 233
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 234 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 293
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 294 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 353
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 354 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 399
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 110/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 192 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 251
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 252 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 311
Query: 127 NTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 312 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 371
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 372 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 426
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 427 PEIPY--RYDLSVPIDIPITGTVVATTPN 453
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 636 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 695
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N + +GL N LG N + +G N + LG N + +G N +G
Sbjct: 696 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 755
Query: 123 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+ G +G+ + N+G +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 756 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 815
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 816 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 875
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 876 TGAFITGSYSNG 887
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 657 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 716
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 717 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 776
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 777 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 836
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 837 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 895
Query: 249 G 249
G
Sbjct: 896 G 896
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 620 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 679
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 680 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 739
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 740 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 799
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 800 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 859
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 860 NTGDYNTG 867
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 617 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 676
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 677 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 736
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 737 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 796
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 797 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 849
>gi|289568216|ref|ZP_06448443.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289541969|gb|EFD45618.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 2199
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 959 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1018
Query: 111 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1019 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1078
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1079 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1138
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 1139 YNTGIANTGDVSTGAFI 1155
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G+ N +
Sbjct: 959 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGVANTGSNN 1018
Query: 101 LGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N N G+GL G+G N +G +GL N G +G N TG G+ N T
Sbjct: 1019 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1078
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 1079 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 1138
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 1139 YNTGIANTGDVSTGAF 1154
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 1390 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 1449
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG + + N+G +GL N G +G N TG +G+ N T
Sbjct: 1450 IGFANTGSGNIGIGLTGTGQIEFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 1509
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 1510 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 1569
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 1570 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 1606
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 1842 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 1901
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 1902 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 1961
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 1962 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 2021
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 2022 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 2081
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 2082 TGAFITGSYSNG 2093
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 1863 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 1922
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 1923 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 1982
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 1983 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 2042
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 2043 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 2101
Query: 249 G 249
G
Sbjct: 2102 G 2102
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 95/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 1383 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 1439
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG + + N+G +GL N G +G N T
Sbjct: 1440 IGIANTGSANIGFANTGSGNIGIGLTGTGQIEFGSFNSGSHNIGLFNSGDGNVGFFNSGT 1499
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 1500 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 1559
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 1560 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 1605
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 79 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 138
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 139 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 193
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 194 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 253
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 254 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 308
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 109/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 1398 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 1457
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG + + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 1458 GNIGIGLTGTGQIEFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1517
Query: 127 NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 1518 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 1577
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 1578 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 1632
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 1633 PEIPY--RYDLSVPIDIPITGTVVATTPN 1659
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 1826 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 1885
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 1886 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 1945
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 1946 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2005
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 2006 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 2065
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA S S
Sbjct: 2066 NTGDYNTGVANTGDVDTGAFITGSYS 2091
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 95 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 151
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 152 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 209
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 210 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 269
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 270 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 307
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 109 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 168
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 169 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 228
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 229 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 288
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 289 IGNYNTGIANTGDVDTGAF 307
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 1823 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 1882
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 1883 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 1942
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 1943 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 2002
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 2003 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 2055
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 490 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 546
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 547 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 606
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 607 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 666
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 667 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 726
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 727 SFNPGDSNTGDF 738
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 502 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 561
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 562 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 621
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 622 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 681
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 682 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 741
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 742 SYNTGLGNTGDVDTGAFI 759
>gi|433636455|ref|YP_007270082.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
gi|432168048|emb|CCK65572.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
Length = 3669
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N LG N G +G N G LG N G+G G +G N G
Sbjct: 1943 LGFGNVGLSNLGFGNIGDGNVGFGNIGDGNLGFGNS---GVGTGLPGLGNVGFGNAGHGN 1999
Query: 91 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
G N G +G N N G+GL N G+G N TG +GL N TG +G N T
Sbjct: 2000 YGFANFGVGNVGFANMGNNNIGIGLVGDNLTGIGGLNSGTGNIGLFNSGTGNVGFFNTGT 2059
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G GL N + G+ N GL N NTG + NTG + + NTG N
Sbjct: 2060 GNFGLFNSGSYNTGIGNSGMVSTGLFNAGNFNTGMANAGHYNTGSFNVGDTNTGDFNSGN 2119
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG + NTG N NTG N N G L
Sbjct: 2120 VNTGWFNTGDTNTGMFNTGNVNTGAFNSGNLNNGAL 2155
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 13/270 (4%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I+ GL + LGL N LGL N +GL N G +G N G +G N
Sbjct: 775 IANIGLADVGNHNLGLGNVGDFNLGLGNLGGHNMGLGNVGDGNVGFGNLGHGNVGFGNSG 834
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRN 125
N +G N G GL N G +G N N G+GL N G G N
Sbjct: 835 LAAGAAGLGN---IGFGNAGGGNYGLANVGLGNIGFANTGNNNIGIGLTGNNLTGFGFLN 891
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 182
+ +GL N TG G N G GL N G+ N TG GL N NTG
Sbjct: 892 TGSANVGLFNSGTGNTGFFNTGNGNFGLFNSGNFNTGIGNSGTGSTGLFNSGGFNTGVAN 951
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG N NTGG + NTG + +TG + +TG + + G L
Sbjct: 952 AGHYNTGNFNAGNTNTGGFNPGSVNTGWFNTGHASTGFANSGSVSTGAFMTADHSNGAL- 1010
Query: 243 VPKSKRGAQENASRSENEPCLVKIKFTPNL 272
RG+ E + + P + + T ++
Sbjct: 1011 ----WRGSHEGLASAYFGPFVSEFPITAHV 1036
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 89/208 (42%), Gaps = 12/208 (5%)
Query: 47 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG 99
N G L + N GG LGL N G +G N G LG N G L G N +G
Sbjct: 3113 NVGDLNVGAANIGGHNLGLGNIGDGNVGFGNIGHGNLGFGNAALGALAGGNVGWGNAGSG 3172
Query: 100 GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
LGL N +G N T G+GL N G+G N G +GL N TG +G N
Sbjct: 3173 NLGLANLGAANIGFANTGTNNIGIGLVGDNLTGIGGLNSGAGNVGLFNSGTGNVGFFNTG 3232
Query: 158 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
TG GL N + G+ N +TG N NTG + NTG + NTG
Sbjct: 3233 TGNFGLFNSGSYNTGIGNSGIASTGFFNAGNFNTGLANTGHYNTGSFNAGSTNTGDFNPG 3292
Query: 215 NCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG N NTG I
Sbjct: 3293 NTNTGWFNTGHANTGLGNAGNVNTGAFI 3320
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 88/207 (42%), Gaps = 12/207 (5%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG 79
N G L + N GG LGL N G +G N G LG N G L G N +G
Sbjct: 3113 NVGDLNVGAANIGGHNLGLGNIGDGNVGFGNIGHGNLGFGNAALGALAGGNVGWGNAGSG 3172
Query: 80 GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
LGL N +G N T G+GL N G+G N G +GL N TG +G N
Sbjct: 3173 NLGLANLGAANIGFANTGTNNIGIGLVGDNLTGIGGLNSGAGNVGLFNSGTGNVGFFNTG 3232
Query: 138 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
TG GL N + G+ N +TG N NTG + NTG + NTG
Sbjct: 3233 TGNFGLFNSGSYNTGIGNSGIASTGFFNAGNFNTGLANTGHYNTGSFNAGSTNTGDFNPG 3292
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGL 221
N NTG + NTG N NTG
Sbjct: 3293 NTNTGWFNTGHANTGLGNAGNVNTGAF 3319
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 101/238 (42%), Gaps = 10/238 (4%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
PI T G+ + +G N LGL N LGL N G +G N G +G N
Sbjct: 2513 PIVTLGMADVGDLNVGFGNVGNLNLGLGNLGLQNLGLGNLGDGNVGFGNVGHGNVGFGNS 2572
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 124
G L N +G N +G LGL N G +G N TG G+GL N G+G
Sbjct: 2573 GLGALAGSN-----IGFANTGSGNLGLANMGLGNIGFANTGTGNIGIGLVGDNLTGIGGL 2627
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGL 181
N TG +GL N TG +G N G G+ N + G+ N T GL N NTG
Sbjct: 2628 NAGTGNIGLFNSGTGNVGFFNSGAGNFGMFNSGSYNTGIGNSGTASTGLFNAGNFNTGMA 2687
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+ + NTG N NTG + NTG + NTG N TG N + G
Sbjct: 2688 NVGHYNTGNFNTGNTNTGDFNPGDTNTGWFNTGHTNTGFANSGNVGTGAFMSANYSNG 2745
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 96/214 (44%), Gaps = 8/214 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LGL + G +G N LGL N LGL N G +G N G +G N G
Sbjct: 1358 LGLADVGHGNVGFGNVGDVNLGLGNLGGHNLGLGNIGDGNVGFGNLGFGNVGFGNS---G 1414
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 138
L G +G N +G LG N G +GL N TG G+GL N G+G N
Sbjct: 1415 LAAGMPGLGNVGSGNAGSGNLGFGNVGLGNIGLANTGTGNIGIGLTGDNQFGIGGLNSGA 1474
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG-LRNCNTGGLGLRN 195
G +GL N G +G N TG +GL N + G+ N ++GGL N NTG +
Sbjct: 1475 GNIGLFNSGAGNVGFFNTGTGNVGLFNSGSHNTGIGNSGLSSGGLFNAGNVNTGLANTGH 1534
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + NTGG + NTG + NTG
Sbjct: 1535 YNTGSFNAGSINTGGFNSGSLNTGWFNTGHANTG 1568
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 84/198 (42%), Gaps = 12/198 (6%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNT 68
N GG LGL N G +G N G LG N G L G N +G LGL N
Sbjct: 3122 ANIGGHNLGLGNIGDGNVGFGNIGHGNLGFGNAALGALAGGNVGWGNAGSGNLGLANLGA 3181
Query: 69 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+G N T G+GL N G+G N G +GL N TG +G N TG GL N
Sbjct: 3182 ANIGFANTGTNNIGIGLVGDNLTGIGGLNSGAGNVGLFNSGTGNVGFFNTGTGNFGLFNS 3241
Query: 127 NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ G+ N +TG N NTG + NTG + NTG N NTG
Sbjct: 3242 GSYNTGIGNSGIASTGFFNAGNFNTGLANTGHYNTGSFNAGSTNTGDFNPGNTNTGWFNT 3301
Query: 184 RNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 3302 GHANTGLGNAGNVNTGAF 3319
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 81/213 (38%), Gaps = 21/213 (9%)
Query: 52 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL----------------GLRN 95
G N LG N G G N +G +G N G L GL N
Sbjct: 207 GFANVGVQNLGFGNVGRGNFGYANAGSGNIGFGNSGLGMLPGVGNMGYGNAGGGNYGLAN 266
Query: 96 CNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
G +G N N G+GL N G+G N G +GL N TG +G N TG GL
Sbjct: 267 MGVGNIGFANTGNNNIGIGLTGDNLTGIGSWNSGVGNIGLFNSGTGNVGFFNSGTGNFGL 326
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG 210
N + G+ N TG G N GL N NTG + NTG NTG
Sbjct: 327 FNSGSHNTGIGNSGTGSTGFFNAGNFNSGLGNTGHYNTGSFNAGDTNTGDFNPGGINTGW 386
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
N NTG N NTG N + G +V
Sbjct: 387 FNTGNINTGWANSGNVNTGAFNSGNYSNGMFLV 419
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 80/190 (42%), Gaps = 10/190 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNTGGLGLRNC 66
GL N G +G N G LG N G L G N +G LGL N +G N
Sbjct: 3130 GLGNIGDGNVGFGNIGHGNLGFGNAALGALAGGNVGWGNAGSGNLGLANLGAANIGFANT 3189
Query: 67 NTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
T G+GL N G+G N G +GL N TG +G N TG GL N + G+
Sbjct: 3190 GTNNIGIGLVGDNLTGIGGLNSGAGNVGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIG 3249
Query: 125 N---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
N +TG N NTG + NTG + NTG N NTG + NTG
Sbjct: 3250 NSGIASTGFFNAGNFNTGLANTGHYNTGSFNAGSTNTGDFNPGNTNTGWFNTGHANTGLG 3309
Query: 182 GLRNCNTGGL 191
N NTG
Sbjct: 3310 NAGNVNTGAF 3319
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 81/205 (39%), Gaps = 17/205 (8%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---------RNCNTGGL 61
+G N LG N G G N +G +G N GLG+ N G
Sbjct: 206 RGFANVGVQNLGFGNVGRGNFGYANAGSGNIGFGNS---GLGMLPGVGNMGYGNAGGGNY 262
Query: 62 GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
GL N G +G N N G+GL N G+G N G +GL N TG +G N TG
Sbjct: 263 GLANMGVGNIGFANTGNNNIGIGLTGDNLTGIGSWNSGVGNIGLFNSGTGNVGFFNSGTG 322
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNC 176
GL N + G+ N TG G N GL N NTG + NTG
Sbjct: 323 NFGLFNSGSHNTGIGNSGTGSTGFFNAGNFNSGLGNTGHYNTGSFNAGDTNTGDFNPGGI 382
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGL 201
NTG N NTG N NTG
Sbjct: 383 NTGWFNTGNINTGWANSGNVNTGAF 407
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 93/210 (44%), Gaps = 12/210 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT--- 68
GL + G +G N LGL N LGL N G +G N G +G N
Sbjct: 1359 GLADVGHGNVGFGNVGDVNLGLGNLGGHNLGLGNIGDGNVGFGNLGFGNVGFGNSGLAAG 1418
Query: 69 ----GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N +G LG N G +GL N TG G+GL N G+G N G +G
Sbjct: 1419 MPGLGNVGSGNAGSGNLGFGNVGLGNIGLANTGTGNIGIGLTGDNQFGIGGLNSGAGNIG 1478
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG-LRNCNTGGLGLRNCNTG 179
L N G +G N TG +GL N + G+ N ++GGL N NTG + NTG
Sbjct: 1479 LFNSGAGNVGFFNTGTGNVGLFNSGSHNTGIGNSGLSSGGLFNAGNVNTGLANTGHYNTG 1538
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
+ NTGG + NTG + NTG
Sbjct: 1539 SFNAGSINTGGFNSGSLNTGWFNTGHANTG 1568
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 108/271 (39%), Gaps = 22/271 (8%)
Query: 12 GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N G+GL N G+G N TG +GL N TG +G N TG GL N +
Sbjct: 2011 GFANMGNNNIGIGLVGDNLTGIGGLNSGTGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSY 2070
Query: 70 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G+ N GL N NTG + NTG + + NTG N NTG +
Sbjct: 2071 NTGIGNSGMVSTGLFNAGNFNTGMANAGHYNTGSFNVGDTNTGDFNSGNVNTGWFNTGDT 2130
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG-GLGLRNCNTGGLGL-RNCNTGGLG 182
NTG N NTG N N G L G R+ G + + + + N G +
Sbjct: 2131 NTGMFNTGNVNTGAFNSGNLNNGALWTGDRHWLAGLAFTIEIPASTIIDINETLNLGPIN 2190
Query: 183 LRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 237
+ + G+ L + N G + + GL T L + G+ +N
Sbjct: 2191 IPQIDIPGMSLFDVHELINLGPFTIPQIDVPAFGLDIHETMVLDPIVFLPATGMPAQN-- 2248
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
+++P S ++++++ L+ ++F
Sbjct: 2249 ---IVIPLSSPAGTQSSTQTF---PLISMRF 2273
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 102/244 (41%), Gaps = 14/244 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+ L +T G L LG+ + G L G N LGL N LGL N
Sbjct: 2497 QQLSGLSTAGTALNQTPIVTLGM--ADVGDLNVGFGNVGNLNLGLGNLGLQNLGLGNLGD 2554
Query: 69 GGLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GL 121
G +G N G +G N G L G N +G LGL N G +G N TG G+
Sbjct: 2555 GNVGFGNVGHGNVGFGNSGLGALAGSNIGFANTGSGNLGLANMGLGNIGFANTGTGNIGI 2614
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
GL N G+G N TG +GL N TG +G N G G+ N + G+ N T
Sbjct: 2615 GLVGDNLTGIGGLNAGTGNIGLFNSGTGNVGFFNSGAGNFGMFNSGSYNTGIGNSGTAST 2674
Query: 182 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
GL N NTG + + NTG N NTG + NTG + NTG N T
Sbjct: 2675 GLFNAGNFNTGMANVGHYNTGNFNTGNTNTGDFNPGDTNTGWFNTGHTNTGFANSGNVGT 2734
Query: 239 GGLI 242
G +
Sbjct: 2735 GAFM 2738
>gi|433633322|ref|YP_007266949.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
gi|432164915|emb|CCK62379.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
Length = 3181
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL N + G N +G+ N +G N LG N + +G N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGFANTGSNN 2000
Query: 111 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
+G N + +G+ TG G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGRIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 169 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 226 CNTGGLGLRNCNTGGLI 242
NTG + +TG I
Sbjct: 2121 YNTGIANTGDVSTGAFI 2137
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 106/255 (41%), Gaps = 26/255 (10%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNC---NTGGL--GLRNCNTGGLG 52
+ GL N +T L N+G GL N N GG G+ N LG
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIVNVGLANLG 636
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
N G LG N LG + + +G N + LG N +G N + +G
Sbjct: 637 DYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIG 691
Query: 113 LRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N G
Sbjct: 692 IGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGN 751
Query: 171 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G+ N + GL N NTG L + NTG + + NTGG N NTG + N
Sbjct: 752 FGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYN 811
Query: 228 TGGLGLRNCNTGGLI 242
TG N NTG I
Sbjct: 812 TGMANTGNINTGAFI 826
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 105/240 (43%), Gaps = 7/240 (2%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 74
N G + + NTG L N G L N GG +G+ N +G+ N + +GL
Sbjct: 2836 NLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGVGNLGSYNIGLA 2895
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 132
N LG N + +GL N + LG N + +G N N G+GL G+G
Sbjct: 2896 NLGDDNLGFGNAGSYNIGLANLGSANLGFANTGSNNIGFANTGNNNIGIGLTGNGQIGIG 2955
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 189
N + +GL N +G +G N TG +G+ N TG GL N NTG + NTG
Sbjct: 2956 SLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTG 3015
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRG 249
N NTGG + NTGG + NTG L + NTG + +TG I G
Sbjct: 3016 VFNPGNVNTGGFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAFITGSYSNG 3075
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G+ N LG N G LG N LG + + +G N + LG N +
Sbjct: 626 GIVNVGLANLGDYNIGFGNLGGDN-----LGFAHAGSYNIGFANTGSNNLGFANTGDNNI 680
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G N + +G+ +G +G + N+G +GL N G +GL N +G G+ N TG
Sbjct: 681 GFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTG 740
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G+ N G G+ N + GL N NTG L + NTG + + NTGG N
Sbjct: 741 NWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNY 800
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------GLIVPKSKRGA 250
NTG + NTG N NTG + ++ GL R N G G+ +P+
Sbjct: 801 NTGYFNTGDYNTGMANTGNINTGAF-ISGNHSNGLLWRGDNQGLIDLAIGVDIPEIPI-- 857
Query: 251 QENASRSENEPCLVKIK 267
S N P + I
Sbjct: 858 ---VSVDVNIPIHIPIT 871
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 2372 VGLANLGGSNFGIGNTGIVNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 2431
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 2432 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 2491
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N + GL N +G+ N NTG + NTG L +
Sbjct: 2492 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNIGVGNTGSINTGSFNTGSTNTGSFNLGD 2551
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 2552 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 2588
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 106/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +G+ N + +GL N LG
Sbjct: 2845 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGVGNLGSYNIGLANLGDDNLGF 2904
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +GL N + LG N + +G N N G+GL G+G N + +
Sbjct: 2905 GNAGSYNIGLANLGSANLGFANTGSNNIGFANTGNNNIGIGLTGNGQIGIGSLNSGSNNI 2964
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG N NT
Sbjct: 2965 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGNVNT 3024
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
GG + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 3025 GGFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 3083
Query: 249 G 249
G
Sbjct: 3084 G 3084
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 84/196 (42%), Gaps = 5/196 (2%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL N + G N +G+ N +G N LG N + +G N +
Sbjct: 1941 LGLANLGSNNAGFGNTGIFDVGVANLGNYNIGFGNFGDDNLGFANLGSYNIGFANTGSNN 2000
Query: 101 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
+G N + +G+ TG G+G N +G +GL N G +G N TG G+ N T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGRIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 159 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
G G+ N + GL N NTGG N NTG + NTGG N NTG N
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGN 2120
Query: 216 CNTGGLGLRNCNTGGL 231
NTG + +TG
Sbjct: 2121 YNTGIANTGDVSTGAF 2136
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 96/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 2365 AGLGNLN---VGLANLGGSNFGIGNTGIVNVGFANVGNHNIGLANLGNYSVGFANSGNYH 2421
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 2422 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 2481
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRN 185
G +G+ N T G+ N + GL N + GL N +G+ N NTG +
Sbjct: 2482 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNIGVGNTGSINTGSFNTGS 2541
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 2542 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 2587
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A I GL N +G N LG + + +G N + LG N +G N
Sbjct: 625 AGIVNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFAN 684
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+
Sbjct: 685 IGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGI 744
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 745 GNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N NTG
Sbjct: 805 FNTGDYNTGMANTGNINTGAF 825
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
LG N + LGL N +G+ N + +G N + +G+ G +G + N+G
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGVANTGSNNVGFGNTGSNNIGIGLTGNGQIGFGSFNSGS 289
Query: 141 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 106/257 (41%), Gaps = 13/257 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
+G N +GL N +G N +G+ N + +G N +G +G+ TG
Sbjct: 2392 VGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQ 2451
Query: 81 LGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+G + N+G +GL N G +G N TG +G+ N T G+ N + GL N +
Sbjct: 2452 IGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGS 2511
Query: 139 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
GL N +G+ N NTG + NTG L + NTG + NTG +
Sbjct: 2512 TNTGLFNPGNVNIGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGD 2571
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENAS 255
NTG N NTG + + G R G +GL + +P+ + + S
Sbjct: 2572 YNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITIPEIPY--RYDLS 2624
Query: 256 RSENEPCL-VKIKFTPN 271
+ P + TPN
Sbjct: 2625 VPIDIPITGTVVATTPN 2641
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 106/248 (42%), Gaps = 19/248 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 2808 AGLFLDNTGNLTLNFGVANLGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 2867
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +G+ N + +GL N LG N + +GL N + LG N
Sbjct: 2868 GGNNIGIANTGIFDIGVGNLGSYNIGLANLGDDNLGFGNAGSYNIGLANLGSANLGFANT 2927
Query: 127 NTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N N G+GL G+G N + +GL N +G +G N TG +G+
Sbjct: 2928 GSNNIGFANTGNNNIGIGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 2987
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG N NTGG + NTGG + NTG L
Sbjct: 2988 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGNVNTGGFNPGSFNTGGFNPGSGNTGYL 3047
Query: 232 GLRNCNTG 239
+ NTG
Sbjct: 3048 NTGDYNTG 3055
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 75/166 (45%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LG N + LGL N +G+ N + +G N + +G+ G +G + N+G
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGVANTGSNNVGFGNTGSNNIGIGLTGNGQIGFGSFNSGS 289
Query: 111 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGLANL--GGHNIGVANTGSNNVGFGNTGSNNIGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 96/235 (40%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 1061 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 1120
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 1121 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLMGNGQIG 1175
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N + +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 1176 FGSFNSGSNNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 1235
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 1236 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 1290
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 92/226 (40%), Gaps = 20/226 (8%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
GG G + GLG N LG N G G+ N +G N +GL N
Sbjct: 2355 GGAGTTILDLAGLGNLNVGLANLGGSNFGIGNTGIVN-----VGFANVGNHNIGLANLGN 2409
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNC 146
+G N +G+ N + +G N +G +G+ TG +G + N+G +GL N
Sbjct: 2410 YSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNS 2469
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN----------- 195
G +G N TG +G+ N T G+ N + GL N + GL N
Sbjct: 2470 GDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNIGVGNT 2529
Query: 196 --CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG + NTG L + NTG + NTG + NTG
Sbjct: 2530 GSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTG 2575
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 89/218 (40%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 1077 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 1133
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N + +GL N
Sbjct: 1134 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLMGNGQIGFGSFNSGSNNIGLFNS 1191
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 1192 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 1251
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 1252 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 82/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 1091 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 1150
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N + +GL N + +G N +G G+ N
Sbjct: 1151 SNNVGFGNTGSNNVGIGLMGNGQIGFGSFNSGSNNIGLFNSGSNNIGFFNSGSGNFGIAN 1210
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 1211 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 1270
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 1271 IGNYNTGIANTGDVDTGAF 1289
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 88/208 (42%), Gaps = 10/208 (4%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
GG G + GLG N LG N G G+ N +G N +GL N
Sbjct: 2355 GGAGTTILDLAGLGNLNVGLANLGGSNFGIGNTGIVN-----VGFANVGNHNIGLANLGN 2409
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNC 156
+G N +G+ N + +G N +G +G+ TG +G + N+G +GL N
Sbjct: 2410 YSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNS 2469
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN- 215
G +G N TG +G+ N T G+ N + GL N + GL N +G+ N
Sbjct: 2470 GDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNIGVGNT 2529
Query: 216 --CNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG + NTG L + NTG
Sbjct: 2530 GSINTGSFNTGSTNTGSFNLGDHNTGSF 2557
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 93/227 (40%), Gaps = 5/227 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LGL N T +G+ N +G N + G N +G+ N +GL N +
Sbjct: 1515 LGLANHGTLNVGIANLGDYNIGFANLGSANFGSANIGGNNIGVANTGIFDIGLANLGSYN 1574
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
+G N LG N + +G N LG N + +G N + +G+ G
Sbjct: 1575 IGFGNAGDDNLGFGNLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQ 1634
Query: 141 LGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRN 195
+G + N+G +GL N G +G N G +G+ N T GL N NTG +
Sbjct: 1635 IGFGSLNSGSGNIGLFNSGNGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGD 1694
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG + NTG + +TG I
Sbjct: 1695 VNTGIGNTGSFNTGSFNPGDSNTGDFNPGSYNTGLGNTGDVDTGAFI 1741
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 99/248 (39%), Gaps = 21/248 (8%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
+ P GL N +T GL +TG + L LGL N T +G+ N +G
Sbjct: 1484 LATPAFNSGLANISTSIAGLLRDSTGTMVLN------LGLANHGTLNVGIANLGDYNIGF 1537
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
N + G N +G+ N +GL N LG N G G N G LG
Sbjct: 1538 ANLGSANFGSANIGGNNIGVANTGIFDIGLAN-----LGSYNIGFGNAGDDNLGFGNLGS 1592
Query: 124 RNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 176
N G LG N NTG + NTG G+GL G G N +G +GL N
Sbjct: 1593 YNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNS 1652
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 1653 GNGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNP 1712
Query: 234 RNCNTGGL 241
+ NTG
Sbjct: 1713 GDSNTGDF 1720
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 94/231 (40%), Gaps = 10/231 (4%)
Query: 10 TKGLRNCNTGGLGLRNC-NTGGLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNC 66
T GL N + G+ N G LG N G G+ N + LG +G +
Sbjct: 2293 TSGLWNLASAASGVSGLLNVGALGSGVANVGNTISGIYNTSPLDLGTPAFGSGLANIAGL 2352
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG G + GLG N LG N G G+ N +G N +GL N
Sbjct: 2353 LQGGAGTTILDLAGLGNLNVGLANLGGSNFGIGNTGIVN-----VGFANVGNHNIGLANL 2407
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLR 184
+G N +G+ N + +G N +G +G+ TG +G + N+G +GL
Sbjct: 2408 GNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLF 2467
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
N G +G N TG +G+ N T G+ N + GL N + GL N
Sbjct: 2468 NSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFN 2518
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 85/216 (39%), Gaps = 11/216 (5%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N+G L + +G GL N G GL N T G N +T L N+G L N
Sbjct: 1439 ANSGFWNLASATSGVSGLLNVGALGSGLANVGTTVSGFYNTSTSDLATPAFNSG---LAN 1495
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+T GL +TG + L LGL N T +G+ N +G N + G N
Sbjct: 1496 ISTSIAGLLRDSTGTMVLN------LGLANHGTLNVGIANLGDYNIGFANLGSANFGSAN 1549
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
+G+ N +GL N + +G N LG N + +G N LG N
Sbjct: 1550 IGGNNIGVANTGIFDIGLANLGSYNIGFGNAGDDNLGFGNLGSYNVGFGNLGNDNLGFAN 1609
Query: 206 CNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 239
+ +G N N G+GL G G N +G
Sbjct: 1610 TGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSG 1645
>gi|427710065|ref|YP_007052442.1| pentapeptide repeat-containing protein [Nostoc sp. PCC 7107]
gi|427362570|gb|AFY45292.1| pentapeptide repeat protein [Nostoc sp. PCC 7107]
Length = 575
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 82/229 (35%), Gaps = 13/229 (5%)
Query: 3 PIVA--PISTKGLRN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 54
P+ A P K L + C+ G N L + N G L N + G LR
Sbjct: 32 PVYASKPEHLKQLIDTNKCPKCDLSGADFSWKNFLRTDLSDSNLSGANLSNADLSGANLR 91
Query: 55 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 114
N N L N L + N L + N G LRN N L N + G
Sbjct: 92 NINLSKAKLSRANAFRADLVSANLSDADLSSTNLSGADLRNANLTRADLTNADLSG---- 147
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G L + N G+ N N G+ L + LRN N G+ L N + L
Sbjct: 148 -ANLNGANLTDANMRGVRFDNVNLQGVNLNGVDLSNADLRNFNFRGVSLNGVNLSRVNLN 206
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
N G+ L+N N L+N + L N + L N N G L
Sbjct: 207 GYNLRGVELKNANLSYANLQNADLSNARLNNADLQNANLYNANLQGADL 255
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 74/205 (36%), Gaps = 5/205 (2%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 95
C+ G N L + N G L N + G LRN N L N L +
Sbjct: 53 CDLSGADFSWKNFLRTDLSDSNLSGANLSNADLSGANLRNINLSKAKLSRANAFRADLVS 112
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
N L + N G LRN N L N + G N G L + N G+ N
Sbjct: 113 ANLSDADLSSTNLSGADLRNANLTRADLTNADLSG-----ANLNGANLTDANMRGVRFDN 167
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
N G+ L + LRN N G+ L N + L N G+ L+N N L+N
Sbjct: 168 VNLQGVNLNGVDLSNADLRNFNFRGVSLNGVNLSRVNLNGYNLRGVELKNANLSYANLQN 227
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTGG 240
+ L N + L N N G
Sbjct: 228 ADLSNARLNNADLQNANLYNANLQG 252
>gi|118616565|ref|YP_904897.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118568675|gb|ABL03426.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length = 490
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 103/236 (43%), Gaps = 15/236 (6%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
+ +T GL N +G +G N G LG +G LG N +G LG N LG
Sbjct: 206 ADASTVNFGLANIGSGNVGNANNGIGNLG-----SGNLGNFNLGSGNLGSSNAGWANLGS 260
Query: 74 RN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 126
N N+GG L N GGL N G R NTG G+GL N G+G N
Sbjct: 261 NNIGGANSGGNNLGWGNLGGLNTGFANAGSGNFRFANTGNNNIGIGLTGDNQVGIGGLNS 320
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 183
G GL N TG +GL N TG G+ N G GL N NTG L + NTG L +
Sbjct: 321 GVGNFGLFNSGTGNVGLFNSGTGNFGIGNSGAYGTGLFNSGQANTGLLNAGSFNTGLLDV 380
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG L + N G NTG L NTG + NTG + + N G
Sbjct: 381 GNANTGSLNTGSFNMGSFNPGPSNTGALNTGTANTGWFNTGSLNTGPFNIGDMNNG 436
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 96/218 (44%), Gaps = 20/218 (9%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNT 68
G+ N +G LG N +G LG N LG N N+GG L N GGL N
Sbjct: 229 GIGNLGSGNLGNFNLGSGNLGSSNAGWANLGSNNIGGANSGGNNLGWGNLGGLNTGFANA 288
Query: 69 GGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G R NTG G+GL N G+G N G GL N TG +GL N TG G+
Sbjct: 289 GSGNFRFANTGNNNIGIGLTGDNQVGIGGLNSGVGNFGLFNSGTGNVGLFNSGTGNFGIG 348
Query: 125 NCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G GL N NTG L + NTG L + N NTG L NTG + + N G
Sbjct: 349 NSGAYGTGLFNSGQANTGLLNAGSFNTGLLDVGNANTGSL-----NTGSFNMGSFNPG-- 401
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
NTG L NTG + NTG + + N G
Sbjct: 402 ---PSNTGALNTGTANTGWFNTGSLNTGPFNIGDMNNG 436
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 92/208 (44%), Gaps = 15/208 (7%)
Query: 44 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 103
+ +T GL N +G +G N G LG +G LG N +G LG N LG
Sbjct: 206 ADASTVNFGLANIGSGNVGNANNGIGNLG-----SGNLGNFNLGSGNLGSSNAGWANLGS 260
Query: 104 RN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 156
N N+GG L N GGL N G R NTG G+GL N G+G N
Sbjct: 261 NNIGGANSGGNNLGWGNLGGLNTGFANAGSGNFRFANTGNNNIGIGLTGDNQVGIGGLNS 320
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 213
G GL N TG +GL N TG G+ N G GL N NTG L + NTG L +
Sbjct: 321 GVGNFGLFNSGTGNVGLFNSGTGNFGIGNSGAYGTGLFNSGQANTGLLNAGSFNTGLLDV 380
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG L + N G NTG L
Sbjct: 381 GNANTGSLNTGSFNMGSFNPGPSNTGAL 408
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
+ +T GL N +G +G N G LG +G LG N +G LG N LG
Sbjct: 206 ADASTVNFGLANIGSGNVGNANNGIGNLG-----SGNLGNFNLGSGNLGSSNAGWANLGS 260
Query: 134 RN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNC 186
N N+GG L N GGL N G R NTG G+GL N G+G N
Sbjct: 261 NNIGGANSGGNNLGWGNLGGLNTGFANAGSGNFRFANTGNNNIGIGLTGDNQVGIGGLNS 320
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLIV 243
G GL N TG +GL N TG G+ N G GL N NTG L + NTG L V
Sbjct: 321 GVGNFGLFNSGTGNVGLFNSGTGNFGIGNSGAYGTGLFNSGQANTGLLNAGSFNTGLLDV 380
>gi|156394481|ref|XP_001636854.1| predicted protein [Nematostella vectensis]
gi|156223961|gb|EDO44791.1| predicted protein [Nematostella vectensis]
Length = 167
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 94/163 (57%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LGL + +T LGL + +T LGL +T LGL + +T LGL +T LGL + +T
Sbjct: 3 LGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 62
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
LGL + +T LGL + +T LGL + +T LGL + +T LGL +T LGL + +T
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 122
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
LGL + +T LGL + +T LGL + +T LGL + LGL
Sbjct: 123 LGLCSYSTMTLGLCSYSTMSLGLSSYSTMTLGLCTYSIMTLGL 165
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 94/163 (57%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LGL + +T LGL + +T LGL +T LGL + +T LGL +T LGL + +T
Sbjct: 3 LGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 62
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
LGL + +T LGL + +T LGL + +T LGL + +T LGL +T LGL + +T
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 122
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
LGL + +T LGL + +T LGL + +T LGL + LGL
Sbjct: 123 LGLCSYSTMTLGLCSYSTMSLGLSSYSTMTLGLCTYSIMTLGL 165
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 94/163 (57%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
LGL + +T LGL + +T LGL +T LGL + +T LGL +T LGL + +T
Sbjct: 3 LGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 62
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 160
LGL + +T LGL + +T LGL + +T LGL + +T LGL +T LGL + +T
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 122
Query: 161 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
LGL + +T LGL + +T LGL + +T LGL + LGL
Sbjct: 123 LGLCSYSTMTLGLCSYSTMSLGLSSYSTMTLGLCTYSIMTLGL 165
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 94/163 (57%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LGL + +T LGL + +T LGL +T LGL + +T LGL +T LGL + +T
Sbjct: 3 LGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 62
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
LGL + +T LGL + +T LGL + +T LGL + +T LGL +T LGL + +T
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 122
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
LGL + +T LGL + +T LGL + +T LGL + LGL
Sbjct: 123 LGLCSYSTMTLGLCSYSTMSLGLSSYSTMTLGLCTYSIMTLGL 165
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 94/163 (57%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
LGL + +T LGL + +T LGL +T LGL + +T LGL +T LGL + +T
Sbjct: 3 LGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 62
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
LGL + +T LGL + +T LGL + +T LGL + +T LGL +T LGL + +T
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 122
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
LGL + +T LGL + +T LGL + +T LGL + LGL
Sbjct: 123 LGLCSYSTMTLGLCSYSTMSLGLSSYSTMTLGLCTYSIMTLGL 165
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 94/163 (57%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
LGL + +T LGL + +T LGL +T LGL + +T LGL +T LGL + +T
Sbjct: 3 LGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 62
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
LGL + +T LGL + +T LGL + +T LGL + +T LGL +T LGL + +T
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 122
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
LGL + +T LGL + +T LGL + +T LGL + LGL
Sbjct: 123 LGLCSYSTMTLGLCSYSTMSLGLSSYSTMTLGLCTYSIMTLGL 165
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 94/164 (57%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
T GL + +T LGL + +T LGL +T LGL + +T LGL +T LGL + +T
Sbjct: 2 TLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTM 61
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
LGL + +T LGL + +T LGL + +T LGL + +T LGL +T LGL + +T
Sbjct: 62 TLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTM 121
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
LGL + +T LGL + +T LGL + +T LGL + LGL
Sbjct: 122 TLGLCSYSTMTLGLCSYSTMSLGLSSYSTMTLGLCTYSIMTLGL 165
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 88/151 (58%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
LGL + +T LGL + +T LGL +T LGL + +T LGL +T LGL + +T
Sbjct: 3 LGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 62
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
LGL + +T LGL + +T LGL + +T LGL + +T LGL +T LGL + +T
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 122
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
LGL + +T LGL + +T LGL + +T L
Sbjct: 123 LGLCSYSTMTLGLCSYSTMSLGLSSYSTMTL 153
>gi|270015197|gb|EFA11645.1| hypothetical protein TcasGA2_TC004038 [Tribolium castaneum]
Length = 742
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/237 (18%), Positives = 78/237 (32%), Gaps = 6/237 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
+ NC + NC + L + N N+ + N + L + N + N
Sbjct: 354 NVDNC-KSNFNVDNCKSNNLSVDNYKSDNHNSNDFNIANYKSNKLNVNNYKSDKHNTNNE 412
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ + N L N + L L N + L +N + + NCN L + NC
Sbjct: 413 KSNNFNVENSKFNKLHSDNLKSNNLILANYKSDNLNKKNYKSDNFNVYNCNFNNLHIANC 472
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
+ + + N + N + + N L + N + N T + N
Sbjct: 473 KSNKVNVDNYKSDNHNTNNDKSNSFNIDNSKPNNLEVGNYKSSSFHGDNHKTNIFKVDNY 532
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ + + N + L L N + +CN+ L + N + LI
Sbjct: 533 KFNNFHVHKYKSDNHNVNNHKSNDLKLTNFKFNIFNVNDCNSNDLYVDNFKSNDLIF 589
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/279 (18%), Positives = 94/279 (33%), Gaps = 17/279 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNC 66
S L NC + L L N + + NC + L N + + +++ + R
Sbjct: 58 SKYNLYNCKSNDLNLANYKSIIFNINNCESNDLHDHNYKSNKVNVKDYKSSNFRGDDRKA 117
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
N L + N + L N + + N + + N L + N + + NC
Sbjct: 118 N--DLHVDNYKSNDHILVNYKSNDYIVNNYKSDKYNVNNHKFSDLSIANYKSNTFHVDNC 175
Query: 127 NTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLR-------NCNTGGLGLR 174
L + N + L + N N+ + N + + N N L
Sbjct: 176 KYNDLHVANYKSNNLNVDNYKSDNHNSNDYNVDNHKSDNDYFKSDIYKSNNFNFNILNKD 235
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
+ NC + + NC + L L N + L N + + N N L +
Sbjct: 236 YYKSNNFNFDNCKSDNPKVDNCKSNNLILTNYKSDNLNTNNYKSNNFNVYNRNFNNLHID 295
Query: 235 NCNTGGLIVPKSKRGAQE-NASRSENEPCLVKIKFTPNL 272
N + L + K + + +SEN+ + I + N
Sbjct: 296 NYKSNNLNLDKYYSNDYKVDNHKSENDYFKIDIYKSDNF 334
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/231 (17%), Positives = 75/231 (32%), Gaps = 6/231 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGL 73
+ + NC + NC + L + N N+ + N + L + N +
Sbjct: 351 SNINVDNC-KSNFNVDNCKSNNLSVDNYKSDNHNSNDFNIANYKSNKLNVNNYKSDKHNT 409
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
N + + N L N + L L N + L +N + + NCN L +
Sbjct: 410 NNEKSNNFNVENSKFNKLHSDNLKSNNLILANYKSDNLNKKNYKSDNFNVYNCNFNNLHI 469
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NC + + + N + N + + N L + N + N T +
Sbjct: 470 ANCKSNKVNVDNYKSDNHNTNNDKSNSFNIDNSKPNNLEVGNYKSSSFHGDNHKTNIFKV 529
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
N + + + N + L L N + +CN+ L V
Sbjct: 530 DNYKFNNFHVHKYKSDNHNVNNHKSNDLKLTNFKFNIFNVNDCNSNDLYVD 580
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 78/241 (32%), Gaps = 7/241 (2%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 87
+ + NC + L N + + NC + NC + L + N + N N
Sbjct: 331 SDNFTVDNCKSDNLNTINY-KSNINVDNC-KSNFNVDNCKSNNLSVDNYKSD-----NHN 383
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
+ + N + L + N + N + + N L N + L L N
Sbjct: 384 SNDFNIANYKSNKLNVNNYKSDKHNTNNEKSNNFNVENSKFNKLHSDNLKSNNLILANYK 443
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
+ L +N + + NCN L + NC + + + N + N + + N
Sbjct: 444 SDNLNKKNYKSDNFNVYNCNFNNLHIANCKSNKVNVDNYKSDNHNTNNDKSNSFNIDNSK 503
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIK 267
L + N + N T + N V K K + N+ L K
Sbjct: 504 PNNLEVGNYKSSSFHGDNHKTNIFKVDNYKFNNFHVHKYKSDNHNVNNHKSNDLKLTNFK 563
Query: 268 F 268
F
Sbjct: 564 F 564
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 78/247 (31%), Gaps = 12/247 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
+ N + L + N + N + + N L N + L L N + L
Sbjct: 388 NIANYKSNKLNVNNYKSDKHNTNNEKSNNFNVENSKFNKLHSDNLKSNNLILANYKSDNL 447
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
+N + + NCN L + NC + + + N + N + + N L
Sbjct: 448 NKKNYKSDNFNVYNCNFNNLHIANCKSNKVNVDNYKSDNHNTNNDKSNSFNIDNSKPNNL 507
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ N + N T + N + + + N + L L N
Sbjct: 508 EVGNYKSSSFHGDNHKTNIFKVDNYKFNNFHVHKYKSDNHNVNNHKSNDLKLTNFKFNIF 567
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLIV--- 243
+ +CN+ L + N + L N + L L N + NC + V
Sbjct: 568 NVNDCNSNDLYVDNFKSNDLIFVNFKSDNHIFHDLSLANYKSNSFNDDNCKSNNFHVDNY 627
Query: 244 ----PKS 246
PKS
Sbjct: 628 KSDNPKS 634
>gi|433632452|ref|YP_007266080.1| Conserved protein of unknown function, PPE family protein PPE54
(fragment) [Mycobacterium canettii CIPT 140070010]
gi|432164045|emb|CCK61478.1| Conserved protein of unknown function, PPE family protein PPE54
(fragment) [Mycobacterium canettii CIPT 140070010]
Length = 1268
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 89/213 (41%), Gaps = 11/213 (5%)
Query: 37 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 94
N G L N GG LG N +G G N G N GLGL G +GL
Sbjct: 213 NVGEFNLGAANVGGQNLGAANAGSGNFGFGNAGNANFGFGNS---GLGLL-PGVGNIGLG 268
Query: 95 NCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
N + G N +G G N N G+GL N G+G N TG +GL N TG +G
Sbjct: 269 NAGSANYGFANMGSGNFGFANTGNNNIGIGLTGNNLTGIGGLNSGTGNIGLFNSGTGNVG 328
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 209
N TG GL N + G+ N T G N NTG + NTG N NTG
Sbjct: 329 FFNSGTGNFGLFNSGSYNTGIGNSGTASTGWFNGGGFNTGVANPGSYNTGSFNAGNTNTG 388
Query: 210 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTG L N NTG N NTG I
Sbjct: 389 DFNPGSINTGWLNTGNINTGIANSGNVNTGVFI 421
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 93/224 (41%), Gaps = 11/224 (4%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 84
N G L N GG LG N +G G N G N GLGL G +GL
Sbjct: 213 NVGEFNLGAANVGGQNLGAANAGSGNFGFGNAGNANFGFGNS---GLGLL-PGVGNIGLG 268
Query: 85 NCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
N + G N +G G N N G+GL N G+G N TG +GL N TG +G
Sbjct: 269 NAGSANYGFANMGSGNFGFANTGNNNIGIGLTGNNLTGIGGLNSGTGNIGLFNSGTGNVG 328
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 199
N TG GL N + G+ N T G N NTG + NTG N NTG
Sbjct: 329 FFNSGTGNFGLFNSGSYNTGIGNSGTASTGWFNGGGFNTGVANPGSYNTGSFNAGNTNTG 388
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG L N NTG N NTG N + G L V
Sbjct: 389 DFNPGSINTGWLNTGNINTGIANSGNVNTGVFISGNYSNGALWV 432
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 86/194 (44%), Gaps = 10/194 (5%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+G N G +GL N G +GL N TG G+GL N G+G N G LGL N T
Sbjct: 842 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGT 901
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N + G+ N T GL N NTG + NTG L + +
Sbjct: 902 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPGSYNTGSLNVGD 961
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENAS 255
NTG + N NTG + NTG N NTG N N G L RG+ E
Sbjct: 962 TNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFMSGNYNNGLL-----WRGSYEGLF 1016
Query: 256 RSENEPCLVKIKFT 269
+ P + + T
Sbjct: 1017 GAYFGPTISQFPIT 1030
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 76/164 (46%), Gaps = 5/164 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G N G +GL N G +GL N TG G+GL N G+G N G LGL N T
Sbjct: 842 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGT 901
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 185
G +G N TG G+ N + G+ N T GL N NTG + NTG L + +
Sbjct: 902 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPGSYNTGSLNVGD 961
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
NTG + N NTG + NTG N NTG N N G
Sbjct: 962 TNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFMSGNYNNG 1005
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 87/215 (40%), Gaps = 13/215 (6%)
Query: 16 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCN------TGGLGLRNCNTGGLGLRNCN 67
N GG LG N +G G N G N G +GL N + G N
Sbjct: 222 ANVGGQNLGAANAGSGNFGFGNAGNANFGFGNSGLGLLPGVGNIGLGNAGSANYGFANMG 281
Query: 68 TGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+G G N N G+GL N G+G N TG +GL N TG +G N TG GL N
Sbjct: 282 SGNFGFANTGNNNIGIGLTGNNLTGIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGLFN 341
Query: 126 CNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
+ G+ N T G N NTG + NTG N NTG + NTG L
Sbjct: 342 SGSYNTGIGNSGTASTGWFNGGGFNTGVANPGSYNTGSFNAGNTNTGDFNPGSINTGWLN 401
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
N NTG N NTG N + G L + +
Sbjct: 402 TGNINTGIANSGNVNTGVFISGNYSNGALWVGDYQ 436
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
Query: 12 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +GL N TG G+GL N G+G N G LGL N TG +G N TG
Sbjct: 853 GLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFNSGTG 912
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G+ N + G+ N T GL N NTG + NTG L + + NTG + N
Sbjct: 913 NFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPGSYNTGSLNVGDTNTGDVNPGNI 972
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
NTG + NTG N NTG N N G
Sbjct: 973 NTGWFNTGHSNTGIANSGNVNTGAFMSGNYNNG 1005
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 73/171 (42%), Gaps = 5/171 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N +G G N N G+GL N G+G N TG +GL N TG
Sbjct: 266 GLGNAGSANYGFANMGSGNFGFANTGNNNIGIGLTGNNLTGIGGLNSGTGNIGLFNSGTG 325
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNC 126
+G N TG GL N + G+ N T G N NTG + NTG N
Sbjct: 326 NVGFFNSGTGNFGLFNSGSYNTGIGNSGTASTGWFNGGGFNTGVANPGSYNTGSFNAGNT 385
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
NTG + NTG L N NTG N NTG N + G L + +
Sbjct: 386 NTGDFNPGSINTGWLNTGNINTGIANSGNVNTGVFISGNYSNGALWVGDYQ 436
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 100/266 (37%), Gaps = 37/266 (13%)
Query: 8 ISTKGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNTGGL 61
+ + G N GG+ G N G G N + + G N + G+ N +G
Sbjct: 674 VPSSGFFNSGAGGVSGFGNFGAGSSGWWNQASSAVLGSGSGFLNAGSLSSGVLNLGSGMS 733
Query: 62 GLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
G+ N +T G+G+ +G G L + G L+ LGL N +G N
Sbjct: 734 GIYNTSTLGVGVSAVVSGLGNLGHQLSGLSVAGTTLQQSLILDLGLANVGNFNVGFGNVG 793
Query: 118 TGGLGLRNC--------------------NTGGLGLRNCNTGGL-----GLRNCNTGGLG 152
G N G +G N GL G N G +G
Sbjct: 794 DVNWGAANLGDLNVGLGNIGGGNVGFGNVGDGNIGFGNSGLAGLLGHNVGWGNAGAGNVG 853
Query: 153 LRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
L N G +GL N TG G+GL N G+G N G LGL N TG +G N TG
Sbjct: 854 LANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFNSGTGN 913
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNC 236
G+ N + G+ N T GL N
Sbjct: 914 FGIGNSGSYNTGIGNSGTASTGLFNA 939
>gi|124808756|ref|XP_001348400.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
gi|23497293|gb|AAN36839.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
Length = 1621
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
+ L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1218 EKLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSG 1277
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 113
L N N G L N N G L N N G L N C+T + +
Sbjct: 1278 EKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 123
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 32 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 91
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 92 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 133
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 42 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 102 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 143
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 52 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 112 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 153
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 163
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 173
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 183
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 92 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 152 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 193
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 102 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 162 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 203
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 112 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 213
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 223
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 233
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLIV 243
L N N G L N N G L N N G L N C+T + +
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 37/93 (39%)
Query: 152 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
L N N L N N G L N N G L N N G L N N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
L N N G L N N G L N N G +P
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLP 1311
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S++ L N N G L N N G L N N G L N N G L N N G L N N
Sbjct: 1225 MSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGEKLSNVN 1284
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGL 103
G L N N G L N N G L N C+T + +
Sbjct: 1285 MSGEKLSNVNMSGEKLSNVNMSGEKLPNICSTNEVQI 1321
>gi|289572891|ref|ZP_06453118.1| PE family protein [Mycobacterium tuberculosis K85]
gi|289537322|gb|EFD41900.1| PE family protein [Mycobacterium tuberculosis K85]
Length = 1147
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 338 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 397
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 398 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 457
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NT N NTG + NTG + NTG L +
Sbjct: 458 ANFGIANSGSFNTGLGNTGSTNTSLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 517
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 518 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 554
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 790 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 849
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 850 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 909
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 910 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 969
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 970 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 1029
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 1030 TGAFITGSYSNG 1041
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 95/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 331 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 387
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 388 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 447
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NT N NTG + NTG +
Sbjct: 448 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTSLFNPGNVNTGVGNTGSINTGSFNTGS 507
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 508 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 553
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 811 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 870
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 871 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 930
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 931 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 990
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 991 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 1049
Query: 249 G 249
G
Sbjct: 1050 G 1050
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 109/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 346 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 405
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 406 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 465
Query: 127 NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NT N NTG + NTG + NTG L + NTG
Sbjct: 466 GSFNTGLGNTGSTNTSLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 525
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 526 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 580
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 581 PEIPY--RYDLSVPIDIPITGTVVATTPN 607
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 774 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 833
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 834 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 893
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 894 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 953
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 954 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 1013
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA S S
Sbjct: 1014 NTGDYNTGVANTGDVDTGAFITGSYS 1039
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 771 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 830
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 831 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 890
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 891 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 950
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 951 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 1003
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 199
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTGG N NTG N NTG + +TG I
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAFI 103
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 62/158 (39%), Gaps = 14/158 (8%)
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 169
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
+ NTGG N NTG N NTG + +TG N + G L R G
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAFISGNYSNGIL-WRGDYQG 119
Query: 230 GLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIK 267
+G L +P+ A N P + I
Sbjct: 120 LIGYSYA----LTIPEIP------AHLDVNIPIDIPIT 147
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 79
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 89
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 99
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 109
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 119
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 129
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 139
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 149
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 159
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 68
G N TG G+ N TG G+ N + GL N NTGG N NTG + NT
Sbjct: 10 GFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNT 69
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
GG N NTG N NTG + +TG
Sbjct: 70 GGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
>gi|535260|emb|CAA82996.1| STARP antigen [Plasmodium reichenowi]
Length = 655
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 75/249 (30%), Gaps = 6/249 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
+ N T + N NT + N T + N NT + N NT N NT
Sbjct: 328 ISTDNSKTNVISKDNSNTHTISTDNSKTNVISTDNNNTDTISTDNDNTDTKATDNDNTDT 387
Query: 81 LGLRNCN-TGGLGLRNCNTGGLGLRNCNTGGLGLR----NCNTGGLGLRNCNTGGLGLRN 135
N N T N NT N N +T N NT N
Sbjct: 388 KATDNNNNTDTKATDNNNTDTKATDKSNNTDTKATDNNNNTDTKATDNNNTNTKATDSNN 447
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
NT N NT N NT N NT N NT N NT N
Sbjct: 448 TNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATDNNN 507
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENAS 255
NT N NT N NT N NT N K + + +N+
Sbjct: 508 TNTKATDNNNTNTKATDNNNTNTKATD-NNNNTNQYVFANNYDETTSDDKLNKDSCDNSE 566
Query: 256 RSENEPCLV 264
EN ++
Sbjct: 567 EKENIKSMI 575
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 73/255 (28%), Gaps = 24/255 (9%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTG-------------------GLGLRNCNTGG 50
TK N NT N NTG N NT + N T
Sbjct: 278 TKPTDNNNTNIKSTDNYNTGTKETDNKNTDIKATDNNNITITTDNTNTNVISTDNSKTNV 337
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTG 109
+ N NT + N T + N NT + N NT N NT N NT
Sbjct: 338 ISKDNSNTHTISTDNSKTNVISTDNNNTDTISTDNDNTDTKATDNDNTDTKATDNNNNTD 397
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLR----NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
N NT N N +T N NT N NT N
Sbjct: 398 TKATDNNNTDTKATDKSNNTDTKATDNNNNTDTKATDNNNTNTKATDSNNTNTKATDNNN 457
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
NT N NT N NT N NT N NT N NT N
Sbjct: 458 TNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATDNNN 517
Query: 226 CNTGGLGLRNCNTGG 240
NT N NT
Sbjct: 518 TNTKATDNNNTNTKA 532
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 33/108 (30%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +T N NT N NT N NT N NT N NT
Sbjct: 427 NTDTKATDNNNTNTKATDSNNTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATDNN 486
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
N NT N NT N NT N NT N NT
Sbjct: 487 NTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATD 534
>gi|31791483|ref|NP_853976.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|121636219|ref|YP_976442.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988692|ref|YP_002643379.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378770052|ref|YP_005169785.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449062300|ref|YP_007429383.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|31617069|emb|CAD93176.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491866|emb|CAL70329.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771805|dbj|BAH24611.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600235|emb|CCC62905.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356592373|gb|AET17602.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449030808|gb|AGE66235.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1147
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 92/217 (42%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 338 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 397
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G +G+ TG +G + N+G +GL N G +G N TG +G+ N T
Sbjct: 398 IGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 457
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NT N NTG + NTG + NTG L +
Sbjct: 458 ANFGIANSGSFNTGLGNTGSTNTSLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 517
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 518 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 554
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 790 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 849
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 850 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 909
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 910 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNAGTGNFGLANSGGFN 969
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 970 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 1029
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 1030 TGAFITGSYSNG 1041
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 811 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 870
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 871 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 930
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 931 GLFNSGSGNIGFFNSGTGNVGIFNAGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 990
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 991 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 1049
Query: 249 G 249
G
Sbjct: 1050 G 1050
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 95/226 (42%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 331 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 387
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G +G+ TG +G + N+G +GL N G +G N T
Sbjct: 388 IGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 447
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NT N NTG + NTG +
Sbjct: 448 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTSLFNPGNVNTGVGNTGSINTGSFNTGS 507
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 508 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 553
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 109/269 (40%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 346 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 405
Query: 69 GGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G+ TG +G + N+G +GL N G +G N TG +G+ N T G+ N
Sbjct: 406 GNIGIGLTGTGQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 465
Query: 127 NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NT N NTG + NTG + NTG L + NTG
Sbjct: 466 GSFNTGLGNTGSTNTSLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 525
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 526 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 580
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 581 PEIPY--RYDLSVPIDIPITGTVVATTPN 607
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 774 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 833
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 834 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 893
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 894 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 953
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 954 NAGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 1013
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA S S
Sbjct: 1014 NTGDYNTGVANTGDVDTGAFITGSYS 1039
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 771 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 830
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 831 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 890
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 891 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 950
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 951 GIFNAGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 1003
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 199
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTGG N NTG N NTG + +TG I
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAFI 103
Score = 41.6 bits (96), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 62/158 (39%), Gaps = 14/158 (8%)
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 169
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
+ NTGG N NTG N NTG + +TG N + G L R G
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAFISGNYSNGIL-WRGDYQG 119
Query: 230 GLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIK 267
+G L +P+ A N P + I
Sbjct: 120 LIGYSYA----LTIPEIP------AHLDVNIPIDIPIT 147
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 79
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 89
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 99
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 109
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 119
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 129
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 139
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 149
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 159
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 68
G N TG G+ N TG G+ N + GL N NTGG N NTG + NT
Sbjct: 10 GFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNT 69
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
GG N NTG N NTG + +TG
Sbjct: 70 GGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
>gi|298523777|ref|ZP_07011186.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298493571|gb|EFI28865.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 1147
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 90/217 (41%), Gaps = 5/217 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N G+ N +G N +GL N +G N +G+ N +
Sbjct: 338 VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSAN 397
Query: 91 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G G+GL G G N + +GL N G +G N TG +G+ N T
Sbjct: 398 IGFANTGSGNIGIGLTGTVQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGT 457
Query: 149 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
G+ N + GL N NTG N NTG + NTG + NTG L +
Sbjct: 458 ANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGD 517
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + NTG + NTG N NTG I
Sbjct: 518 HNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFI 554
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 8 ISTKGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG 62
++ +G N G LG N NTG L N G L N GG +G+ N +G
Sbjct: 790 VANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIG 849
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGG 120
L N + +GL N LG N + +G N + LG N + +G N N G
Sbjct: 850 LANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIG 909
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---N 177
+GL G+G N + +GL N +G +G N TG +G+ N TG GL N N
Sbjct: 910 VGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFN 969
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
TG + NTG + NTG + NTGG + NTG L + NTG + +
Sbjct: 970 TGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVD 1029
Query: 238 TGGLIVPKSKRG 249
TG I G
Sbjct: 1030 TGAFITGSYSNG 1041
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
NTG L N G L N GG +G+ N +GL N + +GL N LG
Sbjct: 811 VNTGDSNLGIGNLGDLNFGGVNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGF 870
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 131
N + +G N + LG N + +G N N G+GL G+G N + +
Sbjct: 871 GNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNI 930
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 188
GL N +G +G N TG +G+ N TG GL N NTG + NTG + NT
Sbjct: 931 GLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNT 990
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G + NTGG + NTG L + NTG + +TG + + G +V +
Sbjct: 991 GSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAF-ITGSYSNGFLVSGDYQ 1049
Query: 249 G 249
G
Sbjct: 1050 G 1050
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 93/226 (41%), Gaps = 8/226 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N N +GL N G+ N +G N +GL N +G N
Sbjct: 331 AGLGNLN---VGLANLGGSNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYH 387
Query: 71 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G+ N + +G N +G G+GL G G N + +GL N G +G N T
Sbjct: 388 IGIANTGSANIGFANTGSGNIGIGLTGTVQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGT 447
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G +G+ N T G+ N + GL N NTG N NTG + NTG +
Sbjct: 448 GNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGS 507
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + NTG + NTG + NTG N NTG
Sbjct: 508 TNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAF 553
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 107/269 (39%), Gaps = 13/269 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N +G N +GL N +G N +G+ N + +G N +
Sbjct: 346 SNFGIGNTGIFNVGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGS 405
Query: 69 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G G+GL G G N + +GL N G +G N TG +G+ N T G+ N
Sbjct: 406 GNIGIGLTGTVQIGFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 465
Query: 127 NTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ GL N NTG N NTG + NTG + NTG L + NTG
Sbjct: 466 GSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNS 525
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTG + NTG N NTG + + G R G +GL + +
Sbjct: 526 GDYNTGYFNAGDYNTGVANTGNVNTGAF-ISGNYSNGFFWRGDYQGLIGLSTT----ITI 580
Query: 244 PKSKRGAQENASRSENEPCL-VKIKFTPN 271
P+ + + S + P + TPN
Sbjct: 581 PEIPY--RYDLSVPIDIPITGTVVATTPN 607
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 109/266 (40%), Gaps = 19/266 (7%)
Query: 11 KGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL NTG L L N GGL N G + + NTG L N G L N
Sbjct: 774 AGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGGVNI 833
Query: 69 GG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
GG +G+ N +GL N + +GL N LG N + +G N + LG N
Sbjct: 834 GGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANT 893
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLR 184
+ +G N +G+ G +G+ + N+G +GL N +G +G N TG +G+
Sbjct: 894 GSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIF 953
Query: 185 NCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N TG GL N NTG + NTG + NTGG + NTG L
Sbjct: 954 NTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 1013
Query: 232 GLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG GA S S
Sbjct: 1014 NTGDYNTGVANTGDVDTGAFITGSYS 1039
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 94/233 (40%), Gaps = 17/233 (7%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GL L N L N GGL N G + + NTG L N G L
Sbjct: 771 ANLAGLFLDNTGNLTLNFGVANQGGLNAGIGNLGSVNIGFVNTGDSNLGIGNLGDLNFGG 830
Query: 86 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N GG + NTG +GL N + +GL N LG N + +G N + LG
Sbjct: 831 VNIGGNNIGIANTGIFDIGLANLGSYNIGLANLGDDNLGFGNAGSYNIGFANFGSDNLGF 890
Query: 144 RNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N + +G N N G+GL G+G N + +GL N +G +G N TG +
Sbjct: 891 ANTGSYNIGFANTGNNNIGVGLTGNGQIGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNV 950
Query: 202 GLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N TG GL N NTG + NTG + NTGG
Sbjct: 951 GIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLNTGSFNPGSFNTGGF 1003
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 199
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
+ NTGG N NTG N NTG + +TG I
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAFI 103
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 62/158 (39%), Gaps = 14/158 (8%)
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 169
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
+ NTGG N NTG N NTG + +TG N + G L R G
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAFISGNYSNGIL-WRGDYQG 119
Query: 230 GLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIK 267
+G L +P+ A N P + I
Sbjct: 120 LIGYSYA----LTIPEIP------AHLDVNIPIDIPIT 147
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 79
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 89
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 99
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 109
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 119
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 129
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 139
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 149
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 159
+ N G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
+ NTGG N NTG N NTG + +TG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 68
G N TG G+ N TG G+ N + GL N NTGG N NTG + NT
Sbjct: 10 GFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNT 69
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
GG N NTG N NTG + +TG
Sbjct: 70 GGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
>gi|156382279|ref|XP_001632481.1| predicted protein [Nematostella vectensis]
gi|156219538|gb|EDO40418.1| predicted protein [Nematostella vectensis]
Length = 178
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
+T GL R +T GL R +T G+ R +T GL R +T GL + +T GL R
Sbjct: 1 STTGLLYRMTSTTGLLDRMTSTKGILYRMTSTAGLLDRMTSTKGLLDQMTSTKGLLDRMT 60
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
+T GL R +T GL R +T GL R +T GL + +T G+ R +T GL R
Sbjct: 61 STTGLLDRMTSTTGLLDRMTSTTGLLDRMASTKGLLDQMTSTTGILYRMTSTTGLLDRMT 120
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLG 192
+T GL R +T GL + +T GL R +T GL R C TG L TG L
Sbjct: 121 STTGLLDRMTSTTGLLDQMTSTTGLLDRMTSTTGLLDRMTCTTGLLDQMTSTTGLLD 177
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 86
+T GL R +T GL R +T G+ R +T GL R +T GL + +T GL R
Sbjct: 1 STTGLLYRMTSTTGLLDRMTSTKGILYRMTSTAGLLDRMTSTKGLLDQMTSTKGLLDRMT 60
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
+T GL R +T GL R +T GL R +T GL + +T G+ R +T GL R
Sbjct: 61 STTGLLDRMTSTTGLLDRMTSTTGLLDRMASTKGLLDQMTSTTGILYRMTSTTGLLDRMT 120
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLG 202
+T GL R +T GL + +T GL R +T GL R C TG L TG L
Sbjct: 121 STTGLLDRMTSTTGLLDQMTSTTGLLDRMTSTTGLLDRMTCTTGLLDQMTSTTGLLD 177
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 37 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 96
+T GL R +T GL R +T G+ R +T GL R +T GL + +T GL R
Sbjct: 1 STTGLLYRMTSTTGLLDRMTSTKGILYRMTSTAGLLDRMTSTKGLLDQMTSTKGLLDRMT 60
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
+T GL R +T GL R +T GL R +T GL + +T G+ R +T GL R
Sbjct: 61 STTGLLDRMTSTTGLLDRMTSTTGLLDRMASTKGLLDQMTSTTGILYRMTSTTGLLDRMT 120
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLG 212
+T GL R +T GL + +T GL R +T GL R C TG L TG L
Sbjct: 121 STTGLLDRMTSTTGLLDQMTSTTGLLDRMTSTTGLLDRMTCTTGLLDQMTSTTGLLD 177
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 47 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 106
+T GL R +T GL R +T G+ R +T GL R +T GL + +T GL R
Sbjct: 1 STTGLLYRMTSTTGLLDRMTSTKGILYRMTSTAGLLDRMTSTKGLLDQMTSTKGLLDRMT 60
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
+T GL R +T GL R +T GL R +T GL + +T G+ R +T GL R
Sbjct: 61 STTGLLDRMTSTTGLLDRMTSTTGLLDRMASTKGLLDQMTSTTGILYRMTSTTGLLDRMT 120
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLG 222
+T GL R +T GL + +T GL R +T GL R C TG L TG L
Sbjct: 121 STTGLLDRMTSTTGLLDQMTSTTGLLDRMTSTTGLLDRMTCTTGLLDQMTSTTGLLD 177
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Query: 57 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
+T GL R +T GL R +T G+ R +T GL R +T GL + +T GL R
Sbjct: 1 STTGLLYRMTSTTGLLDRMTSTKGILYRMTSTAGLLDRMTSTKGLLDQMTSTKGLLDRMT 60
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
+T GL R +T GL R +T GL R +T GL + +T G+ R +T GL R
Sbjct: 61 STTGLLDRMTSTTGLLDRMTSTTGLLDRMASTKGLLDQMTSTTGILYRMTSTTGLLDRMT 120
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLG 232
+T GL R +T GL + +T GL R +T GL R C TG L TG L
Sbjct: 121 STTGLLDRMTSTTGLLDQMTSTTGLLDRMTSTTGLLDRMTCTTGLLDQMTSTTGLLD 177
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+T GL R +T GL R +T G+ R +T GL R +T GL + +T GL R
Sbjct: 1 STTGLLYRMTSTTGLLDRMTSTKGILYRMTSTAGLLDRMTSTKGLLDQMTSTKGLLDRMT 60
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
+T GL R +T GL R +T GL R +T GL + +T G+ R +T GL R
Sbjct: 61 STTGLLDRMTSTTGLLDRMTSTTGLLDRMASTKGLLDQMTSTTGILYRMTSTTGLLDRMT 120
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGL 241
+T GL R +T GL + +T GL R +T GL R C TG L TG L
Sbjct: 121 STTGLLDRMTSTTGLLDQMTSTTGLLDRMTSTTGLLDRMTCTTGLLDQMTSTTGLL 176
>gi|121639277|ref|YP_979501.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991774|ref|YP_002646463.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378773138|ref|YP_005172871.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449065465|ref|YP_007432548.1| PPE family protein [first part] [Mycobacterium bovis BCG str. Korea
1168P]
gi|121494925|emb|CAL73411.1| PPE Family protein [first part] [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224774889|dbj|BAH27695.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341603302|emb|CCC65983.1| PPE Family protein [first part] [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|356595459|gb|AET20688.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449033973|gb|AGE69400.1| PPE family protein [first part] [Mycobacterium bovis BCG str. Korea
1168P]
Length = 432
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
+GL N + G N G +G N N G+GL + G+G N TG +GL N TG
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTGN 324
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
+G N TG G+ N G+ N T GL N N NTG + + + NTG
Sbjct: 325 VGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNA-------GNFNTGVVNVGSYNTGS 377
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
+ NTGG NTG L N NTG N NTG N N G L V
Sbjct: 378 FNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 430
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 75/166 (45%), Gaps = 3/166 (1%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
+GL N + G N G +G N N G+GL + G+G N TG +GL N TG
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTGN 324
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 157
+G N TG G+ N G+ N T GL N NTG + + + NTG + N
Sbjct: 325 VGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDTN 384
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
TGG NTG L N NTG N NTG N N G L +
Sbjct: 385 TGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 430
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 75/166 (45%), Gaps = 3/166 (1%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
+GL N + G N G +G N N G+GL + G+G N TG +GL N TG
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTGN 324
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 167
+G N TG G+ N G+ N T GL N NTG + + + NTG + N
Sbjct: 325 VGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDTN 384
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
TGG NTG L N NTG N NTG N N G L +
Sbjct: 385 TGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 430
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 75/166 (45%), Gaps = 3/166 (1%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
+GL N + G N G +G N N G+GL + G+G N TG +GL N TG
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTGN 324
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 177
+G N TG G+ N G+ N T GL N NTG + + + NTG + N
Sbjct: 325 VGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDTN 384
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
TGG NTG L N NTG N NTG N N G L +
Sbjct: 385 TGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 430
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL N + G N G +G N N G+GL + G+G N TG +GL N TG +
Sbjct: 266 GLGNAGSSNYGFANLGVGNIGFGNTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTGNV 325
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 128
G N TG G+ N G+ N T GL N NTG + + + NTG + NT
Sbjct: 326 GFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDTNT 385
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
GG NTG L N NTG N NTG N N G L +
Sbjct: 386 GGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 430
>gi|57116720|ref|YP_177715.1| PPE family protein PPE6 [Mycobacterium tuberculosis H37Rv]
gi|148660071|ref|YP_001281594.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|167967606|ref|ZP_02549883.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|397672096|ref|YP_006513631.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|7478716|pir||B70524 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
gi|148504223|gb|ABQ72032.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|395137001|gb|AFN48160.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444893781|emb|CCP43035.1| PPE family protein PPE6 [Mycobacterium tuberculosis H37Rv]
Length = 963
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 100/243 (41%), Gaps = 21/243 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTG-----------GLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
+ GL N +T L N+G GL N +G N +GL N
Sbjct: 577 TISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGANAGIFNVGLANLG 636
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+G N LG + + +G N + LG N +G N + +G+
Sbjct: 637 DYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTG 696
Query: 118 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+ N
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 176 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
+ GL N NTG L + NTG + + NTGG N NTG NTG L
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYF-----NTGDLQ 811
Query: 233 LRN 235
R+
Sbjct: 812 HRH 814
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 73/168 (43%), Gaps = 9/168 (5%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
LG N + LGL N GG + NTG G G N G+GL G G N
Sbjct: 230 LGFANLGSDNLGL--ANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNS 287
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGL 143
+ +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 288 GSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNP 347
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ NTG N NTG N NTG + NTG N NTG
Sbjct: 348 GSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 84/193 (43%), Gaps = 10/193 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N +G N LG + + +G N + LG N +G N
Sbjct: 627 IFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNLGFANTGDNNIGFANIG 686
Query: 68 TGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G+ +G +G + N+G +GL N G +GL N +G G+ N TG G+ N
Sbjct: 687 SNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGN 746
Query: 126 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
G G+ N + GL N NTG L + NTG + + NTGG N NTG
Sbjct: 747 SGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYF- 805
Query: 183 LRNCNTGGLGLRN 195
NTG L R+
Sbjct: 806 ----NTGDLQHRH 814
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 87/213 (40%), Gaps = 5/213 (2%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 87
+G L + +G G N G G+ N GL N +T L N+G L +
Sbjct: 546 SGFWNLASATSGLSGFGNVGALGSGVANVGNTISGLYNTSTSNLATPAFNSGLLH-HSVG 604
Query: 88 TGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
T L N GG +G N +GL N +G N LG + + +G N
Sbjct: 605 TMTLNFGLANVGGNNVGGANAGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFAN 664
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGL 203
+ LG N +G N + +G+ +G +G + N+G +GL N G +GL
Sbjct: 665 TGSNNLGFANTGDNNIGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGL 724
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N +G G+ N TG G+ N G G+ N
Sbjct: 725 FNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNA 757
>gi|306967856|ref|ZP_07480517.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu009]
gi|308354507|gb|EFP43358.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009]
Length = 493
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|307079765|ref|ZP_07488935.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu011]
gi|308362385|gb|EFP51236.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 491
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|449281692|gb|EMC88716.1| hypothetical protein A306_02409, partial [Columba livia]
Length = 197
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 63/192 (32%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
GG C GG+ C GG C GG+ C GG C GG+ C
Sbjct: 2 GGTSCLGCGMGGISCLGCEMGGTSCLGCGMGGISCLGCEMGGTSCLGCGMGGISCLGCEM 61
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
GG R C GG C GG C GG C GG C GG C
Sbjct: 62 GGTSCRGCGMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEM 121
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
GG C GG C GG C GG C GG C GG C
Sbjct: 122 GGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEI 181
Query: 199 GGLGLRNCNTGG 210
GG C GG
Sbjct: 182 GGTSCLMCEMGG 193
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 63/192 (32%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
GG C GG+ C GG C GG+ C GG C GG+ C
Sbjct: 2 GGTSCLGCGMGGISCLGCEMGGTSCLGCGMGGISCLGCEMGGTSCLGCGMGGISCLGCEM 61
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
GG R C GG C GG C GG C GG C GG C
Sbjct: 62 GGTSCRGCGMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEM 121
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
GG C GG C GG C GG C GG C GG C
Sbjct: 122 GGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEI 181
Query: 209 GGLGLRNCNTGG 220
GG C GG
Sbjct: 182 GGTSCLMCEMGG 193
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 63/192 (32%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
GG C GG+ C GG C GG+ C GG C GG+ C
Sbjct: 2 GGTSCLGCGMGGISCLGCEMGGTSCLGCGMGGISCLGCEMGGTSCLGCGMGGISCLGCEM 61
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
GG R C GG C GG C GG C GG C GG C
Sbjct: 62 GGTSCRGCGMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEM 121
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 218
GG C GG C GG C GG C GG C GG C
Sbjct: 122 GGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEI 181
Query: 219 GGLGLRNCNTGG 230
GG C GG
Sbjct: 182 GGTSCLMCEMGG 193
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 63/192 (32%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
GG C GG+ C GG C GG+ C GG C GG+ C
Sbjct: 2 GGTSCLGCGMGGISCLGCEMGGTSCLGCGMGGISCLGCEMGGTSCLGCGMGGISCLGCEM 61
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
GG R C GG C GG C GG C GG C GG C
Sbjct: 62 GGTSCRGCGMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEM 121
Query: 169 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 228
GG C GG C GG C GG C GG C GG C
Sbjct: 122 GGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEI 181
Query: 229 GGLGLRNCNTGG 240
GG C GG
Sbjct: 182 GGTSCLMCEMGG 193
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 61/185 (32%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C GG+ C GG C GG+ C GG C GG+ C GG R
Sbjct: 9 CGMGGISCLGCEMGGTSCLGCGMGGISCLGCEMGGTSCLGCGMGGISCLGCEMGGTSCRG 68
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C GG C GG C GG C GG C GG C GG
Sbjct: 69 CGMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEMGGTSCLG 128
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C GG C GG C GG C GG C GG C GG
Sbjct: 129 CGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEIGGTSCLM 188
Query: 196 CNTGG 200
C GG
Sbjct: 189 CEMGG 193
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 63/194 (32%), Gaps = 6/194 (3%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
GG C GG+ C GG C GG+ C GG C GG+ C
Sbjct: 2 GGTSCLGCGMGGISCLGCEMGGTSCLGCGMGGISCLGCEMGGTSCLGCGMGGISCLGCEM 61
Query: 119 GGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
GG R C G+G C GG C GG C GG C GG
Sbjct: 62 GGTSCRGC---GMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLG 118
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
C GG C GG C GG C GG C GG C GG
Sbjct: 119 CEMGGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEMGGTSCLGCGMGGTSCLG 178
Query: 236 CNTGGLIVPKSKRG 249
C GG + G
Sbjct: 179 CEIGGTSCLMCEMG 192
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 40/127 (31%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R C GG C GG C GG C GG C GG C GG
Sbjct: 67 RGCGMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEMGGTSC 126
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
C GG C GG C GG C GG C GG C GG
Sbjct: 127 LGCGMGGTSCLGCEIGGTSCLMCEMGGTSCLGCEMGGTSCLGCGMGGTSCLGCEIGGTSC 186
Query: 134 RNCNTGG 140
C GG
Sbjct: 187 LMCEMGG 193
>gi|289568217|ref|ZP_06448444.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289541970|gb|EFD45619.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 704
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 73/168 (43%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 138
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTG N NTG N NTG + NTG N NTG I
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 98
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 155
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 108
LG N + LGL N +G N + +G N N G+GL G G N +
Sbjct: 230 LGFANLGSDNLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGS 289
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRN 165
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG +
Sbjct: 290 HNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGS 349
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG + NTG N NTG
Sbjct: 350 YNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
>gi|434405193|ref|YP_007148078.1| putative low-complexity protein [Cylindrospermum stagnale PCC 7417]
gi|428259448|gb|AFZ25398.1| putative low-complexity protein [Cylindrospermum stagnale PCC 7417]
Length = 576
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 87/243 (35%), Gaps = 13/243 (5%)
Query: 3 PIVA--PISTKGLRN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 54
P+ A P K L + C+ LR N L N L + G LR
Sbjct: 33 PVYAEKPEQVKQLLDTNKCPKCDLSRANLRRRNLIRADLYQANLSSADLEGADLSGADLR 92
Query: 55 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 114
N + L N + L + N G L N G LRN N L N + G+ L
Sbjct: 93 NTDLSSAKLFRANLFRVDLGSANLSGADLSGVNLSGADLRNANLSSTNLSNADLNGVNL- 151
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
G+ N N G+ L N N G+ L + + LRN N G+ N L
Sbjct: 152 ----SGVNFSNANLRGVRLDNVNLRGVNLNGVDLSDVDLRNFNFNGVSFNGVNLSRANLN 207
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
N G+ LRN N L+N + L N G L + + G L N G L
Sbjct: 208 GFNLRGVELRNGNLSYANLQNADLSNAQLNGANLQGANLYSADLRGADLIGSNLSGASLG 267
Query: 235 NCN 237
N +
Sbjct: 268 NAD 270
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 83/218 (38%), Gaps = 15/218 (6%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A +S+ L + G LRN + L N + L + N G L N G LRN
Sbjct: 74 ANLSSADLEGADLSGADLRNTDLSSAKLFRANLFRVDLGSANLSGADLSGVNLSGADLRN 133
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
N L N + G+ L G+ N N G+ L N N G+ L + + LRN
Sbjct: 134 ANLSSTNLSNADLNGVNL-----SGVNFSNANLRGVRLDNVNLRGVNLNGVDLSDVDLRN 188
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+ G+ L N G LR G+ LRN N L+N + L
Sbjct: 189 FNFNGVSF-----NGVNLSRANLNGFNLR-----GVELRNGNLSYANLQNADLSNAQLNG 238
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
N G L + + G L N G L N + G L
Sbjct: 239 ANLQGANLYSADLRGADLIGSNLSGASLGNADLRGANL 276
>gi|443724315|gb|ELU12380.1| hypothetical protein CAPTEDRAFT_136084, partial [Capitella teleta]
Length = 397
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 93/256 (36%), Gaps = 22/256 (8%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT------------G 59
G+ C T G + C G G+ G G+ C G G+ C G
Sbjct: 8 GVDRCETEGGKVDRCEAEGGGVDRSEAEGGGVDRCEAEGGGVNRCEAEGGKVDRSEAENG 67
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNT--GGL------GLRNCNTGGLGLRNCNTGGL 111
G+ GG+ L C G G+ C GG+ G+ C G G+ C G
Sbjct: 68 GVDHGEAKGGGVDL--CVAEGGGVDRCEAEGGGVDRPEGGGVDRCEAEGGGVDRCEAEGG 125
Query: 112 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ C G G+ C G G+ C G G+ C G G+ C G+ + G
Sbjct: 126 RVDRCEAEGGGVDRCEAEGGGVDCCEAEGGGVDRCEAEGGGVDRCKAENGGVDHGEAEGG 185
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
+ C G G+ C T G + C G G+ G G+ C G G+ C G
Sbjct: 186 RVDRCEAEGGGVDRCETEGGKVDRCEAEGGGVDRSEAEGGGVDRCEAEGGGVDRCEAEGG 245
Query: 232 GLRNCNTGGLIVPKSK 247
G+ C G V +S+
Sbjct: 246 GVNRCEAEGGKVDRSE 261
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 86/237 (36%), Gaps = 12/237 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G+ C G G+ C G G+ C G G+ C G+ + G + C G
Sbjct: 136 GVDRCEAEGGGVDCCEAEGGGVDRCEAEGGGVDRCKAENGGVDHGEAEGGRVDRCEAEGG 195
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG- 130
G+ C T G + C G G+ G G+ C G G+ C G G+ C G
Sbjct: 196 GVDRCETEGGKVDRCEAEGGGVDRSEAEGGGVDRCEAEGGGVDRCEAEGGGVNRCEAEGG 255
Query: 131 -LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT--GGL------GLRNCNTGGL 181
+ GG+ GG+ L C G G+ C GG+ G+ C G
Sbjct: 256 KVDRSEAENGGVDHGEAKGGGVDL--CVAEGGGVDRCEAEGGGVDRPEGGGVDRCEAEGG 313
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G+ C G + C G G+ C G G C G G C G G+ +C
Sbjct: 314 GVDRCEAEGGRVDRCEAEGGGVDRCEAEGGGADCCEAKGGGADRCEAEGGGVDHCEA 370
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 86/237 (36%), Gaps = 12/237 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G+ C G G+ C G + C G G+ C G G+ C G G+ C G
Sbjct: 106 GVDRCEAEGGGVDRCEAEGGRVDRCEAEGGGVDRCEAEGGGVDCCEAEGGGVDRCEAEGG 165
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G+ C G+ + G + C G G+ C T G + C G G+ G
Sbjct: 166 GVDRCKAENGGVDHGEAEGGRVDRCEAEGGGVDRCETEGGKVDRCEAEGGGVDRSEAEGG 225
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
G+ C G G+ C G G+ C G + GG+ GG+ L C
Sbjct: 226 GVDRCEAEGGGVDRCEAEGGGVNRCEAEGGKVDRSEAENGGVDHGEAKGGGVDL--CVAE 283
Query: 190 GLGLRNCNT--GGL------GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G G+ C GG+ G+ C G G+ C G + C G G+ C
Sbjct: 284 GGGVDRCEAEGGGVDRPEGGGVDRCEAEGGGVDRCEAEGGRVDRCEAEGGGVDRCEA 340
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 83/229 (36%), Gaps = 6/229 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G+ C G G+ C G+ + G + C G G+ C T G + C G
Sbjct: 156 GVDRCEAEGGGVDRCKAENGGVDHGEAEGGRVDRCEAEGGGVDRCETEGGKVDRCEAEGG 215
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTG 129
G+ G G+ C G G+ C G G+ C G + GG+ G
Sbjct: 216 GVDRSEAEGGGVDRCEAEGGGVDRCEAEGGGVNRCEAEGGKVDRSEAENGGVDHGEAKGG 275
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
G+ L C G G+ C G G+ G G+ C G G+ C G + C
Sbjct: 276 GVDL--CVAEGGGVDRCEAEGGGVDRPEGG--GVDRCEAEGGGVDRCEAEGGRVDRCEAE 331
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G G+ C G G C G G C G G+ +C G G+ C
Sbjct: 332 GGGVDRCEAEGGGADCCEAKGGGADRCEAEGGGVDHCEAEGGGVDCCEA 380
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 89/238 (37%), Gaps = 8/238 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G+ + G G+ C G G+ C G G+ G G+ C G G+ C G
Sbjct: 68 GVDHGEAKGGGVDLCVAEGGGVDRCEAEGGGVDRPEGG--GVDRCEAEGGGVDRCEAEGG 125
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
+ C G G+ C G G+ C G G+ C G G+ C G+ + G
Sbjct: 126 RVDRCEAEGGGVDRCEAEGGGVDCCEAEGGGVDRCEAEGGGVDRCKAENGGVDHGEAEGG 185
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ C G G+ C T G + C G G+ G G+ C G G+ C G
Sbjct: 186 RVDRCEAEGGGVDRCETEGGKVDRCEAEGGGVDRSEAEGGGVDRCEAEGGGVDRCEAEGG 245
Query: 192 GLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT--GGLIVPK 245
G+ C G + GG+ GG+ L C G G+ C GG+ P+
Sbjct: 246 GVNRCEAEGGKVDRSEAENGGVDHGEAKGGGVDL--CVAEGGGVDRCEAEGGGVDRPE 301
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 76/204 (37%), Gaps = 4/204 (1%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
G G+ C G G+ C G + C G G+ C G G+ C G G+ C
Sbjct: 104 GGGVDRCEAEGGGVDRCEAEGGRVDRCEAEGGGVDRCEAEGGGVDCCEAEGGGVDRCEAE 163
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G G+ C G+ + G + C G G+ C T G + C G G+
Sbjct: 164 GGGVDRCKAENGGVDHGEAEGGRVDRCEAEGGGVDRCETEGGKVDRCEAEGGGVDRSEAE 223
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G G+ C G G+ C G G+ C G + GG+ GG+ L C
Sbjct: 224 GGGVDRCEAEGGGVDRCEAEGGGVNRCEAEGGKVDRSEAENGGVDHGEAKGGGVDL--CV 281
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGL 231
G G+ C G G+ GG+
Sbjct: 282 AEGGGVDRCEAEGGGVDRPEGGGV 305
>gi|289576075|ref|ZP_06456302.1| predicted protein [Mycobacterium tuberculosis K85]
gi|289540506|gb|EFD45084.1| predicted protein [Mycobacterium tuberculosis K85]
Length = 420
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 98/251 (39%), Gaps = 15/251 (5%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGG-------LGLRNCNTGGLGLRNCNTGGLGLRN 55
P+ P GL N GL N G +GL N G +GL N LG N
Sbjct: 148 PLGTPALVSGLGNVGDHLSGLLASNVGQNPITIVNIGLANVGNGNVGLGNIGNLNLGAAN 207
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
LG N LG N G +G N G N GL G +GL N
Sbjct: 208 IGDVNLGFGNIGDVNLGFGNIGGGNVGFGNIGDANFGFGNS---GLAAGLAGMGNIGLGN 264
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
+G +G N G +G N T G+GL N G+G N TG +GL N TG +G
Sbjct: 265 AGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGF 324
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGG 230
N T GL N + G+ N GL N NTG + NTG + NTGG
Sbjct: 325 FNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGG 384
Query: 231 LGLRNCNTGGL 241
+ NTG
Sbjct: 385 FNPGSTNTGWF 395
>gi|306775945|ref|ZP_07414282.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu001]
gi|308215584|gb|EFO74983.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length = 531
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|306784498|ref|ZP_07422820.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308330757|gb|EFP19608.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 543
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|306779763|ref|ZP_07418100.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308327310|gb|EFP16161.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 535
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|308380658|ref|ZP_07669239.1| hypothetical protein TMKG_04068, partial [Mycobacterium
tuberculosis SUMu011]
gi|308360808|gb|EFP49659.1| hypothetical protein TMKG_04068 [Mycobacterium tuberculosis
SUMu011]
Length = 310
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 16 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 75
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 76 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 135
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 136 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 174
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 16 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 75
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 76 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 135
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG N + G L
Sbjct: 136 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAL 183
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 16 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 75
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 76 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 135
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTGG + NTG L + NTG + NTG N + G L
Sbjct: 136 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAL 183
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 96
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 16 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 75
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 153
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 76 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 135
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG N + G L
Sbjct: 136 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAL 183
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 16 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 75
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 76 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 135
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTGG + NTG L + NTG + NTG N + G L
Sbjct: 136 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAL 183
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 16 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 75
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 173
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 76 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 135
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG N + G L
Sbjct: 136 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAL 183
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 16 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 75
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 76 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 135
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTGG + NTG L + NTG + NTG N + G L
Sbjct: 136 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAL 183
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 74/168 (44%), Gaps = 5/168 (2%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 16 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 75
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 193
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 76 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 135
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTGG + NTG L + NTG + NTG N + G L
Sbjct: 136 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAL 183
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 72/165 (43%), Gaps = 5/165 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 19 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 78
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 79 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 138
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG N + G L
Sbjct: 139 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAL 183
>gi|448677922|ref|ZP_21689112.1| pentapeptide repeat-containing protein [Haloarcula argentinensis
DSM 12282]
gi|445773597|gb|EMA24630.1| pentapeptide repeat-containing protein [Haloarcula argentinensis
DSM 12282]
Length = 428
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 65/186 (34%), Gaps = 10/186 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GLR + L N LR + G L + + G L+ + G L N G
Sbjct: 57 GLRGADLSDADLGKANLSSADLREADLSGADLGSADLSGANLQKADLSGADLSYANLSGA 116
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
L N + LR N G+ + LRN + L + G + G
Sbjct: 117 DLENADLSSADLRRTNLSGVKFVETDLADADLRNIDFSDTELVGTDLSGADFFATDLSGA 176
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
LR + + LR + G + GG L + N L + GG+ L + +
Sbjct: 177 DLRVADMSNVNLREADLSG-----ADLGGTDLSDANLREADLSGADLGGVDLSDAD---- 227
Query: 192 GLRNCN 197
LRN N
Sbjct: 228 -LRNTN 232
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 65/186 (34%), Gaps = 10/186 (5%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
GLR + L N LR + G L + + G L+ + G L N G
Sbjct: 57 GLRGADLSDADLGKANLSSADLREADLSGADLGSADLSGANLQKADLSGADLSYANLSGA 116
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
L N + LR N G+ + LRN + L + G + G
Sbjct: 117 DLENADLSSADLRRTNLSGVKFVETDLADADLRNIDFSDTELVGTDLSGADFFATDLSGA 176
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
LR + + LR + G + GG L + N L + GG+ L + +
Sbjct: 177 DLRVADMSNVNLREADLSG-----ADLGGTDLSDANLREADLSGADLGGVDLSDAD---- 227
Query: 202 GLRNCN 207
LRN N
Sbjct: 228 -LRNTN 232
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 65/186 (34%), Gaps = 10/186 (5%)
Query: 32 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 91
GLR + L N LR + G L + + G L+ + G L N G
Sbjct: 57 GLRGADLSDADLGKANLSSADLREADLSGADLGSADLSGANLQKADLSGADLSYANLSGA 116
Query: 92 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
L N + LR N G+ + LRN + L + G + G
Sbjct: 117 DLENADLSSADLRRTNLSGVKFVETDLADADLRNIDFSDTELVGTDLSGADFFATDLSGA 176
Query: 152 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
LR + + LR + G + GG L + N L + GG+ L + +
Sbjct: 177 DLRVADMSNVNLREADLSG-----ADLGGTDLSDANLREADLSGADLGGVDLSDAD---- 227
Query: 212 GLRNCN 217
LRN N
Sbjct: 228 -LRNTN 232
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 65/186 (34%), Gaps = 10/186 (5%)
Query: 42 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
GLR + L N LR + G L + + G L+ + G L N G
Sbjct: 57 GLRGADLSDADLGKANLSSADLREADLSGADLGSADLSGANLQKADLSGADLSYANLSGA 116
Query: 102 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
L N + LR N G+ + LRN + L + G + G
Sbjct: 117 DLENADLSSADLRRTNLSGVKFVETDLADADLRNIDFSDTELVGTDLSGADFFATDLSGA 176
Query: 162 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
LR + + LR + G + GG L + N L + GG+ L + +
Sbjct: 177 DLRVADMSNVNLREADLSG-----ADLGGTDLSDANLREADLSGADLGGVDLSDAD---- 227
Query: 222 GLRNCN 227
LRN N
Sbjct: 228 -LRNTN 232
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 65/186 (34%), Gaps = 10/186 (5%)
Query: 52 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
GLR + L N LR + G L + + G L+ + G L N G
Sbjct: 57 GLRGADLSDADLGKANLSSADLREADLSGADLGSADLSGANLQKADLSGADLSYANLSGA 116
Query: 112 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
L N + LR N G+ + LRN + L + G + G
Sbjct: 117 DLENADLSSADLRRTNLSGVKFVETDLADADLRNIDFSDTELVGTDLSGADFFATDLSGA 176
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
LR + + LR + G + GG L + N L + GG+ L + +
Sbjct: 177 DLRVADMSNVNLREADLSG-----ADLGGTDLSDANLREADLSGADLGGVDLSDAD---- 227
Query: 232 GLRNCN 237
LRN N
Sbjct: 228 -LRNTN 232
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 64/182 (35%), Gaps = 10/182 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A +S L N LR + G L + + G L+ + G L N G L N
Sbjct: 61 ADLSDADLGKANLSSADLREADLSGADLGSADLSGANLQKADLSGADLSYANLSGADLEN 120
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ LR N G+ + LRN + L + G + G LR
Sbjct: 121 ADLSSADLRRTNLSGVKFVETDLADADLRNIDFSDTELVGTDLSGADFFATDLSGADLRV 180
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
+ + LR + G + GG L + N L + GG+ L + + LRN
Sbjct: 181 ADMSNVNLREADLSG-----ADLGGTDLSDANLREADLSGADLGGVDLSDAD-----LRN 230
Query: 186 CN 187
N
Sbjct: 231 TN 232
>gi|306788863|ref|ZP_07427185.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu004]
gi|308334582|gb|EFP23433.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length = 554
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|308378283|ref|ZP_07668707.1| hypothetical protein TMIG_02869 [Mycobacterium tuberculosis
SUMu009]
gi|308353017|gb|EFP41868.1| hypothetical protein TMIG_02869 [Mycobacterium tuberculosis
SUMu009]
Length = 340
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 46 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 105
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 106 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 165
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 166 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 204
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 46 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 105
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 106 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 165
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 166 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 203
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 46 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 105
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 106 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 165
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 166 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 203
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 46 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 105
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 106 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 165
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 166 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 203
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 49 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 108
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 109 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 168
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 169 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 203
>gi|306797578|ref|ZP_07435880.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu006]
gi|308342080|gb|EFP30931.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006]
Length = 547
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|306803461|ref|ZP_07440129.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu008]
gi|308349871|gb|EFP38722.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008]
Length = 552
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|289445844|ref|ZP_06435588.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289418802|gb|EFD16003.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1003
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 97/235 (41%), Gaps = 12/235 (5%)
Query: 15 NCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
N N G L N GG +G N G G+ + LG N G LG N G G
Sbjct: 79 NLNVGFASLGGFNFGGATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFG 138
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGG 130
N G +G N LG N G +G N + +G N N G+GL G
Sbjct: 139 SYNIGFGNVGNDN-----LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIG 193
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCN 187
G N +G +GL N + +G N +G G+ N NTG N NTG + N
Sbjct: 194 FGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVN 253
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTG + NTGG N NTG L + N NTG + +TG I
Sbjct: 254 TGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAFI 308
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 90/218 (41%), Gaps = 10/218 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+T G N G G+ + LG N G LG N G G N G +G N
Sbjct: 95 ATIGHNNVGIGNTGIFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDN--- 151
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
LG N G +G N + +G N N G+GL G G N +G +GL N
Sbjct: 152 --LGFANAGGGNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNS 209
Query: 127 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ +G N +G G+ N NTG N NTG + NTG + NTG
Sbjct: 210 GSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNT 269
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTGG N NTG L + N NTG + +TG
Sbjct: 270 GSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 307
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 83/199 (41%), Gaps = 5/199 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I GL N + +G N LG N + +G N LG N G +G N
Sbjct: 109 IFDVGLANLGSYNIGFGNLGDDNLGFGNFGSYNIGFGNVGNDNLGFANAGGGNIGFANTG 168
Query: 68 TGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ +G N N G+GL G G N +G +GL N + +G N +G G+ N
Sbjct: 169 SNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIAN 228
Query: 126 C---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
NTG N NTG + NTG + NTG + NTGG N NTG L
Sbjct: 229 SGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLN 288
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ N NTG + +TG
Sbjct: 289 IGNYNTGIANTGDVDTGAF 307
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLR 64
+ G N +T L N+G L N +T GL +TG LGL N T +G+
Sbjct: 490 TVSGFYNTSTSDLATPAFNSG---LANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIA 546
Query: 65 NCNTGGLGLRNCNTGGLGLRNC---NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N +G N + G N N GG G+ + LG N G G N G
Sbjct: 547 NLGDYNIGFANLGSANFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFG 606
Query: 120 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLG 172
LG N G LG N NTG + NTG G+GL G G N +G +G
Sbjct: 607 NLGSYNVGFGNLGNDNLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIG 666
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 229
L N +G +G N G +G+ N T GL N NTG + NTG + NTG
Sbjct: 667 LFNSGSGNIGFFNSGNGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTG 726
Query: 230 GLGLRNCNTGGL 241
+ NTG
Sbjct: 727 SFNPGDSNTGDF 738
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 19/258 (7%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
+ P GL N +T GL +TG LGL N T +G+ N +G N +
Sbjct: 502 LATPAFNSGLANISTSIAGLLRDSTGTMVLNLGLANHGTLNVGIANLGDYNIGFANLGSA 561
Query: 60 GLGLRN--------CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G N NTG +GL N + +G N LG N + +G N
Sbjct: 562 NFGSANIGGNNIGGANTGIFDIGLANLGSYNIGFGNFGDDNLGFGNLGSYNVGFGNLGND 621
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCN 167
LG N + +G N + +G+ G +G + N+G +GL N +G +G N
Sbjct: 622 NLGFANTGSNNIGFANTGSNNIGIGLTGDGQIGFGSLNSGSGNIGLFNSGSGNIGFFNSG 681
Query: 168 TGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G +G+ N T GL N NTG + NTG + NTG + NTG
Sbjct: 682 NGNVGIGNTGTANFGLGNTGSTNTGFFNSGDVNTGIGNTGSFNTGSFNPGDSNTGDFNPG 741
Query: 225 NCNTGGLGLRNCNTGGLI 242
+ NTG + +TG I
Sbjct: 742 SYNTGLGNTGDVDTGAFI 759
>gi|256822896|ref|YP_003146859.1| pentapeptide repeat-containing protein [Kangiella koreensis DSM
16069]
gi|256796435|gb|ACV27091.1| pentapeptide repeat protein [Kangiella koreensis DSM 16069]
Length = 583
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 82/233 (35%), Gaps = 15/233 (6%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
+ N G LR + G L + G L + G+ L N L CN G L
Sbjct: 33 HANFDGQDLRGLDLSGCDLSEMSFVGANLAYSDLQGVALIASNLTDANLCYCNLSGAKLI 92
Query: 75 NCNTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
N L + N L + + LR+ + G LR N G LRN N
Sbjct: 93 AANLKQANLSHANLLHANLLTAICFRTDLSSVDLRDHDLRGQDLREANLSGADLRNQNLE 152
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-----NCNTGGLGLR 184
GL ++ G + N N L N + L +C G+ L+ N N GL L
Sbjct: 153 GLDMQGAKLIGAKMGNVNLRDTNLNKANLSDVDLSSCRIEGVTLKGANLSNANISGLDL- 211
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
G L N G LR+ N G L N L T G +RN +
Sbjct: 212 ----SGFNLNGVNFKGADLRSANLGRANLDNAILSATKLWQVQTNGWSIRNID 260
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 59/150 (39%), Gaps = 10/150 (6%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S+ LR+ + G LR N G LRN N GL ++ G + N N L N
Sbjct: 121 LSSVDLRDHDLRGQDLREANLSGADLRNQNLEGLDMQGAKLIGAKMGNVNLRDTNLNKAN 180
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
+ L +C G+ L+ N L N N GL L G L N G LR+ N
Sbjct: 181 LSDVDLSSCRIEGVTLKGAN-----LSNANISGLDL-----SGFNLNGVNFKGADLRSAN 230
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
G L N L T G +RN +
Sbjct: 231 LGRANLDNAILSATKLWQVQTNGWSIRNID 260
>gi|308379757|ref|ZP_07669041.1| hypothetical protein TMKG_02682 [Mycobacterium tuberculosis
SUMu011]
gi|308363760|gb|EFP52611.1| hypothetical protein TMKG_02682 [Mycobacterium tuberculosis
SUMu011]
Length = 887
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 617 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 676
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 677 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 736
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 737 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 796
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 797 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNG 856
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 857 FF-----WRGDYQGLGGFAYQSAVSEIPWS 881
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 108/257 (42%), Gaps = 19/257 (7%)
Query: 2 PPIVAPISTKGLRNC--------NTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTG 49
P + A ++ G+ N NTG + NTG G+GL N G G N
Sbjct: 74 PGLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIA 133
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN 107
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 134 NMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSG 193
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 194 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 253
Query: 168 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLG 222
+G +GL N TG +G+ N TG +G+ N TG G+ N GL N NTG
Sbjct: 254 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIAN 313
Query: 223 LRNCNTGGLGLRNCNTG 239
N NTG + NTG
Sbjct: 314 PGNHNTGLFNIGTFNTG 330
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 610 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 669
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 670 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 729
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 730 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 789
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 790 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 848
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 108/267 (40%), Gaps = 27/267 (10%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNC--------NTGG--LGLRNC--NTGGLGLRNCNTGG 50
P+ A I+ GL N G+ N NTG +GL N N G+GL G
Sbjct: 127 PLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSG 186
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
N G G N T GL N TG GL N TG +G+ N TGG G
Sbjct: 187 FSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF--------G 238
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+GL + G+G N + +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 239 VGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS---- 294
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N NTG L NTG N NTG + NTG + NTG + NTG
Sbjct: 295 ---GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGM 351
Query: 231 LGLRNCNTGGLIVPKSKRGAQENASRS 257
+ TG I G A R
Sbjct: 352 ANAGDYGTGAFITGSMNNGLLWRADRQ 378
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 103/246 (41%), Gaps = 19/246 (7%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRNC-------NTGGLGLRNCNTGGL 61
L N N G + N N GG + + N G G GL NTG + NTG
Sbjct: 42 LGNSNVGFGNIGNANIGGANIGDFNVGIANTGPGLTAAVNNIGIGNTGNYNIGVGNTGNY 101
Query: 62 GLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
+ NTG G+GL N G G N +GL N G+ N G+ N
Sbjct: 102 NIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIANMGLFNLGDNNFGMANAGNFNQGIANTG 161
Query: 118 TGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+GL N N G+GL G N G G N T GL N TG GL N
Sbjct: 162 NNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFN 221
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGL 233
TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N TG +G+
Sbjct: 222 SGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGI 281
Query: 234 RNCNTG 239
N TG
Sbjct: 282 GNTGTG 287
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 630 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 689
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 690 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 749
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLG 172
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 750 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFN 809
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG N NTG N NTG + NTG
Sbjct: 810 PGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 848
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 674 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 733
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 734 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 793
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 794 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 848
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 578 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 632
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 633 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 692
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 693 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 752
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 753 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 812
Query: 236 CNTGGL 241
NTGG
Sbjct: 813 YNTGGF 818
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 87/223 (39%), Gaps = 17/223 (7%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GL 91
N G + + N G L + N G L N N G + N N GG + + N G G
Sbjct: 15 ANLGQFNVGSANLGSANLGSANLGSANLGNSNVGFGNIGNANIGGANIGDFNVGIANTGP 74
Query: 92 GLRNC-------NTGGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGG 140
GL NTG + NTG + NTG G+GL N G G N
Sbjct: 75 GLTAAVNNIGIGNTGNYNIGVGNTGNYNIGFGNTGNNNIGIGLSGDNQIGFGPLNAGIAN 134
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNT 198
+GL N G+ N G+ N +GL N N G+GL G N
Sbjct: 135 MGLFNLGDNNFGMANAGNFNQGIANTGNNNIGLFNTGNNNVGIGLTGDGLSGFSSLNSGA 194
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G G N T GL N TG GL N TG +G+ N TGG
Sbjct: 195 GNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGF 237
>gi|289756420|ref|ZP_06515798.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289711984|gb|EFD75996.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 669
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 97/239 (40%), Gaps = 13/239 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 392 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 451
Query: 74 RN------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 125
N G +G N G +G+ N TG +G N G G+GL G G N
Sbjct: 452 GNVGPGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWN 511
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG 182
TG +GL N TG +G N TG G+ N G+ N + G N NTG
Sbjct: 512 SGTGNIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGN 571
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 572 SGDYNTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 630
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 399 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 458
Query: 66 -CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G +G+ N TG +G N G G+GL G G N TG +G
Sbjct: 459 TAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIG 518
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTG 179
L N TG +G N TG G+ N G+ N + G N NTG + NTG
Sbjct: 519 LFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTG 578
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTGG N NTG N NTG + NTG N + G
Sbjct: 579 LFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNG 638
Query: 240 GLIVPKSKRGAQENASRSENEPCLVKIKFT 269
RG + + + +I ++
Sbjct: 639 FF-----WRGDYQGLGGFAYQSAVSEIPWS 663
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CNTGGLGLRNCN 57
A I L + N G L + N G L + N G +G N G +G N
Sbjct: 412 ANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTG 471
Query: 58 TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G+ N TG +G N G G+GL G G N TG +GL N TG +G N
Sbjct: 472 NGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGN 531
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLG 172
TG G+ N G+ N + G N NTG + NTG N NTG
Sbjct: 532 SGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFN 591
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTGG N NTG N NTG + NTG
Sbjct: 592 PGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 630
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A I G N G +G+ N TG +G N G G+GL G G N TG
Sbjct: 456 PGLTAAIGNIGFGNTGNGNIGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTG 515
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNC 116
+GL N TG +G N TG G+ N G+ N + G N NTG +
Sbjct: 516 NIGLFNSGTGNIGFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDY 575
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG + NTGG N NTG N NTG + NTG
Sbjct: 576 NTGLFNAGNTNTGSFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 630
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 6 APISTKGLRNCNTGGLG-LRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
AP + GL N T G L+N T +GL N LG N + +G N + +
Sbjct: 360 APANVSGLLNIGTNLAGWLQNGPTETTFSVGLAN-----LGFWNLGSANIGNYNLGSANI 414
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGG 120
G+ N + +G N + +G N + +G N G +G G +G N G
Sbjct: 415 GVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAAIGNIGFGNTGNGN 474
Query: 121 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+G+ N TG +G N G G+GL G G N TG +GL N TG +G N T
Sbjct: 475 IGIGNTGTGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGT 534
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
G G+ N G+ N + G N NTG + NTG N NTG +
Sbjct: 535 GNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTGSFNPGD 594
Query: 236 CNTGGL 241
NTGG
Sbjct: 595 YNTGGF 600
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 71/167 (42%), Gaps = 9/167 (5%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG 150
+ N TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N TG
Sbjct: 1 MFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGN 60
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
+G+ N TG G+ N N NTG L NTG N NTG + NTG
Sbjct: 61 VGIGNTGTGNTGIGNS-------GNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGI 113
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRS 257
+ NTG + NTG + TG I G A R
Sbjct: 114 ANPGHYNTGSYNTGSYNTGMANAGDYGTGAFITGSMNNGLLWRADRQ 160
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG 70
+ N TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N TG
Sbjct: 1 MFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGN 60
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
+G+ N TG G+ N GL N NTG N NTG + NTG + N
Sbjct: 61 VGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYN 120
Query: 128 TGGLGLRNCNTG 139
TG + NTG
Sbjct: 121 TGSYNTGSYNTG 132
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG 80
+ N TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N TG
Sbjct: 1 MFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGN 60
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
+G+ N TG G+ N GL N NTG N NTG + NTG + N
Sbjct: 61 VGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYN 120
Query: 138 TGGLGLRNCNTG 149
TG + NTG
Sbjct: 121 TGSYNTGSYNTG 132
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG 90
+ N TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N TG
Sbjct: 1 MFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGN 60
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
+G+ N TG G+ N GL N NTG N NTG + NTG + N
Sbjct: 61 VGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYN 120
Query: 148 TGGLGLRNCNTG 159
TG + NTG
Sbjct: 121 TGSYNTGSYNTG 132
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG 100
+ N TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N TG
Sbjct: 1 MFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGN 60
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
+G+ N TG G+ N GL N NTG N NTG + NTG + N
Sbjct: 61 VGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYN 120
Query: 158 TGGLGLRNCNTG 169
TG + NTG
Sbjct: 121 TGSYNTGSYNTG 132
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG 110
+ N TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N TG
Sbjct: 1 MFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGN 60
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
+G+ N TG G+ N GL N NTG N NTG + NTG + N
Sbjct: 61 VGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYN 120
Query: 168 TGGLGLRNCNTG 179
TG + NTG
Sbjct: 121 TGSYNTGSYNTG 132
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG 120
+ N TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N TG
Sbjct: 1 MFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGN 60
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G+ N TG G+ N GL N NTG N NTG + NTG + N
Sbjct: 61 VGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYN 120
Query: 178 TGGLGLRNCNTG 189
TG + NTG
Sbjct: 121 TGSYNTGSYNTG 132
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGG 130
+ N TG +G+ N TGG G+ +G+ N+G +GL N TG +G+ N TG
Sbjct: 1 MFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGN 60
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
+G+ N TG G+ N GL N NTG N NTG + NTG + N
Sbjct: 61 VGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYN 120
Query: 188 TGGLGLRNCNTG 199
TG + NTG
Sbjct: 121 TGSYNTGSYNTG 132
>gi|306805156|ref|ZP_07441824.1| hypothetical protein TMHG_02568 [Mycobacterium tuberculosis
SUMu008]
gi|308348309|gb|EFP37160.1| hypothetical protein TMHG_02568 [Mycobacterium tuberculosis
SUMu008]
Length = 512
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 91/215 (42%), Gaps = 10/215 (4%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 4 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 63
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 173
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 64 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 123
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 124 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 182
Query: 234 RNCNTGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
+T I+P+ A +AS + I+F
Sbjct: 183 SYTST---IIPEFTV-ANIHASGGAGPIIVPSIQF 213
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 4 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 63
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 64 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 123
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 124 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 182
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 183 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 215
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 4 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 63
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 64 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 123
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 124 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 182
Query: 194 RNCNT 198
+T
Sbjct: 183 SYTST 187
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 4 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 63
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 64 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 123
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 124 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 182
Query: 204 RNCNT 208
+T
Sbjct: 183 SYTST 187
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 7 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 66
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 67 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 126
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 127 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 185
Query: 187 NT 188
+T
Sbjct: 186 ST 187
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 121 LGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGL 173
+GL N G GL N G +G N +G G+GL N G G N +G +GL
Sbjct: 1 MGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGL 60
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 230
N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 61 FNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGS 120
Query: 231 LGLRNCNTGGL 241
NTGG
Sbjct: 121 FNAGQANTGGF 131
>gi|422812745|ref|ZP_16861129.1| PPE family protein, partial [Mycobacterium tuberculosis CDC1551A]
gi|323719734|gb|EGB28849.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 557
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|308375671|ref|ZP_07444707.2| LOW QUALITY PROTEIN: putative PPE family protein, partial
[Mycobacterium tuberculosis SUMu007]
gi|308345567|gb|EFP34418.1| LOW QUALITY PROTEIN: putative PPE family protein [Mycobacterium
tuberculosis SUMu007]
Length = 551
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|94503759|gb|ABF29690.1| VmcE [Mycoplasma capricolum subsp. capricolum]
Length = 315
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 71/239 (29%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
K GG G GG G GG G GG G GG G GG
Sbjct: 48 KEEEKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGG 107
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
G GG G GG G GG G GG G GG G GG
Sbjct: 108 SGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGG 167
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
G GG G GG G GG G GG G GG G GG
Sbjct: 168 SGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGG 227
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRG 249
G GG G GG G GG G GG G GG K G
Sbjct: 228 SGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEG 286
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 70/231 (30%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
GG G GG G GG G GG G GG G GG G
Sbjct: 66 GGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAE 125
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
GG G GG G GG G GG G GG G GG G
Sbjct: 126 GGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAE 185
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
GG G GG G GG G GG G GG G GG G
Sbjct: 186 GGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAE 245
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRG 249
GG G GG G GG G GG G GG K G
Sbjct: 246 GGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEGGSGTVKPAEG 296
>gi|306968018|ref|ZP_07480679.1| hypothetical protein TMIG_02163, partial [Mycobacterium
tuberculosis SUMu009]
gi|308354358|gb|EFP43209.1| hypothetical protein TMIG_02163 [Mycobacterium tuberculosis
SUMu009]
Length = 514
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 194 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 245
Query: 76 CNTGGLGLRNCNTG------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G +G N G N G +G N TG G+GL N
Sbjct: 246 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 305
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 306 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 365
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 366 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 423
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 261 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 315
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 316 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 375
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 376 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 422
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 148 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 205
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 206 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 257
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 258 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 312
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 313 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 370
>gi|308380659|ref|ZP_07490678.2| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu011]
gi|308360805|gb|EFP49656.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 426
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 412
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 121 LGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGL 173
+GL N G GL N G +G N +G G+GL N G G N +G +GL
Sbjct: 251 MGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGL 310
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 230
N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 311 FNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGS 370
Query: 231 LGLRNCNTGGL 241
NTGG
Sbjct: 371 FNAGEANTGGF 381
>gi|307084344|ref|ZP_07493457.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu012]
gi|308366041|gb|EFP54892.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
Length = 565
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|306793197|ref|ZP_07431499.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu005]
gi|308338373|gb|EFP27224.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
Length = 576
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|308372508|ref|ZP_07428912.2| hypothetical protein TMDG_03994, partial [Mycobacterium
tuberculosis SUMu004]
gi|308333013|gb|EFP21864.1| hypothetical protein TMDG_03994 [Mycobacterium tuberculosis
SUMu004]
Length = 519
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 91/215 (42%), Gaps = 10/215 (4%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 11 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 70
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 173
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 71 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 130
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 131 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 189
Query: 234 RNCNTGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
+T I+P+ A +AS + I+F
Sbjct: 190 SYTST---IIPEFTV-ANIHASGGAGPIIVPSIQF 220
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 11 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 70
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 71 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 130
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 131 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 189
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 190 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 222
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 11 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 70
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 71 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 130
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 131 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 189
Query: 194 RNCNT 198
+T
Sbjct: 190 SYTST 194
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 11 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 70
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 71 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 130
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 131 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 189
Query: 204 RNCNT 208
+T
Sbjct: 190 SYTST 194
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 14 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 73
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 74 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 133
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 134 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 192
Query: 187 NT 188
+T
Sbjct: 193 ST 194
>gi|306803629|ref|ZP_07440297.1| hypothetical protein TMHG_01093, partial [Mycobacterium
tuberculosis SUMu008]
gi|308349719|gb|EFP38570.1| hypothetical protein TMHG_01093 [Mycobacterium tuberculosis
SUMu008]
Length = 536
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 215 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 266
Query: 76 CNTGGLGLRNCNTG------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G +G N G N G +G N TG G+GL N
Sbjct: 267 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 326
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 327 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 386
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 387 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 444
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 282 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 336
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 337 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 396
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 397 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 443
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 169 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 226
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 227 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 278
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 279 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 333
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 334 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 391
>gi|298525254|ref|ZP_07012663.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
gi|298495048|gb|EFI30342.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
Length = 585
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|308378281|ref|ZP_07482109.2| hypothetical protein TMIG_02867 [Mycobacterium tuberculosis
SUMu009]
gi|308353033|gb|EFP41884.1| hypothetical protein TMIG_02867 [Mycobacterium tuberculosis
SUMu009]
Length = 512
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 91/215 (42%), Gaps = 10/215 (4%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 4 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 63
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 173
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 64 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 123
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 124 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 182
Query: 234 RNCNTGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
+T I+P+ A +AS + I+F
Sbjct: 183 SYTST---IIPEFTV-ANIHASGGAGPIIVPSIQF 213
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 4 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 63
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 64 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 123
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 124 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 182
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 183 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 215
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 4 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 63
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 64 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 123
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 124 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 182
Query: 194 RNCNT 198
+T
Sbjct: 183 SYTST 187
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 4 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 63
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 64 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 123
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 124 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 182
Query: 204 RNCNT 208
+T
Sbjct: 183 SYTST 187
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 7 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 66
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 67 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 126
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 127 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 185
Query: 187 NT 188
+T
Sbjct: 186 ST 187
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 121 LGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGL 173
+GL N G GL N G +G N +G G+GL N G G N +G +GL
Sbjct: 1 MGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGL 60
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 230
N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 61 FNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGS 120
Query: 231 LGLRNCNTGGL 241
NTGG
Sbjct: 121 FNAGQANTGGF 131
>gi|306972055|ref|ZP_07484716.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu010]
gi|308358461|gb|EFP47312.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
Length = 572
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|433632448|ref|YP_007266076.1| Conserved protein of unknown function, PPE family protein, PPE54
(fragment) [Mycobacterium canettii CIPT 140070010]
gi|432164041|emb|CCK61474.1| Conserved protein of unknown function, PPE family protein, PPE54
(fragment) [Mycobacterium canettii CIPT 140070010]
Length = 2105
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 99/235 (42%), Gaps = 19/235 (8%)
Query: 29 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 84
G +GL N G +GL N G +G N GL N G +G N TG G+GL
Sbjct: 1580 GNVGLANSGLTPGLMGLGNIGFGNVGSYNV-----GLANMGVGNIGFANTGTGNIGIGLT 1634
Query: 85 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 144
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1635 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1694
Query: 145 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1695 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1754
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNT--GGLGLRNCN----TGGLIVPKSKRGA 250
N + G L R G LG +T + N + G +IVP + A
Sbjct: 1755 ISGNYSNGAL-WRGDYQGLLGFSYTSTIIPEFTVANIHASGGVGPIIVPSIQFPA 1808
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 101/237 (42%), Gaps = 17/237 (7%)
Query: 39 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 94
G +GL N G +GL N G +G N GL N G +G N TG G+GL
Sbjct: 1580 GNVGLANSGLTPGLMGLGNIGFGNVGSYNV-----GLANMGVGNIGFANTGTGNIGIGLT 1634
Query: 95 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 154
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1635 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1694
Query: 155 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1695 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1754
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
N + G L R G LG +T I+P+ A +AS + I+F
Sbjct: 1755 ISGNYSNGAL-WRGDYQGLLGFSYTST---IIPEFTV-ANIHASGGVGPIIVPSIQF 1806
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 81/185 (43%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + +GL N G +G N TG G+GL N G G N +G +GL N
Sbjct: 1597 GNIGFGNVGSYNVGLANMGVGNIGFANTGTGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1656
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1657 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1716
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G L R G LG
Sbjct: 1717 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAL-WRGDYQGLLGF 1775
Query: 194 RNCNT 198
+T
Sbjct: 1776 SYTST 1780
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 69 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 124
G +GL N G +GL N G +G N GL N G +G N TG G+GL
Sbjct: 1004 GNVGLANSALTPGLMGLGNIGFGNVGSYNV-----GLANMGVGNIGFANTGTGNIGIGLT 1058
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1059 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1118
Query: 185 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1119 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1178
Query: 242 I 242
I
Sbjct: 1179 I 1179
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + +GL N G +G N TG G+GL N G G N +G +GL N TG
Sbjct: 1600 GFGNVGSYNVGLANMGVGNIGFANTGTGNIGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1659
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1660 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1719
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G L R G LG
Sbjct: 1720 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAL-WRGDYQGLLGFSYT 1778
Query: 187 NT 188
+T
Sbjct: 1779 ST 1780
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + +GL N G +G N TG G+GL N G G N +G +GL N
Sbjct: 1021 GNIGFGNVGSYNVGLANMGVGNIGFANTGTGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1080
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1081 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1140
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1141 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1178
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 29 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 84
G +GL N G +GL N G +G N GL N G +G N TG G+GL
Sbjct: 1004 GNVGLANSALTPGLMGLGNIGFGNVGSYNV-----GLANMGVGNIGFANTGTGNIGIGLT 1058
Query: 85 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 144
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1059 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1118
Query: 145 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1119 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1178
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G +GL N G +GL N G +G N GL N G +G N TG G+GL
Sbjct: 1004 GNVGLANSALTPGLMGLGNIGFGNVGSYNV-----GLANMGVGNIGFANTGTGNIGIGLT 1058
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1059 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1118
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1119 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1178
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + +GL N G +G N TG G+GL N G G N +G +GL N TG
Sbjct: 1024 GFGNVGSYNVGLANMGVGNIGFANTGTGNIGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1083
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1084 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1143
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1144 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1178
>gi|156330405|ref|XP_001619111.1| hypothetical protein NEMVEDRAFT_v1g152333 [Nematostella vectensis]
gi|156201633|gb|EDO27011.1| predicted protein [Nematostella vectensis]
Length = 128
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 68
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 78
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 88
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 98
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 108
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 118
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 128
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 138
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 148
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 158
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 168
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 169 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 178
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 188
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLG-LRNCNT 198
LR C T G LR C T G LR C T G L L LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSG 110
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 29/59 (49%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
S+ LR C G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 59 SSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
>gi|306779924|ref|ZP_07418261.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308327166|gb|EFP16017.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 538
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 220 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 271
Query: 76 CNTGGLGLRNCNTG------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G +G N G N G +G N TG G+GL N
Sbjct: 272 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 332 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 391
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 392 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 449
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 287 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 341
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 342 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 401
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 402 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 448
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 174 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 231
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 232 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 283
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 284 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 338
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 339 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 396
>gi|308380227|ref|ZP_07489132.2| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu011]
gi|308362191|gb|EFP51042.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 1102
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 794 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 845
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 846 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 905
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 906 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 965
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1023
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 861 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 915
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1022
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 748 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 805
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 806 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 857
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 858 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 912
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 913 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 970
>gi|308379078|ref|ZP_07484913.2| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu010]
gi|308358264|gb|EFP47115.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
Length = 1108
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 794 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 845
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 846 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 905
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 906 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 965
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1023
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 861 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 915
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1022
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 748 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 805
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 806 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 857
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 858 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 912
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 913 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 970
>gi|308370862|ref|ZP_07422988.2| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308330609|gb|EFP19460.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 568
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 233 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 284
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 285 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 344
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 345 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 404
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 405 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 462
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 300 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 354
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 355 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 414
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 415 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 461
Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 187 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 244
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 245 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 296
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 297 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 351
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 352 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 409
>gi|308231985|ref|ZP_07414480.2| PPE family protein, partial [Mycobacterium tuberculosis SUMu001]
gi|308215384|gb|EFO74783.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length = 1106
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 794 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 845
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 846 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 905
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 906 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 965
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1023
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 861 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 915
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1022
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 748 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 805
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 806 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 857
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 858 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 912
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 913 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 970
>gi|306808203|ref|ZP_07444871.1| hypothetical protein TMGG_00459, partial [Mycobacterium
tuberculosis SUMu007]
gi|308345416|gb|EFP34267.1| hypothetical protein TMGG_00459 [Mycobacterium tuberculosis
SUMu007]
Length = 897
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 561 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 612
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 613 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 672
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 673 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 732
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 733 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 790
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 628 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 682
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 683 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 742
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 743 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 789
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
G GL N G G N TG +GL N TG +G+ N TG G+ N T N G
Sbjct: 20 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTGIG 75
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G N G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 76 NTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTG 133
Query: 150 GLGLRNCNTGGL 161
N NTGG
Sbjct: 134 VGNTGNVNTGGF 145
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 515 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 572
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 573 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 624
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 625 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 679
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 680 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 737
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRNCN 67
GL N G G N TG +GL N TG +G+ N TG G+ N T G+G N
Sbjct: 22 GLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQAN 81
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG NTG N NTG L + NTG + NTG N NTG N N
Sbjct: 82 TGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVN 141
Query: 128 TGGL 131
TGG
Sbjct: 142 TGGF 145
>gi|148663206|ref|YP_001284729.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148507358|gb|ABQ75167.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 1947
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1617
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 1618 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 1650
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1617
Query: 194 RNCNT 198
+T
Sbjct: 1618 SYTST 1622
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1442 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1501
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1502 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1561
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1562 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 1620
Query: 187 NT 188
+T
Sbjct: 1621 ST 1622
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G +GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 1422 GNVGLANSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 1476
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1477 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1536
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1537 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 240 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 299
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 300 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 359
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 360 VVNAGSYNTGSFNAGEANTGGF 381
>gi|306789030|ref|ZP_07427352.1| hypothetical protein TMDG_03949, partial [Mycobacterium
tuberculosis SUMu004]
gi|308334436|gb|EFP23287.1| hypothetical protein TMDG_03949 [Mycobacterium tuberculosis
SUMu004]
Length = 1020
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 561 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 612
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 613 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 672
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 673 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 732
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 733 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 790
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 628 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 682
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 683 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 742
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 743 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 789
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
G GL N G G N TG +GL N TG +G+ N TG G+ N T N G
Sbjct: 20 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTGIG 75
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G N G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 76 NTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTG 133
Query: 150 GLGLRNCNTGGL 161
N NTGG
Sbjct: 134 VGNTGNVNTGGF 145
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 515 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 572
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 573 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 624
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 625 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 679
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 680 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 737
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRNCN 67
GL N G G N TG +GL N TG +G+ N TG G+ N T G+G N
Sbjct: 22 GLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQAN 81
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG NTG N NTG L + NTG + NTG N NTG N N
Sbjct: 82 TGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVN 141
Query: 128 TGGL 131
TGG
Sbjct: 142 TGGF 145
>gi|379029702|dbj|BAL67435.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 1942
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1612
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 1613 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 1645
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1612
Query: 194 RNCNT 198
+T
Sbjct: 1613 SYTST 1617
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1437 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1496
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1497 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1556
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1557 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 1615
Query: 187 NT 188
+T
Sbjct: 1616 ST 1617
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 371
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 372 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 1417 GNFGLGNSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 1471
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1472 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1531
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1532 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1591
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 235 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 294
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 295 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 354
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 355 VVNAGSYNTGSFNAGEANTGGF 376
>gi|422812913|ref|ZP_16861297.1| PPE family protein, partial [Mycobacterium tuberculosis CDC1551A]
gi|323719535|gb|EGB28660.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 1157
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 794 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 845
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 846 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 905
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 906 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 965
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1023
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 861 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 915
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1022
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 748 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 805
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 806 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 857
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 858 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 912
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 913 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 970
>gi|308372510|ref|ZP_07428915.2| LOW QUALITY PROTEIN: hypothetical protein TMDG_04044, partial
[Mycobacterium tuberculosis SUMu004]
gi|308332996|gb|EFP21847.1| LOW QUALITY PROTEIN: hypothetical protein TMDG_04044 [Mycobacterium
tuberculosis SUMu004]
Length = 553
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 15 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 74
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 75 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 134
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 173
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 15 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 74
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 75 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 134
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 172
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 15 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 74
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 75 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 134
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 172
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 96
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 15 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 74
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 153
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 75 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 134
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTGG + NTG L + NTG + NTG
Sbjct: 135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 172
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 15 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 74
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 75 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 134
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 172
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 15 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 74
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 173
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 75 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 134
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTGG + NTG L + NTG + NTG
Sbjct: 135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 172
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 15 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 74
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 75 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 134
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 172
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 15 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 74
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 193
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 75 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 134
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTGG + NTG L + NTG + NTG
Sbjct: 135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 172
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 18 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 77
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 78 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 137
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 138 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 172
>gi|306786223|ref|ZP_07424545.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308329165|gb|EFP18016.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 549
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 217 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 276
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 277 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 336
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 337 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 375
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 217 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 276
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 277 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 336
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 337 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 374
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 220 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 279
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 280 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 339
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 340 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 374
>gi|440582835|emb|CCG13238.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 1947
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1617
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 1618 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 1650
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1617
Query: 194 RNCNT 198
+T
Sbjct: 1618 SYTST 1622
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1442 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1501
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1502 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1561
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1562 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 1620
Query: 187 NT 188
+T
Sbjct: 1621 ST 1622
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 1422 GNFGLGNSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 1476
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1477 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1536
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1537 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 240 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 299
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 300 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 359
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 360 VVNAGSYNTGSFNAGEANTGGF 381
>gi|297731471|ref|ZP_06960589.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
Length = 1365
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 760 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 811
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 812 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 871
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 872 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 931
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 932 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 989
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 300
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 301 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 360
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 361 TGNVNTGGF 369
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 184 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 241
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 242 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 297
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 298 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 355
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 356 TGVGNTGNVNTGGF 369
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 827 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 881
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 882 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 941
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 942 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 988
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 714 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 771
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 772 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 823
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 824 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 878
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 879 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 936
>gi|385996217|ref|YP_005914515.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339296171|gb|AEJ48282.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 2909
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2600 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2659
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2660 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2719
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2720 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 2758
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1592
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 2182
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2600 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2659
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2660 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2719
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2720 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2778
Query: 194 RNCNT 198
+T
Sbjct: 2779 SYTST 2783
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2603 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2662
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2663 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2722
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2723 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2781
Query: 187 NT 188
+T
Sbjct: 2782 ST 2783
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 371
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 372 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1437 GFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1496
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1497 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1556
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1557 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2027 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2086
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2087 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2146
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 2147 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 40.0 bits (92), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 235 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 294
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 295 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 354
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 355 VVNAGSYNTGSFNAGEANTGGF 376
>gi|306973798|ref|ZP_07486459.1| hypothetical protein TMJG_04104, partial [Mycobacterium
tuberculosis SUMu010]
gi|308356853|gb|EFP45704.1| hypothetical protein TMJG_04104 [Mycobacterium tuberculosis
SUMu010]
Length = 231
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 72/165 (43%), Gaps = 5/165 (3%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 57 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 116
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 205
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 117 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 176
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
NTGG + NTG L + NTG + NTG I GA
Sbjct: 177 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGA 221
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 57 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 116
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 117 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 176
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 177 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 212
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 57 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 116
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 165
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 117 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 176
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 177 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 212
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 57 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 116
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 175
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 117 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 176
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTGG + NTG L + NTG + NTG
Sbjct: 177 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 212
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 57 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 116
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 185
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 117 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 176
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 177 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 212
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 57 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 116
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 117 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 176
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTGG + NTG L + NTG + NTG
Sbjct: 177 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 212
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 1 MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 58
+ P + + G N + GL N G +G N +G G+GL N G G N +
Sbjct: 47 LTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGS 106
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 115
G +GL N TG +G N TG G+ N + G+ N GL N NTG + +
Sbjct: 107 GNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGS 166
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTG NTGG + NTG L + NTG + NTG
Sbjct: 167 YNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 212
>gi|156385593|ref|XP_001633714.1| predicted protein [Nematostella vectensis]
gi|156220788|gb|EDO41651.1| predicted protein [Nematostella vectensis]
Length = 181
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 58/177 (32%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G G N G G N G LG N G G N G G N G G
Sbjct: 5 VNKGASGSARVNKGASGSARVNKGALGSARVNKGASGSARVNKGASGSARVNKGASGSSR 64
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N G G R G + N G G N G G N G G N G LG
Sbjct: 65 VNKGASGERKGKQGCIWDVRVNMGAQGGARVNKGASGNARVNKGASGSARVNKGALGSAR 124
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
N G G N G G N G LG N G LG N G G + G G
Sbjct: 125 VNKGASGSTRVNKGASGSARVNKGALGSARVNKGALGSARVNKGASGSARVHWGAQG 181
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 58/177 (32%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N G G N G G N G LG N G G N G G N G G
Sbjct: 5 VNKGASGSARVNKGASGSARVNKGALGSARVNKGASGSARVNKGASGSARVNKGASGSSR 64
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
N G G R G + N G G N G G N G G N G LG
Sbjct: 65 VNKGASGERKGKQGCIWDVRVNMGAQGGARVNKGASGNARVNKGASGSARVNKGALGSAR 124
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 202
N G G N G G N G LG N G LG N G G + G G
Sbjct: 125 VNKGASGSTRVNKGASGSARVNKGALGSARVNKGALGSARVNKGASGSARVHWGAQG 181
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 58/177 (32%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 95
N G G N G G N G LG N G G N G G N G G
Sbjct: 5 VNKGASGSARVNKGASGSARVNKGALGSARVNKGASGSARVNKGASGSARVNKGASGSSR 64
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
N G G R G + N G G N G G N G G N G LG
Sbjct: 65 VNKGASGERKGKQGCIWDVRVNMGAQGGARVNKGASGNARVNKGASGSARVNKGALGSAR 124
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
N G G N G G N G LG N G LG N G G + G G
Sbjct: 125 VNKGASGSTRVNKGASGSARVNKGALGSARVNKGALGSARVNKGASGSARVHWGAQG 181
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 58/177 (32%)
Query: 46 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
N G G N G G N G LG N G G N G G N G G
Sbjct: 5 VNKGASGSARVNKGASGSARVNKGALGSARVNKGASGSARVNKGASGSARVNKGASGSSR 64
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
N G G R G + N G G N G G N G G N G LG
Sbjct: 65 VNKGASGERKGKQGCIWDVRVNMGAQGGARVNKGASGNARVNKGASGSARVNKGALGSAR 124
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
N G G N G G N G LG N G LG N G G + G G
Sbjct: 125 VNKGASGSTRVNKGASGSARVNKGALGSARVNKGALGSARVNKGASGSARVHWGAQG 181
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 58/177 (32%)
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
N G G N G G N G LG N G G N G G N G G
Sbjct: 5 VNKGASGSARVNKGASGSARVNKGALGSARVNKGASGSARVNKGASGSARVNKGASGSSR 64
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
N G G R G + N G G N G G N G G N G LG
Sbjct: 65 VNKGASGERKGKQGCIWDVRVNMGAQGGARVNKGASGNARVNKGASGSARVNKGALGSAR 124
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
N G G N G G N G LG N G LG N G G + G G
Sbjct: 125 VNKGASGSTRVNKGASGSARVNKGALGSARVNKGALGSARVNKGASGSARVHWGAQG 181
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 57/174 (32%)
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
N G G N G G N G LG N G G N G G N G G
Sbjct: 5 VNKGASGSARVNKGASGSARVNKGALGSARVNKGASGSARVNKGASGSARVNKGASGSSR 64
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G G R G + N G G N G G N G G N G LG
Sbjct: 65 VNKGASGERKGKQGCIWDVRVNMGAQGGARVNKGASGNARVNKGASGSARVNKGALGSAR 124
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N G G N G G N G LG N G LG N G G + G
Sbjct: 125 VNKGASGSTRVNKGASGSARVNKGALGSARVNKGALGSARVNKGASGSARVHWG 178
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 58/176 (32%)
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N G G N G G N G LG N G G N G G N G G
Sbjct: 5 VNKGASGSARVNKGASGSARVNKGALGSARVNKGASGSARVNKGASGSARVNKGASGSSR 64
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
N G G R G + N G G N G G N G G N G LG
Sbjct: 65 VNKGASGERKGKQGCIWDVRVNMGAQGGARVNKGASGNARVNKGASGSARVNKGALGSAR 124
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQ 251
N G G N G G N G LG N G LG N G + GAQ
Sbjct: 125 VNKGASGSTRVNKGASGSARVNKGALGSARVNKGALGSARVNKGASGSARVHWGAQ 180
>gi|254552450|ref|ZP_05142897.1| PPE family protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length = 1150
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 66 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 125
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 126 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 185
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 186 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 224
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 642 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 701
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 702 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 761
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 762 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 800
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 642 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 701
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 702 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 761
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 762 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 820
Query: 194 RNCNT 198
+T
Sbjct: 821 SYTST 825
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 66 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 125
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 126 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 185
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 186 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 223
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 66 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 125
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 126 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 185
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 186 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 223
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 645 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 704
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 705 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 764
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 765 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 823
Query: 187 NT 188
+T
Sbjct: 824 ST 825
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 69 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 128
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 129 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 188
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 189 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 223
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 49 GNFGLGNSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 103
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 104 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 163
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 164 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 223
>gi|424805908|ref|ZP_18231339.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|326905184|gb|EGE52117.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length = 3113
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2029 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2088
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2089 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2148
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2149 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 2187
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2605 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2664
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2665 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2724
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2725 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2783
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 2784 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 2816
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1597
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2029 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2088
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2089 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2148
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 2149 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2186
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2605 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2664
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2665 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2724
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNCN 237
NTGG + NTG L + NTG + NTG N + G GL +
Sbjct: 2725 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAFWRGDYQGLLGFS 2784
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
I+P+ A +AS + I+F
Sbjct: 2785 YTSTIIPEFTV-ANIHASGGAGPIIVPSIQF 2814
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2605 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2664
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2665 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2724
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2725 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2783
Query: 194 RNCNT 198
+T
Sbjct: 2784 SYTST 2788
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2605 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2664
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2665 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2724
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2725 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2783
Query: 204 RNCNT 208
+T
Sbjct: 2784 SYTST 2788
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2032 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2091
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2092 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2151
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 2152 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2186
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2608 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2667
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2668 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2727
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2728 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2786
Query: 187 NT 188
+T
Sbjct: 2787 ST 2788
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1442 GFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1501
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1502 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1561
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1562 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 240 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 299
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 300 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 359
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 360 VVNAGSYNTGSFNAGEANTGGF 381
>gi|294995888|ref|ZP_06801579.1| PPE family protein [Mycobacterium tuberculosis 210]
Length = 2511
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 2182
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1592
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 371
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 372 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2027 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2086
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2087 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2146
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 2147 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1437 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1496
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1497 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1556
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1557 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 235 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 294
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 295 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 354
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 355 VVNAGSYNTGSFNAGEANTGGF 376
>gi|313658804|ref|ZP_07815684.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
Length = 1399
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 794 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 845
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 846 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 905
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 906 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 965
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1023
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 861 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 915
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1022
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 748 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 805
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 806 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 857
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 858 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 912
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 913 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 970
>gi|254409552|ref|ZP_05023333.1| Pentapeptide repeat protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196183549|gb|EDX78532.1| Pentapeptide repeat protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 498
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 89/252 (35%), Gaps = 14/252 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNC---NTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTG 59
A +++ LR N L T L + N N LR L + N
Sbjct: 242 ADLTSASLREVNLSEANLSQASLSETTNLSMANLSGANLKAANLRKAKLMRTNLSHANLS 301
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNT-GGLGLRNCNTG------GLGLRNCNTGGLG 112
+ L + G L+ N L N T +G TG G+ L+N N G+
Sbjct: 302 QVNLIGTDLEGANLKEANLQQ-ALYNTTTIFPMGFDATQTGAYLIAPGVSLQNANLAGMN 360
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
L+ N G+ L+ N G L N G L+ + + L N N G L+ N
Sbjct: 361 LKTLNLSGVNLQEANLAGADLGQVNLSGANLQAADLCRVNLSNANLTGADLQGANLSAAN 420
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
L + N G L+ + L N G L + G N L++ G+
Sbjct: 421 LSSANLTGANLQQAKLSAVNLCYTNLNGATLSEADLRGAKFERTNLEQANLKDAKLDGVM 480
Query: 233 LRNCNTGGLIVP 244
L N N G I+P
Sbjct: 481 LNNANLNGAIMP 492
>gi|306805157|ref|ZP_07441825.1| hypothetical protein TMHG_02569, partial [Mycobacterium
tuberculosis SUMu008]
gi|308348294|gb|EFP37145.1| hypothetical protein TMHG_02569 [Mycobacterium tuberculosis
SUMu008]
Length = 599
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 301 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 360
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 361 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 420
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 421 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 459
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 301 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 360
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 361 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 420
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 421 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 458
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 304 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 363
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 364 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 423
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 424 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 458
>gi|289763535|ref|ZP_06522913.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
gi|289711041|gb|EFD75057.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
Length = 1134
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 36 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 95
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 96 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 155
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 156 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 194
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 626 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 685
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 686 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 745
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 746 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 784
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 626 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 685
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 686 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 745
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 746 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 804
Query: 194 RNCNT 198
+T
Sbjct: 805 SYTST 809
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 36 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 95
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 96 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 155
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 156 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 193
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 36 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 95
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 173
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 96 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 155
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTGG + NTG L + NTG + NTG
Sbjct: 156 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 193
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 36 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 95
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 96 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 155
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 156 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 193
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 36 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 95
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 193
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 96 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 155
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTGG + NTG L + NTG + NTG
Sbjct: 156 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 193
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 629 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 688
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 689 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 748
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 749 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 807
Query: 187 NT 188
+T
Sbjct: 808 ST 809
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 39 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 98
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 99 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 158
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 159 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 193
>gi|308373272|ref|ZP_07431668.2| hypothetical protein TMEG_01810, partial [Mycobacterium
tuberculosis SUMu005]
gi|308338231|gb|EFP27082.1| hypothetical protein TMEG_01810 [Mycobacterium tuberculosis
SUMu005]
Length = 587
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 251 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 302
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 303 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 362
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 363 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 422
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 423 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 480
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 318 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 372
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 373 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 432
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 433 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 479
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 205 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 262
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 263 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 314
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 315 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 369
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 370 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 427
>gi|385998693|ref|YP_005916991.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|344219739|gb|AEN00370.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length = 1388
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 783 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 834
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 835 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 894
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 895 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 954
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 955 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1012
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 383
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 384 TGNVNTGGF 392
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 850 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 904
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 905 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 964
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 965 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1011
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 737 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 794
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 795 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 846
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 847 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 901
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 902 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 959
>gi|297634483|ref|ZP_06952263.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length = 1388
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 783 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 834
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 835 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 894
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 895 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 954
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 955 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1012
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 383
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 384 TGNVNTGGF 392
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 850 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 904
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 905 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 964
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 965 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1011
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 737 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 794
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 795 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 846
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 847 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 901
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 902 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 959
>gi|379028170|dbj|BAL65903.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 1228
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 819 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 870
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 871 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 930
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 931 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 990
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 991 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1048
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 886 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 940
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 941 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1000
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 1001 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1047
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 773 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 830
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 831 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 882
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 883 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 937
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 938 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 995
>gi|385992585|ref|YP_005910883.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|339299778|gb|AEJ51888.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length = 3108
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 2182
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2600 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2659
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2660 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2719
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2720 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2778
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 2779 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 2811
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1592
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2600 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2659
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2660 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2719
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNCN 237
NTGG + NTG L + NTG + NTG N + G GL +
Sbjct: 2720 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAFWRGDYQGLLGFS 2779
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
I+P+ A +AS + I+F
Sbjct: 2780 YTSTIIPEFTV-ANIHASGGAGPIIVPSIQF 2809
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2600 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2659
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2660 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2719
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2720 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2778
Query: 194 RNCNT 198
+T
Sbjct: 2779 SYTST 2783
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2600 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2659
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2660 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2719
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2720 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2778
Query: 204 RNCNT 208
+T
Sbjct: 2779 SYTST 2783
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 371
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 372 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2027 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2086
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2087 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2146
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 2147 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2603 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2662
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2663 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2722
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2723 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2781
Query: 187 NT 188
+T
Sbjct: 2782 ST 2783
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1437 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1496
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1497 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1556
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1557 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 235 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 294
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 295 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 354
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 355 VVNAGSYNTGSFNAGEANTGGF 376
>gi|340628327|ref|YP_004746779.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340006517|emb|CCC45701.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length = 2538
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 90/213 (42%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + +GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2030 GNIGFGNAGSYNVGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 2089
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2090 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2149
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G L R G LG
Sbjct: 2150 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAL-WRGDYQGLLGF 2208
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
T + N + G +IVP + A
Sbjct: 2209 SYTGTIIPEFTVANIHASGGAGPIIVPSIQFPA 2241
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 69 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 124
G +GL N G +GL N G +G N GL N G +G N +G G+GL
Sbjct: 1422 GNVGLANSGLTPGLMGLGNIGFGNVGSYNV-----GLANMGVGNIGFANTGSGNIGIGLT 1476
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1477 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNSGIGNSGIASTGLF 1536
Query: 185 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1537 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Query: 242 I 242
I
Sbjct: 1597 I 1597
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 96/228 (42%), Gaps = 19/228 (8%)
Query: 59 GGLGLRNC-------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTG 109
G +GL N G +G N + +GL N G +G N +G G+GL N
Sbjct: 2013 GNVGLANSGLTPGLMGLGNIGFGNAGSYNVGLANMGVGNIGFANTGSGNIGIGLTGDNLT 2072
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 166
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 2073 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 2132
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 226
NTG + + NTG NTGG + NTG L + NTG + NTG N
Sbjct: 2133 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNY 2192
Query: 227 NTGGL------GLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
+ G L GL + G I+P+ A +AS + I+F
Sbjct: 2193 SNGALWRGDYQGLLGFSYTGTIIPEFTV-ANIHASGGAGPIIVPSIQF 2239
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + +GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2030 GNIGFGNAGSYNVGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 2089
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2090 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2149
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG N + G L
Sbjct: 2150 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAL 2197
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + +GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNVGSYNVGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNSGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 69 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 124
G +GL N G +GL N +G N + +GL N G +G N +G G+GL
Sbjct: 237 GNVGLANSGVAAGLMGLGN-----IGFGNAGSYNVGLANMGVGNIGFANTGSGNIGIGLS 291
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 292 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSHNSGIGNSGIASTGLF 351
Query: 185 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 352 NAGDFNTGLVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 411
Query: 242 I 242
I
Sbjct: 412 I 412
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 73/165 (44%), Gaps = 5/165 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + +GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2033 GFGNAGSYNVGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2092
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2093 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2152
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG N + G L
Sbjct: 2153 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAL 2197
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 29 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 84
G +GL N G +GL N G +G N GL N G +G N +G G+GL
Sbjct: 1422 GNVGLANSGLTPGLMGLGNIGFGNVGSYNV-----GLANMGVGNIGFANTGSGNIGIGLT 1476
Query: 85 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 144
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1477 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNSGIGNSGIASTGLF 1536
Query: 145 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1537 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G +GL N G +GL N G +G N GL N G +G N +G G+GL
Sbjct: 1422 GNVGLANSGLTPGLMGLGNIGFGNVGSYNV-----GLANMGVGNIGFANTGSGNIGIGLT 1476
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1477 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNSGIGNSGIASTGLF 1536
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1537 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + +GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1442 GFGNVGSYNVGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1501
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1502 NVGFFNSGTGNWGVFNSGSYNSGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1561
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1562 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 12 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N +G G+GL N G G N +G +GL N TG +G N TG
Sbjct: 267 GLANMGVGNIGFANTGSGNIGIGLSGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTG 326
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G+ N + G+ N GL N NTG + + NTG NTGG +
Sbjct: 327 NWGVFNSGSHNSGIGNSGIASTGLFNAGDFNTGLVNAGSYNTGSFNAGQANTGGFNPGSV 386
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGL 151
NTG L + NTG + NTG
Sbjct: 387 NTGWLNTGDTNTGVANSGDVNTGAF 411
>gi|289755469|ref|ZP_06514847.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289696056|gb|EFD63485.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length = 2102
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1594 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1653
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1654 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1713
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1714 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1772
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 1773 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 1805
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1018 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1077
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1078 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1137
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1138 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1176
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1594 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1653
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1654 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1713
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1714 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1772
Query: 194 RNCNT 198
+T
Sbjct: 1773 SYTST 1777
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1594 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1653
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1654 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1713
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1714 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1772
Query: 204 RNCNT 208
+T
Sbjct: 1773 SYTST 1777
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1018 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1077
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1078 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1137
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1138 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1175
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1018 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1077
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1078 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1137
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 1138 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1175
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1018 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1077
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1078 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1137
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1138 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1175
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1018 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1077
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 193
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1078 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1137
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTGG + NTG L + NTG + NTG
Sbjct: 1138 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1175
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1594 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1653
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1654 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1713
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNCN 237
NTGG + NTG L + NTG + NTG N + G GL +
Sbjct: 1714 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAFWRGDYQGLLGFS 1773
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
I+P+ A +AS + I+F
Sbjct: 1774 YTSTIIPEFTV-ANIHASGGAGPIIVPSIQF 1803
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1597 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1656
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1657 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1716
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1717 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 1775
Query: 187 NT 188
+T
Sbjct: 1776 ST 1777
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1021 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1080
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1081 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1140
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1141 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1175
>gi|313660329|ref|ZP_07817209.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
Length = 2532
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1592
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 2182
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2202
Query: 194 RNCNT 198
+T
Sbjct: 2203 SYTST 2207
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2027 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2086
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2087 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2146
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2147 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2205
Query: 187 NT 188
+T
Sbjct: 2206 ST 2207
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 371
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 372 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1437 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1496
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1497 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1556
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1557 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 1417 GNFGLGNSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 1471
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1472 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1531
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1532 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 235 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 294
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 295 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 354
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 355 VVNAGSYNTGSFNAGEANTGGF 376
>gi|253800388|ref|YP_003033389.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|297732997|ref|ZP_06962115.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|375297616|ref|YP_005101883.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392433827|ref|YP_006474871.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253321891|gb|ACT26494.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328460121|gb|AEB05544.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392055236|gb|AFM50794.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 2532
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1592
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 2182
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2202
Query: 194 RNCNT 198
+T
Sbjct: 2203 SYTST 2207
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2027 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2086
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2087 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2146
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2147 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2205
Query: 187 NT 188
+T
Sbjct: 2206 ST 2207
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 371
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 372 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1437 GFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1496
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1497 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1556
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1557 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 1417 GNFGLGNSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLT 1471
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1472 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1531
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1532 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 235 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 294
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 295 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 354
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 355 VVNAGSYNTGSFNAGEANTGGF 376
>gi|148824549|ref|YP_001289303.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|297636000|ref|ZP_06953780.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|148723076|gb|ABR07701.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 2532
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1592
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 2182
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2202
Query: 194 RNCNT 198
+T
Sbjct: 2203 SYTST 2207
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2027 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2086
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2087 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2146
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2147 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2205
Query: 187 NT 188
+T
Sbjct: 2206 ST 2207
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 371
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 372 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1437 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1496
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1497 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1556
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1557 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 1417 GNFGLGNSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 1471
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1472 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1531
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1532 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 235 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 294
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 295 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 354
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 355 VVNAGSYNTGSFNAGEANTGGF 376
>gi|254552452|ref|ZP_05142899.1| PPE family protein, partial [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length = 537
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 79 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 138
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 139 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 198
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 199 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 236
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 79 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 138
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 139 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 198
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 199 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 236
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 82 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 141
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 142 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 201
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 202 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 236
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 65 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 124
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 125 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 184
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 185 VVNAGSYNTGSFNAGEANTGGF 206
>gi|308377310|ref|ZP_07441826.2| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu008]
gi|308348293|gb|EFP37144.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008]
Length = 817
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 412
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 240 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 299
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 300 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 359
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 360 VVNAGSYNTGSFNAGEANTGGF 381
>gi|294996832|ref|ZP_06802523.1| PPE family protein [Mycobacterium tuberculosis 210]
Length = 670
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 165 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 216
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 217 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 276
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 277 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 336
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 337 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 394
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 232 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 286
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 287 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 346
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 347 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 393
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 119 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 176
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 177 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 228
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 229 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 283
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 284 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 341
>gi|15841389|ref|NP_336426.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13881624|gb|AAK46240.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
Length = 1491
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 794 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 845
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 846 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 905
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 906 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 965
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1023
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 861 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 915
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1022
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 748 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 805
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 806 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 857
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 858 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 912
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 913 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 970
>gi|386000137|ref|YP_005918436.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|344221184|gb|AEN01815.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length = 2537
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1597
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2029 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2088
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2089 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2148
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2149 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 2187
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2029 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2088
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2089 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2148
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2149 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2207
Query: 194 RNCNT 198
+T
Sbjct: 2208 SYTST 2212
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2032 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2091
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2092 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2151
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2152 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2210
Query: 187 NT 188
+T
Sbjct: 2211 ST 2212
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1442 GFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1501
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1502 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1561
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1562 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 1422 GNFGLGNSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLT 1476
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1477 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1536
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1537 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 240 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 299
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 300 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 359
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 360 VVNAGSYNTGSFNAGEANTGGF 381
>gi|253799036|ref|YP_003032037.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|375296286|ref|YP_005100553.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392432499|ref|YP_006473543.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253320539|gb|ACT25142.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328458791|gb|AEB04214.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392053908|gb|AFM49466.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 1399
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 794 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 845
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 846 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 905
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 906 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 965
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1023
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 861 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 915
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1022
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 748 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 805
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 806 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 857
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 858 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 912
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 913 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 970
>gi|31794533|ref|NP_857026.1| hypothetical protein Mb3385c [Mycobacterium bovis AF2122/97]
gi|31620129|emb|CAD95525.1| PPE FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97]
Length = 434
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 432
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 197 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 256
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N T G+GL + G+G N TG
Sbjct: 257 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 316
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 317 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 376
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 377 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 421
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 432
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 324
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 325 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 384
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 385 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 432
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 266 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 325
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 326 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 385
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 386 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 432
>gi|148823129|ref|YP_001287883.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|148721656|gb|ABR06281.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 1457
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 783 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 834
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 835 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 894
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 895 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 954
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 955 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1012
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 383
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 384 TGNVNTGGF 392
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 850 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 904
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 905 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 964
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 965 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1011
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 737 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 794
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 795 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 846
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 847 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 901
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 902 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 959
>gi|57117092|ref|YP_177960.1| PPE family protein PPE54 [Mycobacterium tuberculosis H37Rv]
gi|397675290|ref|YP_006516825.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|81400923|sp|Q6MWY2.1|PPE54_MYCTU RecName: Full=Uncharacterized PPE family protein PPE54
gi|395140195|gb|AFN51354.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444896898|emb|CCP46164.1| PPE family protein PPE54 [Mycobacterium tuberculosis H37Rv]
Length = 2523
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1597
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2134
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 2173
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2134
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2193
Query: 194 RNCNT 198
+T
Sbjct: 2194 SYTST 2198
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2018 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2077
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2078 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2137
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2138 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2196
Query: 187 NT 188
+T
Sbjct: 2197 ST 2198
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1442 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1501
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1502 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1561
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1562 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G +GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 1422 GNVGLANSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 1476
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1477 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1536
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1537 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 240 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 299
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 300 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 359
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 360 VVNAGSYNTGSFNAGEANTGGF 381
>gi|25395399|pir||E88035 protein M01D1.6 [imported] - Caenorhabditis elegans
Length = 581
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 96/259 (37%), Gaps = 8/259 (3%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL + T GL + T GL + T GL T GL T GL +
Sbjct: 263 LTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLATMGLTTMGLTTKG 322
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL T G + T GL T GL + T GL +
Sbjct: 323 LTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKG 382
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL T GL + T GL + T GL T GL
Sbjct: 383 LTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMG 442
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
T GL + T GL T GL T GL T GL T GL
Sbjct: 443 LTTKGLTTKGLTTKGLTTMGLTTMGLTTMGLTTMGLTTMGLTTMGLTTMGLTTKGL---- 498
Query: 246 SKRGAQENA--SRSENEPC 262
+ +G + A +R E EP
Sbjct: 499 TSQGVMDQAGVNRVEGEPI 517
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 87/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL T GL + T GL + T GL + T GL + T GL
Sbjct: 93 LTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMG 152
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL T GL T G + T GL T GL + T GL +
Sbjct: 153 LTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKG 212
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL T GL T GL T GL + T GL +
Sbjct: 213 LTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKG 272
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL T GL T GL + T GL
Sbjct: 273 LTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLATMGLTTMGLTTKGLTTKGL 328
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 87/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL + T G + T GL T GL T GL + T GL +
Sbjct: 63 LTTKGLTTKGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKG 122
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL + T GL T GL T GL T G +
Sbjct: 123 LTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLTTMGLATMGLTTKGLTTMGLTTKGFITKG 182
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL T GL + T GL + T GL + T GL T GL
Sbjct: 183 LTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMG 242
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL T GL + T GL + T GL + T GL + T GL
Sbjct: 243 LTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGL 298
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 87/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL T G + T GL T GL + T GL + T GL +
Sbjct: 163 LTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKG 222
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL T GL T GL T GL + T GL + T GL +
Sbjct: 223 FITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKG 282
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL T GL T GL + T GL + T GL
Sbjct: 283 LTTMGLTTKGFTTKGLTTMGLATMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMG 342
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T G + T GL T GL + T GL + T GL + T GL
Sbjct: 343 LTTKGFTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGL 398
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 85/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL T GL + T GL + T GL T GL T GL +
Sbjct: 13 LTTKGLTTMGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGVTTKGLTTMGLTTKGLTTKG 72
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T G + T GL T GL T GL + T GL + T GL +
Sbjct: 73 LTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKG 132
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL T GL T GL T G + T GL
Sbjct: 133 LTTMGLTTKGFTTKGLTTMGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMG 192
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL + T GL T GL T GL
Sbjct: 193 LTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGL 248
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 88/240 (36%), Gaps = 2/240 (0%)
Query: 4 IVAPISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
I ++T GL T GL + T GL + T GL + T GL T GL
Sbjct: 179 ITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGL 238
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
T GL T GL + T GL + T GL + T GL + T GL
Sbjct: 239 TTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGL 298
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
T GL T GL + T GL + T GL T G + T GL
Sbjct: 299 TTMGLATMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGL 358
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL + T GL T GL + T GL
Sbjct: 359 TTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGL 418
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 85/234 (36%), Gaps = 2/234 (0%)
Query: 10 TKGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
TKGL +GL T GL T GL + T GL + T GL +
Sbjct: 225 TKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLT 284
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T GL + T GL T GL T GL + T GL + T GL
Sbjct: 285 TMGLTTKGFTTKGLTTMGLATMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLT 344
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T G + T GL T GL + T GL + T GL + T GL
Sbjct: 345 TKGFTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLA 404
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL T GL T GL + T GL
Sbjct: 405 TMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGL 458
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 85/234 (36%), Gaps = 3/234 (1%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++TKGL T GL + T GL + T GL T GL T GL
Sbjct: 118 LTTKGL---TTKGLTTKGLTTMGLTTKGFTTKGLTTMGLTTMGLATMGLTTKGLTTMGLT 174
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T G + T GL T GL + T GL + T GL + T GL
Sbjct: 175 TKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLA 234
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL T GL T GL + T GL + T GL + T GL +
Sbjct: 235 TMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFT 294
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL T GL T GL + T GL + T GL T G
Sbjct: 295 TKGLTTMGLATMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGF 348
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 83/234 (35%), Gaps = 3/234 (1%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++TKGL GL + T GL T GL T GL + T G +
Sbjct: 28 LTTKGLTTM---GLTTKGFTTKGLTTMGVTTKGLTTMGLTTKGLTTKGLTTKGFTTKGLT 84
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T GL T GL T GL + T GL + T GL + T GL +
Sbjct: 85 TMGLATMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFT 144
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL T GL T GL T G + T GL T GL +
Sbjct: 145 TKGLTTMGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLT 204
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL T GL T GL T GL
Sbjct: 205 TKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGL 258
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 84/234 (35%), Gaps = 3/234 (1%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++TKGL GL + T GL T GL T GL T G +
Sbjct: 128 LTTKGLTTM---GLTTKGFTTKGLTTMGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLT 184
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T GL T GL + T GL + T GL + T GL T GL
Sbjct: 185 TMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLT 244
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL T GL + T GL + T GL + T GL + T GL
Sbjct: 245 TKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLA 304
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL T GL + T GL + T GL T G + T GL
Sbjct: 305 TMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGL 358
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 88/236 (37%), Gaps = 2/236 (0%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL + T GL + T GL T GL T GL T GL +
Sbjct: 203 LTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKG 262
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL + T GL + T GL T GL T GL +
Sbjct: 263 LTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLATMGLTTMGLTTKG 322
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL T G + T GL T GL + T GL +
Sbjct: 323 LTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKG 382
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL T GL + T GL + T GL T GL
Sbjct: 383 LTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGL 438
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 83/234 (35%), Gaps = 3/234 (1%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++T GL GL + T GL T GL + T GL + T GL
Sbjct: 233 LATMGLTTM---GLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLT 289
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T G + T GL T GL T GL + T GL + T GL +
Sbjct: 290 TKGFTTKGLTTMGLATMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFT 349
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL T GL + T GL + T GL T G + T GL
Sbjct: 350 TKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLT 409
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL T G + T GL T GL + T GL + T GL
Sbjct: 410 TKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGL 463
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 84/241 (34%), Gaps = 7/241 (2%)
Query: 8 ISTKGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
++TKG T GL T GL + T G + T GL T G
Sbjct: 38 LTTKGFTTKGLTTMGVTTKGLTTMGLTTKGLTTKGLTTKGFTTKGLTTMGLATMGLTTKG 97
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
L T GL + T GL + T GL + T GL + T GL T G
Sbjct: 98 LTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLTTMG 157
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L T GL T G + T GL T GL + T GL + T G
Sbjct: 158 LATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMG 217
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L + T GL T GL T GL T GL + T GL + T G
Sbjct: 218 LTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKG 277
Query: 241 L 241
L
Sbjct: 278 L 278
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 85/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++T GL T GL T GL + T GL + T GL + T GL +
Sbjct: 83 LTTMGLATMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKG 142
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL T GL T GL T G + T GL T GL +
Sbjct: 143 FTTKGLTTMGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKG 202
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL + T GL T GL T GL T GL +
Sbjct: 203 LTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKG 262
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL + T GL T GL T GL
Sbjct: 263 LTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLATMGLTTMGL 318
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 85/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKG + T GL T GL + T GL + T GL T GL
Sbjct: 138 LTTKGFTTKGLTTMGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMG 197
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL T G + T GL T GL + T GL
Sbjct: 198 LTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMG 257
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL + T GL T G + T GL T GL
Sbjct: 258 LTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLATMGLTTMG 317
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL + T GL T GL + T GL
Sbjct: 318 LTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLTTMGLTTKGLTTKGL 373
>gi|308376082|ref|ZP_07446012.2| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308344372|gb|EFP33223.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
Length = 1338
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 374 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 412
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 830 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 889
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 890 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 949
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 950 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 988
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 830 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 889
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 890 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 949
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 950 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1008
Query: 194 RNCNT 198
+T
Sbjct: 1009 SYTST 1013
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 374 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 833 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 892
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 893 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 952
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 953 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 1011
Query: 187 NT 188
+T
Sbjct: 1012 ST 1013
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
>gi|392386573|ref|YP_005308202.1| PPE34 [Mycobacterium tuberculosis UT205]
gi|378545124|emb|CCE37400.1| PPE34 [Mycobacterium tuberculosis UT205]
Length = 1445
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 794 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 845
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 846 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 905
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 906 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 965
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1023
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 861 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 915
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1022
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 748 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 805
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 806 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 857
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 858 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 912
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 913 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 970
>gi|289762071|ref|ZP_06521449.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|289709577|gb|EFD73593.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length = 1422
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 794 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 845
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 846 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 905
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 906 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 965
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 966 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1023
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 861 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 915
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1022
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 748 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 805
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 806 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 857
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 858 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 912
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 913 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 970
>gi|306797742|ref|ZP_07436044.1| hypothetical protein TMFG_01000, partial [Mycobacterium
tuberculosis SUMu006]
gi|308341936|gb|EFP30787.1| hypothetical protein TMFG_01000 [Mycobacterium tuberculosis
SUMu006]
Length = 703
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 202 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 253
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 254 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 313
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 314 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 373
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 374 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 431
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 269 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 323
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 324 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 383
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 384 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 430
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 156 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 213
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 214 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 265
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 266 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 320
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 321 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 378
>gi|254550933|ref|ZP_05141380.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length = 1388
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 783 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 834
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 835 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 894
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 895 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 954
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 955 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1012
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 383
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 384 TGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 850 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 904
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 905 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 964
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 965 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1011
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 737 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 794
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 795 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 846
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 847 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 901
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 902 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 959
>gi|289576071|ref|ZP_06456298.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289540502|gb|EFD45080.1| PPE family protein [Mycobacterium tuberculosis K85]
Length = 2523
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLAGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 1597
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2134
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2135 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 2173
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2134
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2135 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2193
Query: 194 RNCNT 198
+T
Sbjct: 2194 SYTST 2198
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLAGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLAGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLAGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 193
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 69 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 124
G +GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 237 GNVGLANSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 291
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 292 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 351
Query: 185 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 352 NAGGFNTGVVNAGSYNTGSFNAGEANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 411
Query: 242 I 242
I
Sbjct: 412 I 412
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2018 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2077
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2078 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2137
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2138 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2196
Query: 187 NT 188
+T
Sbjct: 2197 ST 2198
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1442 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLAGDNLTGFGGFNTGSGNVGLFNSGTG 1501
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1502 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1561
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1562 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 411
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 1425 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLAGDNLTGFG 1484
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 1485 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 1544
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 1545 VVNAGSYNTGSFNAGQANTGGF 1566
>gi|167970407|ref|ZP_02552684.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 1470
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 819 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 870
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 871 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 930
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 931 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 990
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 991 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1048
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 886 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 945
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 946 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1005
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1006 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1047
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 773 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 830
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 831 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 882
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 883 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 937
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 938 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 995
>gi|422814435|ref|ZP_16862800.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|323718016|gb|EGB27199.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 757
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 90/213 (42%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G L R G LG
Sbjct: 369 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGVL-WRGDYQGLLGF 427
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 428 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 460
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---------GLGLRNCNTGGLGLR 234
NTGG + NTG L + NTG + NTG G+ R G LG
Sbjct: 369 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGVLWRGDYQGLLGFS 428
Query: 235 NCNTGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
+T I+P+ A +AS + I+F
Sbjct: 429 YTST---IIPEFTV-ANIHASGGAGPIIVPSIQF 458
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 78/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 371
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G L R G LG
Sbjct: 372 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGVL-WRGDYQGLLGFSYT 430
Query: 187 NT 188
+T
Sbjct: 431 ST 432
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 235 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 294
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 295 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 354
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 355 VVNAGSYNTGSFNAGQANTGGF 376
>gi|339633354|ref|YP_004724996.1| PPE family protein [Mycobacterium africanum GM041182]
gi|339332710|emb|CCC28428.1| PPE family protein [Mycobacterium africanum GM041182]
Length = 2523
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 1597
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2134
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2135 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 2173
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2134
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2135 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2193
Query: 194 RNCNT 198
+T
Sbjct: 2194 SYTST 2198
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 80/181 (44%), Gaps = 12/181 (6%)
Query: 69 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 124
G +GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 237 GNVGLANSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 291
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 292 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 351
Query: 185 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 352 NAGGFNTGVVNAGSYNTGSFNAGEANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 411
Query: 242 I 242
I
Sbjct: 412 I 412
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2018 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2077
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2078 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2137
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2138 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2196
Query: 187 NT 188
+T
Sbjct: 2197 ST 2198
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 411
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1442 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1501
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1502 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1561
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1562 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 1422 GNFGLGNSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 1476
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1477 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1536
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1537 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 1596
>gi|306782401|ref|ZP_07420738.1| hypothetical protein TMBG_02042, partial [Mycobacterium
tuberculosis SUMu002]
gi|308324934|gb|EFP13785.1| hypothetical protein TMBG_02042 [Mycobacterium tuberculosis
SUMu002]
Length = 340
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 72/165 (43%), Gaps = 5/165 (3%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 162 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 221
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 205
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 222 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 281
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
NTGG + NTG L + NTG + NTG I GA
Sbjct: 282 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGA 326
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 162 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 221
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 222 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 281
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 282 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 317
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 163 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 222
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 223 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 282
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 283 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 317
>gi|254364736|ref|ZP_04980782.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150250|gb|EBA42295.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
Length = 1574
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 785 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 836
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 837 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 896
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 897 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 956
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 957 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1014
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 300
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 301 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 360
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 361 TGNVNTGGF 369
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 184 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 241
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 242 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 297
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 298 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 355
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 356 TGVGNTGNVNTGGF 369
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 852 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 911
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 912 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 971
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 972 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1013
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 739 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 796
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 797 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 848
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 849 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 903
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 904 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 961
>gi|298526820|ref|ZP_07014229.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496614|gb|EFI31908.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 2523
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2134
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2135 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 2173
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1597
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2134
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2135 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2193
Query: 194 RNCNT 198
+T
Sbjct: 2194 SYTST 2198
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2018 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2077
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2078 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2137
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2138 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2196
Query: 187 NT 188
+T
Sbjct: 2197 ST 2198
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1442 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1501
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1502 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1561
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1562 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 240 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 299
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 300 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 359
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 360 VVNAGSYNTGSFNAGEANTGGF 381
>gi|254232092|ref|ZP_04925419.1| PPE family protein [Mycobacterium tuberculosis C]
gi|124601151|gb|EAY60161.1| PPE family protein [Mycobacterium tuberculosis C]
Length = 1436
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 785 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 836
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 837 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 896
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 897 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 956
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 957 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1014
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 300
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 301 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 360
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 361 TGNVNTGGF 369
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 184 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 241
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 242 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 297
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 298 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 355
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 356 TGVGNTGNVNTGGF 369
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 852 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 906
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 907 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 966
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 967 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1013
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 739 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 796
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 797 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 848
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 849 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 903
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 904 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 961
>gi|289447533|ref|ZP_06437277.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289420491|gb|EFD17692.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1346
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 964 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 1015
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 1016 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1075
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1076 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1135
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1136 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1193
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSATS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSATS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSATS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSATSYNTGIGN 334
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 392
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 393 GNTGNVNTGGF 403
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSATS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1031 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1090
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1091 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1150
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1151 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1192
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 918 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 975
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 976 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 1027
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 1028 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 1082
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1083 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1140
>gi|449266205|gb|EMC77290.1| hypothetical protein A306_15531, partial [Columba livia]
Length = 199
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
G G+R+ G G+R+ G G+ N T G G+R+ + + + T G G+R T
Sbjct: 64 GHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRR---MDMGDGRTDGHGVREGQTD 120
Query: 80 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 132
G +R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 121 GHRVREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHR 180
Query: 133 LRNCNTGGLGLRNCNTGG 150
+R T G G+R T G
Sbjct: 181 VREGQTDGHGVREGQTDG 198
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
G G+R+ G G+R+ G G+ N T G G+R+ + + + T G G+R T
Sbjct: 64 GHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRR---MDMGDGRTDGHGVREGQTD 120
Query: 90 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 142
G +R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 121 GHRVREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHR 180
Query: 143 LRNCNTGGLGLRNCNTGG 160
+R T G G+R T G
Sbjct: 181 VREGQTDGHGVREGQTDG 198
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 99
G G+R+ G G+R+ G G+ N T G G+R+ + + + T G G+R T
Sbjct: 64 GHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRR---MDMGDGRTDGHGVREGQTD 120
Query: 100 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 152
G +R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 121 GHRVREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHR 180
Query: 153 LRNCNTGGLGLRNCNTGG 170
+R T G G+R T G
Sbjct: 181 VREGQTDGHGVREGQTDG 198
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G G+R+ G G+R+ G G+ N T G G+R+ + + + T G G+R T
Sbjct: 64 GHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRR---MDMGDGRTDGHGVREGQTD 120
Query: 110 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 162
G +R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 121 GHRVREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHR 180
Query: 163 LRNCNTGGLGLRNCNTGG 180
+R T G G+R T G
Sbjct: 181 VREGQTDGHGVREGQTDG 198
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
G G+R+ G G+R+ G G+ N T G G+R+ + + + T G G+R T
Sbjct: 64 GHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRR---MDMGDGRTDGHGVREGQTD 120
Query: 120 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 172
G +R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 121 GHRVREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHR 180
Query: 173 LRNCNTGGLGLRNCNTGG 190
+R T G G+R T G
Sbjct: 181 VREGQTDGHGVREGQTDG 198
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G G+R+ G G+R+ G G+ N T G G+R+ + + + T G G+R T
Sbjct: 64 GHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRR---MDMGDGRTDGHGVREGQTD 120
Query: 130 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 182
G +R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 121 GHRVREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHR 180
Query: 183 LRNCNTGGLGLRNCNTGG 200
+R T G G+R T G
Sbjct: 181 VREGQTDGHGVREGQTDG 198
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G G+R+ G G+R+ G G+ N T G G+R+ + + + T G G+R T
Sbjct: 64 GHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRR---MDMGDGRTDGHGVREGQTD 120
Query: 140 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 192
G +R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 121 GHRVREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHR 180
Query: 193 LRNCNTGGLGLRNCNTGG 210
+R T G G+R T G
Sbjct: 181 VREGQTDGHGVREGQTDG 198
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G G+R+ G G+R+ G G+ N T G G+R+ + + + T G G+R T
Sbjct: 64 GHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRR---MDMGDGRTDGHGVREGQTD 120
Query: 150 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 202
G +R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 121 GHRVREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHR 180
Query: 203 LRNCNTGGLGLRNCNTGG 220
+R T G G+R T G
Sbjct: 181 VREGQTDGHGVREGQTDG 198
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
G G+R+ G G+R+ G G+ N T G G+R+ + + + T G G+R T
Sbjct: 64 GHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRR---MDMGDGRTDGHGVREGQTD 120
Query: 160 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 212
G +R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 121 GHRVREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHR 180
Query: 213 LRNCNTGGLGLRNCNTGG 230
+R T G G+R T G
Sbjct: 181 VREGQTDGHGVREGQTDG 198
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
G G+R+ G G+R+ G G+ N T G G+R+ + + + T G G+R T
Sbjct: 64 GHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRR---MDMGDGRTDGHGVREGQTD 120
Query: 170 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 222
G +R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 121 GHRVREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHR 180
Query: 223 LRNCNTGGLGLRNCNTGG 240
+R T G G+R T G
Sbjct: 181 VREGQTDGHGVREGQTDG 198
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-------TGGLGLRNCNTG 59
+ G+R+ G G+R+ G G+ N T G G+R+ T G G+R T
Sbjct: 61 QLDGHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRRMDMGDGRTDGHGVREGQTD 120
Query: 60 GLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 112
G +R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 121 GHRVREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHR 180
Query: 113 LRNCNTGGLGLRNCNTGG 130
+R T G G+R T G
Sbjct: 181 VREGQTDGHGVREGQTDG 198
>gi|289747163|ref|ZP_06506541.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289687691|gb|EFD55179.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 3108
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2600 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2659
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2660 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2719
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2720 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2778
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 2779 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 2811
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1592
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 2182
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2600 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2659
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2660 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2719
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNCN 237
NTGG + NTG L + NTG + NTG N + G GL +
Sbjct: 2720 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAFWRGDYQGLLGFS 2779
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
I+P+ A +AS + I+F
Sbjct: 2780 YTSTIIPEFTV-ANIHASGGAGPIIVPSIQF 2809
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2600 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2659
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2660 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2719
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2720 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2778
Query: 194 RNCNT 198
+T
Sbjct: 2779 SYTST 2783
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2600 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2659
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2660 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2719
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2720 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2778
Query: 204 RNCNT 208
+T
Sbjct: 2779 SYTST 2783
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 1554 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2024 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2083
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2084 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 2143
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 2144 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2603 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2662
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2663 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2722
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2723 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2781
Query: 187 NT 188
+T
Sbjct: 2782 ST 2783
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 371
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 372 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1437 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1496
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1497 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1556
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1557 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1591
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2027 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2086
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2087 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2146
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 2147 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 2181
>gi|386004866|ref|YP_005923145.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
gi|380725354|gb|AFE13149.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
Length = 1459
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 808 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 859
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 860 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 919
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 920 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 979
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 980 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1037
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 383
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 384 TGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 875 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 934
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 935 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 994
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 995 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1036
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 762 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 819
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 820 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 871
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 872 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 926
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 927 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 984
>gi|121639271|ref|YP_979495.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991768|ref|YP_002646457.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378773132|ref|YP_005172865.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449065454|ref|YP_007432537.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|121494919|emb|CAL73402.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224774883|dbj|BAH27689.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341603296|emb|CCC65974.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356595453|gb|AET20682.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449033962|gb|AGE69389.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1338
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 374 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 412
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 830 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 889
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 890 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 949
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 950 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 988
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 830 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 889
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 890 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 949
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 950 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1008
Query: 194 RNCNT 198
+T
Sbjct: 1009 SYTST 1013
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 411
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 833 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 892
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 893 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 952
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 953 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 1011
Query: 187 NT 188
+T
Sbjct: 1012 ST 1013
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 411
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 109 GGLGLRNC--NTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTG 159
G +GL N G +GL N G GL N G +G N +G G+GL N
Sbjct: 237 GNVGLANSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLT 296
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 216
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 297 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 356
Query: 217 NTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG + + NTG NTGG
Sbjct: 357 NTGVVNAGSYNTGSFNAGQANTGGF 381
>gi|31794527|ref|NP_857020.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31620123|emb|CAD95503.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length = 1338
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 374 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 412
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 830 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 889
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 890 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 949
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 950 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFI 988
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 830 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 889
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 890 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 949
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 950 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1008
Query: 194 RNCNT 198
+T
Sbjct: 1009 SYTST 1013
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 411
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 833 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 892
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 893 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 952
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 953 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 1011
Query: 187 NT 188
+T
Sbjct: 1012 ST 1013
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAF 411
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 109 GGLGLRNC--NTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTG 159
G +GL N G +GL N G GL N G +G N +G G+GL N
Sbjct: 237 GNVGLANSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLT 296
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 216
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 297 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 356
Query: 217 NTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG + + NTG NTGG
Sbjct: 357 NTGVVNAGSYNTGSFNAGQANTGGF 381
>gi|7478714|pir||B70520 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
Length = 1436
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 785 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 836
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 837 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 896
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 897 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 956
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 957 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1014
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 300
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 301 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 360
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 361 TGNVNTGGF 369
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 184 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 241
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 242 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 297
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 298 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 355
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 356 TGVGNTGNVNTGGF 369
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 10/167 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCN 67
T+ L N G +G N G N G +G N TG G+GL N G G N
Sbjct: 852 TEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSG 906
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
+G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 907 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 966
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG L N NTG L L + NTG + + NTG L
Sbjct: 967 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1013
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 739 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 796
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 797 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 848
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 849 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 903
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 904 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 961
>gi|289449036|ref|ZP_06438780.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289421994|gb|EFD19195.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1068
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 90/213 (42%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 513 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 572
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 573 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 632
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G L R G LG
Sbjct: 633 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGVL-WRGDYQGLLGF 691
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 692 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 724
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 513 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 572
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 573 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 632
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---------GLGLRNCNTGGLGLR 234
NTGG + NTG L + NTG + NTG G+ R G LG
Sbjct: 633 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGVLWRGDYQGLLGFS 692
Query: 235 NCNTGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
+T I+P+ A +AS + I+F
Sbjct: 693 YTST---IIPEFTV-ANIHASGGAGPIIVPSIQF 722
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 80/185 (43%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 513 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 572
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 573 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 632
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G L R G LG
Sbjct: 633 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGVL-WRGDYQGLLGF 691
Query: 194 RNCNT 198
+T
Sbjct: 692 SYTST 696
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 80/185 (43%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 513 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 572
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 573 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 632
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G L R G LG
Sbjct: 633 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGVL-WRGDYQGLLGF 691
Query: 204 RNCNT 208
+T
Sbjct: 692 SYTST 696
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 78/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 516 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 575
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 576 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 635
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G L R G LG
Sbjct: 636 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGVL-WRGDYQGLLGFSYT 694
Query: 187 NT 188
+T
Sbjct: 695 ST 696
>gi|289759492|ref|ZP_06518870.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289715056|gb|EFD79068.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 1184
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 676 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 735
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 736 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 795
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 796 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 854
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 855 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 887
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 100 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 159
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 160 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 219
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 220 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 258
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 676 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 735
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 736 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 795
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNCN 237
NTGG + NTG L + NTG + NTG N + G GL +
Sbjct: 796 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAFWRGDYQGLLGFS 855
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
I+P+ A +AS + I+F
Sbjct: 856 YTSTIIPEFTV-ANIHASGGAGPIIVPSIQF 885
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 676 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 735
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 736 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 795
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 796 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 854
Query: 194 RNCNT 198
+T
Sbjct: 855 SYTST 859
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 676 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 735
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 736 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 795
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 796 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 854
Query: 204 RNCNT 208
+T
Sbjct: 855 SYTST 859
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 100 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 159
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 160 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 219
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 220 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 257
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 100 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 159
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 160 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 219
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 220 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 257
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 100 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 159
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 160 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 219
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 220 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 257
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 100 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 159
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 160 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 219
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 220 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 257
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 679 GFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 738
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 739 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 798
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 799 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 857
Query: 187 NT 188
+T
Sbjct: 858 ST 859
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 103 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 162
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 163 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 222
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 223 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 257
>gi|289445006|ref|ZP_06434750.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289417925|gb|EFD15165.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 544
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 36 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 95
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 96 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 155
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 156 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 214
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 215 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 247
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 36 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 95
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 96 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 155
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNCN 237
NTGG + NTG L + NTG + NTG N + G GL +
Sbjct: 156 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAFWRGDYQGLLGFS 215
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
I+P+ A +AS + I+F
Sbjct: 216 YTSTIIPEFTV-ANIHASGGAGPIIVPSIQF 245
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 36 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 95
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 96 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 155
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 156 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 214
Query: 194 RNCNT 198
+T
Sbjct: 215 SYTST 219
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 36 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 95
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 96 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 155
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 156 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 214
Query: 204 RNCNT 208
+T
Sbjct: 215 SYTST 219
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 39 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 98
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 99 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 158
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 159 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 217
Query: 187 NT 188
+T
Sbjct: 218 ST 219
>gi|289571584|ref|ZP_06451811.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289545338|gb|EFD48986.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length = 509
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 101 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
GL N G +G N T G+GL G+G N G LGL N G +G N T
Sbjct: 17 WGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGT 76
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 215
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 77 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 136
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG N NTG N NTG +
Sbjct: 137 INTGWFNTGNANTGIANAGNVNTGAFV 163
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
GL N G +G N T G+GL G+G N G LGL N G +G N T
Sbjct: 17 WGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGT 76
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 77 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 136
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTG N NTG N NTG
Sbjct: 137 INTGWFNTGNANTGIANAGNVNTGAF 162
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
Query: 31 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
GL N G +G N T G+GL G+G N G LGL N G +G N T
Sbjct: 17 WGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGT 76
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 77 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 136
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG N NTG N NTG
Sbjct: 137 INTGWFNTGNANTGIANAGNVNTGAF 162
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
Query: 41 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
GL N G +G N T G+GL G+G N G LGL N G +G N T
Sbjct: 17 WGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGT 76
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 155
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 77 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 136
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG N NTG N NTG
Sbjct: 137 INTGWFNTGNANTGIANAGNVNTGAF 162
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
GL N G +G N T G+GL G+G N G LGL N G +G N T
Sbjct: 17 WGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGT 76
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 165
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 77 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 136
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG N NTG N NTG
Sbjct: 137 INTGWFNTGNANTGIANAGNVNTGAF 162
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
Query: 61 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
GL N G +G N T G+GL G+G N G LGL N G +G N T
Sbjct: 17 WGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGT 76
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 175
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 77 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 136
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTG N NTG N NTG
Sbjct: 137 INTGWFNTGNANTGIANAGNVNTGAF 162
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
GL N G +G N T G+GL G+G N G LGL N G +G N T
Sbjct: 17 WGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGT 76
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 185
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 77 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 136
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG N NTG N NTG
Sbjct: 137 INTGWFNTGNANTGIANAGNVNTGAF 162
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
Query: 81 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
GL N G +G N T G+GL G+G N G LGL N G +G N T
Sbjct: 17 WGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGT 76
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 77 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 136
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG N NTG N NTG
Sbjct: 137 INTGWFNTGNANTGIANAGNVNTGAF 162
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
Query: 91 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
GL N G +G N T G+GL G+G N G LGL N G +G N T
Sbjct: 17 WGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGT 76
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 205
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 77 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 136
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG N NTG N NTG
Sbjct: 137 INTGWFNTGNANTGIANAGNVNTGAF 162
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
GL N G +G N T G+GL G+G N G LGL N G +G N T
Sbjct: 17 WGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGT 76
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 125
G GL N + G+ N TG GL N GL N NTG + + NTGG +
Sbjct: 77 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGS 136
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGL 151
NTG N NTG N NTG
Sbjct: 137 INTGWFNTGNANTGIANAGNVNTGAF 162
>gi|57116928|ref|YP_177655.1| PPE family protein PPE34 [Mycobacterium tuberculosis H37Rv]
gi|148661725|ref|YP_001283248.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|397673785|ref|YP_006515320.1| hypothetical protein RVBD_1917c [Mycobacterium tuberculosis H37Rv]
gi|148505877|gb|ABQ73686.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|395138690|gb|AFN49849.1| hypothetical protein RVBD_1917c [Mycobacterium tuberculosis H37Rv]
gi|444895427|emb|CCP44684.1| PPE family protein PPE34 [Mycobacterium tuberculosis H37Rv]
Length = 1459
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 808 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 859
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 860 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 919
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 920 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 979
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 980 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1037
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 383
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 384 TGNVNTGGF 392
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 875 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 934
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 935 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 994
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 995 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1036
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 762 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 819
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 820 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 871
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 872 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 926
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 927 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 984
>gi|167537358|ref|XP_001750348.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771176|gb|EDQ84847.1| predicted protein [Monosiga brevicollis MX1]
Length = 1036
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 72/193 (37%), Gaps = 26/193 (13%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
+VAP S + LR GL + + LRN N L +C+ L+ CN G L
Sbjct: 845 LVAP-SQEALR---AQGLNFEGSDLSKMDLRNINFRFANLNDCDLSNSQLQGCNFEGASL 900
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNT-------GGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
+N LR CN L N + L C+ G R C+ +
Sbjct: 901 KNARLDNCDLRGCNFSRTILDNASVINGTFHDPSRILPRCSFEGASCRGCD-----FEDS 955
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
N +R + G LRNCN LR+CN G L C+ G CN G LR
Sbjct: 956 NFEDANMRVASFKGASLRNCN-----LRSCNLAGSDLSECDLSG-----CNLQGTNLRGT 1005
Query: 177 NTGGLGLRNCNTG 189
NT +T
Sbjct: 1006 NTQRAKFHKISTA 1018
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 50/143 (34%), Gaps = 27/143 (18%)
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
GL + + LRN N L +C+ L+ CN G L+N LR CN
Sbjct: 857 GLNFEGSDLSKMDLRNINFRFANLNDCDLSNSQLQGCNFEGASLKNARLDNCDLRGCNFS 916
Query: 180 GLGLRN-----------------CNTGGLG-----LRNCNTGGLGLRNCNTGGLGLRNCN 217
L N C+ G + N +R + G LRNCN
Sbjct: 917 RTILDNASVINGTFHDPSRILPRCSFEGASCRGCDFEDSNFEDANMRVASFKGASLRNCN 976
Query: 218 TGGLGLRNCNTGGLGLRNCNTGG 240
LR+CN G L C+ G
Sbjct: 977 -----LRSCNLAGSDLSECDLSG 994
>gi|307086112|ref|ZP_07495225.1| hypothetical protein TMLG_03990, partial [Mycobacterium
tuberculosis SUMu012]
gi|308364417|gb|EFP53268.1| hypothetical protein TMLG_03990 [Mycobacterium tuberculosis
SUMu012]
Length = 1360
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 38 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 97
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 98 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 157
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 158 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 195
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 38 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 97
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 173
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 98 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 157
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTGG + NTG L + NTG + NTG
Sbjct: 158 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 195
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 38 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 97
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 98 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 157
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 158 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 195
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 41 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 100
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 101 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 160
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 161 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 195
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1223 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1282
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1283 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1342
Query: 164 RNCNTGGLGLRNCNTGGL 181
NTGG + NTG L
Sbjct: 1343 GQANTGGFNPGSVNTGWL 1360
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1223 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1282
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 193
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1283 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1342
Query: 194 RNCNTGGLGLRNCNTGGL 211
NTGG + NTG L
Sbjct: 1343 GQANTGGFNPGSVNTGWL 1360
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1223 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1282
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1283 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1342
Query: 204 RNCNTGGLGLRNCNTGGL 221
NTGG + NTG L
Sbjct: 1343 GQANTGGFNPGSVNTGWL 1360
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1223 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1282
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 213
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1283 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1342
Query: 214 RNCNTGGLGLRNCNTGGL 231
NTGG + NTG L
Sbjct: 1343 GQANTGGFNPGSVNTGWL 1360
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 166
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1223 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1282
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 223
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1283 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1342
Query: 224 RNCNTGGLGLRNCNTGGL 241
NTGG + NTG L
Sbjct: 1343 GQANTGGFNPGSVNTGWL 1360
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1226 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1285
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1286 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1345
Query: 127 NTGGLGLRNCNTGGL 141
NTGG + NTG L
Sbjct: 1346 NTGGFNPGSVNTGWL 1360
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 24 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 83
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 84 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 143
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 144 VVNAGSYNTGSFNAGEANTGGF 165
>gi|306786224|ref|ZP_07424546.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308329164|gb|EFP18015.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 1558
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 368
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 369 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 371
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 372 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 134 RNCNT 138
NT
Sbjct: 1554 GQANT 1558
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 144 RNCNT 148
NT
Sbjct: 1554 GQANT 1558
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 96
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 153
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 154 RNCNT 158
NT
Sbjct: 1554 GQANT 1558
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 164 RNCNT 168
NT
Sbjct: 1554 GQANT 1558
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 193
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 194 RNCNT 198
NT
Sbjct: 1554 GQANT 1558
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 204 RNCNT 208
NT
Sbjct: 1554 GQANT 1558
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 213
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 214 RNCNT 218
NT
Sbjct: 1554 GQANT 1558
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1434 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1493
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 233
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1494 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1553
Query: 234 RNCNT 238
NT
Sbjct: 1554 GQANT 1558
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 235 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 294
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 295 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 354
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 355 VVNAGSYNTGSFNAGEANTGGF 376
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1437 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1496
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1497 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1556
Query: 127 NT 128
NT
Sbjct: 1557 NT 1558
>gi|306786222|ref|ZP_07424544.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308329180|gb|EFP18031.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 501
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 86/203 (42%), Gaps = 10/203 (4%)
Query: 71 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
GL N G +G N +G G+GL N G G N +G +GL N TG +G N T
Sbjct: 5 FGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGT 64
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G G+ N + G+ N GL N NTG + + NTG NTGG +
Sbjct: 65 GNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGS 124
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
NTG L + NTG + NTG N + G R G LG +T I+P+
Sbjct: 125 VNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYTST---IIPE 180
Query: 246 SKRGAQENASRSENEPCLVKIKF 268
A +AS + I+F
Sbjct: 181 FTV-ANIHASGGAGPIIVPSIQF 202
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
GL N G +G N +G G+GL N G G N +G +GL N TG +G N T
Sbjct: 5 FGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGT 64
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
G G+ N + G+ N GL N NTG + + NTG NTGG +
Sbjct: 65 GNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGS 124
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT--GGLGL 233
NTG L + NTG + NTG N + G R G LG +T +
Sbjct: 125 VNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYTSTIIPEFTV 183
Query: 234 RNCNTGG----LIVPKSKRGA 250
N + G +IVP + A
Sbjct: 184 ANIHASGGAGPIIVPSIQFPA 204
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
GL N G +G N +G G+GL N G G N +G +GL N TG +G N T
Sbjct: 5 FGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGT 64
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
G G+ N + G+ N GL N NTG + + NTG NTGG +
Sbjct: 65 GNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGS 124
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 188
NTG L + NTG + NTG N + G R G LG +T
Sbjct: 125 VNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYTST 176
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 31 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
GL N G +G N +G G+GL N G G N +G +GL N TG +G N T
Sbjct: 5 FGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGT 64
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
G G+ N + G+ N GL N NTG + + NTG NTGG +
Sbjct: 65 GNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGS 124
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
NTG L + NTG + NTG N + G R G LG +T
Sbjct: 125 VNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYTST 176
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 74/173 (42%), Gaps = 6/173 (3%)
Query: 41 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
GL N G +G N +G G+GL N G G N +G +GL N TG +G N T
Sbjct: 5 FGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGT 64
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
G G+ N + G+ N GL N NTG + + NTG NTGG +
Sbjct: 65 GNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGS 124
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
NTG L + NTG + NTG N + G R G LG +T
Sbjct: 125 VNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYTST 176
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 74/172 (43%), Gaps = 6/172 (3%)
Query: 12 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N +G G+GL N G G N +G +GL N TG +G N TG
Sbjct: 6 GLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTG 65
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G+ N + G+ N GL N NTG + + NTG NTGG +
Sbjct: 66 NWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSV 125
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
NTG L + NTG + NTG N + G R G LG +T
Sbjct: 126 NTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYTST 176
>gi|428315035|ref|YP_007119052.1| pentapeptide repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428245070|gb|AFZ10853.1| pentapeptide repeat protein [Oscillatoria nigro-viridis PCC 7112]
Length = 272
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 86/247 (34%), Gaps = 17/247 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+ + LR G + G+ L + + L N N L N N L N N
Sbjct: 3 AEELLRRYAAGERDFAGVDLSGVDLNKAHLIDIDLSNAN-----LINANFSYADLINANF 57
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
G L N N + L + N L + N GG L N N G LR GG L N
Sbjct: 58 SGANLSNANLNCIDLSDANLNNANLSDANLGGAQLINANLSGANLREAFFGGADLSKANL 117
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
L+N N L + N G L+N C G+ N N G L N + G
Sbjct: 118 SSACLQNANLDSADLTDANLSGANLKNGCLC---GIHCENTNLNGADLSNSDITEAGFYE 174
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
G L N G N + G N G + + G L + N G + P+
Sbjct: 175 ATLIGTNLSNTMLHQTGFENSDLTG-----ANFSGAIMDETSFDGSNLSHANLMG-VQPE 228
Query: 246 SKRGAQE 252
A++
Sbjct: 229 PSLMAKK 235
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 70/201 (34%), Gaps = 11/201 (5%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I +S L N N L N N G L N N + L + N L + N GG L
Sbjct: 33 IDIDLSNANLINANFSYADLINANFSGANLSNANLNCIDLSDANLNNANLSDANLGGAQL 92
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGG 120
N N G LR GG L N L+N N L + N G L+N C G
Sbjct: 93 INANLSGANLREAFFGGADLSKANLSSACLQNANLDSADLTDANLSGANLKNGCLC---G 149
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+ N N G L N + G G L N G N + G N G
Sbjct: 150 IHCENTNLNGADLSNSDITEAGFYEATLIGTNLSNTMLHQTGFENSDLTG-----ANFSG 204
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ + G L + N G+
Sbjct: 205 AIMDETSFDGSNLSHANLMGV 225
>gi|7509618|pir||T26670 hypothetical protein Y38E10A.t - Caenorhabditis elegans
Length = 460
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 90/236 (38%), Gaps = 17/236 (7%)
Query: 8 ISTKGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
I+T GL + +GL T GL ++ T GL + T GL + T GL
Sbjct: 38 ITTMGLTTMSLTTMGLTTMGLTTMGLTTKDLTTMGLTTKGLTTMGLTTKGLTTMGL---- 93
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL ++ T GL T GL ++ T GL T GL + T GL
Sbjct: 94 -TTMGLTTKDLTTMGLTTMGLTTMGLTTKDLTTMGL-----TTMGLTTMSLTTMGLTTMG 147
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL T GL T GL ++ T GL T GL +
Sbjct: 148 LTTMGLTTMDLTTKGLTTMGLTTKGLTTMGLTTMGLTTKSLTTMGL-----TTMGLTTKG 202
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL T GL T GL T GL + T GL
Sbjct: 203 LTTKGLTTMSLTTMGLTTMGLTTKGLTTMGLTTKGLTTMGITTMGLTTKGLTTMGL 258
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 90/236 (38%), Gaps = 22/236 (9%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL T GL NT GL T G T GL + T GL
Sbjct: 3 LTTKGLTTMGLTTMGLTTMGLNTTGLTTMRLTTMG-----ITTMGLTTMSLTTMGLTTMG 57
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL ++ T GL + T GL + T GL T GL ++ T GL
Sbjct: 58 LTTMGLTTKDLTTMGLTTKGLTTMGLTTKGLTTMGL-----TTMGLTTKDLTTMGLTTMG 112
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL ++ T GL T GL + T GL T GL + T GL
Sbjct: 113 LTTMGLTTKDLTTMGL-----TTMGLTTMSLTTMGLTTMGLTTMGLTTMDLTTKGLTTMG 167
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL T GL ++ T GL T GL + T GL + T GL
Sbjct: 168 LTTKGLTTMGLTTMGLTTKSLTTMGL-----TTMGLTTKGLTTKGLTTMSLTTMGL 218
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 88/236 (37%), Gaps = 12/236 (5%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL T GL T GL ++ T GL T GL ++ T GL
Sbjct: 73 LTTKGLTTMGLTTKGLTTMGLTTMGLTTKDLTTMGLTTMGLTTMGLTTKDLTTMGL---- 128
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL T GL + T GL T GL T GL ++
Sbjct: 129 -TTMGLTTMSLTTMGLTTMGLTTMGLTTMDLTTKGLTTMGLTTKGLTTMGLTTMGLTTKS 187
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL T GL + T GL + T GL T GL T GL
Sbjct: 188 LTTMGL-----TTMGLTTKGLTTKGLTTMSLTTMGLTTMGLTTKGLTTMGLTTKGLTTMG 242
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL GL + T GL + T GL + T GL
Sbjct: 243 ITTMGLTTKGLTTMGLTTMGLTPMGLTTKGLTTKGLTTKGLTTMGLSTKGLTTMGL 298
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 88/234 (37%), Gaps = 18/234 (7%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++T GL NT GL T G T GL + T GL T GL ++
Sbjct: 18 LTTMGL---NTTGLTTMRLTTMG-----ITTMGLTTMSLTTMGLTTMGLTTMGLTTKDLT 69
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T GL + T GL + T GL T GL ++ T GL T GL ++
Sbjct: 70 TMGLTTKGLTTMGLTTKGLTTMGL-----TTMGLTTKDLTTMGLTTMGLTTMGLTTKDLT 124
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL T GL + T GL T GL + T GL T GL
Sbjct: 125 TMGL-----TTMGLTTMSLTTMGLTTMGLTTMGLTTMDLTTKGLTTMGLTTKGLTTMGLT 179
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL ++ T GL T GL + T L T GL + T GL
Sbjct: 180 TMGLTTKSLTTMGLTTMGLTTKGLTTKGLTTMSLTTMGLTTMGLTTKGLTTMGL 233
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 94/271 (34%), Gaps = 15/271 (5%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TK L T GL + T GL T GL + T GL T GL
Sbjct: 118 LTTKDLTTMGLTTMGLTTMSLTTMGLTTMGLTTMGLTTMDLTTKGLTTMGLTTKGLTTMG 177
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL ++ T GL T GL + T L T GL + T GL +
Sbjct: 178 LTTMGLTTKSLTTMGLTTMGLTTKGLTTKGLTTMSLTTMGLTTMGLTTKGLTTMGLTTKG 237
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T G+ T GL T GL T GL + T GL +T GL
Sbjct: 238 LTTMGITTMGLTTKGLTTMGLTTMGLTPMGLTTKGLTTKGLTTKGLTTMGLSTKGLTTMG 297
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
GL + T GL + T GL T GL +T L LRN PK
Sbjct: 298 LTPMGLTTKGLTTMGLSTKGLTTMGLTTMGLTTKGLTTMGLDTKVLFLRNFK----FQPK 353
Query: 246 SKRGAQENASRS--------ENEP-CLVKIK 267
+ + SR E P KIK
Sbjct: 354 YFQKIKILNSRQNMFKKLNFEFPPKYFQKIK 384
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 86/232 (37%), Gaps = 13/232 (5%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
T GL +G T GL + T GL T GL ++ T GL + T
Sbjct: 25 TTGLTTMRLTTMG---ITTMGLTTMSLTTMGLTTMGLTTMGLTTKDLTTMGLTTKGLTTM 81
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL + T GL T GL ++ T GL T GL ++ T GL T
Sbjct: 82 GLTTKGLTTMGL-----TTMGLTTKDLTTMGLTTMGLTTMGLTTKDLTTMGL-----TTM 131
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
GL + T GL T GL + T GL T GL T GL ++ T
Sbjct: 132 GLTTMSLTTMGLTTMGLTTMGLTTMDLTTKGLTTMGLTTKGLTTMGLTTMGLTTKSLTTM 191
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
GL T GL + T L T GL + T GL + T G+
Sbjct: 192 GLTTMGLTTKGLTTKGLTTMSLTTMGLTTMGLTTKGLTTMGLTTKGLTTMGI 243
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 86/236 (36%), Gaps = 7/236 (2%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TK L T GL T GL T GL ++ T GL T GL ++
Sbjct: 63 LTTKDLTTMGLTTKGLTTMGLTTKGLTTMGLTTMGLTTKDLTTMGLTTMGLTTMGLTTKD 122
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL T GL + T GL T GL + T GL T GL
Sbjct: 123 LTTMGL-----TTMGLTTMSLTTMGLTTMGLTTMGLTTMDLTTKGLTTMGLTTKGLTTMG 177
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL ++ T GL T GL + T L T GL + T GL +
Sbjct: 178 LTTMGLTTKSLTTMGLTTMGLTTKGLTTKGLTTMSLTTMGLTTMGLTTKGLTTMGLTTKG 237
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T G+ T GL T GL T GL + T GL +T GL
Sbjct: 238 LTTMGITTMGLTTKGLTTMGLTTMGLTPMGLTTKGLTTKGLTTKGLTTMGLSTKGL 293
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 87/234 (37%), Gaps = 13/234 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++T GL T GL ++ T GL T GL ++ T GL T GL +
Sbjct: 88 LTTMGL---TTMGLTTKDLTTMGLTTMGLTTMGLTTKDLTTMGL-----TTMGLTTMSLT 139
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T GL T GL + T GL T GL T GL ++ T GL
Sbjct: 140 TMGLTTMGLTTMGLTTMDLTTKGLTTMGLTTKGLTTMGLTTMGLTTKSLTTMGL-----T 194
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL + T GL + T GL T GL T GL T GL +
Sbjct: 195 TMGLTTKGLTTKGLTTMSLTTMGLTTMGLTTKGLTTMGLTTKGLTTMGITTMGLTTKGLT 254
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL GL + T GL + T GL + T GL T GL
Sbjct: 255 TMGLTTMGLTPMGLTTKGLTTKGLTTKGLTTMGLSTKGLTTMGLTPMGLTTKGL 308
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 88/236 (37%), Gaps = 12/236 (5%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++T GL ++ T GL T GL ++ T GL T GL + T GL
Sbjct: 93 LTTMGLTTKDLTTMGLTTMGLTTMGLTTKDLTTMGL-----TTMGLTTMSLTTMGLTTMG 147
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL T GL T GL ++ T GL T GL +
Sbjct: 148 LTTMGLTTMDLTTKGLTTMGLTTKGLTTMGLTTMGLTTKSLTTMGL-----TTMGLTTKG 202
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL T GL T GL T GL + T GL
Sbjct: 203 LTTKGLTTMSLTTMGLTTMGLTTKGLTTMGLTTKGLTTMGITTMGLTTKGLTTMGLTTMG 262
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
GL + T GL + T GL + T GL T GL +T GL
Sbjct: 263 LTPMGLTTKGLTTKGLTTKGLTTMGLSTKGLTTMGLTPMGLTTKGLTTMGLSTKGL 318
>gi|385996227|ref|YP_005914525.1| putative PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339296181|gb|AEJ48292.1| putative PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 845
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 441
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 441
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N T G+GL + G+G N TG +GL N T
Sbjct: 274 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 333
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 334 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 393
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 394 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 441
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N T G+GL + G+G N TG +GL N TG
Sbjct: 275 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 334
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 335 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 394
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 395 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 441
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 206 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 265
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N N G+GL + G+G N TG
Sbjct: 266 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 325
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 326 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 385
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 386 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 430
>gi|378582929|ref|ZP_09831540.1| hypothetical protein CKS_5479 [Pantoea stewartii subsp. stewartii
DC283]
gi|377814439|gb|EHT97579.1| hypothetical protein CKS_5479 [Pantoea stewartii subsp. stewartii
DC283]
Length = 375
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 67/215 (31%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G+ L + + G L + N L + N L N L L N
Sbjct: 147 INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSN 206
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N G L N N L N N G L + N L + L N + L N
Sbjct: 207 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSN 266
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
N G L N N L N N G L + N L + L N + L +
Sbjct: 267 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSD 326
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N L N + L N G L + N G
Sbjct: 327 ANLSDANLTNVDLKRADLSNAILKGANLLHINVEG 361
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 67/215 (31%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N G+ L + + G L + N L + N L N L L N
Sbjct: 147 INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSN 206
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
N G L N N L N N G L + N L + L N + L N
Sbjct: 207 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSN 266
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
N G L N N L N N G L + N L + L N + L +
Sbjct: 267 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSD 326
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
N L N + L N G L + N G
Sbjct: 327 ANLSDANLTNVDLKRADLSNAILKGANLLHINVEG 361
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 64/208 (30%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
L + + G L + N L + N L N L L N N G
Sbjct: 154 LSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSNANLSGAD 213
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N N L N N G L + N L + L N + L N N G
Sbjct: 214 LTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSNANLSGAD 273
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
L N N L N N G L + N L + L N + L + N
Sbjct: 274 LTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSDANLSDAN 333
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 220
L N + L N G L + N G
Sbjct: 334 LTNVDLKRADLSNAILKGANLLHINVEG 361
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 64/200 (32%), Gaps = 5/200 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNT-----GGLGLRNCNTGGLGLRNCNTGG 60
A +S L + + L + N G L + N L N N G L N N
Sbjct: 162 AYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSNANLSGADLTNANLNQ 221
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
L N N G L + N L + L N + L N N G L N N
Sbjct: 222 TDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSNANLSGADLTNANLNQ 281
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L N N G L + N L + L N + L + N L N +
Sbjct: 282 TDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSDANLSDANLTNVDLKR 341
Query: 181 LGLRNCNTGGLGLRNCNTGG 200
L N G L + N G
Sbjct: 342 ADLSNAILKGANLLHINVEG 361
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 55/166 (33%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 64
+A +S L N N G L N N L N N G L + N L + L
Sbjct: 196 MAYLSEADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLS 255
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
N + L N N G L N N L N N G L + N L + L
Sbjct: 256 NADLKRADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLS 315
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
N + L + N L N + L N G L + N G
Sbjct: 316 NADLKRADLSDANLSDANLTNVDLKRADLSNAILKGANLLHINVEG 361
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 44/139 (31%)
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
N G+ L + + G L + N L + N L N L L N
Sbjct: 147 INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSN 206
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
N G L N N L N N G L + N L + L N + L N
Sbjct: 207 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSN 266
Query: 226 CNTGGLGLRNCNTGGLIVP 244
N G L N N +P
Sbjct: 267 ANLSGADLTNANLNQTDLP 285
>gi|308372509|ref|ZP_07428913.2| hypothetical protein TMDG_03995, partial [Mycobacterium
tuberculosis SUMu004]
gi|308332998|gb|EFP21849.1| hypothetical protein TMDG_03995 [Mycobacterium tuberculosis
SUMu004]
Length = 310
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 149 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 208
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 205
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 209 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 268
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 269 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 305
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 149 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 208
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 209 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 268
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 269 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 304
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 150 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 209
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 210 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 269
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 270 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 304
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 121 LGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGL 173
+GL N G GL N G +G N +G G+GL N G G N +G +GL
Sbjct: 144 MGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGL 203
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 230
N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 204 FNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGS 263
Query: 231 LGLRNCNTGGL 241
NTGG
Sbjct: 264 FNAGQANTGGF 274
>gi|433633366|ref|YP_007266993.1| Conserved protein of unknown function, PPE family (fragment)
[Mycobacterium canettii CIPT 140070017]
gi|432164959|emb|CCK62426.1| Conserved protein of unknown function, PPE family (fragment)
[Mycobacterium canettii CIPT 140070017]
Length = 1079
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 108/268 (40%), Gaps = 28/268 (10%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL N + +G N +G +G N +G G N G G RN GL N +G +
Sbjct: 210 GLANVGSANVGSFNLGSGNVGNFNIGSGNHGDFNIGFGNSGSRN-----FGLGNVGSGNV 264
Query: 72 GLRNCNTGG------LGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLG 122
G N G +G N +G+ N G N NTG +GL G G
Sbjct: 265 GFGNSGPGFTVGNDNIGFGNTGNSNVGVANAGIANRGFANSGNVNTG-IGLTGAGQVGFG 323
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG 179
N TG LGL N TG +G N TG G+ N + G N + G N NTG
Sbjct: 324 GLNSGTGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSHNTGFFNAGSTNTGFVNSGLANTG 383
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+ N+G L + N NTG N NTG L N NTG NTG L N+G
Sbjct: 384 IANTGDYNSGNLNVGNLNTGSYNPGNVNTGYLNPGNTNTGA-----ANTGDLDTGAFNSG 438
Query: 240 ----GLIVPKSKRGAQENASRSENEPCL 263
G + +G Q AS + P +
Sbjct: 439 NRNNGFFWSRDNQG-QIGASYTITIPEI 465
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 94/229 (41%), Gaps = 18/229 (7%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N +GL N + +G N +G +G N +G G N G G RN G
Sbjct: 201 LVNAGLANVGLANVGSANVGSFNLGSGNVGNFNIGSGNHGDFNIGFGNSGSRN-----FG 255
Query: 83 LRNCNTGGLGLRNCNTGG------LGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGL 133
L N +G +G N G +G N +G+ N G N NTG +GL
Sbjct: 256 LGNVGSGNVGFGNSGPGFTVGNDNIGFGNTGNSNVGVANAGIANRGFANSGNVNTG-IGL 314
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
G G N TG LGL N TG +G N TG G+ N + G N + G
Sbjct: 315 TGAGQVGFGGLNSGTGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSHNTGFFNAGSTNTGF 374
Query: 194 RN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + N+G L + N NTG N NTG L N NTG
Sbjct: 375 VNSGLANTGIANTGDYNSGNLNVGNLNTGSYNPGNVNTGYLNPGNTNTG 423
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 93/222 (41%), Gaps = 13/222 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
IS L N GGL + N N LG N +G G N +G G N +G G N
Sbjct: 660 ISAFSLGFANYGGLNVGNAN---LGDFNLGSGNHGSFNIGSGNHGSFNIGSGNSGSYNIG 716
Query: 68 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLG 122
G LG N G G G N G +G N T GL N NTG + + G+G
Sbjct: 717 FGNLGSANIGFGNTGPGFTAGN-GNIGFGNTGTANWGLANTGDYNTG-IAITGEYQIGIG 774
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 179
N TG +GL N T +G N G +G+ N NTG + NTG + NTG
Sbjct: 775 GVNSGTGNIGLFNSGTANIGFFNSGDGNIGIGNAGSTNTGIFNVGGVNTGVGNTGSYNTG 834
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ N NTG N NTG N NTG + NTG
Sbjct: 835 IFNVGNTNTGAYNPGNVNTGAFNPGNANTGVANTGDINTGAF 876
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 91/215 (42%), Gaps = 13/215 (6%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 95
N GGL + N N LG N +G G N +G G N +G G N G LG N
Sbjct: 668 ANYGGLNVGNAN---LGDFNLGSGNHGSFNIGSGNHGSFNIGSGNSGSYNIGFGNLGSAN 724
Query: 96 CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGG 150
G G G N G +G N T GL N NTG + + G+G N TG
Sbjct: 725 IGFGNTGPGFTAGN-GNIGFGNTGTANWGLANTGDYNTG-IAITGEYQIGIGGVNSGTGN 782
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
+GL N T +G N G +G+ N NTG + NTG + NTG + N N
Sbjct: 783 IGLFNSGTANIGFFNSGDGNIGIGNAGSTNTGIFNVGGVNTGVGNTGSYNTGIFNVGNTN 842
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG N NTG N NTG + NTG I
Sbjct: 843 TGAYNPGNVNTGAFNPGNANTGVANTGDINTGAFI 877
>gi|440581388|emb|CCG11791.1| PPE FAMILY protein PPE34 [Mycobacterium tuberculosis 7199-99]
Length = 1666
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 808 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 859
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 860 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 919
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 920 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 979
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 980 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1037
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 875 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 934
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 935 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 994
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 995 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1036
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 762 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 819
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 820 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 871
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 872 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 926
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 927 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 984
>gi|308373710|ref|ZP_07667634.1| hypothetical protein TMEG_04013, partial [Mycobacterium
tuberculosis SUMu005]
gi|308336619|gb|EFP25470.1| hypothetical protein TMEG_04013 [Mycobacterium tuberculosis
SUMu005]
Length = 276
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 113 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 172
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 205
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 173 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 232
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 233 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 269
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 113 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 172
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 173 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 232
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 233 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 268
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 113 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 172
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 165
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 173 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 232
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 233 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 268
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 113 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 172
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 185
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 173 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 232
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 233 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 268
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 1 MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 58
+ P + + G N + GL N G +G N +G G+GL N G G N +
Sbjct: 103 LTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGS 162
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 115
G +GL N TG +G N TG G+ N + G+ N GL N NTG + +
Sbjct: 163 GNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGS 222
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTG NTGG + NTG L + NTG + NTG
Sbjct: 223 YNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 268
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 121 LGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGL 173
+GL N G GL N G +G N +G G+GL N G G N +G +GL
Sbjct: 108 MGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGL 167
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 230
N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 168 FNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGS 227
Query: 231 LGLRNCNTGGL 241
NTGG
Sbjct: 228 FNAGQANTGGF 238
>gi|306790592|ref|ZP_07428914.1| hypothetical protein TMDG_03996, partial [Mycobacterium
tuberculosis SUMu004]
gi|308332997|gb|EFP21848.1| hypothetical protein TMDG_03996 [Mycobacterium tuberculosis
SUMu004]
Length = 1283
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 61
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 62 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 121
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 122 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 159
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 61
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 62 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 121
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 122 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 159
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 96
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 61
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 153
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 62 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 121
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTGG + NTG L + NTG + NTG
Sbjct: 122 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 159
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 61
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 62 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 121
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 122 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 159
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 61
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 173
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 62 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 121
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTGG + NTG L + NTG + NTG
Sbjct: 122 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 159
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 61
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 62 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 121
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 122 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 159
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 5 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 64
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 65 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 124
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 125 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 159
>gi|289750499|ref|ZP_06509877.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289691086|gb|EFD58515.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 1660
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 940 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 991
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 992 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1051
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1052 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1111
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1112 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1169
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 392
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 393 GNTGNVNTGGF 403
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1007 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1066
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1067 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1126
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1127 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1168
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 894 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 951
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 952 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 1003
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 1004 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 1058
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1059 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1116
>gi|427738985|ref|YP_007058529.1| putative low-complexity protein [Rivularia sp. PCC 7116]
gi|427374026|gb|AFY57982.1| putative low-complexity protein [Rivularia sp. PCC 7116]
Length = 540
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 73/205 (35%), Gaps = 15/205 (7%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
LR + G L N L LR+ N L + L N N
Sbjct: 44 LRKVDLGSSDLSYANLSYAQLNRAELYRANLRSTNLSHADLSYADLSQADLSNAN----- 98
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
L N + L + G+ L N G L + N G+ L + G+ LR N G
Sbjct: 99 LSNADLSYADLSDTKLTGINLSNTKLRGTRLDDVNLYGVNLSGADLSGVNLRYVNLNGAI 158
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
L N L+N + G L+N + G LRN N L+N N L N N G
Sbjct: 159 LNRVNLKYANLKNFDFKGTSLQNADLSGANLRNANFRNAKLQNAN-----LSNTNLDGAN 213
Query: 213 LRNCNTGGLGLRNCNTGGLGLRNCN 237
LR G+ L G LRN +
Sbjct: 214 LRYAELIGVRL-----NGASLRNAD 233
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 75/213 (35%), Gaps = 15/213 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A + K LR + G L N L LR+ N L + L N
Sbjct: 37 ADFNRKNLRKVDLGSSDLSYANLSYAQLNRAELYRANLRSTNLSHADLSYADLSQADLSN 96
Query: 66 CNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
N L + G+ L N G L + N G+ L + G+ LR N G
Sbjct: 97 ANLSNADLSYADLSDTKLTGINLSNTKLRGTRLDDVNLYGVNLSGADLSGVNLRYVNLNG 156
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L N L+N + G L+N + G LRN N L+N N L N N G
Sbjct: 157 AILNRVNLKYANLKNFDFKGTSLQNADLSGANLRNANFRNAKLQNAN-----LSNTNLDG 211
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
LR G+ L G LRN + G L
Sbjct: 212 ANLRYAELIGVRL-----NGASLRNADLRGANL 239
>gi|306973797|ref|ZP_07486458.1| hypothetical protein TMJG_03530, partial [Mycobacterium
tuberculosis SUMu010]
gi|308356854|gb|EFP45705.1| hypothetical protein TMJG_03530 [Mycobacterium tuberculosis
SUMu010]
Length = 1307
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 66 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 125
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 126 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 185
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 186 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 223
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 66 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 125
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 173
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 126 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 185
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTGG + NTG L + NTG + NTG
Sbjct: 186 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 223
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 66 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 125
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 126 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 185
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 186 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 223
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 69 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 128
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 129 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 188
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 189 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 223
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 52 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 111
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 112 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 171
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 172 VVNAGSYNTGSFNAGEANTGGF 193
>gi|289752044|ref|ZP_06511422.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289692631|gb|EFD60060.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 619
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 111 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 170
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 171 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 230
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 231 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 289
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 290 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 322
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 111 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 170
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 171 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 230
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNCN 237
NTGG + NTG L + NTG + NTG N + G GL +
Sbjct: 231 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAFWRGDYQGLLGFS 290
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
I+P+ A +AS + I+F
Sbjct: 291 YTSTIIPEFTV-ANIHASGGAGPIIVPSIQF 320
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 111 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 170
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 171 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 230
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 231 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 289
Query: 194 RNCNT 198
+T
Sbjct: 290 SYTST 294
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 111 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 170
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 171 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 230
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 231 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 289
Query: 204 RNCNT 208
+T
Sbjct: 290 SYTST 294
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 114 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 173
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 174 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 233
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 234 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 292
Query: 187 NT 188
+T
Sbjct: 293 ST 294
>gi|289571575|ref|ZP_06451802.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289545329|gb|EFD48977.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 2045
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1537 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1596
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1597 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1656
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1657 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1715
Query: 224 RNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+T + N + G +IVP + A
Sbjct: 1716 SYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 1748
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 961 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1020
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1021 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1080
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1081 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1119
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1537 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1596
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1597 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1656
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1657 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1715
Query: 194 RNCNT 198
+T
Sbjct: 1716 SYTST 1720
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1537 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1596
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1597 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1656
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1657 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 1715
Query: 204 RNCNT 208
+T
Sbjct: 1716 SYTST 1720
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 961 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1020
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1021 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1080
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1081 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1118
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 961 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1020
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1021 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1080
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 1081 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1118
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 961 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1020
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1021 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1080
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1081 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1118
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 961 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1020
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1021 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1080
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 1081 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1118
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 961 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1020
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 193
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1021 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1080
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTGG + NTG L + NTG + NTG
Sbjct: 1081 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1118
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1537 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1596
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1597 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1656
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNCN 237
NTGG + NTG L + NTG + NTG N + G GL +
Sbjct: 1657 GQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAFWRGDYQGLLGFS 1716
Query: 238 TGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
I+P+ A +AS + I+F
Sbjct: 1717 YTSTIIPEFTV-ANIHASGGAGPIIVPSIQF 1746
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1540 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1599
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1600 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1659
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 1660 NTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 1718
Query: 187 NT 188
+T
Sbjct: 1719 ST 1720
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 964 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1023
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1024 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1083
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1084 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1118
>gi|449063984|ref|YP_007431067.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|449032492|gb|AGE67919.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1665
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G +G G G N + G N
Sbjct: 880 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGN 931
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 932 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 991
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 992 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1051
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1052 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1109
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 947 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1006
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1007 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1066
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1067 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1108
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 97/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 834 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 891
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G +G G G N + G N + LG N
Sbjct: 892 ---LGDYNVGSGNVGSYNFGSGNIG-----NGSFGFGNIGSNNFGFGNVGSNNLGFANTG 943
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 944 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 998
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 999 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1056
>gi|385991283|ref|YP_005909581.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|339298476|gb|AEJ50586.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length = 1707
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 987 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 1038
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 1039 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1098
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1099 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1158
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1159 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1216
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 392
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 393 GNTGNVNTGGF 403
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1054 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1113
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1114 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1173
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1174 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1215
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 941 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 998
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 999 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 1050
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 1051 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 1105
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1106 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1163
>gi|289574600|ref|ZP_06454827.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289539031|gb|EFD43609.1| PPE family protein [Mycobacterium tuberculosis K85]
Length = 1751
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 966 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 1017
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 1018 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1077
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1078 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1137
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1138 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1195
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 392
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 393 GNTGNVNTGGF 403
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1033 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1092
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1093 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1152
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1153 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1194
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 920 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 977
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 978 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 1029
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 1030 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 1084
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1085 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1142
>gi|307081507|ref|ZP_07490677.1| hypothetical protein TMKG_04094, partial [Mycobacterium
tuberculosis SUMu011]
gi|308360806|gb|EFP49657.1| hypothetical protein TMKG_04094 [Mycobacterium tuberculosis
SUMu011]
Length = 322
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 164 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 223
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 205
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 224 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 283
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 284 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 320
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 164 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 223
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 224 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQ 283
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 284 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 319
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 72/166 (43%), Gaps = 5/166 (3%)
Query: 1 MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 58
+ P + + G N + GL N G +G N +G G+GL N G G N +
Sbjct: 154 LTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGS 213
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 115
G +GL N TG +G N TG G+ N + G+ N GL N NTG + +
Sbjct: 214 GNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGS 273
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTG NTGG + NTG L + NTG + NTG
Sbjct: 274 YNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 319
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 57/131 (43%), Gaps = 10/131 (7%)
Query: 121 LGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGL 173
+GL N G GL N G +G N +G G+GL N G G N +G +GL
Sbjct: 159 MGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGL 218
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 230
N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 219 FNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGS 278
Query: 231 LGLRNCNTGGL 241
NTGG
Sbjct: 279 FNAGQANTGGF 289
>gi|300866933|ref|ZP_07111605.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300335037|emb|CBN56767.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 253
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 49/121 (40%)
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
C+ LRN N G LRN N G LR L N + G LR+ + LRN
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLRGAALRNADLSNADLRGADLRDADLSRSNLRN 101
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVK 265
N LRN + +R N G LR N +P RG + R++NE V+
Sbjct: 102 ANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGLPGDNRGRDNDRERNDNERVAVE 161
Query: 266 I 266
Sbjct: 162 F 162
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 61/154 (39%), Gaps = 20/154 (12%)
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
C+ LRN N G LRN N G LR G LRN + L N + G LR+
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRD 91
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
+ LRN N LRN + +R N G LR N GL N G R
Sbjct: 92 ADLSRSNLRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGLPGDNRGRDNDRE 151
Query: 236 CNTGGLIVPKSKRGAQENASRSENEPCLVKIKFT 269
N +R A E SRS +E V+I+
Sbjct: 152 RNDN-------ERVAVEFISRSNDE---VRIQIE 175
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C+ LRN N G LRN N G LR G LRN + L N + G LR+
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRD 91
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ LRN N LRN + +R N G LR N GL
Sbjct: 92 ADLSRSNLRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGL 139
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
C+ LRN N G LRN N G LR G LRN + L N + G LR+
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRD 91
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
+ LRN N LRN + +R N G LR N GL
Sbjct: 92 ADLSRSNLRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGL 139
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 95
C+ LRN N G LRN N G LR G LRN + L N + G LR+
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRD 91
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
+ LRN N LRN + +R N G LR N GL
Sbjct: 92 ADLSRSNLRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGL 139
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 46 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
C+ LRN N G LRN N G LR G LRN + L N + G LR+
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRD 91
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
+ LRN N LRN + +R N G LR N GL
Sbjct: 92 ADLSRSNLRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGL 139
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
C+ LRN N G LRN N G LR G LRN + L N + G LR+
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRD 91
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 163
+ LRN N LRN + +R N G LR N GL
Sbjct: 92 ADLSRSNLRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGL 139
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
C+ LRN N G LRN N G LR G LRN + L N + G LR+
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRD 91
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
+ LRN N LRN + +R N G LR N GL
Sbjct: 92 ADLSRSNLRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGL 139
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C+ LRN N G LRN N G LR G LRN + L N + G LR+
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRD 91
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ LRN N LRN + +R N G LR N GL
Sbjct: 92 ADLSRSNLRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGL 139
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
C+ LRN N G LRN N G LR G LRN + L N + G LR+
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRD 91
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
+ LRN N LRN + +R N G LR N GL
Sbjct: 92 ADLSRSNLRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGL 139
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
C+ LRN N G LRN N G LR G LRN + L N + G LR+
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRD 91
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
+ LRN N LRN + +R N G LR N GL
Sbjct: 92 ADLSRSNLRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGL 139
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
C+ LRN N G LRN N G LR G LRN + L N + G LR+
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRD 91
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
+ LRN N LRN + +R N G LR N GL
Sbjct: 92 ADLSRSNLRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGL 139
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 42/101 (41%), Gaps = 10/101 (9%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
LRN N G LRN N G LR G LRN + L N + G LR+ +
Sbjct: 49 LRNANLQGADLRNANLRGANLR-----GAALRNAD-----LSNADLRGADLRDADLSRSN 98
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
LRN N LRN + +R N G LR N GL
Sbjct: 99 LRNANLSDANLRNADLERAEVRGVNFQGTDLRGANVKDTGL 139
>gi|308374848|ref|ZP_07437615.2| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu006]
gi|308340483|gb|EFP29334.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006]
Length = 1494
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 240 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 299
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 300 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 359
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 360 VVNAGSYNTGSFNAGEANTGGF 381
>gi|308406131|ref|ZP_07669519.1| hypothetical protein TMLG_03839, partial [Mycobacterium
tuberculosis SUMu012]
gi|308364410|gb|EFP53261.1| hypothetical protein TMLG_03839 [Mycobacterium tuberculosis
SUMu012]
Length = 781
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 210 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 269
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 270 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 329
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 330 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 377
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 210 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 269
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 270 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 329
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 330 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 377
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 210 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 269
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 270 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 329
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 330 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 377
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N N G+GL + G+G N TG +GL N TG
Sbjct: 211 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 270
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 271 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 330
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 331 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 377
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 142 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 201
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N N G+GL + G+G N TG
Sbjct: 202 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 261
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 262 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 321
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 322 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 366
>gi|308378288|ref|ZP_07668710.1| hypothetical protein TMIG_03623, partial [Mycobacterium
tuberculosis SUMu009]
gi|308353008|gb|EFP41859.1| hypothetical protein TMIG_03623 [Mycobacterium tuberculosis
SUMu009]
Length = 749
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 178 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 237
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 238 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 297
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 298 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 345
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 178 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 237
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 238 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 297
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 298 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 345
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 178 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 237
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 238 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 297
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 298 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 345
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N N G+GL + G+G N TG +GL N TG
Sbjct: 179 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 238
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 239 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 298
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 299 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 345
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 110 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 169
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N N G+GL + G+G N TG
Sbjct: 170 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 229
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 230 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 289
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 290 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 334
>gi|385994751|ref|YP_005913049.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339294705|gb|AEJ46816.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 710
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|383848847|ref|XP_003700059.1| PREDICTED: uncharacterized protein LOC100881003 [Megachile rotundata]
Length = 1820
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
N LG R + G G R N G G R G G + N G R N G G R
Sbjct: 1033 NQYPLGPRGFSDGQFGPRGPNNGQFGPRGPTDGQFGPQGPNDTQFGPRGVNDGLFGPRGP 1092
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
G R N G G R NTG G R G GLR N G G R G LG +
Sbjct: 1093 TENQFGPRGPNNGPFGPRGPNTGQFGPR--FDGQFGLRRPNDGQFGPRGPIDGQLGPQ 1148
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Query: 57 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
N LG R + G G R N G G R G G + N G R N G G R
Sbjct: 1033 NQYPLGPRGFSDGQFGPRGPNNGQFGPRGPTDGQFGPQGPNDTQFGPRGVNDGLFGPRGP 1092
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
G R N G G R NTG G R G GLR N G G R G LG +
Sbjct: 1093 TENQFGPRGPNNGPFGPRGPNTGQFGPR--FDGQFGLRRPNDGQFGPRGPIDGQLGPQ 1148
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
N LG R + G G R N G G R G G + N G R N G G R
Sbjct: 1033 NQYPLGPRGFSDGQFGPRGPNNGQFGPRGPTDGQFGPQGPNDTQFGPRGVNDGLFGPRGP 1092
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
G R N G G R NTG G R G GLR N G G R G LG +
Sbjct: 1093 TENQFGPRGPNNGPFGPRGPNTGQFGPR--FDGQFGLRRPNDGQFGPRGPIDGQLGPQ 1148
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
N LG R + G G R N G G R G G + N G R N G G R
Sbjct: 1033 NQYPLGPRGFSDGQFGPRGPNNGQFGPRGPTDGQFGPQGPNDTQFGPRGVNDGLFGPRGP 1092
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G R N G G R NTG G R G GLR N G G R G LG +
Sbjct: 1093 TENQFGPRGPNNGPFGPRGPNTGQFGPRF--DGQFGLRRPNDGQFGPRGPIDGQLGPQ 1148
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
N LG R + G G R N G G R G G + N G R N G G R
Sbjct: 1033 NQYPLGPRGFSDGQFGPRGPNNGQFGPRGPTDGQFGPQGPNDTQFGPRGVNDGLFGPRGP 1092
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
G R N G G R NTG G R G GLR N G G R G LG +
Sbjct: 1093 TENQFGPRGPNNGPFGPRGPNTGQFGPRF--DGQFGLRRPNDGQFGPRGPIDGQLGPQ 1148
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 43/113 (38%), Gaps = 2/113 (1%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G R + G G R N G G R G G + N G R N G G R
Sbjct: 1038 GPRGFSDGQFGPRGPNNGQFGPRGPTDGQFGPQGPNDTQFGPRGVNDGLFGPRGPTENQF 1097
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
G R N G G R NTG G R G GLR N G G R G LG +
Sbjct: 1098 GPRGPNNGPFGPRGPNTGQFGPR--FDGQFGLRRPNDGQFGPRGPIDGQLGPQ 1148
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 39/105 (37%), Gaps = 2/105 (1%)
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
N LG R + G G R N G G R G G + N G R N G G R
Sbjct: 1033 NQYPLGPRGFSDGQFGPRGPNNGQFGPRGPTDGQFGPQGPNDTQFGPRGVNDGLFGPRGP 1092
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G R N G G R NTG G R G GLR N G
Sbjct: 1093 TENQFGPRGPNNGPFGPRGPNTGQFGPR--FDGQFGLRRPNDGQF 1135
>gi|260806054|ref|XP_002597900.1| hypothetical protein BRAFLDRAFT_97887 [Branchiostoma floridae]
gi|229283169|gb|EEN53912.1| hypothetical protein BRAFLDRAFT_97887 [Branchiostoma floridae]
Length = 1236
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Query: 3 PIVAPISTKGLRNCNTG------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 56
P V P + + +C+ + C + G ++N N+ RNCN+ RNC
Sbjct: 959 PFVFP-TYDPISDCHPDLNFFLCSILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNC 1017
Query: 57 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
N+ RN N+ RN N+ RN N+ RN N+ RNCN+ RN
Sbjct: 1018 NSSRHNHRNYNSSRHNQRNYNSSRHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRNY 1077
Query: 117 NTGGLGLRNCNTG 129
++ RN N+
Sbjct: 1078 SSSRHNQRNYNSS 1090
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 99
+ C + G ++N N+ RNCN+ RNCN+ RN N+ RN N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
RN N+ RN N+ RNCN+ RN ++ RN N+
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRNYSSSRHNQRNYNSS 1090
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
+ C + G ++N N+ RNCN+ RNCN+ RN N+ RN N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
RN N+ RN N+ RNCN+ RN ++ RN N+
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRNYSSSRHNQRNYNSS 1090
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
+ C + G ++N N+ RNCN+ RNCN+ RN N+ RN N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
RN N+ RN N+ RNCN+ RN ++ RN N+
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRNYSSSRHNQRNYNSS 1090
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
+ C + G ++N N+ RNCN+ RNCN+ RN N+ RN N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
RN N+ RN N+ RNCN+ RN ++ RN N+
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRNYSSSRHNQRNYNSS 1090
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
+ C + G ++N N+ RNCN+ RNCN+ RN N+ RN N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
RN N+ RN N+ RNCN+ RN ++ RN N+
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRNYSSSRHNQRNYNSS 1090
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
+ C + G ++N N+ RNCN+ RNCN+ RN N+ RN N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
RN N+ RN N+ RNCN+ RN ++ RN N+
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRNYSSSRHNQRNYNSS 1090
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
+ C + G ++N N+ RNCN+ RNCN+ RN N+ RN N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
RN N+ RN N+ RNCN+ RN ++ RN N+
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRNYSSSRHNQRNYNSS 1090
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
+ C + G ++N N+ RNCN+ RNCN+ RN N+ RN N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
RN N+ RN N+ RNCN+ RN ++ RN N+
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRNYSSSRHNQRNYNSS 1090
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
+ C + G ++N N+ RNCN+ RNCN+ RN N+ RN N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
RN N+ RN N+ RNCN+ RN ++ RN N+
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRNYSSSRHNQRNYNSS 1090
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%)
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
+ C + G ++N N+ RNCN+ RNCN+ RN N+ RN N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
RN N+ RN N+ RNCN+ RN ++ RN N+
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRNYSSSRHNQRNYNSS 1090
>gi|308380664|ref|ZP_07669242.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308360798|gb|EFP49649.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 793
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 222 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 281
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 195
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 282 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 341
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
NTGG NTG L N NTG N NTG N N G L V
Sbjct: 342 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 389
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 222 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 281
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 135
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 282 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 341
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 342 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 389
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+GL N + G N G +G N N G+GL + G+G N TG +GL N T
Sbjct: 222 IGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 281
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 145
G +G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 282 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGD 341
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 342 TNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 389
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N + G N G +G N N G+GL + G+G N TG +GL N TG
Sbjct: 223 GLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTG 282
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N G+ N T GL N NTG + + + NTG +
Sbjct: 283 NVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNTGSFNAGDT 342
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
NTGG NTG L N NTG N NTG N N G L +
Sbjct: 343 NTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWV 389
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 97/225 (43%), Gaps = 17/225 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG 89
N G +G N G +G+ N G +G +N N GG +G N G +G N G
Sbjct: 154 NAGLGNVGNYNVGLGNVGVFNLGAGNVGGQNLGFGNAGGTNVGFGNLGNGNVGFGNSGLG 213
Query: 90 G-------LGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGG 140
+GL N + G N G +G N N G+GL + G+G N TG
Sbjct: 214 AGLAGLGNIGLGNAGSSNYGFANLGVGNIGFGNTGTNNVGVGLTGNHLTGIGGLNSGTGN 273
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 197
+GL N TG +G N TG G+ N G+ N T GL N NTG + + + N
Sbjct: 274 IGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYN 333
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
TG + NTGG NTG L N NTG N NTG I
Sbjct: 334 TGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFI 378
>gi|289443397|ref|ZP_06433141.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289416316|gb|EFD13556.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 1810
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 929 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 980
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 981 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1040
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1041 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1100
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1101 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1158
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 996 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1055
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1056 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1115
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1116 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1157
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 883 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 940
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 941 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 992
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 993 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 1047
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1048 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1105
>gi|121637822|ref|YP_978045.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990306|ref|YP_002644993.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378771665|ref|YP_005171398.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|121493469|emb|CAL71942.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224773419|dbj|BAH26225.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601849|emb|CCC64523.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356593986|gb|AET19215.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
Length = 1835
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 1050 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 1101
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 1102 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1161
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1162 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1221
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1222 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1279
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1117 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1176
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1177 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1236
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1237 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1278
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 1004 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 1061
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 1062 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 1113
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 1114 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 1168
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1169 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1226
>gi|339631970|ref|YP_004723612.1| PPE family protein [Mycobacterium africanum GM041182]
gi|339331326|emb|CCC27010.1| PPE family protein [Mycobacterium africanum GM041182]
Length = 1838
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 1076 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 1127
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 1128 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1187
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1188 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1247
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1248 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1305
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1143 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1202
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1203 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1262
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1263 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1304
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 1030 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 1087
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 1088 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 1139
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 1140 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 1194
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1195 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1252
>gi|289570001|ref|ZP_06450228.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289543755|gb|EFD47403.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 1833
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 906 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 957
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 958 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1017
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1018 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1077
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1078 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1135
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 300
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 301 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 358
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 359 GNTGNVNTGGF 369
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 184 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 241
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 242 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 297
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 298 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 355
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 356 TGVGNTGNVNTGGF 369
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 973 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1032
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1033 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1092
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1093 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1134
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 860 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 917
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 918 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 969
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 970 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 1024
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1025 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1082
>gi|289445005|ref|ZP_06434749.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289417924|gb|EFD15164.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 1765
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 52 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 111
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 112 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 171
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 172 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 209
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 52 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 111
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 112 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 171
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 172 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 209
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 52 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 111
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 112 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 171
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 172 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 209
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 52 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 111
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 112 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 171
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 172 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 209
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1237 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1296
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1297 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1356
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1357 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1394
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1237 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1296
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1297 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1356
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 1357 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1394
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1237 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1296
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1297 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1356
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1357 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1394
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1237 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1296
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1297 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 1356
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 1357 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1394
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 55 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 114
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 115 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 174
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 175 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 209
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1240 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1299
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1300 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1359
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1360 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1394
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 102/241 (42%), Gaps = 15/241 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S G+ N LGL N GL N +G +G N G +G N G +G N
Sbjct: 1163 SAVGIVGVN---LGLANV-----GLFNAGSGNVGSYNVGAGNVGSYNVGGGNIGGNNVGL 1214
Query: 69 GGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 124
G +G N G GL G +G N + GL N G +G N +G G+GL
Sbjct: 1215 GNVGWGNFGLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 1274
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1275 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLF 1334
Query: 185 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1335 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1394
Query: 242 I 242
I
Sbjct: 1395 I 1395
>gi|433627012|ref|YP_007260641.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
gi|432154618|emb|CCK51856.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
Length = 1781
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 831 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 882
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 883 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 942
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 943 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1002
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1003 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1060
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 207 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 264
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 265 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 320
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 321 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 378
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 379 TGVGNTGNVNTGGF 392
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 898 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 957
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 958 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1017
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1018 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1059
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 785 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 842
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 843 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 894
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 895 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 949
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 950 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1007
>gi|260806097|ref|XP_002597921.1| hypothetical protein BRAFLDRAFT_141428 [Branchiostoma floridae]
gi|229283191|gb|EEN53933.1| hypothetical protein BRAFLDRAFT_141428 [Branchiostoma floridae]
Length = 193
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/168 (14%), Positives = 85/168 (50%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 77
+ G +++C + G + +C + G ++ + G +++ + G +++ + G ++
Sbjct: 2 SSGACIKDCYSSGACITDCYSSGTCIKARYSSGACIKDRYSSGACIKDRYSSGACIKARY 61
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
G +++ + G + + + G +++C + G + +C + G ++ + G +++C
Sbjct: 62 GSGACIKDRYSSGACITDRYSSGACIKDCYSSGACITDCYSSGACIKARYSSGACIKDCY 121
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
+ G +++C + G ++ + G +++ + G +++C++ G +++
Sbjct: 122 SSGACIKDCYSSGACIKARYSSGACIKDSYSSGACIKDCHSSGACIKD 169
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/168 (14%), Positives = 85/168 (50%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 87
+ G +++C + G + +C + G ++ + G +++ + G +++ + G ++
Sbjct: 2 SSGACIKDCYSSGACITDCYSSGTCIKARYSSGACIKDRYSSGACIKDRYSSGACIKARY 61
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
G +++ + G + + + G +++C + G + +C + G ++ + G +++C
Sbjct: 62 GSGACIKDRYSSGACITDRYSSGACIKDCYSSGACITDCYSSGACIKARYSSGACIKDCY 121
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
+ G +++C + G ++ + G +++ + G +++C++ G +++
Sbjct: 122 SSGACIKDCYSSGACIKARYSSGACIKDSYSSGACIKDCHSSGACIKD 169
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/168 (14%), Positives = 85/168 (50%)
Query: 38 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 97
+ G +++C + G + +C + G ++ + G +++ + G +++ + G ++
Sbjct: 2 SSGACIKDCYSSGACITDCYSSGTCIKARYSSGACIKDRYSSGACIKDRYSSGACIKARY 61
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
G +++ + G + + + G +++C + G + +C + G ++ + G +++C
Sbjct: 62 GSGACIKDRYSSGACITDRYSSGACIKDCYSSGACITDCYSSGACIKARYSSGACIKDCY 121
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
+ G +++C + G ++ + G +++ + G +++C++ G +++
Sbjct: 122 SSGACIKDCYSSGACIKARYSSGACIKDSYSSGACIKDCHSSGACIKD 169
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/168 (14%), Positives = 85/168 (50%)
Query: 48 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
+ G +++C + G + +C + G ++ + G +++ + G +++ + G ++
Sbjct: 2 SSGACIKDCYSSGACITDCYSSGTCIKARYSSGACIKDRYSSGACIKDRYSSGACIKARY 61
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G +++ + G + + + G +++C + G + +C + G ++ + G +++C
Sbjct: 62 GSGACIKDRYSSGACITDRYSSGACIKDCYSSGACITDCYSSGACIKARYSSGACIKDCY 121
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
+ G +++C + G ++ + G +++ + G +++C++ G +++
Sbjct: 122 SSGACIKDCYSSGACIKARYSSGACIKDSYSSGACIKDCHSSGACIKD 169
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/163 (14%), Positives = 83/163 (50%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
+++C + G + +C + G ++ + G +++ + G +++ + G ++ G
Sbjct: 7 IKDCYSSGACITDCYSSGTCIKARYSSGACIKDRYSSGACIKDRYSSGACIKARYGSGAC 66
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+++ + G + + + G +++C + G + +C + G ++ + G +++C + G
Sbjct: 67 IKDRYSSGACITDRYSSGACIKDCYSSGACITDCYSSGACIKARYSSGACIKDCYSSGAC 126
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+++C + G ++ + G +++ + G +++C++ G +++
Sbjct: 127 IKDCYSSGACIKARYSSGACIKDSYSSGACIKDCHSSGACIKD 169
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/167 (14%), Positives = 83/167 (49%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
+ G +++C + G + +C + G ++ + G +++ + G +++ + G ++
Sbjct: 2 SSGACIKDCYSSGACITDCYSSGTCIKARYSSGACIKDRYSSGACIKDRYSSGACIKARY 61
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G +++ + G + + + G +++C + G + +C + G ++ + G +++C
Sbjct: 62 GSGACIKDRYSSGACITDRYSSGACIKDCYSSGACITDCYSSGACIKARYSSGACIKDCY 121
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
+ G +++C + G ++ + G +++ + G +++C++ G +
Sbjct: 122 SSGACIKDCYSSGACIKARYSSGACIKDSYSSGACIKDCHSSGACIK 168
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/149 (14%), Positives = 72/149 (48%)
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
+ G +++C + G + +C + G ++ + G +++ + G +++ + G ++
Sbjct: 2 SSGACIKDCYSSGACITDCYSSGTCIKARYSSGACIKDRYSSGACIKDRYSSGACIKARY 61
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
G +++ + G + + + G +++C + G + +C + G ++ + G +++C
Sbjct: 62 GSGACIKDRYSSGACITDRYSSGACIKDCYSSGACITDCYSSGACIKARYSSGACIKDCY 121
Query: 218 TGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
+ G +++C + G ++ + G + S
Sbjct: 122 SSGACIKDCYSSGACIKARYSSGACIKDS 150
>gi|254364588|ref|ZP_04980634.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150102|gb|EBA42147.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
Length = 1050
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|71408138|ref|XP_806491.1| nucleoporin (NUP54/57) [Trypanosoma cruzi strain CL Brener]
gi|70870254|gb|EAN84640.1| nucleoporin (NUP54/57), putative [Trypanosoma cruzi]
Length = 524
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 58/167 (34%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
++ G G GG G TGG G TGG G GG G GG G
Sbjct: 46 VSSSGFGTAANTAGGFGTAANPTGGFGTAANPTGGFGTAANTAGGFGTAANTAGGFGTAA 105
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
GG G GG G GG G GG G GG G TGG G
Sbjct: 106 NTAGGFGTAANTAGGFGTAANTAGGFGTAANTAGGFGTAANTAGGFGTAANPTGGFGTAA 165
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
GG G TGG G TGG G TGG G GG G
Sbjct: 166 NTAGGFGTAANLTGGFGTAANPTGGFGTAANPTGGFGTAANTAGGFG 212
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 58/167 (34%)
Query: 46 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
++ G G GG G TGG G TGG G GG G GG G
Sbjct: 46 VSSSGFGTAANTAGGFGTAANPTGGFGTAANPTGGFGTAANTAGGFGTAANTAGGFGTAA 105
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
GG G GG G GG G GG G GG G TGG G
Sbjct: 106 NTAGGFGTAANTAGGFGTAANTAGGFGTAANTAGGFGTAANTAGGFGTAANPTGGFGTAA 165
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
GG G TGG G TGG G TGG G GG G
Sbjct: 166 NTAGGFGTAANLTGGFGTAANPTGGFGTAANPTGGFGTAANTAGGFG 212
>gi|31793109|ref|NP_855602.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31618700|emb|CAD94653.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length = 1910
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 1125 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 1176
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 1177 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1236
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1237 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1296
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1297 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1354
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 9 STKG-LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRN 65
S+KG L N + LGL N G +G N G L L + N GG GL N + +GL N
Sbjct: 196 SSKGVLANLS---LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGN 250
Query: 66 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
G +G N G G GL N G G N TG +GL N TG +G+ N TG G+
Sbjct: 251 TGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGI 310
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
N T N G G N G+ N G G N NTG L + NTG
Sbjct: 311 GNSGTS----YNTGIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNT 364
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTG N NTG N NTGG
Sbjct: 365 GSSNTGFFNPGNLNTGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1192 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1251
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1252 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1311
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1312 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1353
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 1079 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 1136
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 1137 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 1188
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 1189 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 1243
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1244 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1301
>gi|254550768|ref|ZP_05141215.1| PPE family protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|385998529|ref|YP_005916827.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|344219575|gb|AEN00206.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|379027990|dbj|BAL65723.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 1000
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|253799205|ref|YP_003032206.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|375296455|ref|YP_005100722.1| hypothetical protein TBSG_02254 [Mycobacterium tuberculosis KZN
4207]
gi|392432665|ref|YP_006473709.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253320708|gb|ACT25311.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328458960|gb|AEB04383.1| hypothetical protein TBSG_02254 [Mycobacterium tuberculosis KZN
4207]
gi|392054074|gb|AFM49632.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 1025
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|148822960|ref|YP_001287714.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|297634310|ref|ZP_06952090.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297731297|ref|ZP_06960415.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|313658629|ref|ZP_07815509.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|148721487|gb|ABR06112.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 975
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|298525411|ref|ZP_07012820.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298495205|gb|EFI30499.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 1884
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 1003 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 1054
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 1055 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1114
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1115 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1174
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1175 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1232
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 9 STKG-LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRN 65
S+KG L N + LGL N G +G N G L L + N GG GL N + +GL N
Sbjct: 173 SSKGVLANLS---LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGN 227
Query: 66 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
G +G N G G GL N G G N TG +GL N TG +G+ N TG G+
Sbjct: 228 TGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGI 287
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
N T N G G N G+ N G G N NTG L + NTG
Sbjct: 288 GNSGTS----YNTGIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNT 341
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTG N NTG N NTGG
Sbjct: 342 GSSNTGFFNPGNLNTGVGNTGNVNTGGF 369
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 300
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 301 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 358
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 359 GNTGNVNTGGF 369
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1070 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1129
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1130 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1189
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1190 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1231
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 957 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 1014
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 1015 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 1066
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 1067 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 1121
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1122 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 1179
>gi|341601679|emb|CCC64352.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length = 976
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|6226483|sp|Q52118.1|YMO3_ERWST RecName: Full=Uncharacterized protein in mobD 3'region
gi|886362|gb|AAA69501.1| unknown [Plasmid pSW200]
Length = 295
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 67/215 (31%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G+ L + + G L + N L + N L N L L N
Sbjct: 67 INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSN 126
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N G L N N L N N G L + N L + L N + L N
Sbjct: 127 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSN 186
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
N G L N N L N N G L + N L + L N + L +
Sbjct: 187 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSD 246
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N L N + L N G L + N G
Sbjct: 247 ANLSDANLTNVDLKRADLSNAILKGANLLHINVEG 281
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 67/215 (31%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N G+ L + + G L + N L + N L N L L N
Sbjct: 67 INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSN 126
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
N G L N N L N N G L + N L + L N + L N
Sbjct: 127 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSN 186
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
N G L N N L N N G L + N L + L N + L +
Sbjct: 187 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSD 246
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
N L N + L N G L + N G
Sbjct: 247 ANLSDANLTNVDLKRADLSNAILKGANLLHINVEG 281
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 64/208 (30%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
L + + G L + N L + N L N L L N N G
Sbjct: 74 LSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSNANLSGAD 133
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N N L N N G L + N L + L N + L N N G
Sbjct: 134 LTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSNANLSGAD 193
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
L N N L N N G L + N L + L N + L + N
Sbjct: 194 LTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSDANLSDAN 253
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 220
L N + L N G L + N G
Sbjct: 254 LTNVDLKRADLSNAILKGANLLHINVEG 281
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 64/200 (32%), Gaps = 5/200 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNT-----GGLGLRNCNTGGLGLRNCNTGG 60
A +S L + + L + N G L + N L N N G L N N
Sbjct: 82 AYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSNANLSGADLTNANLNQ 141
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
L N N G L + N L + L N + L N N G L N N
Sbjct: 142 TDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSNANLSGADLTNANLNQ 201
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L N N G L + N L + L N + L + N L N +
Sbjct: 202 TDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSDANLSDANLTNVDLKR 261
Query: 181 LGLRNCNTGGLGLRNCNTGG 200
L N G L + N G
Sbjct: 262 ADLSNAILKGANLLHINVEG 281
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 55/166 (33%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 64
+A +S L N N G L N N L N N G L + N L + L
Sbjct: 116 MAYLSEADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLS 175
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
N + L N N G L N N L N N G L + N L + L
Sbjct: 176 NADLKRADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLS 235
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
N + L + N L N + L N G L + N G
Sbjct: 236 NADLKRADLSDANLSDANLTNVDLKRADLSNAILKGANLLHINVEG 281
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 44/139 (31%)
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
N G+ L + + G L + N L + N L N L L N
Sbjct: 67 INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSN 126
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
N G L N N L N N G L + N L + L N + L N
Sbjct: 127 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSN 186
Query: 226 CNTGGLGLRNCNTGGLIVP 244
N G L N N +P
Sbjct: 187 ANLSGADLTNANLNQTDLP 205
>gi|121637661|ref|YP_977884.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990136|ref|YP_002644823.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378771495|ref|YP_005171228.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|121493308|emb|CAL71779.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224773249|dbj|BAH26055.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|356593816|gb|AET19045.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
Length = 1026
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|307172999|gb|EFN64141.1| hypothetical protein EAG_08242 [Camponotus floridanus]
Length = 113
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 99
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 158
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 188
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 218
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 228
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 44/109 (40%)
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
L NCN L NCN L NCN L NCN L NCN L NCN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
L NCN L NCN L NCN L NCN L NCN
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 43/104 (41%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
NCN L NCN L NCN L NCN L NCN L NCN L
Sbjct: 8 NCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSN 67
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
NCN L NCN L NCN L NCN L NCN
Sbjct: 68 NCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
>gi|124808566|ref|XP_001348348.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
gi|74864292|sp|Q8ILR9.1|YPF17_PLAF7 RecName: Full=Protein PF14_0175
gi|23497240|gb|AAN36787.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
Length = 4662
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 3/216 (1%)
Query: 42 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
L N +G+ N +G+ N +G+ N +G+ N + + N +
Sbjct: 3932 SLNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVSMNQPNINNV 3991
Query: 102 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ N + + N + NT + +T + +T + +T
Sbjct: 3992 NMNQPNINNVSMNQPNINNFSMNQSNTNNFNMNKPSTSSFSMNQPSTNNFSMNKSSTNNF 4051
Query: 162 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + + +T + +T +T + N + + NT +
Sbjct: 4052 SINQTSANNFSMHQPSTNNFSMNKPSTNNFSTNKPSTNNFSMNQPNINNISMNQPNTNNV 4111
Query: 222 GLRNCNTGGLGLRNCNTGGLIVPK---SKRGAQENA 254
+ N N G+ + N I + SK+ ENA
Sbjct: 4112 HMNNLNMNQSGMNHTNMTSPIFNQSNSSKQSVNENA 4147
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/223 (13%), Positives = 70/223 (31%), Gaps = 3/223 (1%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
L N +G+ N +G+ N +G+ N +G+ N + + N +
Sbjct: 3932 SLNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVSMNQPNINNV 3991
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
+ N + + N + NT + +T + +T + +T
Sbjct: 3992 NMNQPNINNVSMNQPNINNFSMNQSNTNNFNMNKPSTSSFSMNQPSTNNFSMNKSSTNNF 4051
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
+ + + +T + +T +T + N + + NT +
Sbjct: 4052 SINQTSANNFSMHQPSTNNFSMNKPSTNNFSTNKPSTNNFSMNQPNINNISMNQPNTNNV 4111
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
+ N N G+ + N N+ ++ N + P
Sbjct: 4112 HMNNLNMNQSGMNHTNMTSPIFNQSNSSK---QSVNENAFVPP 4151
>gi|449063817|ref|YP_007430900.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|449032325|gb|AGE67752.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1001
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|289449037|ref|ZP_06438781.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289421995|gb|EFD19196.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1458
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 143
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
>gi|31792941|ref|NP_855434.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31618532|emb|CAD94484.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length = 1051
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|433629998|ref|YP_007263626.1| Conserved protein of unknown function, PPE family (fragment)
[Mycobacterium canettii CIPT 140070010]
gi|432161591|emb|CCK58936.1| Conserved protein of unknown function, PPE family (fragment)
[Mycobacterium canettii CIPT 140070010]
Length = 1545
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 86/209 (41%), Gaps = 6/209 (2%)
Query: 24 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 83
N G +G N +G LG N +G +G N G LG N G G N G GL
Sbjct: 1168 ANLGFGNIGSANFGSGNLGDFNLGSGNVGGYNVGPGNLGSYNIGFGNAGDYNLGLGNTGL 1227
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
N G G N G+GL G G N + +GL N TG +G+ N TG G+
Sbjct: 1228 NNVGFGNTGTNNV---GIGLSGIGQVGFGAWNSGSANVGLFNSGTGNVGVFNSGTGNWGV 1284
Query: 144 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
N GL N NTG NTG + N+GG NTG + NTG
Sbjct: 1285 GNSGESNTGLFNSGRYNTGVFNTGLLNTGVANPGSYNSGGFNAGVSNTGSFNPGDTNTGW 1344
Query: 201 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
+ NTG + NTGG + + N G
Sbjct: 1345 FNTGDLNTGVGNTGDVNTGGFNVGSMNNG 1373
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 86/209 (41%), Gaps = 6/209 (2%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
N G +G N +G LG N +G +G N G LG N G G N G GL
Sbjct: 1168 ANLGFGNIGSANFGSGNLGDFNLGSGNVGGYNVGPGNLGSYNIGFGNAGDYNLGLGNTGL 1227
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
N G G N G+GL G G N + +GL N TG +G+ N TG G+
Sbjct: 1228 NNVGFGNTGTNNV---GIGLSGIGQVGFGAWNSGSANVGLFNSGTGNVGVFNSGTGNWGV 1284
Query: 154 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
N GL N NTG NTG + N+GG NTG + NTG
Sbjct: 1285 GNSGESNTGLFNSGRYNTGVFNTGLLNTGVANPGSYNSGGFNAGVSNTGSFNPGDTNTGW 1344
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+ NTG + NTGG + + N G
Sbjct: 1345 FNTGDLNTGVGNTGDVNTGGFNVGSMNNG 1373
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 87/209 (41%), Gaps = 6/209 (2%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
N G +G N +G LG N +G +G N G LG N G G N G GL
Sbjct: 227 ANLGFGNIGSANFGSGNLGDFNLGSGNVGGYNVGPGNLGSYNIGFGNAGDYNLGLGNTGL 286
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
N G G N G+GL G G N + +GL N TG +G+ N TG G+
Sbjct: 287 NNVGFGNTGTNNV---GIGLSGIGQVGFGAWNSGSANVGLFNSGTGNVGVFNSGTGNWGV 343
Query: 154 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
N GL N NTG NTG + N+GG NTG + NTG
Sbjct: 344 GNSGESNTGLFNSGRYNTGVFNTGLLNTGVANPGSYNSGGFNAGVSNTGSFNPGDTNTGW 403
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+ + NTG + NTGG + + N G
Sbjct: 404 VNTGDLNTGVGNTGDVNTGGFNVGSMNNG 432
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 82/201 (40%), Gaps = 6/201 (2%)
Query: 44 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 103
N G +G N +G LG N +G +G N G LG N G G N G GL
Sbjct: 1168 ANLGFGNIGSANFGSGNLGDFNLGSGNVGGYNVGPGNLGSYNIGFGNAGDYNLGLGNTGL 1227
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 163
N G G N G+GL G G N + +GL N TG +G+ N TG G+
Sbjct: 1228 NNVGFGNTGTNNV---GIGLSGIGQVGFGAWNSGSANVGLFNSGTGNVGVFNSGTGNWGV 1284
Query: 164 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 220
N GL N NTG NTG + N+GG NTG + NTG
Sbjct: 1285 GNSGESNTGLFNSGRYNTGVFNTGLLNTGVANPGSYNSGGFNAGVSNTGSFNPGDTNTGW 1344
Query: 221 LGLRNCNTGGLGLRNCNTGGL 241
+ NTG + NTGG
Sbjct: 1345 FNTGDLNTGVGNTGDVNTGGF 1365
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
N +G LG N +G LG N G LG N G G N G GL N G G
Sbjct: 683 FNFGSGNLGGFNVGSGNLGGYNVGPGNLGSFNIGFGNAGDYNLGLGNTGLNNVGFGNTGT 742
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
N G+GL G G N + +GL N G +G N TG G+ N + G+
Sbjct: 743 NNI---GIGLTGTGQIGFGAWNSGSANVGLFNSGAGNIGFFNSGTGNFGIGNSGSFNTGI 799
Query: 174 RNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N + G+ N NTG + N+GG NTG + NTG + NTG
Sbjct: 800 ANTGSANTGVFNSGLVNTGWGNAGSYNSGGFNTGAFNTGSFNPGDVNTGWFNTGDINTGV 859
Query: 231 LGLRNCNTGGLIVPKSKRGAQEN--ASRSENE 260
+ NTG I G Q N R +N+
Sbjct: 860 GNTGDINTGAFI-----SGEQSNGLFWRGDNQ 886
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 83/201 (41%), Gaps = 6/201 (2%)
Query: 44 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 103
N G +G N +G LG N +G +G N G LG N G G N G GL
Sbjct: 227 ANLGFGNIGSANFGSGNLGDFNLGSGNVGGYNVGPGNLGSYNIGFGNAGDYNLGLGNTGL 286
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 163
N G G N G+GL G G N + +GL N TG +G+ N TG G+
Sbjct: 287 NNVGFGNTGTNNV---GIGLSGIGQVGFGAWNSGSANVGLFNSGTGNVGVFNSGTGNWGV 343
Query: 164 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 220
N GL N NTG NTG + N+GG NTG + NTG
Sbjct: 344 GNSGESNTGLFNSGRYNTGVFNTGLLNTGVANPGSYNSGGFNAGVSNTGSFNPGDTNTGW 403
Query: 221 LGLRNCNTGGLGLRNCNTGGL 241
+ + NTG + NTGG
Sbjct: 404 VNTGDLNTGVGNTGDVNTGGF 424
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 85/211 (40%), Gaps = 7/211 (3%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
N +G LG N +G LG N G LG N G G N G GL N G G
Sbjct: 683 FNFGSGNLGGFNVGSGNLGGYNVGPGNLGSFNIGFGNAGDYNLGLGNTGLNNVGFGNTGT 742
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
N G+GL G G N + +GL N G +G N TG G+ N + G+
Sbjct: 743 NNI---GIGLTGTGQIGFGAWNSGSANVGLFNSGAGNIGFFNSGTGNFGIGNSGSFNTGI 799
Query: 154 RNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
N + G+ N NTG + N+GG NTG + NTG + NTG
Sbjct: 800 ANTGSANTGVFNSGLVNTGWGNAGSYNSGGFNTGAFNTGSFNPGDVNTGWFNTGDINTGV 859
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG + + GL R N G +
Sbjct: 860 GNTGDINTGAF-ISGEQSNGLFWRGDNQGQI 889
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 66/164 (40%), Gaps = 7/164 (4%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N G G N G+GL G G N + +GL N G +G N TG
Sbjct: 730 TGLNNVGFGNTGTNNI---GIGLTGTGQIGFGAWNSGSANVGLFNSGAGNIGFFNSGTGN 786
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G+ N + G+ N + G+ N NTG + N+GG NTG + N
Sbjct: 787 FGIGNSGSFNTGIANTGSANTGVFNSGLVNTGWGNAGSYNSGGFNTGAFNTGSFNPGDVN 846
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
TG + NTG + NTG + + GL R N G +
Sbjct: 847 TGWFNTGDINTGVGNTGDINTGAF-ISGEQSNGLFWRGDNQGQI 889
>gi|385996221|ref|YP_005914519.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339296175|gb|AEJ48286.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 420
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 81/194 (41%), Gaps = 8/194 (4%)
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 179
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
LGL N TG +G N TG G+ N + G+ N T GL N GG N G
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGL--FNAGGFNTGVVNAG 360
Query: 240 GLIVPKSKRGAQEN 253
L + +RG ++
Sbjct: 361 SLQHGQLQRGQHQH 374
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 70/168 (41%), Gaps = 6/168 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N +GL N LG N LG N +G G N G N G
Sbjct: 186 AGLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---G 242
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNT 128
LGL G +GL N + GL N G +G N N G+GL N G+G N T
Sbjct: 243 LGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGT 301
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 302 GNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNA 349
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 139
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNA 349
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 32 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 91
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 92 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 149
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNA 349
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 42 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 102 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 159
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNA 349
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 52 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
GL N +GL N LG N LG N +G G N G N GL
Sbjct: 187 GLGNVGNYNVGLGNVGIFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNS---GL 243
Query: 112 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTG 169
GL G +GL N + GL N G +G N N G+GL N G+G N TG
Sbjct: 244 GLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTG 302
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
LGL N TG +G N TG G+ N + G+ N T GL N
Sbjct: 303 NLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNA 349
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN------TGGLGLRNCNTGGL 61
I G N LG N +G G N G N G +GL N +
Sbjct: 203 IFNLGAANVGAQNLGAANAGSGNFGFGNIGNANFGFGNSGLGLPPGMGNIGLGNAGSSNY 262
Query: 62 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
GL N G +G N N G+GL N G+G N TG LGL N TG +G N TG
Sbjct: 263 GLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTG 322
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G+ N + G+ N T GL N
Sbjct: 323 NFGVFNSGSYNTGVGNAGTASTGLFNA 349
>gi|183981049|ref|YP_001849340.1| PPE family protein [Mycobacterium marinum M]
gi|183174375|gb|ACC39485.1| PPE family protein [Mycobacterium marinum M]
Length = 1398
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 87/214 (40%), Gaps = 25/214 (11%)
Query: 57 NTGGL--GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
N GGL G N +G G N N G+GL N G+G N G GL N TG +G
Sbjct: 277 NLGGLNTGFANAGSGNFGFANTGNNNIGIGLTGDNQVGIGGLNSGVGNFGLFNSGTGNVG 336
Query: 113 LRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
L N TG G+ N G GL N NTG L + NTG L + N NTG L + N G
Sbjct: 337 LFNSGTGNFGIGNSGAYGTGLFNSGQANTGLLNAGSFNTGLLDVGNANTGSLNTGSFNMG 396
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---------GLGLR------ 214
NTG L NTG + NTG + + N G G+ R
Sbjct: 397 SFNPGPSNTGALNTGTANTGWFNTGSLNTGAFNIGDMNNGLFNTGEMNNGIFYRGVGQGN 456
Query: 215 ---NCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
+ T L L G+ + N + + VP
Sbjct: 457 FYFSITTPDLTLPPLEIPGITIPNLSLPPITVPA 490
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 101/229 (44%), Gaps = 15/229 (6%)
Query: 14 RNCNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--- 65
+ +T GL N +G + G+ N +G LG N +G LG N LG N
Sbjct: 206 ADASTVNFGLANIGSGNVGNANNGIGNLGSGNLGNFNLGSGNLGSANAGWANLGSNNIGG 265
Query: 66 CNTGGLGLRNCNTGGL--GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 121
N+GG L N GGL G N +G G N N G+GL N G+G N G
Sbjct: 266 ANSGGNNLGWGNLGGLNTGFANAGSGNFGFANTGNNNIGIGLTGDNQVGIGGLNSGVGNF 325
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNT 178
GL N TG +GL N TG G+ N G GL N NTG L + NTG L + N NT
Sbjct: 326 GLFNSGTGNVGLFNSGTGNFGIGNSGAYGTGLFNSGQANTGLLNAGSFNTGLLDVGNANT 385
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G L + N G NTG L NTG + NTG + + N
Sbjct: 386 GSLNTGSFNMGSFNPGPSNTGALNTGTANTGWFNTGSLNTGAFNIGDMN 434
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 92/235 (39%), Gaps = 22/235 (9%)
Query: 27 NTGGLGLRNCNTGG--LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
N GGL N G G N N G+GL N G+G N G GL N TG +G
Sbjct: 277 NLGGLNTGFANAGSGNFGFANTGNNNIGIGLTGDNQVGIGGLNSGVGNFGLFNSGTGNVG 336
Query: 83 LRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
L N TG G+ N G GL N NTG L + NTG L + N NTG L + N G
Sbjct: 337 LFNSGTGNFGIGNSGAYGTGLFNSGQANTGLLNAGSFNTGLLDVGNANTGSLNTGSFNMG 396
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----GLGLRN 195
NTG L NTG + NTG + + N G NTG G+ R
Sbjct: 397 SFNPGPSNTGALNTGTANTGWFNTGSLNTGAFNIGDMNNGLF-----NTGEMNNGIFYRG 451
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGA 250
G + T L L G+ + N L L L +P + A
Sbjct: 452 VGQGNFYF-SITTPDLTLPPLEIPGITIPN-----LSLPPITVPALTIPAATTPA 500
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 12 GLRNCNTGGL-----GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGL 63
GL N +G + G+ N +G LG N +G LG N LG N N+GG L
Sbjct: 214 GLANIGSGNVGNANNGIGNLGSGNLGNFNLGSGNLGSANAGWANLGSNNIGGANSGGNNL 273
Query: 64 RNCNTGGL--GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N GGL G N +G G N N G+GL N G+G N G GL N TG
Sbjct: 274 GWGNLGGLNTGFANAGSGNFGFANTGNNNIGIGLTGDNQVGIGGLNSGVGNFGLFNSGTG 333
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
+GL N TG G+ N G GL N NTG L + NTG L + N NTG L +
Sbjct: 334 NVGLFNSGTGNFGIGNSGAYGTGLFNSGQANTGLLNAGSFNTGLLDVGNANTGSLNTGSF 393
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
N G NTG L NTG + NTG + + N
Sbjct: 394 NMGSFNPGPSNTGALNTGTANTGWFNTGSLNTGAFNIGDMN 434
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 84/183 (45%), Gaps = 15/183 (8%)
Query: 64 RNCNTGGLGLRNCNTGGLG-----LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--- 115
+ +T GL N +G +G + N +G LG N +G LG N LG N
Sbjct: 206 ADASTVNFGLANIGSGNVGNANNGIGNLGSGNLGNFNLGSGNLGSANAGWANLGSNNIGG 265
Query: 116 CNTGGLGLRNCNTGGL--GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGL 171
N+GG L N GGL G N +G G N N G+GL N G+G N G
Sbjct: 266 ANSGGNNLGWGNLGGLNTGFANAGSGNFGFANTGNNNIGIGLTGDNQVGIGGLNSGVGNF 325
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNT 228
GL N TG +GL N TG G+ N G GL N NTG L + NTG L + N NT
Sbjct: 326 GLFNSGTGNVGLFNSGTGNFGIGNSGAYGTGLFNSGQANTGLLNAGSFNTGLLDVGNANT 385
Query: 229 GGL 231
G L
Sbjct: 386 GSL 388
>gi|289757864|ref|ZP_06517242.1| predicted protein [Mycobacterium tuberculosis T85]
gi|289713428|gb|EFD77440.1| predicted protein [Mycobacterium tuberculosis T85]
Length = 979
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|260791410|ref|XP_002590722.1| hypothetical protein BRAFLDRAFT_89528 [Branchiostoma floridae]
gi|229275918|gb|EEN46733.1| hypothetical protein BRAFLDRAFT_89528 [Branchiostoma floridae]
Length = 374
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 71/208 (34%), Gaps = 37/208 (17%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGL------GLRNCNTGGLGLRNCNTGGLGLRNCNT-GGLG 112
G+ R N G+G R N N TG +G R N NT G+G
Sbjct: 54 GIYYRKLNRTGIGYRKLNRSPFIKLNRSSFINTRTG-IGYRKLNRSPF----INTRTGIG 108
Query: 113 LRNCNTGGLGLRNCNTGGL------GLRNCNTGGLGLRNCNTGGLGLRNCNTGGL----- 161
R N G+G R N N TG +G R N G+G R N
Sbjct: 109 YRKLNRTGIGYRKLNRSSFIKLNRSPFINTRTG-IGYRKLNRTGIGYRKLNRSPFIKLNR 167
Query: 162 -GLRNCNTGGLGLRNCNTGGLGLRNCNT-GGLGLRNCNTGGLGLRNCNTGGL-----GLR 214
N TG +G R N NT G+G R G+G R N
Sbjct: 168 SSFINTRTG-IGYRKLNRSPF----INTRTGIGYRKLTRTGIGYRKLNRSSFIKLNHSFI 222
Query: 215 NCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N TG +G R N G+G R N I
Sbjct: 223 NTRTG-IGYRKLNRTGIGYRKLNRSPFI 249
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 52/150 (34%), Gaps = 25/150 (16%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGL------GLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-- 71
G+G R N G+G R N N T G+G R N G+G R N
Sbjct: 106 GIGYRKLNRTGIGYRKLNRSSFIKLNRSPFINTRT-GIGYRKLNRTGIGYRKLNRSPFIK 164
Query: 72 ----GLRNCNTGGLGLRNCNTGGLGLRNCNT-GGLGLRNCNTGGLGLRNCNTGGL----- 121
N T G+G R N NT G+G R G+G R N
Sbjct: 165 LNRSSFINTRT-GIGYRKLNRSPF----INTRTGIGYRKLTRTGIGYRKLNRSSFIKLNH 219
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
N T G+G R N G+G R N
Sbjct: 220 SFINTRT-GIGYRKLNRTGIGYRKLNRSPF 248
>gi|385994897|ref|YP_005913195.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339294851|gb|AEJ46962.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 1248
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 505 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 556
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 557 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 616
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 617 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 676
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 677 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 734
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 572 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 631
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 632 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 691
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 692 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 733
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 459 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 516
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 517 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 568
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 569 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 623
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 624 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 681
>gi|428314172|ref|YP_007125149.1| low-complexity protein [Microcoleus sp. PCC 7113]
gi|428255784|gb|AFZ21743.1| putative low-complexity protein [Microcoleus sp. PCC 7113]
Length = 276
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 73/219 (33%), Gaps = 11/219 (5%)
Query: 35 NCNTGGLGL-RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
N GL L R+ + G + L + G+ L N L G L
Sbjct: 54 NATLTGLDLKRDYDQGERNFSQIDLAQENLVWMDLSGVNLSQANLQQAKLSAATLKGAKL 113
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
R N G LR + L+N + G L+ + L N N G L N +
Sbjct: 114 REANLQGANLR-----AVDLKNADLCGANLQGADLKRADLINTNLSGADLSGANLTDVIF 168
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-----CNTGGLGLRNCNT 208
N LR N GL L + G L N G L+ N GL + + N
Sbjct: 169 EKVNLREANLRGANLQGLDLSEADLTGADLSEANLNGARLQEAQLSQANLSGLDMTHLNL 228
Query: 209 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSK 247
G LR N L G LR N I+ ++K
Sbjct: 229 SGANLRQANLSEAQLSQAQLYGTDLRGANLDEAILDQAK 267
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 69/216 (31%), Gaps = 13/216 (6%)
Query: 11 KGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+G RN + L N + G+ L N L G LR N G LR
Sbjct: 68 QGERNFSQIDLAQENLVWMDLSGVNLSQANLQQAKLSAATLKGAKLREANLQGANLR--- 124
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
+ L+N + G L+ + L N N G L N + N LR N
Sbjct: 125 --AVDLKNADLCGANLQGADLKRADLINTNLSGADLSGANLTDVIFEKVNLREANLRGAN 182
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
GL L + G L N G L+ L N GL + + N G LR N
Sbjct: 183 LQGLDLSEADLTGADLSEANLNGARLQEAQ-----LSQANLSGLDMTHLNLSGANLRQAN 237
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
L G LR N L G L
Sbjct: 238 LSEAQLSQAQLYGTDLRGANLDEAILDQAKLAGAKL 273
>gi|289745652|ref|ZP_06505030.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289686180|gb|EFD53668.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 1318
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 529 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 580
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 581 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 640
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 641 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 700
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 701 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 758
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 596 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 655
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 656 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 715
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 716 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 757
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 96/238 (40%), Gaps = 22/238 (9%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRNCN 67
+ GL N +T GL ++G +G + G +RN G L N G L L N N
Sbjct: 483 TVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFANDGTLNLGNAN 540
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
LG N +G +G N +G N G G N + G N + LG N
Sbjct: 541 ---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGSNNLGFANTG 592
Query: 128 TG-GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLR 184
G L N G +G N G N G +G N TG G+GL N G G
Sbjct: 593 PGLTEALHNIGFGNIGGNNY-----GFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGAL 647
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +G +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 648 NSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTG 705
>gi|57116904|ref|YP_177830.1| PPE family protein PPE24 [Mycobacterium tuberculosis H37Rv]
gi|148661552|ref|YP_001283075.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|397673616|ref|YP_006515151.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|81415779|sp|Q79FL2.1|PPE24_MYCTU RecName: Full=Uncharacterized PPE family protein PPE24
gi|148505704|gb|ABQ73513.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|395138521|gb|AFN49680.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444895263|emb|CCP44519.1| PPE family protein PPE24 [Mycobacterium tuberculosis H37Rv]
Length = 1053
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|289753844|ref|ZP_06513222.1| predicted protein [Mycobacterium tuberculosis EAS054]
gi|289694431|gb|EFD61860.1| predicted protein [Mycobacterium tuberculosis EAS054]
Length = 1012
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 84 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 138
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 139 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 198
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 199 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 258
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 259 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 290
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 84 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 138
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 139 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 198
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 199 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 258
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 259 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 290
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 84 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 138
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 139 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 198
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 199 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 252
>gi|348665116|gb|EGZ04950.1| hypothetical protein PHYSODRAFT_535016 [Phytophthora sojae]
Length = 261
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 128/243 (52%), Gaps = 51/243 (20%)
Query: 7 PISTKGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG---LGLRNCNTGG---LGLRNCN 57
IS +G + N+ +G+R C N+ + +R CN+ +G+R CN+ +G+R CN
Sbjct: 6 SISVRGCNSTNSIRVGVRGCNSTNSNSISVRGCNSTNSIRVGVRGCNSTNSIRVGVRGCN 65
Query: 58 TGG---LGLRNC---NTGGLGLRNCNTGG---LGLRNCNTGG---LGLRNC---NTGGLG 102
+ +G+R C N+ + +R CN+ +G+R CN+ +G+R C N+ +
Sbjct: 66 STNSIRVGVRGCNSTNSNSISVRGCNSTNSIRVGVRGCNSTNSIRVGVRGCNSTNSNSIS 125
Query: 103 LRNCNTGG---LGLRNCNTGG---LGLRNCNTGG---LGLRNC---NTGGLGLRNCNTGG 150
+R CN+ +G+R CN+ +G+R CN+ +G+R C N+ + +R CN+
Sbjct: 126 VRGCNSTNSIRVGVRGCNSTNSIRVGVRGCNSTNSIRVGVRGCNSTNSNSISVRGCNSTN 185
Query: 151 ---LGLRNCNTGG---LGLRNC---NTGGLGLRNCNTGG---LGLRNCNTGG---LGLRN 195
+G+R CN+ +G+R C N+ + +R CN+ +G+R CN+ +G+R
Sbjct: 186 SIRVGVRGCNSTNSIRVGVRGCNSTNSNSISVRGCNSTNSIRVGVRGCNSTNSIRVGVRG 245
Query: 196 CNT 198
CN+
Sbjct: 246 CNS 248
>gi|424806819|ref|ZP_18232250.1| LOW QUALITY PROTEIN: PPE family protein, partial [Mycobacterium
tuberculosis W-148]
gi|326906095|gb|EGE53028.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
W-148]
Length = 436
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 82/195 (42%), Gaps = 9/195 (4%)
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
N G G N T GL N TG GL N TG +G+ N TGG G+ +G+
Sbjct: 1 MNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGI 60
Query: 124 RNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
N+G +GL N TG +G+ N TG +G+ N TG G+ N N NTG L
Sbjct: 61 GGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS-------GNYNTGLL 113
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG N NTG + NTG + NTG + NTG + TG
Sbjct: 114 NAGLVNTGIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTGMANAGDYGTGAF 173
Query: 242 IVPKSKRGAQENASR 256
I G A R
Sbjct: 174 ITGSMNNGLLWRADR 188
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
N G G N T GL N TG GL N TG +G+ N TGG G+ +G+
Sbjct: 1 MNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGI 60
Query: 74 RNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 128
N+G +GL N TG +G+ N TG +G+ N TG G+ N NTG L NT
Sbjct: 61 GGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNT 120
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
G N NTG + NTG + NTG + NTG
Sbjct: 121 GIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTG 161
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 24 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 83
N G G N T GL N TG GL N TG +G+ N TGG G+ +G+
Sbjct: 1 MNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGI 60
Query: 84 RNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 138
N+G +GL N TG +G+ N TG +G+ N TG G+ N NTG L NT
Sbjct: 61 GGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNT 120
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G N NTG + NTG + NTG + NTG
Sbjct: 121 GIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTG 161
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
N G G N T GL N TG GL N TG +G+ N TGG G+ +G+
Sbjct: 1 MNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGI 60
Query: 94 RNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 148
N+G +GL N TG +G+ N TG +G+ N TG G+ N NTG L NT
Sbjct: 61 GGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNT 120
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
G N NTG + NTG + NTG + NTG
Sbjct: 121 GIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTG 161
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 44 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 103
N G G N T GL N TG GL N TG +G+ N TGG G+ +G+
Sbjct: 1 MNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGI 60
Query: 104 RNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 158
N+G +GL N TG +G+ N TG +G+ N TG G+ N NTG L NT
Sbjct: 61 GGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNT 120
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
G N NTG + NTG + NTG + NTG
Sbjct: 121 GIANPGNHNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTG 161
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G N T GL N TG GL N TG +G+ N TGG G+ +G+ N+G
Sbjct: 8 TGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTNSGS 67
Query: 71 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRN 125
+GL N TG +G+ N TG +G+ N TG G+ N NTG L NTG N
Sbjct: 68 FNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNSGNYNTGLLNAGLVNTGIANPGN 127
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
NTG + NTG + NTG + NTG
Sbjct: 128 HNTGLFNIGTFNTGIANPGHYNTGSYNTGSYNTG 161
>gi|254231946|ref|ZP_04925273.1| PPE family protein [Mycobacterium tuberculosis C]
gi|124601005|gb|EAY60015.1| PPE family protein [Mycobacterium tuberculosis C]
Length = 1078
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|424804244|ref|ZP_18229675.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|326903520|gb|EGE50453.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length = 1334
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 101/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 522 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 573
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 574 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 633
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 634 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 693
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 694 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 751
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 589 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 648
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 649 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 708
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 709 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 750
>gi|289574424|ref|ZP_06454651.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289538855|gb|EFD43433.1| PPE family protein [Mycobacterium tuberculosis K85]
Length = 1104
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|385991141|ref|YP_005909439.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|339298334|gb|AEJ50444.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length = 1053
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|386004714|ref|YP_005922993.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
gi|380725202|gb|AFE12997.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
Length = 1053
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|440581222|emb|CCG11625.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 1129
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|289745807|ref|ZP_06505185.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289686335|gb|EFD53823.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 1053
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|289745649|ref|ZP_06505027.1| predicted protein [Mycobacterium tuberculosis 02_1987]
gi|289758026|ref|ZP_06517404.1| predicted protein [Mycobacterium tuberculosis T85]
gi|424804247|ref|ZP_18229678.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|289686177|gb|EFD53665.1| predicted protein [Mycobacterium tuberculosis 02_1987]
gi|289713590|gb|EFD77602.1| predicted protein [Mycobacterium tuberculosis T85]
gi|326903523|gb|EGE50456.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length = 547
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
>gi|433633933|ref|YP_007267560.1| Conserved protein of unknown function, PPE family, PPE13
[Mycobacterium canettii CIPT 140070017]
gi|432165526|emb|CCK63004.1| Conserved protein of unknown function, PPE family, PPE13
[Mycobacterium canettii CIPT 140070017]
Length = 612
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 91/234 (38%), Gaps = 10/234 (4%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
G N +G G N G G RN G G N +G LG N +G G N G
Sbjct: 275 AGFLNIGSGNEGSGNLGFGNDGDRNLGFGNFGNTNVGSGNLGDFNLGSGNNGFSNVGFGN 334
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
LG N G G N G GL N G+G N TG G N +G N +
Sbjct: 335 LGDNNLGFGNSGNNNI---GFGLTGNNMIGIGALNSGTGNFGFGNSGNNNIGFFNSGSNN 391
Query: 131 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRN 185
+G N G N NTG + NTG N NTG G +N G G +N
Sbjct: 392 VGFFNSGDNNFGFSNAGDTNTGFWNAADRNTGFGNSGNANTGFGNSGFQNTGFGNAGFQN 451
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+G G +N G G +N G G N G G + NTGG + NTG
Sbjct: 452 TGSGNAGFQNTGAGNAGSQNTGFGNAGDDNTGWGNSG--DTNTGGFNSGDLNTG 503
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 92/254 (36%), Gaps = 30/254 (11%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG-------GLGLRNCNTGGLGLRNCN 67
N +G LG N +G G N G LG N G G GL N G+G N
Sbjct: 309 NVGSGNLGDFNLGSGNNGFSNVGFGNLGDNNLGFGNSGNNNIGFGLTGNNMIGIGALNSG 368
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 124
TG G N +G N + +G N G N NTG + NTG
Sbjct: 369 TGNFGFGNSGNNNIGFFNSGSNNVGFFNSGDNNFGFSNAGDTNTGFWNAADRNTGFGNSG 428
Query: 125 NCNT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN------- 175
N NT G G +N G G +N +G G +N G G +N G G N
Sbjct: 429 NANTGFGNSGFQNTGFGNAGFQNTGSGNAGFQNTGAGNAGSQNTGFGNAGDDNTGWGNSG 488
Query: 176 -CNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
NTGG + NTG G N TG G N G G +N G G
Sbjct: 489 DTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFG 548
Query: 225 NCNTGGLGLRNCNT 238
N + G +N T
Sbjct: 549 NASDTSSGFQNAGT 562
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 87/228 (38%), Gaps = 8/228 (3%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
N +G G N G G N +G G N +G G N G G RN G G
Sbjct: 248 ANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNDGDRNLGFGNFGN 307
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
N +G LG N +G G N G LG N G G N G GL N G+G
Sbjct: 308 TNVGSGNLGDFNLGSGNNGFSNVGFGNLGDNNLGFGNSGNNNI---GFGLTGNNMIGIGA 364
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGG 190
N TG G N +G N + +G N G N NTG + NTG
Sbjct: 365 LNSGTGNFGFGNSGNNNIGFFNSGSNNVGFFNSGDNNFGFSNAGDTNTGFWNAADRNTGF 424
Query: 191 LGLRNCNT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N NT G G +N G G +N +G G +N G G +N
Sbjct: 425 GNSGNANTGFGNSGFQNTGFGNAGFQNTGSGNAGFQNTGAGNAGSQNT 472
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 90/237 (37%), Gaps = 12/237 (5%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G G N G +G N G +G N +G G N G G N +G G
Sbjct: 219 NVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFL 278
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
N +G G N G G RN G G N +G LG N +G G N G LG
Sbjct: 279 NIGSGNEGSGNLGFGNDGDRNLGFGNFGNTNVGSGNLGDFNLGSGNNGFSNVGFGNLGDN 338
Query: 135 NCNTG-------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
N G G GL N G+G N TG G N +G N + +G N
Sbjct: 339 NLGFGNSGNNNIGFGLTGNNMIGIGALNSGTGNFGFGNSGNNNIGFFNSGSNNVGFFNSG 398
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT--GGLGLRNCNTGGLGLRNCNTG 239
G N NTG + NTG N NT G G +N G G +N +G
Sbjct: 399 DNNFGFSNAGDTNTGFWNAADRNTGFGNSGNANTGFGNSGFQNTGFGNAGFQNTGSG 455
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 91/246 (36%), Gaps = 12/246 (4%)
Query: 3 PIVAPISTKGLRNCNTGG------LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 56
P I G+ N G +G N +G G N G +G N G +G N
Sbjct: 191 PAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANL 250
Query: 57 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
+G G N G G N +G G N +G G N G G RN G G N
Sbjct: 251 GSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNDGDRNLGFGNFGNTNV 310
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
+G LG N +G G N G LG N G G N G GL N G+G N
Sbjct: 311 GSGNLGDFNLGSGNNGFSNVGFGNLGDNNLGFGNSGNNNI---GFGLTGNNMIGIGALNS 367
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 233
TG G N +G N + +G N G N NTG + NTG
Sbjct: 368 GTGNFGFGNSGNNNIGFFNSGSNNVGFFNSGDNNFGFSNAGDTNTGFWNAADRNTGFGNS 427
Query: 234 RNCNTG 239
N NTG
Sbjct: 428 GNANTG 433
>gi|294996835|ref|ZP_06802526.1| PPE family protein [Mycobacterium tuberculosis 210]
Length = 513
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 296
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 297 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 354
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 355 NTGVGNTGNVNTGGF 369
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 183 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 240
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 241 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 300
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 301 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 360
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 361 TGNVNTGGF 369
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 184 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 241
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 242 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 297
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 298 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 355
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 356 TGVGNTGNVNTGGF 369
>gi|385994898|ref|YP_005913196.1| putative PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339294852|gb|AEJ46963.1| putative PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 483
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
NTG NTG N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGN 394
Query: 233 LRNCNTGGL 241
N NTGG
Sbjct: 395 TGNVNTGGF 403
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
>gi|330801053|ref|XP_003288545.1| hypothetical protein DICPUDRAFT_98057 [Dictyostelium purpureum]
gi|325081395|gb|EGC34912.1| hypothetical protein DICPUDRAFT_98057 [Dictyostelium purpureum]
Length = 445
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 55/158 (34%), Gaps = 5/158 (3%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
GL L + L LRN N + N L N L + G LR N
Sbjct: 284 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGADLSGASLRGTNLT 343
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G L +CN G + L N N L N G LR CN L NCN
Sbjct: 344 GANLESCNLKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRVCNFKNANLENCN-- 401
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
R + G L +CN G L N G+ LR N
Sbjct: 402 ---FRGADLAGANLEDCNLRGANLHKANLIGVNLRGAN 436
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 55/158 (34%), Gaps = 5/158 (3%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
GL L + L LRN N + N L N L + G LR N
Sbjct: 284 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGADLSGASLRGTNLT 343
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G L +CN G + L N N L N G LR CN L NCN
Sbjct: 344 GANLESCNLKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRVCNFKNANLENCN-- 401
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
R + G L +CN G L N G+ LR N
Sbjct: 402 ---FRGADLAGANLEDCNLRGANLHKANLIGVNLRGAN 436
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 55/158 (34%), Gaps = 5/158 (3%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 99
GL L + L LRN N + N L N L + G LR N
Sbjct: 284 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGADLSGASLRGTNLT 343
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
G L +CN G + L N N L N G LR CN L NCN
Sbjct: 344 GANLESCNLKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRVCNFKNANLENCN-- 401
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
R + G L +CN G L N G+ LR N
Sbjct: 402 ---FRGADLAGANLEDCNLRGANLHKANLIGVNLRGAN 436
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 55/158 (34%), Gaps = 5/158 (3%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
GL L + L LRN N + N L N L + G LR N
Sbjct: 284 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGADLSGASLRGTNLT 343
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
G L +CN G + L N N L N G LR CN L NCN
Sbjct: 344 GANLESCNLKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRVCNFKNANLENCN-- 401
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
R + G L +CN G L N G+ LR N
Sbjct: 402 ---FRGADLAGANLEDCNLRGANLHKANLIGVNLRGAN 436
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 55/158 (34%), Gaps = 5/158 (3%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
GL L + L LRN N + N L N L + G LR N
Sbjct: 284 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGADLSGASLRGTNLT 343
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G L +CN G + L N N L N G LR CN L NCN
Sbjct: 344 GANLESCNLKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRVCNFKNANLENCN-- 401
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
R + G L +CN G L N G+ LR N
Sbjct: 402 ---FRGADLAGANLEDCNLRGANLHKANLIGVNLRGAN 436
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 55/158 (34%), Gaps = 5/158 (3%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL L + L LRN N + N L N L + G LR N
Sbjct: 284 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGADLSGASLRGTNLT 343
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
G L +CN G + L N N L N G LR CN L NCN
Sbjct: 344 GANLESCNLKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRVCNFKNANLENCN-- 401
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
R + G L +CN G L N G+ LR N
Sbjct: 402 ---FRGADLAGANLEDCNLRGANLHKANLIGVNLRGAN 436
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 55/158 (34%), Gaps = 5/158 (3%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
GL L + L LRN N + N L N L + G LR N
Sbjct: 284 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGADLSGASLRGTNLT 343
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
G L +CN G + L N N L N G LR CN L NCN
Sbjct: 344 GANLESCNLKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRVCNFKNANLENCN-- 401
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
R + G L +CN G L N G+ LR N
Sbjct: 402 ---FRGADLAGANLEDCNLRGANLHKANLIGVNLRGAN 436
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 52/150 (34%), Gaps = 5/150 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S LRN N + N L N L + G LR N G L +CN
Sbjct: 292 LSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGADLSGASLRGTNLTGANLESCN 351
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G + L N N L N G LR CN L NCN R +
Sbjct: 352 LKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRVCNFKNANLENCN-----FRGAD 406
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
G L +CN G L N G+ LR N
Sbjct: 407 LAGANLEDCNLRGANLHKANLIGVNLRGAN 436
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A +S LR N G L +CN G + L N N L N G LR
Sbjct: 330 ADLSGASLRGTNLTGANLESCNLKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRV 389
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
CN L NCN R + G L +CN G L N G+ LR N
Sbjct: 390 CNFKNANLENCN-----FRGADLAGANLEDCNLRGANLHKANLIGVNLRGAN 436
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 41/121 (33%)
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
GL L + L LRN N + N L N L + G LR N
Sbjct: 284 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGADLSGASLRGTNLT 343
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G L +CN G + L N N L N G LR CN L NCN
Sbjct: 344 GANLESCNLKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRVCNFKNANLENCNFR 403
Query: 240 G 240
G
Sbjct: 404 G 404
>gi|220917215|ref|YP_002492519.1| hypothetical protein A2cp1_2113 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955069|gb|ACL65453.1| Repeat of unknown function XGLTT [Anaeromyxobacter dehalogenans
2CP-1]
Length = 462
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 84/206 (40%), Gaps = 10/206 (4%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
NT G+ NT G+ NT GL NT G+ NT G+ NT G+
Sbjct: 34 INTNGINTNGINTNGI-----NTNGLVGNGINTNGI-----NTNGINTNGINTNGINTNG 83
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
NT GL NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 84 INTNGLVGNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 143
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 144 INTNGINTNGINTNGIDTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 203
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGL 231
NT G+ NT G+ NT G+
Sbjct: 204 INTNGINTNGINTNGINTNGINTNGI 229
>gi|433629999|ref|YP_007263627.1| Conserved protein of unknown function, uncharacterized PPE family
protein PPE54 (fragment) [Mycobacterium canettii CIPT
140070010]
gi|432161592|emb|CCK58937.1| Conserved protein of unknown function, uncharacterized PPE family
protein PPE54 (fragment) [Mycobacterium canettii CIPT
140070010]
Length = 553
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 85/212 (40%), Gaps = 13/212 (6%)
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
N +G LG N +G LG N G LG N G G N G GL N G G
Sbjct: 93 FNFGSGNLGGFNVGSGNLGGYNVGPGNLGSFNIGFGNAGDYNLGLGNTGLNNVGFGNTGT 152
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
N G+GL G G N + +GL N G +G N TG G+ N + G+
Sbjct: 153 NNI---GIGLTGTGQIGFGAWNSGSANVGLFNSGAGNIGFFNSGTGNFGIGNSGSFNTGI 209
Query: 174 RNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N + G+ N NTG + N+GG NTG + NTG + NTG
Sbjct: 210 ANTGSANTGVFNSGLVNTGWGNAGSYNSGGFNTGAFNTGSFNPGDVNTGWFNTGDINTGV 269
Query: 231 LGLRNCNTGGLIVPKSKRGAQEN--ASRSENE 260
+ NTG I G Q N R +N+
Sbjct: 270 GNTGDINTGAFI-----SGEQSNGLFWRGDNQ 296
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 85/211 (40%), Gaps = 7/211 (3%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
N +G LG N +G LG N G LG N G G N G GL N G G
Sbjct: 93 FNFGSGNLGGFNVGSGNLGGYNVGPGNLGSFNIGFGNAGDYNLGLGNTGLNNVGFGNTGT 152
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
N G+GL G G N + +GL N G +G N TG G+ N + G+
Sbjct: 153 NNI---GIGLTGTGQIGFGAWNSGSANVGLFNSGAGNIGFFNSGTGNFGIGNSGSFNTGI 209
Query: 154 RNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
N + G+ N NTG + N+GG NTG + NTG + NTG
Sbjct: 210 ANTGSANTGVFNSGLVNTGWGNAGSYNSGGFNTGAFNTGSFNPGDVNTGWFNTGDINTGV 269
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NTG + + GL R N G +
Sbjct: 270 GNTGDINTGAF-ISGEQSNGLFWRGDNQGQI 299
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 66/164 (40%), Gaps = 7/164 (4%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL N G G N G+GL G G N + +GL N G +G N TG
Sbjct: 140 TGLNNVGFGNTGTNNI---GIGLTGTGQIGFGAWNSGSANVGLFNSGAGNIGFFNSGTGN 196
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G+ N + G+ N + G+ N NTG + N+GG NTG + N
Sbjct: 197 FGIGNSGSFNTGIANTGSANTGVFNSGLVNTGWGNAGSYNSGGFNTGAFNTGSFNPGDVN 256
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
TG + NTG + NTG + + GL R N G +
Sbjct: 257 TGWFNTGDINTGVGNTGDINTGAF-ISGEQSNGLFWRGDNQGQI 299
>gi|289443216|ref|ZP_06432960.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289416135|gb|EFD13375.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 1152
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 222 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 276
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 277 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 336
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 337 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 396
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 397 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 428
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 222 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 276
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 277 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 336
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 337 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 396
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 397 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 428
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 222 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 276
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 277 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 336
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 337 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 390
>gi|424804093|ref|ZP_18229524.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|326903369|gb|EGE50302.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length = 1129
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|15841218|ref|NP_336255.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13881441|gb|AAK46069.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
Length = 1105
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|340626927|ref|YP_004745379.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
gi|340005117|emb|CCC44266.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
Length = 2222
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 103/239 (43%), Gaps = 21/239 (8%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 1249 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 1300
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 1301 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1360
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLG-LRNCNTGGLGL 183
G G N +G +G N G +G N G +G+ N NTG LG + N NTG
Sbjct: 1361 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTG-LGNVGNANTGLFNT 1419
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1420 GNVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1478
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1316 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1375
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLG-LRNCNTGGLGLRNCNTGGLGLRNCNT 118
N G +G N G +G+ N NT GLG + N NTG N NTG + NT
Sbjct: 1376 FFNSGNGNIGFFNSGNGNVGIGNSGNYNT-GLGNVGNANTGLFNTGNVNTGIGNAGSYNT 1434
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
G + NTG L N NTG L L + NTG + + NTG L
Sbjct: 1435 GSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1477
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 91/204 (44%), Gaps = 18/204 (8%)
Query: 9 STKG-LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRN 65
S+KG L N + LGL N G +G N G L L N GG GL N + +GL N
Sbjct: 196 SSKGVLANLS---LGLANSGFGHMGAANL--GILNLGGLNPGGNNFGLGNVGSNNVGLGN 250
Query: 66 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
G +G N G G GL N G G N TG +GL N TG +G+ N TG G+
Sbjct: 251 TGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGI 310
Query: 124 ----RNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+ NTG NTG G+ N G G N NTG L + NTG + N
Sbjct: 311 GNSGASYNTGIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSN 368
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGL 201
TG N NTG N NTGG
Sbjct: 369 TGFFNPGNLNTGVGNTGNVNTGGF 392
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGHMGAANL--GILNLGGLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL----RNCNTGGLG 142
G G GL N G G N TG +GL N TG +G+ N TG G+ + NTG
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGASYNTGIGN 323
Query: 143 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 201 LGLRNCNTGGL 211
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGHMGAANL--GILNLGGLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL----RNCNTGGLG 152
G G GL N G G N TG +GL N TG +G+ N TG G+ + NTG
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGASYNTGIGN 323
Query: 153 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 211 LGLRNCNTGGL 221
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
LGL N G +G N G L L N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGHMGAANL--GILNLGGLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 109 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL----RNCNTGGLG 162
G G GL N G G N TG +GL N TG +G+ N TG G+ + NTG
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGASYNTGIGN 323
Query: 163 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 220
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 221 LGLRNCNTGGL 231
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGHMGAANL--GILNLGGLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL----RNCNTGGLG 172
G G GL N G G N TG +GL N TG +G+ N TG G+ + NTG
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGASYNTGIGN 323
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
>gi|289750313|ref|ZP_06509691.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289690900|gb|EFD58329.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 1053
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 123 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 177
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 178 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 237
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 238 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 297
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 298 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 329
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 123 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 177
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 178 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 237
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 238 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 297
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 298 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 329
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 123 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 177
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 178 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 237
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 238 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 291
>gi|308402956|ref|ZP_07493652.2| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu012]
gi|308365845|gb|EFP54696.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
Length = 745
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 79 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 197 NTGGLGLRNCNTGGL 211
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 330
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 331 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 388
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 389 NTGVGNTGNVNTGGF 403
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 217 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 274
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 275 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 334
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 335 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 392
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 393 GNTGNVNTGGF 403
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
GL N G +G N G L L + N GG GL N + +GL N G +G N G
Sbjct: 218 GLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNG 275
Query: 70 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 276 NIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTG 331
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G G N G+ N G G N NTG L + NTG + NTG N N
Sbjct: 332 IGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLN 389
Query: 188 TGGLGLRNCNTGGL 201
TG N NTGG
Sbjct: 390 TGVGNTGNVNTGGF 403
>gi|440682215|ref|YP_007157010.1| endoribonuclease L-PSP [Anabaena cylindrica PCC 7122]
gi|428679334|gb|AFZ58100.1| endoribonuclease L-PSP [Anabaena cylindrica PCC 7122]
Length = 440
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 76/233 (32%), Gaps = 18/233 (7%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
L N N L N+ + L + G LR N N N L N N
Sbjct: 66 SLTNANLSEL----VNSSSINLTWADLSGANLREANISSANFSNAN-----LDNANLSKA 116
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
L + N L N N L+ N L + N L + N L +C+
Sbjct: 117 NLDSTNFSNAHLDNANLRDATLQYTNFTEASLIDANLARTNLNSANFSEANLTDCDLS-- 174
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
+ N + L+N N +R G+ L + G+ + G L N
Sbjct: 175 --QAINLTKITLKNTNFQRAKIR-----GVNLSQKDLSGMNFAEADLGAANLNGVNFQKA 227
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
L+ N G L+ N L N N L N G +N + G I+P
Sbjct: 228 SLKGINLGKAELQKVNLMRANLDNANLKKADLTGANIYGATFKNADLTGAIMP 280
>gi|339631806|ref|YP_004723448.1| PPE family protein [Mycobacterium africanum GM041182]
gi|339331162|emb|CCC26842.1| PPE family protein [Mycobacterium africanum GM041182]
Length = 1255
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|433634807|ref|YP_007268434.1| Conserved protein of unknown function, probable ancestor of PPE
family protein PPE24 (fragment) [Mycobacterium canettii
CIPT 140070017]
gi|432166400|emb|CCK63895.1| Conserved protein of unknown function, probable ancestor of PPE
family protein PPE24 (fragment) [Mycobacterium canettii
CIPT 140070017]
Length = 757
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 89/204 (43%), Gaps = 10/204 (4%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N +G G N + LG N G LG N G LG N NTG N G
Sbjct: 234 LGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGAGNLG--NLNTG---FANTGLGN 288
Query: 91 LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 146
G N N G+GL N G+G N TG GL N +G +G N G G+ N
Sbjct: 289 FGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNAGN 348
Query: 147 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
NTGG + NTG + NTG L + N NTG L + N G + NTG +
Sbjct: 349 FNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGAFNTGS 408
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTG 229
NTG L N NTG + + N G
Sbjct: 409 VNTGFLNAGNINTGVFNIGHMNNG 432
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 86/199 (43%), Gaps = 20/199 (10%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
LG N +G G N + LG N G LG N G LG N NTG N G
Sbjct: 234 LGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGAGNLG--NLNTG---FANTGLGN 288
Query: 111 LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 166
G N N G+GL N G+G N TG GL N +G +G N G G+ N
Sbjct: 289 FGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNAGN 348
Query: 167 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-----NTGG 220
NTGG + NTG + NTG L + N NTG L NTG + + NTG
Sbjct: 349 FNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSL-----NTGSYNMGDFNPGSSNTGA 403
Query: 221 LGLRNCNTGGLGLRNCNTG 239
+ NTG L N NTG
Sbjct: 404 FNTGSVNTGFLNAGNINTG 422
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
LG N +G G N + LG N G LG N G LG N NTG N G
Sbjct: 234 LGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGAGNLG--NLNTG---FANTGLGN 288
Query: 141 LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 196
G N N G+GL N G+G N TG GL N +G +G N G G+ N
Sbjct: 289 FGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNAGN 348
Query: 197 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 349 FNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>gi|66802546|ref|XP_635145.1| BTB/POZ domain-containing protein [Dictyostelium discoideum AX4]
gi|60463464|gb|EAL61649.1| BTB/POZ domain-containing protein [Dictyostelium discoideum AX4]
Length = 488
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 53/158 (33%), Gaps = 5/158 (3%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
GL L + L LRN N + N L N L N G LR N
Sbjct: 327 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGANLTGASLRGSNLT 386
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G L +C G + L N N L N G LR CN L NCN
Sbjct: 387 GANLEDCILKGANFEDRGGQRATLENVNFKNASLEEANFSGANLRVCNFKSANLENCN-- 444
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
R + G L CN G L N G+ L+ N
Sbjct: 445 ---FRGADLAGANLEKCNFRGANLHKANLIGVNLKGAN 479
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 53/158 (33%), Gaps = 5/158 (3%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
GL L + L LRN N + N L N L N G LR N
Sbjct: 327 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGANLTGASLRGSNLT 386
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G L +C G + L N N L N G LR CN L NCN
Sbjct: 387 GANLEDCILKGANFEDRGGQRATLENVNFKNASLEEANFSGANLRVCNFKSANLENCN-- 444
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
R + G L CN G L N G+ L+ N
Sbjct: 445 ---FRGADLAGANLEKCNFRGANLHKANLIGVNLKGAN 479
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 53/158 (33%), Gaps = 5/158 (3%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 99
GL L + L LRN N + N L N L N G LR N
Sbjct: 327 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGANLTGASLRGSNLT 386
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
G L +C G + L N N L N G LR CN L NCN
Sbjct: 387 GANLEDCILKGANFEDRGGQRATLENVNFKNASLEEANFSGANLRVCNFKSANLENCN-- 444
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
R + G L CN G L N G+ L+ N
Sbjct: 445 ---FRGADLAGANLEKCNFRGANLHKANLIGVNLKGAN 479
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 53/158 (33%), Gaps = 5/158 (3%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
GL L + L LRN N + N L N L N G LR N
Sbjct: 327 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGANLTGASLRGSNLT 386
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
G L +C G + L N N L N G LR CN L NCN
Sbjct: 387 GANLEDCILKGANFEDRGGQRATLENVNFKNASLEEANFSGANLRVCNFKSANLENCN-- 444
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
R + G L CN G L N G+ L+ N
Sbjct: 445 ---FRGADLAGANLEKCNFRGANLHKANLIGVNLKGAN 479
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 53/158 (33%), Gaps = 5/158 (3%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
GL L + L LRN N + N L N L N G LR N
Sbjct: 327 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGANLTGASLRGSNLT 386
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G L +C G + L N N L N G LR CN L NCN
Sbjct: 387 GANLEDCILKGANFEDRGGQRATLENVNFKNASLEEANFSGANLRVCNFKSANLENCN-- 444
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
R + G L CN G L N G+ L+ N
Sbjct: 445 ---FRGADLAGANLEKCNFRGANLHKANLIGVNLKGAN 479
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 53/158 (33%), Gaps = 5/158 (3%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL L + L LRN N + N L N L N G LR N
Sbjct: 327 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGANLTGASLRGSNLT 386
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
G L +C G + L N N L N G LR CN L NCN
Sbjct: 387 GANLEDCILKGANFEDRGGQRATLENVNFKNASLEEANFSGANLRVCNFKSANLENCN-- 444
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
R + G L CN G L N G+ L+ N
Sbjct: 445 ---FRGADLAGANLEKCNFRGANLHKANLIGVNLKGAN 479
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 53/158 (33%), Gaps = 5/158 (3%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
GL L + L LRN N + N L N L N G LR N
Sbjct: 327 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGANLTGASLRGSNLT 386
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
G L +C G + L N N L N G LR CN L NCN
Sbjct: 387 GANLEDCILKGANFEDRGGQRATLENVNFKNASLEEANFSGANLRVCNFKSANLENCN-- 444
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
R + G L CN G L N G+ L+ N
Sbjct: 445 ---FRGADLAGANLEKCNFRGANLHKANLIGVNLKGAN 479
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 50/150 (33%), Gaps = 5/150 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S LRN N + N L N L N G LR N G L +C
Sbjct: 335 LSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGANLTGASLRGSNLTGANLEDCI 394
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G + L N N L N G LR CN L NCN R +
Sbjct: 395 LKGANFEDRGGQRATLENVNFKNASLEEANFSGANLRVCNFKSANLENCN-----FRGAD 449
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
G L CN G L N G+ L+ N
Sbjct: 450 LAGANLEKCNFRGANLHKANLIGVNLKGAN 479
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 40/121 (33%)
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
GL L + L LRN N + N L N L N G LR N
Sbjct: 327 GLNLAGVDLSKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGANLTGASLRGSNLT 386
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G L +C G + L N N L N G LR CN L NCN
Sbjct: 387 GANLEDCILKGANFEDRGGQRATLENVNFKNASLEEANFSGANLRVCNFKSANLENCNFR 446
Query: 240 G 240
G
Sbjct: 447 G 447
>gi|306786226|ref|ZP_07424548.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308329162|gb|EFP18013.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 575
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
Query: 108 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ N
Sbjct: 3 VGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFN 62
Query: 166 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
+ G+ N GL N NTG + + NTG NTGG + NTG L
Sbjct: 63 SGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLN 122
Query: 223 LRNCNTGGLGLRNCNTGGLI 242
+ NTG + NTG I
Sbjct: 123 TGDINTGVANSGDVNTGAFI 142
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 18 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ N
Sbjct: 3 VGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFN 62
Query: 76 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+ G+ N GL N NTG + + NTG NTGG + NTG L
Sbjct: 63 SGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLN 122
Query: 133 LRNCNTGGLGLRNCNTGGL 151
+ NTG + NTG
Sbjct: 123 TGDINTGVANSGDVNTGAF 141
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 28 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ N
Sbjct: 3 VGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFN 62
Query: 86 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
+ G+ N GL N NTG + + NTG NTGG + NTG L
Sbjct: 63 SGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLN 122
Query: 143 LRNCNTGGLGLRNCNTGGL 161
+ NTG + NTG
Sbjct: 123 TGDINTGVANSGDVNTGAF 141
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 38 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 95
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ N
Sbjct: 3 VGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFN 62
Query: 96 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
+ G+ N GL N NTG + + NTG NTGG + NTG L
Sbjct: 63 SGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLN 122
Query: 153 LRNCNTGGLGLRNCNTGGL 171
+ NTG + NTG
Sbjct: 123 TGDINTGVANSGDVNTGAF 141
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 48 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ N
Sbjct: 3 VGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFN 62
Query: 106 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
+ G+ N GL N NTG + + NTG NTGG + NTG L
Sbjct: 63 SGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLN 122
Query: 163 LRNCNTGGLGLRNCNTGGL 181
+ NTG + NTG
Sbjct: 123 TGDINTGVANSGDVNTGAF 141
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 58 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ N
Sbjct: 3 VGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFN 62
Query: 116 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
+ G+ N GL N NTG + + NTG NTGG + NTG L
Sbjct: 63 SGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLN 122
Query: 173 LRNCNTGGLGLRNCNTGGL 191
+ NTG + NTG
Sbjct: 123 TGDINTGVANSGDVNTGAF 141
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 68 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ N
Sbjct: 3 VGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFN 62
Query: 126 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
+ G+ N GL N NTG + + NTG NTGG + NTG L
Sbjct: 63 SGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLN 122
Query: 183 LRNCNTGGLGLRNCNTGGL 201
+ NTG + NTG
Sbjct: 123 TGDINTGVANSGDVNTGAF 141
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 78 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ N
Sbjct: 3 VGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFN 62
Query: 136 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
+ G+ N GL N NTG + + NTG NTGG + NTG L
Sbjct: 63 SGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLN 122
Query: 193 LRNCNTGGLGLRNCNTGGL 211
+ NTG + NTG
Sbjct: 123 TGDINTGVANSGDVNTGAF 141
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 88 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ N
Sbjct: 3 VGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFN 62
Query: 146 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 202
+ G+ N GL N NTG + + NTG NTGG + NTG L
Sbjct: 63 SGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLN 122
Query: 203 LRNCNTGGLGLRNCNTGGL 221
+ NTG + NTG
Sbjct: 123 TGDINTGVANSGDVNTGAF 141
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 98 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ N
Sbjct: 3 VGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFN 62
Query: 156 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
+ G+ N GL N NTG + + NTG NTGG + NTG L
Sbjct: 63 SGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLN 122
Query: 213 LRNCNTGGLGLRNCNTGGL 231
+ NTG + NTG
Sbjct: 123 TGDINTGVANSGDVNTGAF 141
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 12 GLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N +G G+GL N G G N +G +GL N TG +G N TG G+ N +
Sbjct: 7 GFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSY 66
Query: 70 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G+ N GL N NTG + + NTG NTGG + NTG L +
Sbjct: 67 NTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDI 126
Query: 127 NTGGLGLRNCNTGGL 141
NTG + NTG
Sbjct: 127 NTGVANSGDVNTGAF 141
>gi|433626228|ref|YP_007259857.1| Conserved protein of unknown function, PPE family, PPE16
[Mycobacterium canettii CIPT 140060008]
gi|432153834|emb|CCK51059.1| Conserved protein of unknown function, PPE family, PPE16
[Mycobacterium canettii CIPT 140060008]
Length = 618
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 85/241 (35%), Gaps = 15/241 (6%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNT 78
G N + +G N LG+ N LG+ N N G+GL N G+G N
Sbjct: 306 FGTANAGSFNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGI 365
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
G LG N +GL N +G N G N G N G N +
Sbjct: 366 GNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGS 425
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
G G N G N +G+ N NTG NTG L + NTG +
Sbjct: 426 GNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGD 485
Query: 196 CNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
NTGG + NTG G N TG G N G +N NTG +
Sbjct: 486 INTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGH 545
Query: 246 S 246
S
Sbjct: 546 S 546
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 82/224 (36%), Gaps = 5/224 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N LG+ N
Sbjct: 276 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGFANLGNNNLGIANLGNNN 335
Query: 81 LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 336 LGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGD 395
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 196
G N G N G N +G G N G N +G+ N
Sbjct: 396 SNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGA 455
Query: 197 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 456 YNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 499
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 78/216 (36%), Gaps = 5/216 (2%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
LG N G GL N G G N + G N + +G N LG+ N
Sbjct: 276 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGFANLGNNNLGIANLGNNN 335
Query: 91 LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 336 LGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGD 395
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 206
G N G N G N +G G N G N +G+ N
Sbjct: 396 SNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGA 455
Query: 207 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG NTG L + NTG + NTGG
Sbjct: 456 YNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGF 491
>gi|433634966|ref|YP_007268593.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140070017]
gi|432166559|emb|CCK64056.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140070017]
Length = 2172
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N G N
Sbjct: 1199 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGNNNFGFGN 1250
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 1251 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1310
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1311 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1370
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG + NTG L N NTG L L + NTG + + NTG LI
Sbjct: 1371 NVNTGIGNAGSYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALI 1428
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 9 STKG-LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRN 65
S+KG L N + LGL N G +G N G L L + N GG GL N + +GL N
Sbjct: 196 SSKGVLANLS---LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGN 250
Query: 66 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
G +G N G G GL N G G N TG +GL N TG +G+ N TG G+
Sbjct: 251 TGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGI 310
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
N T N G G N G+ N G G N NTG L + NTG
Sbjct: 311 GNSGTS----YNTGIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNT 364
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTG N NTG N NTGG
Sbjct: 365 GSSNTGFFNPGNLNTGVGNTGNVNTGGF 392
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 74/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1266 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1325
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1326 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1385
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ NTG L N NTG L L + NTG + + NTG L
Sbjct: 1386 SYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGAL 1427
>gi|289752057|ref|ZP_06511435.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289692644|gb|EFD60073.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 235
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 83/204 (40%), Gaps = 10/204 (4%)
Query: 5 VAPIST--KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
V P++ GL N + G N LG N LG N G LG N G +G
Sbjct: 29 VNPVTVLNIGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVG 88
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 120
+ N GL G +GL N GL N G +G N T G+GL G
Sbjct: 89 VGNS---GLTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGFANTGTNNLGIGLTGDYQTG 145
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+G N G LGL N G +G N TG GL N + G+ N TG GL N
Sbjct: 146 IGGLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFT 205
Query: 181 LGLRNC---NTGGLGLRNCNTGGL 201
GL N NTG + + NTGG
Sbjct: 206 TGLANAGSYNTGSFNVGDTNTGGF 229
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 80/196 (40%), Gaps = 8/196 (4%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 90
+GL N + G N LG N LG N G LG N G +G+ N G
Sbjct: 37 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNS---G 93
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 148
L G +GL N GL N G +G N T G+GL G+G N
Sbjct: 94 LTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGA 153
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 206
G LGL N G +G N TG GL N + G+ N TG GL N GL N
Sbjct: 154 GNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGS 213
Query: 207 -NTGGLGLRNCNTGGL 221
NTG + + NTGG
Sbjct: 214 YNTGSFNVGDTNTGGF 229
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 80/196 (40%), Gaps = 8/196 (4%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
+GL N + G N LG N LG N G LG N G +G+ N G
Sbjct: 37 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNS---G 93
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 158
L G +GL N GL N G +G N T G+GL G+G N
Sbjct: 94 LTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGA 153
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 216
G LGL N G +G N TG GL N + G+ N TG GL N GL N
Sbjct: 154 GNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGS 213
Query: 217 -NTGGLGLRNCNTGGL 231
NTG + + NTGG
Sbjct: 214 YNTGSFNVGDTNTGGF 229
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 80/193 (41%), Gaps = 12/193 (6%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-TG 119
+GL N + G N LG N LG N G LG N G +G+ N T
Sbjct: 37 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNSGLTA 96
Query: 120 GL-GLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 171
G+ GL N G GL N G +G N T G+GL G+G N G L
Sbjct: 97 GVPGLGNVGLGNAGGNNWGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGAGNL 156
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 228
GL N G +G N TG GL N + G+ N TG GL N GL N NT
Sbjct: 157 GLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNT 216
Query: 229 GGLGLRNCNTGGL 241
G + + NTGG
Sbjct: 217 GSFNVGDTNTGGF 229
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 76/192 (39%), Gaps = 7/192 (3%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
+GL N + G N LG N LG N G LG N G +G+ N G
Sbjct: 37 IGLANVGSHNAGFGNVGEVNLGAANLGAHNLGFGNIGAGNLGFGNIGHGNVGVGNS---G 93
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 188
L G +GL N GL N G +G N T G+GL G+G N
Sbjct: 94 LTAGVPGLGNVGLGNAGGNNWGLANVGVGNIGFANTGTNNLGIGLTGDYQTGIGGLNSGA 153
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
G LGL N G +G N TG GL N + G+ N TG GL N GG +
Sbjct: 154 GNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA--GGFTTGLANA 211
Query: 249 GAQENASRSENE 260
G+ S + +
Sbjct: 212 GSYNTGSFNVGD 223
>gi|433641890|ref|YP_007287649.1| Conserved protein of unknown function, probable ancestor of PPE
family protein PPE24 (fragment) [Mycobacterium canettii
CIPT 140070008]
gi|432158438|emb|CCK55732.1| Conserved protein of unknown function, probable ancestor of PPE
family protein PPE24 (fragment) [Mycobacterium canettii
CIPT 140070008]
Length = 1258
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
>gi|289759504|ref|ZP_06518882.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289715068|gb|EFD79080.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 586
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 176
G+G N TG +GL N TG +G N TG G+ N G+ N T GL N
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
NTG + + + NTG + NTGG NTG L N NTG N NTG N
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNF 122
Query: 237 NTGGLIV 243
N G L V
Sbjct: 123 NNGVLWV 129
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 76
G+G N TG +GL N TG +G N TG G+ N G+ N T GL N
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
NTG + + + NTG + NTGG NTG L N NTG N NTG N
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNF 122
Query: 137 NTGGLGLRNCN 147
N G L + +
Sbjct: 123 NNGVLWVGDYQ 133
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 86
G+G N TG +GL N TG +G N TG G+ N G+ N T GL N
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
NTG + + + NTG + NTGG NTG L N NTG N NTG N
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNF 122
Query: 147 NTGGLGLRNCN 157
N G L + +
Sbjct: 123 NNGVLWVGDYQ 133
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 96
G+G N TG +GL N TG +G N TG G+ N G+ N T GL N
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
NTG + + + NTG + NTGG NTG L N NTG N NTG N
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNF 122
Query: 157 NTGGLGLRNCN 167
N G L + +
Sbjct: 123 NNGVLWVGDYQ 133
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 106
G+G N TG +GL N TG +G N TG G+ N G+ N T GL N
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
NTG + + + NTG + NTGG NTG L N NTG N NTG N
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNF 122
Query: 167 NTGGLGLRNCN 177
N G L + +
Sbjct: 123 NNGVLWVGDYQ 133
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 116
G+G N TG +GL N TG +G N TG G+ N G+ N T GL N
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
NTG + + + NTG + NTGG NTG L N NTG N NTG N
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNF 122
Query: 177 NTGGLGLRNCN 187
N G L + +
Sbjct: 123 NNGVLWVGDYQ 133
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 126
G+G N TG +GL N TG +G N TG G+ N G+ N T GL N
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTG + + + NTG + NTGG NTG L N NTG N NTG N
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNF 122
Query: 187 NTGGLGLRNCN 197
N G L + +
Sbjct: 123 NNGVLWVGDYQ 133
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 136
G+G N TG +GL N TG +G N TG G+ N G+ N T GL N
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
NTG + + + NTG + NTGG NTG L N NTG N NTG N
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNF 122
Query: 197 NTGGLGLRNCN 207
N G L + +
Sbjct: 123 NNGVLWVGDYQ 133
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 146
G+G N TG +GL N TG +G N TG G+ N G+ N T GL N
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
NTG + + + NTG + NTGG NTG L N NTG N NTG N
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNF 122
Query: 207 NTGGLGLRNCN 217
N G L + +
Sbjct: 123 NNGVLWVGDYQ 133
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 156
G+G N TG +GL N TG +G N TG G+ N G+ N T GL N
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
NTG + + + NTG + NTGG NTG L N NTG N NTG N
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNF 122
Query: 217 NTGGLGLRNCN 227
N G L + +
Sbjct: 123 NNGVLWVGDYQ 133
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 166
G+G N TG +GL N TG +G N TG G+ N G+ N T GL N
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 226
NTG + + + NTG + NTGG NTG L N NTG N NTG N
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNF 122
Query: 227 NTGGLGLRNCN 237
N G L + +
Sbjct: 123 NNGVLWVGDYQ 133
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGL 71
N TG +GL N TG +G N TG G+ N G+ N T GL N NTG +
Sbjct: 8 NSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVV 67
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
+ + NTG + NTGG NTG L N NTG N NTG N N G L
Sbjct: 68 NVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVL 127
Query: 132 GLRNCN 137
+ +
Sbjct: 128 WVGDYQ 133
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 68
GL N TG +G N TG G+ N G+ N T GL N NTG + + + NT
Sbjct: 15 GLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNT 74
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G + NTGG NTG L N NTG N NTG N N G L + +
Sbjct: 75 GSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFISGNFNNGVLWVGDYQ 133
>gi|183980666|ref|YP_001848957.1| PPE family protein [Mycobacterium marinum M]
gi|183173992|gb|ACC39102.1| PPE family protein [Mycobacterium marinum M]
Length = 2403
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 92/233 (39%), Gaps = 11/233 (4%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N G + N GG+ N G L N G LG N G LG N
Sbjct: 1937 ANLGVLNLGAANVGDYNVGTANVGGINFGGANIGDL---NFGAGNLGSTNFGFGNLGSNN 1993
Query: 76 CNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL 131
G G+ L N N G N + G N G +G N G G+GL G
Sbjct: 1994 FGFGNSGVSLANGNHN-FGFGNTGSNNFGFGNTGDGNIGFGNTGDGNIGIGLNGDGLRGF 2052
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
N T +GL N TG +G+ N TG G+ N G+ N G+ N
Sbjct: 2053 EALNSGTDNVGLFNSGTGNVGIGNSGTGNWGIGNSGNYNTGVGNTGAANTGMFNSGIANT 2112
Query: 192 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTG L + NTG NTG + + NTG L + NTGG
Sbjct: 2113 GVANAGSYNTGNLNAGDINTGSFNTGVSNTGYFNVGDTNTGIANLGDINTGGF 2165
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 93/234 (39%), Gaps = 11/234 (4%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGL 73
N G + N GG+ N G L N G LG N G LG N G G+ L
Sbjct: 1947 ANVGDYNVGTANVGGINFGGANIGDL---NFGAGNLGSTNFGFGNLGSNNFGFGNSGVSL 2003
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGL 131
N N G N + G N G +G N G G+GL G N T +
Sbjct: 2004 ANGNHN-FGFGNTGSNNFGFGNTGDGNIGFGNTGDGNIGIGLNGDGLRGFEALNSGTDNV 2062
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NT 188
GL N TG +G+ N TG G+ N G+ N G+ N G+ N NT
Sbjct: 2063 GLFNSGTGNVGIGNSGTGNWGIGNSGNYNTGVGNTGAANTGMFNSGIANTGVANAGSYNT 2122
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G L + NTG NTG + + NTG L + NTGG + N G L+
Sbjct: 2123 GNLNAGDINTGSFNTGVSNTGYFNVGDTNTGIANLGDINTGGFNSGSMNNGFLL 2176
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 67/164 (40%), Gaps = 12/164 (7%)
Query: 116 CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG + NTG G+GL G G N +G +GL N T +G N TG
Sbjct: 298 ANTGSFNVGFGNTGSNNIGIGLSGDGKIGFGSLNSGSGNIGLFNSGTNNIGFFNSGTGNF 357
Query: 172 GLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 228
G+ N + G N +TG N NTG N NTG N NTGG N NT
Sbjct: 358 GVLNSGSYNTGFGNSGEASTGVFNPGNANTGWANTGNHNTGSFNAGNTNTGGFNPGNLNT 417
Query: 229 GGLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIKFTPNL 272
G + +TG I G+ N +++ L+ I N
Sbjct: 418 GWANTGDVDTGAFI-----SGSYSNGLFWQDDYRLLGIDLKINF 456
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 73/157 (46%), Gaps = 5/157 (3%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
+G N +G N G +G N G G+GL G G N +G +GL N T
Sbjct: 718 IGFGNTGDNNIGFGNTGNGNIGFGNTGNGNIGIGLNGDGLQGFGGWNSGSGNIGLFNSGT 777
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
+G+ N TG G+ N + G+ N NTG + N NTG N N+G + +
Sbjct: 778 DNVGIGNSGTGNSGIGNTGSYNTGIGNVGVANTGLFNIGNLNTGIGNPGNYNSGAHNVGS 837
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L L + NTG + N NTG LI
Sbjct: 838 TNTGGANQGDYNTGWLNLGDYNTGLANVGNVNTGALI 874
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 77/172 (44%), Gaps = 9/172 (5%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTG 59
P + A + G N +G N G +G N G G+GL G G N +G
Sbjct: 709 PGLTAAFNNIGFGNTGDNNIGFGNTGNGNIGFGNTGNGNIGIGLNGDGLQGFGGWNSGSG 768
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
+GL N T +G+ N TG G+ N G N G +G+ NTG + N NTG
Sbjct: 769 NIGLFNSGTDNVGIGNSGTGNSGIGNT-----GSYNTGIGNVGV--ANTGLFNIGNLNTG 821
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
N N+G + + NTGG + NTG L L + NTG + N NTG L
Sbjct: 822 IGNPGNYNSGAHNVGSTNTGGANQGDYNTGWLNLGDYNTGLANVGNVNTGAL 873
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 99/239 (41%), Gaps = 12/239 (5%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++ G N + LG N G +G N G LG N +G N G +G N
Sbjct: 1103 VANDGSFNIGSANLGDYNFGLGNVGNTNFGPGNLGSTNIGGANIGDTNFGFGNIGANNFG 1162
Query: 68 TG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGL 123
G G L + N +G N + +G+ N G +G N + G+GL G G
Sbjct: 1163 FGNSGASLTDGNHN-IGFGNTGSNNIGIGNTGDGNIGFGNTGNDNTGIGLNGDGLQGFGG 1221
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
N +G +G+ N T +G+ N TG G+ N + G+ N GL N + G+
Sbjct: 1222 WNSGSGNIGVFNSGTDNVGIGNSGTGNSGIGNSGSYNTGIGNSGLANTGLFNSGSFNTGI 1281
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N + NTG + + NTG NTG L + + NTG N NTG LI
Sbjct: 1282 GNVGS-------YNTGTFNVGDHNTGNFNTGQSNTGSLNVGDLNTGWANTGNVNTGALI 1333
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Query: 86 CNTGGLGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
NTG + NTG G+GL G G N +G +GL N T +G N TG
Sbjct: 298 ANTGSFNVGFGNTGSNNIGIGLSGDGKIGFGSLNSGSGNIGLFNSGTNNIGFFNSGTGNF 357
Query: 142 GLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
G+ N + G N +TG N NTG N NTG N NTGG N NT
Sbjct: 358 GVLNSGSYNTGFGNSGEASTGVFNPGNANTGWANTGNHNTGSFNAGNTNTGGFNPGNLNT 417
Query: 199 GGLGLRNCNTGGL 211
G + +TG
Sbjct: 418 GWANTGDVDTGAF 430
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
+G N +G N G +G N G G+GL G G N +G +GL N T
Sbjct: 718 IGFGNTGDNNIGFGNTGNGNIGFGNTGNGNIGIGLNGDGLQGFGGWNSGSGNIGLFNSGT 777
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+G+ N TG G+ N + G+ N NTG + N NTG N N+G + +
Sbjct: 778 DNVGIGNSGTGNSGIGNTGSYNTGIGNVGVANTGLFNIGNLNTGIGNPGNYNSGAHNVGS 837
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L L + NTG + N NTG L
Sbjct: 838 TNTGGANQGDYNTGWLNLGDYNTGLANVGNVNTGAL 873
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
+G N +G N G +G N G G+GL G G N +G +GL N T
Sbjct: 718 IGFGNTGDNNIGFGNTGNGNIGFGNTGNGNIGIGLNGDGLQGFGGWNSGSGNIGLFNSGT 777
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+G+ N TG G+ N + G+ N NTG + N NTG N N+G + +
Sbjct: 778 DNVGIGNSGTGNSGIGNTGSYNTGIGNVGVANTGLFNIGNLNTGIGNPGNYNSGAHNVGS 837
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTGG + NTG L L + NTG + N NTG L
Sbjct: 838 TNTGGANQGDYNTGWLNLGDYNTGLANVGNVNTGAL 873
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
+G N +G N G +G N G G+GL G G N +G +GL N T
Sbjct: 718 IGFGNTGDNNIGFGNTGNGNIGFGNTGNGNIGIGLNGDGLQGFGGWNSGSGNIGLFNSGT 777
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
+G+ N TG G+ N + G+ N NTG + N NTG N N+G + +
Sbjct: 778 DNVGIGNSGTGNSGIGNTGSYNTGIGNVGVANTGLFNIGNLNTGIGNPGNYNSGAHNVGS 837
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L L + NTG + N NTG L
Sbjct: 838 TNTGGANQGDYNTGWLNLGDYNTGLANVGNVNTGAL 873
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
+G N +G N G +G N G G+GL G G N +G +GL N T
Sbjct: 718 IGFGNTGDNNIGFGNTGNGNIGFGNTGNGNIGIGLNGDGLQGFGGWNSGSGNIGLFNSGT 777
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+G+ N TG G+ N + G+ N NTG + N NTG N N+G + +
Sbjct: 778 DNVGIGNSGTGNSGIGNTGSYNTGIGNVGVANTGLFNIGNLNTGIGNPGNYNSGAHNVGS 837
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTGG + NTG L L + NTG + N NTG L
Sbjct: 838 TNTGGANQGDYNTGWLNLGDYNTGLANVGNVNTGAL 873
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 93/244 (38%), Gaps = 11/244 (4%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
AP ST L + G NTG LG N G +G N G N G
Sbjct: 1573 APDSTFNLGFADIGIFNAGAANTGNYNLGFGNIGDGNVGAANVGNFNFGGANIGDTNFGF 1632
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GL 121
N G N G L N N +G N + G N G +G N G G+
Sbjct: 1633 GNIGNNNFGFGNS---GASLTNGNHN-IGFGNTGSNNFGFGNTGDGNIGFGNTGDGNIGI 1688
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
GL G G N +G +GL N T +GL N + +G+ N G GL N
Sbjct: 1689 GLSGDGLRGFGALNTGSGNVGLFNSGTNNIGLFNSGSDNIGIGNSGIGNAGLFNSGNYDT 1748
Query: 182 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G+ N NTG + NTG + NTG + NTGG N +TG + +T
Sbjct: 1749 GMFNAGIVNTGIGNAGDFNTGTFNAGDANTGNANSGSYNTGGFNSGNYDTGWANTGDVDT 1808
Query: 239 GGLI 242
G I
Sbjct: 1809 GIFI 1812
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 104/247 (42%), Gaps = 21/247 (8%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGL-------RNCNTGGLGLRNCNTG--GLGLRNC 66
N G N N G L L + N G + N +G LG N G G GL
Sbjct: 655 ANIGDYNFGNANIGNLNLGSANIGFGNIGGGNVGDYNLGSGNLGSANIGFGNAGPGLT-A 713
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLR 124
+G N +G N G +G N G G+GL G G N +G +GL
Sbjct: 714 AFNNIGFGNTGDNNIGFGNTGNGNIGFGNTGNGNIGIGLNGDGLQGFGGWNSGSGNIGLF 773
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N T +G+ N TG G+ N G N G +G+ NTG + N NTG
Sbjct: 774 NSGTDNVGIGNSGTGNSGIGNT-----GSYNTGIGNVGV--ANTGLFNIGNLNTGIGNPG 826
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
N N+G + + NTGG + NTG L L + NTG + N NTG L N + G I+
Sbjct: 827 NYNSGAHNVGSTNTGGANQGDYNTGWLNLGDYNTGLANVGNVNTGALISGNYDNG--ILW 884
Query: 245 KSKRGAQ 251
+S AQ
Sbjct: 885 RSDYRAQ 891
>gi|119486371|ref|ZP_01620430.1| hypothetical protein L8106_16994 [Lyngbya sp. PCC 8106]
gi|119456584|gb|EAW37714.1| hypothetical protein L8106_16994 [Lyngbya sp. PCC 8106]
Length = 772
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 70/225 (31%), Gaps = 5/225 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
L + G L+N N L + L + N L N G L N
Sbjct: 524 SLTSAKLGHANLKNANLSTANLMAASLNSANLSDANLSHANLECANLKGANLTGANLSYA 583
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
LR N G+ LR+ N LR N L + G L N L+ N +
Sbjct: 584 NLRGANLSGVNLRDANLSYADLRRVNLSQANLDSAYLRGANLYRANISRSSLKQTNLIKV 643
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
L N L+ N LR+ N L + N L N L N N
Sbjct: 644 NLSGVNLSSSELQEANLSSTYLRHSNFTQANLSDANLSHADLTRANLIHANLSNTNLSYT 703
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+R+ L N N G N G L + N G+ C
Sbjct: 704 SIRHAELNQANLSNANLTG-----ANLFGSHLNHANIEGVTFEYC 743
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 66/209 (31%)
Query: 32 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 91
L++ N L + G L+N N L + L + N L N G
Sbjct: 514 DLQSANLTHASLTSAKLGHANLKNANLSTANLMAASLNSANLSDANLSHANLECANLKGA 573
Query: 92 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
L N LR N G+ LR+ N LR N L + G L N
Sbjct: 574 NLTGANLSYANLRGANLSGVNLRDANLSYADLRRVNLSQANLDSAYLRGANLYRANISRS 633
Query: 152 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
L+ N + L N L+ N LR+ N L + N L N
Sbjct: 634 SLKQTNLIKVNLSGVNLSSSELQEANLSSTYLRHSNFTQANLSDANLSHADLTRANLIHA 693
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L N N +R+ L N N G
Sbjct: 694 NLSNTNLSYTSIRHAELNQANLSNANLTG 722
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 66/203 (32%), Gaps = 5/203 (2%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
+ A +++ L + N L N G L N LR N G+ LR+ N L
Sbjct: 546 MAASLNSANLSDANLSHANLECANLKGANLTGANLSYANLRGANLSGVNLRDANLSYADL 605
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
R N L + G L N L+ N + L N L+ N L
Sbjct: 606 RRVNLSQANLDSAYLRGANLYRANISRSSLKQTNLIKVNLSGVNLSSSELQEANLSSTYL 665
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
R+ N L + N L N L N N +R+ L N N G
Sbjct: 666 RHSNFTQANLSDANLSHADLTRANLIHANLSNTNLSYTSIRHAELNQANLSNANLTG--- 722
Query: 184 RNCNTGGLGLRNCNTGGLGLRNC 206
N G L + N G+ C
Sbjct: 723 --ANLFGSHLNHANIEGVTFEYC 743
>gi|440580609|emb|CCG11012.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 608
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 86/247 (34%), Gaps = 17/247 (6%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 72
N G N G + + N G +G N LG+ N N G+GL N G+G
Sbjct: 290 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNIGIGLTGDNMIGIG 349
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
N G LG N +GL N +G N G N G N G
Sbjct: 350 ALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTG 409
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 189
N +G G N G N +G+ N NTG NTG L + NTG
Sbjct: 410 FGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTG 469
Query: 190 GLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+ NTGG + NTG G N TG G N G +N NTG
Sbjct: 470 WANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTG 529
Query: 240 GLIVPKS 246
+ S
Sbjct: 530 AFFIGHS 536
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 82/224 (36%), Gaps = 5/224 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N + +G N
Sbjct: 266 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNN 325
Query: 81 LGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 326 LGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGD 385
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-- 196
G N G N G N +G G N G N +G+ N
Sbjct: 386 SNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGA 445
Query: 197 -NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 446 YNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 489
>gi|78033474|emb|CAJ30090.1| hypothetical acidic protein, pentapeptide repeat [Magnetospirillum
gryphiswaldense MSR-1]
gi|144901135|emb|CAM77999.1| pentapeptide repeat containing protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 503
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 65/184 (35%), Gaps = 12/184 (6%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
LR N G+ L LR G LR+ N L + + G L+ N G
Sbjct: 10 LRGANLAGMDLSGSLLSLANLRKAVLSGANLRDSNLPRASLEDADLSGAKLQGANLAGAT 69
Query: 153 LRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
L N G +R N G L + G+ L N G L N G L N G
Sbjct: 70 LLRANFSGANMRMANLAGANLAGRMDLSGVDLTGANLAGAKLMGANFSGATLTGANLAGA 129
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS-----------KRGAQENASRSENE 260
RN N G L + T G L N G ++ +S + A ++ +E E
Sbjct: 130 DARNANFSGADLTDAVTAGTLLDGANMSGAVIRRSSSRTQAPDAVPEPEAPQSYDEAEAE 189
Query: 261 PCLV 264
P V
Sbjct: 190 PLPV 193
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 52/142 (36%), Gaps = 1/142 (0%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S LR G LR+ N L + + G L+ N G L N G +R N
Sbjct: 25 LSLANLRKAVLSGANLRDSNLPRASLEDADLSGAKLQGANLAGATLLRANFSGANMRMAN 84
Query: 68 TGGLGLR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G L + G+ L N G L N G L N G RN N G L +
Sbjct: 85 LAGANLAGRMDLSGVDLTGANLAGAKLMGANFSGATLTGANLAGADARNANFSGADLTDA 144
Query: 127 NTGGLGLRNCNTGGLGLRNCNT 148
T G L N G +R ++
Sbjct: 145 VTAGTLLDGANMSGAVIRRSSS 166
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 50/137 (36%), Gaps = 1/137 (0%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
LR G LR+ N L + + G L+ N G L N G +R N G
Sbjct: 30 LRKAVLSGANLRDSNLPRASLEDADLSGAKLQGANLAGATLLRANFSGANMRMANLAGAN 89
Query: 83 LR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
L + G+ L N G L N G L N G RN N G L + T G
Sbjct: 90 LAGRMDLSGVDLTGANLAGAKLMGANFSGATLTGANLAGADARNANFSGADLTDAVTAGT 149
Query: 142 GLRNCNTGGLGLRNCNT 158
L N G +R ++
Sbjct: 150 LLDGANMSGAVIRRSSS 166
>gi|433631034|ref|YP_007264662.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140070010]
gi|432162627|emb|CCK60008.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140070010]
Length = 2147
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 1174 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 1225
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 1226 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1285
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1286 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1345
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG N NTG L N NTG L + NTG + + NTG LI
Sbjct: 1346 NVNTGIGNAGSYNTGSYNAGNTNTGDLNPGNTNTGYLNPGDLNTGWGNIGDLNTGALI 1403
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 91/204 (44%), Gaps = 18/204 (8%)
Query: 9 STKG-LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRN 65
S+KG L N + LGL N G +G N G L L N GG GL N + +GL N
Sbjct: 196 SSKGVLANLS---LGLANSGFGHMGAANL--GILNLGGLNPGGNNFGLGNVGSNNVGLGN 250
Query: 66 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
G +G N G G GL N G G N TG +GL N TG +G+ N TG G+
Sbjct: 251 TGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGI 310
Query: 124 ----RNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+ NTG NTG G+ N G G N NTG L + NTG + N
Sbjct: 311 GNSGASYNTGIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSN 368
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGL 201
TG N NTG N NTGG
Sbjct: 369 TGFFNPGNLNTGVGNTGNVNTGGF 392
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LGL N G +G N G L L N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGHMGAANL--GILNLGGLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL----RNCNTGGLG 142
G G GL N G G N TG +GL N TG +G+ N TG G+ + NTG
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGASYNTGIGN 323
Query: 143 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 201 LGLRNCNTGGL 211
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LGL N G +G N G L L N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGHMGAANL--GILNLGGLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL----RNCNTGGLG 152
G G GL N G G N TG +GL N TG +G+ N TG G+ + NTG
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGASYNTGIGN 323
Query: 153 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 211 LGLRNCNTGGL 221
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
LGL N G +G N G L L N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGHMGAANL--GILNLGGLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 109 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL----RNCNTGGLG 162
G G GL N G G N TG +GL N TG +G+ N TG G+ + NTG
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGASYNTGIGN 323
Query: 163 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 220
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 221 LGLRNCNTGGL 231
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LGL N G +G N G L L N GG GL N + +GL N G +G N
Sbjct: 206 LGLANSGFGHMGAANL--GILNLGGLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL----RNCNTGGLG 172
G G GL N G G N TG +GL N TG +G+ N TG G+ + NTG
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGASYNTGIGN 323
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1241 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1300
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1301 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1360
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
N NTG L N NTG L + NTG + + NTG L
Sbjct: 1361 SYNAGNTNTGDLNPGNTNTGYLNPGDLNTGWGNIGDLNTGAL 1402
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 98/242 (40%), Gaps = 22/242 (9%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNT 68
T G+ N GL N +T GL ++G +G + G +RN G L N
Sbjct: 1119 TSGISNFGNTVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFAND 1176
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
G L L N N LG N +G +G N +G N G G N + G N +
Sbjct: 1177 GTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGS 1228
Query: 129 GGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 180
LG N G L N N GG G N G +G N TG G+GL N G
Sbjct: 1229 NNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVG 1288
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCN 237
G N +G +G N G +G N G +G+ N NTG + N NTG N N
Sbjct: 1289 FGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVN 1348
Query: 238 TG 239
TG
Sbjct: 1349 TG 1350
>gi|433642051|ref|YP_007287810.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140070008]
gi|432158599|emb|CCK55895.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140070008]
Length = 2172
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G L L N N LG N +G +G N +G N G G N + G N
Sbjct: 1199 ANDGTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGN 1250
Query: 76 CNTGGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCN 127
+ LG N G L N N GG G N G +G N TG G+GL N
Sbjct: 1251 VGSNNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDN 1310
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 184
G G N +G +G N G +G N G +G+ N NTG + N NTG
Sbjct: 1311 QVGFGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTG 1370
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N NTG + NTG N NTG L N NTG L + NTG + + NTG LI
Sbjct: 1371 NVNTGIGNAGSYNTGSYNAGNTNTGDLNPGNTNTGYLNPGDLNTGWGNIGDLNTGALI 1428
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 9 STKG-LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRN 65
S+KG L N + LG N G +G N G L L + N GG GL N + +GL N
Sbjct: 196 SSKGVLANLS---LGPANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGN 250
Query: 66 CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
G +G N G G GL N G G N TG +GL N TG +G+ N TG G+
Sbjct: 251 TGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGI 310
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
N T N G G N G+ N G G N NTG L + NTG
Sbjct: 311 GNSGTS----YNTGIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNT 364
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
+ NTG N NTG N NTGG
Sbjct: 365 GSSNTGFFNPGNLNTGVGNTGNVNTGGF 392
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 83/195 (42%), Gaps = 12/195 (6%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
LG N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGPANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 89 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 207 NTGGLGLRNCNTGGL 221
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 83/195 (42%), Gaps = 12/195 (6%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
LG N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGPANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 99 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G G GL N G G N TG +GL N TG +G+ N TG G+ N T N
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNT 319
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
G G N G+ N G G N NTG L + NTG + NTG N
Sbjct: 320 GIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNL 377
Query: 217 NTGGLGLRNCNTGGL 231
NTG N NTGG
Sbjct: 378 NTGVGNTGNVNTGGF 392
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 85/191 (44%), Gaps = 14/191 (7%)
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
LG N G +G N G L L + N GG GL N + +GL N G +G N
Sbjct: 206 LGPANSGFGQMGAANL--GILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGN 263
Query: 119 G--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG- 172
G G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 264 GNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGN 323
Query: 173 LRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
NTG G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 324 TGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGV 381
Query: 231 LGLRNCNTGGL 241
N NTGG
Sbjct: 382 GNTGNVNTGGF 392
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 10 TKGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLG 62
T+ L N N GG G N G +G N TG G+GL N G G N +G +G
Sbjct: 1266 TEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVGFGALNSGSGNIG 1325
Query: 63 LRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
N G +G N G +G+ N NTG + N NTG N NTG + NTG
Sbjct: 1326 FFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAGSYNTG 1385
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
N NTG L N NTG L + NTG + + NTG L
Sbjct: 1386 SYNAGNTNTGDLNPGNTNTGYLNPGDLNTGWGNIGDLNTGAL 1427
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 98/242 (40%), Gaps = 22/242 (9%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNT 68
T G+ N GL N +T GL ++G +G + G +RN G L N
Sbjct: 1144 TSGISNFGNTVSGLYNTSTLGLATSAFHSG-VGNTDSQLAGF-MRNAAGGTLFNFGFAND 1201
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
G L L N N LG N +G +G N +G N G G N + G N +
Sbjct: 1202 GTLNLGNAN---LGDYNVGSGNVGSYNFGSG-----NIGNGSFGFGNIGSNNFGFGNVGS 1253
Query: 129 GGLGLRNCNTG-GLGLRNC---NTGG--LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGG 180
LG N G L N N GG G N G +G N TG G+GL N G
Sbjct: 1254 NNLGFANTGPGLTEALHNIGFGNIGGNNYGFANIGNGNIGFGNTGTGNIGIGLTGDNQVG 1313
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCN 237
G N +G +G N G +G N G +G+ N NTG + N NTG N N
Sbjct: 1314 FGALNSGSGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVN 1373
Query: 238 TG 239
TG
Sbjct: 1374 TG 1375
>gi|417969816|ref|ZP_12610752.1| pentapeptide repeat-containing protein [Corynebacterium glutamicum
S9114]
gi|344045920|gb|EGV41589.1| pentapeptide repeat-containing protein [Corynebacterium glutamicum
S9114]
Length = 183
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 62/186 (33%), Gaps = 8/186 (4%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
++N G LR+ N G LR + + LR N L GG LR G
Sbjct: 1 MKNTKLSGADLRSANLEGADLRGAHLENVDLRGSNLDTTNLEGAFLGGANLR-----GAN 55
Query: 73 LRNCNTGGLGLRNCN---TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
LR + G LR+ N + G R C + G R C G + C G + C
Sbjct: 56 LRGASLGRANLRDANLEESAGCEPRRCRSAGCEPRGCRPAGCEPKGCRPAGCKPKGCRPV 115
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
G L C C G R C G R C G + C G + C
Sbjct: 116 GSRLAGCENAECENAECEPAGCEPRGCEPRGCEPRGCRPAGCKPKGCRPAGCKPKGCTPK 175
Query: 190 GLGLRN 195
G R
Sbjct: 176 GCTPRE 181
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 62/186 (33%), Gaps = 8/186 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
++N G LR+ N G LR + + LR N L GG LR G
Sbjct: 1 MKNTKLSGADLRSANLEGADLRGAHLENVDLRGSNLDTTNLEGAFLGGANLR-----GAN 55
Query: 83 LRNCNTGGLGLRNCN---TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
LR + G LR+ N + G R C + G R C G + C G + C
Sbjct: 56 LRGASLGRANLRDANLEESAGCEPRRCRSAGCEPRGCRPAGCEPKGCRPAGCKPKGCRPV 115
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
G L C C G R C G R C G + C G + C
Sbjct: 116 GSRLAGCENAECENAECEPAGCEPRGCEPRGCEPRGCRPAGCKPKGCRPAGCKPKGCTPK 175
Query: 200 GLGLRN 205
G R
Sbjct: 176 GCTPRE 181
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 62/186 (33%), Gaps = 8/186 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
++N G LR+ N G LR + + LR N L GG LR G
Sbjct: 1 MKNTKLSGADLRSANLEGADLRGAHLENVDLRGSNLDTTNLEGAFLGGANLR-----GAN 55
Query: 93 LRNCNTGGLGLRNCN---TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
LR + G LR+ N + G R C + G R C G + C G + C
Sbjct: 56 LRGASLGRANLRDANLEESAGCEPRRCRSAGCEPRGCRPAGCEPKGCRPAGCKPKGCRPV 115
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
G L C C G R C G R C G + C G + C
Sbjct: 116 GSRLAGCENAECENAECEPAGCEPRGCEPRGCEPRGCRPAGCKPKGCRPAGCKPKGCTPK 175
Query: 210 GLGLRN 215
G R
Sbjct: 176 GCTPRE 181
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 62/186 (33%), Gaps = 8/186 (4%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 102
++N G LR+ N G LR + + LR N L GG LR G
Sbjct: 1 MKNTKLSGADLRSANLEGADLRGAHLENVDLRGSNLDTTNLEGAFLGGANLR-----GAN 55
Query: 103 LRNCNTGGLGLRNCN---TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
LR + G LR+ N + G R C + G R C G + C G + C
Sbjct: 56 LRGASLGRANLRDANLEESAGCEPRRCRSAGCEPRGCRPAGCEPKGCRPAGCKPKGCRPV 115
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
G L C C G R C G R C G + C G + C
Sbjct: 116 GSRLAGCENAECENAECEPAGCEPRGCEPRGCEPRGCRPAGCKPKGCRPAGCKPKGCTPK 175
Query: 220 GLGLRN 225
G R
Sbjct: 176 GCTPRE 181
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 62/186 (33%), Gaps = 8/186 (4%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
++N G LR+ N G LR + + LR N L GG LR G
Sbjct: 1 MKNTKLSGADLRSANLEGADLRGAHLENVDLRGSNLDTTNLEGAFLGGANLR-----GAN 55
Query: 113 LRNCNTGGLGLRNCN---TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
LR + G LR+ N + G R C + G R C G + C G + C
Sbjct: 56 LRGASLGRANLRDANLEESAGCEPRRCRSAGCEPRGCRPAGCEPKGCRPAGCKPKGCRPV 115
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
G L C C G R C G R C G + C G + C
Sbjct: 116 GSRLAGCENAECENAECEPAGCEPRGCEPRGCEPRGCRPAGCKPKGCRPAGCKPKGCTPK 175
Query: 230 GLGLRN 235
G R
Sbjct: 176 GCTPRE 181
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 61/181 (33%), Gaps = 8/181 (4%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
++N G LR+ N G LR + + LR N L GG LR G
Sbjct: 1 MKNTKLSGADLRSANLEGADLRGAHLENVDLRGSNLDTTNLEGAFLGGANLR-----GAN 55
Query: 123 LRNCNTGGLGLRNCN---TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
LR + G LR+ N + G R C + G R C G + C G + C
Sbjct: 56 LRGASLGRANLRDANLEESAGCEPRRCRSAGCEPRGCRPAGCEPKGCRPAGCKPKGCRPV 115
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G L C C G R C G R C G + C G + C
Sbjct: 116 GSRLAGCENAECENAECEPAGCEPRGCEPRGCEPRGCRPAGCKPKGCRPAGCKPKGCTPK 175
Query: 240 G 240
G
Sbjct: 176 G 176
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 57/176 (32%), Gaps = 8/176 (4%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---- 63
+S LR+ N G LR + + LR N L GG LR N G L
Sbjct: 6 LSGADLRSANLEGADLRGAHLENVDLRGSNLDTTNLEGAFLGGANLRGANLRGASLGRAN 65
Query: 64 -RNCN---TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
R+ N + G R C + G R C G + C G + C G L C
Sbjct: 66 LRDANLEESAGCEPRRCRSAGCEPRGCRPAGCEPKGCRPAGCKPKGCRPVGSRLAGCENA 125
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
C G R C G R C G + C G + C G R
Sbjct: 126 ECENAECEPAGCEPRGCEPRGCEPRGCRPAGCKPKGCRPAGCKPKGCTPKGCTPRE 181
>gi|85860772|ref|YP_462974.1| pentapeptide repeat-containing protein [Syntrophus aciditrophicus
SB]
gi|85723863|gb|ABC78806.1| pentapeptide repeat domain protein [Syntrophus aciditrophicus SB]
Length = 306
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 73/238 (30%), Gaps = 15/238 (6%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNT-----GGLGLRNCNTGGLGLRNCNTGGL 61
P LR + GG+ L N + G L N G L + G L+ N G
Sbjct: 30 PEQVPDLRRADLGGMDLCNADLGKADLSEANLQETDLSGANLHKADLNGANLKGVNLVGA 89
Query: 62 GLRNCNTGGLGLRNCNTGGLGLR-----NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
L G L + G LR N G L N L G LR
Sbjct: 90 DLSEACLNGADLSEADLGKADLRRTCLSKVNLRGTKLIEANLSNTDLDEVELRGQNLRRT 149
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-----RNCNTGGL 171
G L N LR + G L + N G L+ N L R N G
Sbjct: 150 KLIGANLSEANLSNTDLREADLHGADLSDANLTGADLQKSNLSKANLNWTRLREANLSGA 209
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
L LR N L + N LR + G L N N G LR N G
Sbjct: 210 DLSEAYLKRADLRKANLSRANLVDANLNRANLRGTDLRGADLGNANLAGADLREANLG 267
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 68/219 (31%), Gaps = 10/219 (4%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR- 64
A +S L+ + G L + G L+ N G L G L + G LR
Sbjct: 54 ADLSEANLQETDLSGANLHKADLNGANLKGVNLVGADLSEACLNGADLSEADLGKADLRR 113
Query: 65 ----NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
N G L N L G LR G L N LR + G
Sbjct: 114 TCLSKVNLRGTKLIEANLSNTDLDEVELRGQNLRRTKLIGANLSEANLSNTDLREADLHG 173
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L + N G L+ N L N LR N G L LR N
Sbjct: 174 ADLSDANLTGADLQKSN-----LSKANLNWTRLREANLSGADLSEAYLKRADLRKANLSR 228
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
L + N LR + G L N N G LR N G
Sbjct: 229 ANLVDANLNRANLRGTDLRGADLGNANLAGADLREANLG 267
>gi|149915056|ref|ZP_01903585.1| hypothetical protein RAZWK3B_16830 [Roseobacter sp. AzwK-3b]
gi|149811244|gb|EDM71081.1| hypothetical protein RAZWK3B_16830 [Roseobacter sp. AzwK-3b]
Length = 211
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 50/121 (41%), Gaps = 15/121 (12%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L + + G+ L N LRN N LR N GG N GG L + N G
Sbjct: 18 LEDADLEGVNLEGANLSSAYLRNAN-----LRRANLGG-----ANLGGANLEDANLWGAD 67
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
L+N N G L+N N GG L + N LR N G LR N G L+ + G
Sbjct: 68 LQNANLWGADLQNANLGGAYLWSAN-----LRYANLRGAYLRRANLRGANLQYSDLWGAD 122
Query: 143 L 143
L
Sbjct: 123 L 123
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 50/121 (41%), Gaps = 15/121 (12%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 102
L + + G+ L N LRN N LR N GG N GG L + N G
Sbjct: 18 LEDADLEGVNLEGANLSSAYLRNAN-----LRRANLGG-----ANLGGANLEDANLWGAD 67
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
L+N N G L+N N GG L + N LR N G LR N G L+ + G
Sbjct: 68 LQNANLWGADLQNANLGGAYLWSAN-----LRYANLRGAYLRRANLRGANLQYSDLWGAD 122
Query: 163 L 163
L
Sbjct: 123 L 123
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 50/121 (41%), Gaps = 15/121 (12%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L + + G+ L N LRN N LR N GG N GG L + N G
Sbjct: 18 LEDADLEGVNLEGANLSSAYLRNAN-----LRRANLGG-----ANLGGANLEDANLWGAD 67
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
L+N N G L+N N GG L + N LR N G LR N G L+ + G
Sbjct: 68 LQNANLWGADLQNANLGGAYLWSAN-----LRYANLRGAYLRRANLRGANLQYSDLWGAD 122
Query: 183 L 183
L
Sbjct: 123 L 123
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 50/121 (41%), Gaps = 15/121 (12%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
L + + G+ L N LRN N LR N GG N GG L + N G
Sbjct: 18 LEDADLEGVNLEGANLSSAYLRNAN-----LRRANLGG-----ANLGGANLEDANLWGAD 67
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 202
L+N N G L+N N GG L + N LR N G LR N G L+ + G
Sbjct: 68 LQNANLWGADLQNANLGGAYLWSAN-----LRYANLRGAYLRRANLRGANLQYSDLWGAD 122
Query: 203 L 203
L
Sbjct: 123 L 123
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 50/121 (41%), Gaps = 15/121 (12%)
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
L + + G+ L N LRN N LR N GG N GG L + N G
Sbjct: 18 LEDADLEGVNLEGANLSSAYLRNAN-----LRRANLGG-----ANLGGANLEDANLWGAD 67
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
L+N N G L+N N GG L + N LR N G LR N G L+ + G
Sbjct: 68 LQNANLWGADLQNANLGGAYLWSAN-----LRYANLRGAYLRRANLRGANLQYSDLWGAD 122
Query: 223 L 223
L
Sbjct: 123 L 123
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
L + + G+ L N LRN N LR N GG N GG L + N G
Sbjct: 18 LEDADLEGVNLEGANLSSAYLRNAN-----LRRANLGG-----ANLGGANLEDANLWGAD 67
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L+N N G L+N N GG L + N LR N G LR N G L+ + G
Sbjct: 68 LQNANLWGADLQNANLGGAYLWSAN-----LRYANLRGAYLRRANLRGANLQYSDLWG 120
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 47/115 (40%), Gaps = 5/115 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
S L + + G+ L N LRN N L N GG L + N G L+N N
Sbjct: 14 SPANLEDADLEGVNLEGANLSSAYLRNANLRRANLGGANLGGANLEDANLWGADLQNANL 73
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
G L+N N GG L + N LR N G LR N G L+ + G L
Sbjct: 74 WGADLQNANLGGAYLWSAN-----LRYANLRGAYLRRANLRGANLQYSDLWGADL 123
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S+ LRN N LR N GG N GG L + N G L+N N G L+N N
Sbjct: 33 LSSAYLRNAN-----LRRANLGG-----ANLGGANLEDANLWGADLQNANLWGADLQNAN 82
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
GG L + N LR N G LR N G L+ + G L
Sbjct: 83 LGGAYLWSAN-----LRYANLRGAYLRRANLRGANLQYSDLWGADL 123
>gi|306777677|ref|ZP_07416014.1| hypothetical protein TMAG_04047, partial [Mycobacterium
tuberculosis SUMu001]
gi|308213993|gb|EFO73392.1| hypothetical protein TMAG_04047 [Mycobacterium tuberculosis
SUMu001]
Length = 491
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
R G+GL N G G N +G +GL N TG +G N TG G+ N + G+
Sbjct: 2 RQLGIFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGI 61
Query: 174 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N GL N NTG + + NTG NTGG + NTG L + NTG
Sbjct: 62 GNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGV 121
Query: 231 LGLRNCNTGGLI 242
+ NTG I
Sbjct: 122 ANSGDVNTGAFI 133
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R G+GL N G G N +G +GL N TG +G N TG G+ N + G+
Sbjct: 2 RQLGIFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGI 61
Query: 74 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
N GL N NTG + + NTG NTGG + NTG L + NTG
Sbjct: 62 GNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGV 121
Query: 131 LGLRNCNTGGLGLRNCNTGGL 151
+ NTG N + G L
Sbjct: 122 ANSGDVNTGAFISGNYSNGAL 142
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 24 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 83
R G+GL N G G N +G +GL N TG +G N TG G+ N + G+
Sbjct: 2 RQLGIFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGI 61
Query: 84 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N GL N NTG + + NTG NTGG + NTG L + NTG
Sbjct: 62 GNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGV 121
Query: 141 LGLRNCNTGGLGLRNCNTGGL 161
+ NTG N + G L
Sbjct: 122 ANSGDVNTGAFISGNYSNGAL 142
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
R G+GL N G G N +G +GL N TG +G N TG G+ N + G+
Sbjct: 2 RQLGIFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGI 61
Query: 94 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N GL N NTG + + NTG NTGG + NTG L + NTG
Sbjct: 62 GNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGV 121
Query: 151 LGLRNCNTGGLGLRNCNTGGL 171
+ NTG N + G L
Sbjct: 122 ANSGDVNTGAFISGNYSNGAL 142
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 44 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 103
R G+GL N G G N +G +GL N TG +G N TG G+ N + G+
Sbjct: 2 RQLGIFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGI 61
Query: 104 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 160
N GL N NTG + + NTG NTGG + NTG L + NTG
Sbjct: 62 GNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGV 121
Query: 161 LGLRNCNTGGLGLRNCNTGGL 181
+ NTG N + G L
Sbjct: 122 ANSGDVNTGAFISGNYSNGAL 142
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
R G+GL N G G N +G +GL N TG +G N TG G+ N + G+
Sbjct: 2 RQLGIFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGI 61
Query: 114 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
N GL N NTG + + NTG NTGG + NTG L + NTG
Sbjct: 62 GNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGV 121
Query: 171 LGLRNCNTGGLGLRNCNTGGL 191
+ NTG N + G L
Sbjct: 122 ANSGDVNTGAFISGNYSNGAL 142
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
R G+GL N G G N +G +GL N TG +G N TG G+ N + G+
Sbjct: 2 RQLGIFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGI 61
Query: 124 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N GL N NTG + + NTG NTGG + NTG L + NTG
Sbjct: 62 GNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGV 121
Query: 181 LGLRNCNTGGLGLRNCNTGGL 201
+ NTG N + G L
Sbjct: 122 ANSGDVNTGAFISGNYSNGAL 142
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R G+GL N G G N +G +GL N TG +G N TG G+ N + G+
Sbjct: 2 RQLGIFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGI 61
Query: 134 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N GL N NTG + + NTG NTGG + NTG L + NTG
Sbjct: 62 GNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGV 121
Query: 191 LGLRNCNTGGLGLRNCNTGGL 211
+ NTG N + G L
Sbjct: 122 ANSGDVNTGAFISGNYSNGAL 142
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
R G+GL N G G N +G +GL N TG +G N TG G+ N + G+
Sbjct: 2 RQLGIFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGI 61
Query: 144 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
N GL N NTG + + NTG NTGG + NTG L + NTG
Sbjct: 62 GNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGV 121
Query: 201 LGLRNCNTGGLGLRNCNTGGL 221
+ NTG N + G L
Sbjct: 122 ANSGDVNTGAFISGNYSNGAL 142
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
R G+GL N G G N +G +GL N TG +G N TG G+ N + G+
Sbjct: 2 RQLGIFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGI 61
Query: 154 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
N GL N NTG + + NTG NTGG + NTG L + NTG
Sbjct: 62 GNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGV 121
Query: 211 LGLRNCNTGGLGLRNCNTGGL 231
+ NTG N + G L
Sbjct: 122 ANSGDVNTGAFISGNYSNGAL 142
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 163
R G+GL N G G N +G +GL N TG +G N TG G+ N + G+
Sbjct: 2 RQLGIFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGI 61
Query: 164 RNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 220
N GL N NTG + + NTG NTGG + NTG L + NTG
Sbjct: 62 GNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGV 121
Query: 221 LGLRNCNTGGLGLRNCNTGGL 241
+ NTG N + G L
Sbjct: 122 ANSGDVNTGAFISGNYSNGAL 142
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 58/133 (43%), Gaps = 3/133 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 10 GLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIAST 69
Query: 72 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
GL N NTG + + NTG NTGG + NTG L + NTG + NT
Sbjct: 70 GLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNT 129
Query: 129 GGLGLRNCNTGGL 141
G N + G L
Sbjct: 130 GAFISGNYSNGAL 142
>gi|218247485|ref|YP_002372856.1| pentapeptide repeat-containing protein [Cyanothece sp. PCC 8801]
gi|218167963|gb|ACK66700.1| pentapeptide repeat protein [Cyanothece sp. PCC 8801]
Length = 401
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 65/175 (37%), Gaps = 10/175 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
L+N N GL L N L+N N G L N + L++ L
Sbjct: 41 LQNANLKGLNLEGVNLEKANLKNANLQGANLNNAHLKQAILQDARLMDAQLEGTVLEAAN 100
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N G L N N G+ L N G+ L N N G +R G+ L+ N G
Sbjct: 101 LINTKLDGANLNNANLKGVNLVNSQMNGIILTNANLEGATMR-----GVSLQEANLDGAI 155
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
L + + N G L+N + G LR G+ L++ N G L +
Sbjct: 156 LIQADLTVHDEKRVNLTGASLKNADLSGAHLR-----GIRLKDANLEGANLEKTD 205
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 65/175 (37%), Gaps = 10/175 (5%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L+N N GL L N L+N N G L N + L++ L
Sbjct: 41 LQNANLKGLNLEGVNLEKANLKNANLQGANLNNAHLKQAILQDARLMDAQLEGTVLEAAN 100
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
L N G L N N G+ L N G+ L N N G +R G+ L+ N G
Sbjct: 101 LINTKLDGANLNNANLKGVNLVNSQMNGIILTNANLEGATMR-----GVSLQEANLDGAI 155
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
L + + N G L+N + G LR G+ L++ N G L +
Sbjct: 156 LIQADLTVHDEKRVNLTGASLKNADLSGAHLR-----GIRLKDANLEGANLEKTD 205
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 86/252 (34%), Gaps = 28/252 (11%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ L N G L N N G+ L N G+ L N N G +R G+ L+ N
Sbjct: 96 LEAANLINTKLDGANLNNANLKGVNLVNSQMNGIILTNANLEGATMR-----GVSLQEAN 150
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 126
G L + + N G L+N + G LR G+ L++ N G L
Sbjct: 151 LDGAILIQADLTVHDEKRVNLTGASLKNADLSGAHLR-----GIRLKDANLEGANLEKTD 205
Query: 127 -------NTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
NT G + T + L G + + + N N G L
Sbjct: 206 FTRDIPNNTTAKGALSVATSPIPLVLPGAVLGAIGNFAIGEASALNADVSNTNLAGANLE 265
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
N + L N N L+N N L N L N N L N N G+ L
Sbjct: 266 EANLQDINLENSN-----LKNANLEKANLHNAYLVNTNLTNANLSLAKLTNINMEGVNLS 320
Query: 235 NCNTGGLIVPKS 246
+ N G + KS
Sbjct: 321 SANLAGANLDKS 332
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 75/231 (32%), Gaps = 21/231 (9%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I A ++ + N G L+N + G LR G+ L++ N G L +
Sbjct: 157 IQADLTVHDEKRVNLTGASLKNADLSGAHLR-----GIRLKDANLEGANLEKTDFT---- 207
Query: 64 RNC--NTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
R+ NT G + T + L G + + + N N G L
Sbjct: 208 RDIPNNTTAKGALSVATSPIPLVLPGAVLGAIGNFAIGEASALNADVSNTNLAGANLEEA 267
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
N + L N N L+N N L N L N N L N N G+ L +
Sbjct: 268 NLQDINLENSN-----LKNANLEKANLHNAYLVNTNLTNANLSLAKLTNINMEGVNLSSA 322
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
N G L L N L N N L N N L N N
Sbjct: 323 NLAGANLDKSYLAKANLTNAKLESAKLTNVNLTDTQLTNANLMKAQLANAN 373
>gi|340626761|ref|YP_004745213.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
gi|340004951|emb|CCC44099.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
Length = 1308
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
>gi|257061179|ref|YP_003139067.1| pentapeptide repeat-containing protein [Cyanothece sp. PCC 8802]
gi|256591345|gb|ACV02232.1| pentapeptide repeat protein [Cyanothece sp. PCC 8802]
Length = 401
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 65/175 (37%), Gaps = 10/175 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
L+N N GL L N L+N N G L N + L++ L
Sbjct: 41 LQNANLKGLNLEGVNLEKANLKNANLQGANLNNAHLKQAILQDARLMDAQLEGTVLEAAN 100
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N G L N N G+ L N G+ L N N G +R G+ L+ N G
Sbjct: 101 LINTKLDGANLNNANLKGVNLVNSQMNGIILTNANLEGATMR-----GVSLQEANLDGAI 155
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
L + + N G L+N + G LR G+ L++ N G L +
Sbjct: 156 LIQADLTVHDEKRANLTGASLKNADLSGAHLR-----GIRLKDANLEGANLEKTD 205
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 65/175 (37%), Gaps = 10/175 (5%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L+N N GL L N L+N N G L N + L++ L
Sbjct: 41 LQNANLKGLNLEGVNLEKANLKNANLQGANLNNAHLKQAILQDARLMDAQLEGTVLEAAN 100
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
L N G L N N G+ L N G+ L N N G +R G+ L+ N G
Sbjct: 101 LINTKLDGANLNNANLKGVNLVNSQMNGIILTNANLEGATMR-----GVSLQEANLDGAI 155
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
L + + N G L+N + G LR G+ L++ N G L +
Sbjct: 156 LIQADLTVHDEKRANLTGASLKNADLSGAHLR-----GIRLKDANLEGANLEKTD 205
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 86/252 (34%), Gaps = 28/252 (11%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+ L N G L N N G+ L N G+ L N N G +R G+ L+ N
Sbjct: 96 LEAANLINTKLDGANLNNANLKGVNLVNSQMNGIILTNANLEGATMR-----GVSLQEAN 150
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 126
G L + + N G L+N + G LR G+ L++ N G L
Sbjct: 151 LDGAILIQADLTVHDEKRANLTGASLKNADLSGAHLR-----GIRLKDANLEGANLEKTD 205
Query: 127 -------NTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
NT G + T + L G + + + N N G L
Sbjct: 206 FTRDIPNNTTAKGALSVATSPIPLVLPGAVLGAIGNFAIGEASALNADVSNTNLAGANLE 265
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
N + L N N L+N N L N L N N L N N G+ L
Sbjct: 266 EANLQDINLENSN-----LKNANLEKANLHNAYLVNTNLTNANLSLAKLTNINMEGVNLS 320
Query: 235 NCNTGGLIVPKS 246
+ N G + KS
Sbjct: 321 SANLAGANLDKS 332
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 75/231 (32%), Gaps = 21/231 (9%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I A ++ + N G L+N + G LR G+ L++ N G L +
Sbjct: 157 IQADLTVHDEKRANLTGASLKNADLSGAHLR-----GIRLKDANLEGANLEKTDFT---- 207
Query: 64 RNC--NTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
R+ NT G + T + L G + + + N N G L
Sbjct: 208 RDIPNNTTAKGALSVATSPIPLVLPGAVLGAIGNFAIGEASALNADVSNTNLAGANLEEA 267
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
N + L N N L+N N L N L N N L N N G+ L +
Sbjct: 268 NLQDINLENSN-----LKNANLEKANLHNAYLVNTNLTNANLSLAKLTNINMEGVNLSSA 322
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
N G L L N L N N L N N L N N
Sbjct: 323 NLAGANLDKSYLAKANLTNAKLESAKLTNVNLTDTQLTNANLMKAQLANAN 373
>gi|306799310|ref|ZP_07437612.1| hypothetical protein TMFG_04045, partial [Mycobacterium
tuberculosis SUMu006]
gi|308340486|gb|EFP29337.1| hypothetical protein TMFG_04045 [Mycobacterium tuberculosis
SUMu006]
Length = 454
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 1 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 60
Query: 180 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 61 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 120
Query: 237 NTGGLI 242
NTG I
Sbjct: 121 NTGAFI 126
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 1 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 60
Query: 80 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 61 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 120
Query: 137 NTGGL 141
NTG
Sbjct: 121 NTGAF 125
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 1 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 60
Query: 90 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 61 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 120
Query: 147 NTGGL 151
NTG
Sbjct: 121 NTGAF 125
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 99
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 1 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 60
Query: 100 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 61 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 120
Query: 157 NTGGL 161
NTG
Sbjct: 121 NTGAF 125
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 1 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 60
Query: 110 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 61 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 120
Query: 167 NTGGL 171
NTG
Sbjct: 121 NTGAF 125
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 1 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 60
Query: 120 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 61 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 120
Query: 177 NTGGL 181
NTG
Sbjct: 121 NTGAF 125
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 1 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 60
Query: 130 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 61 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 120
Query: 187 NTGGL 191
NTG
Sbjct: 121 NTGAF 125
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 1 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 60
Query: 140 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 61 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 120
Query: 197 NTGGL 201
NTG
Sbjct: 121 NTGAF 125
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 1 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 60
Query: 150 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 61 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 120
Query: 207 NTGGL 211
NTG
Sbjct: 121 NTGAF 125
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 1 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 60
Query: 160 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 61 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 120
Query: 217 NTGGL 221
NTG
Sbjct: 121 NTGAF 125
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 1 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 60
Query: 170 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 226
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 61 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 120
Query: 227 NTGGL 231
NTG
Sbjct: 121 NTGAF 125
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 3 GLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIAST 62
Query: 72 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
GL N NTG + + NTG NTGG + NTG L + NTG + NT
Sbjct: 63 GLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNT 122
Query: 129 GGL 131
G
Sbjct: 123 GAF 125
>gi|289760465|ref|ZP_06519843.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
gi|289707971|gb|EFD71987.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
Length = 322
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 102/263 (38%), Gaps = 16/263 (6%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGL 73
N G L + N G L + N G L + N G L + N G L + N G +G
Sbjct: 65 ANLGFWNLGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGF 124
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N G GL G +G N G G+GL G G N TG +GL N TG +
Sbjct: 125 GNV---GPGLTAA-IGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNI 180
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNT 188
G N TG G+ N G+ N + G N NTG + NTG N NT
Sbjct: 181 GFGNSGTGNWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNT 240
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
+ NTGG N NTG N NTG + NTG N + G R
Sbjct: 241 ASFNPGDYNTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAFNSGNYSNGFF-----WR 295
Query: 249 GAQENASRSENEPCLVKIKFTPN 271
G + + + +I ++ +
Sbjct: 296 GDYQGLGGFAYQSAVSEIPWSYD 318
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 84/212 (39%), Gaps = 13/212 (6%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN----- 65
L + N G L + N G L + N G L + N G L + N G +G N
Sbjct: 72 LGSANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGL 131
Query: 66 -CNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
G +G N G G+GL G G N TG +GL N TG +G N TG G
Sbjct: 132 TAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWG 191
Query: 123 LRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
+ N G+ N + G N NTG + NTG N NT + NTG
Sbjct: 192 IGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTASFNPGDYNTG 251
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
G N NTG N NTG + NTG
Sbjct: 252 GFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 283
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 82/209 (39%), Gaps = 13/209 (6%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRN------CN 57
A I L + N G L + N G L + N G L + N G +G N
Sbjct: 75 ANIGNYNLGSANIGVYNLGSANIGDFNLGSANIGDFNLGSANIGSSNIGFGNVGPGLTAA 134
Query: 58 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
G +G N G G+GL G G N TG +GL N TG +G N TG G+ N
Sbjct: 135 IGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTGNWGIGN 194
Query: 116 CNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
G+ N + G N NTG + NTG N NT + NTGG
Sbjct: 195 SGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTASFNPGDYNTGGFN 254
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N NTG N NTG + NTG
Sbjct: 255 PGNYNTGYFNPGNSNTGIANSGDVNTGAF 283
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 2 PPIVAPISTKGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
P + A I G N G G+GL G G N TG +GL N TG +G N TG
Sbjct: 129 PGLTAAIGNIGFGNTGNGNIGIGLTGDTMTGFGGWNSGTGNIGLFNSGTGNIGFGNSGTG 188
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
G+ N G+ N + G N NTG + NTG N NT +
Sbjct: 189 NWGIGNSGDYNTGIGNTGSTNSGFFNTGLVNTGIGNSGDYNTGLFNAGNTNTASFNPGDY 248
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
NTGG N NTG N NTG + NTG
Sbjct: 249 NTGGFNPGNYNTGYFNPGNSNTGIANSGDVNTGAF 283
>gi|306790594|ref|ZP_07428916.1| hypothetical protein TMDG_04045, partial [Mycobacterium
tuberculosis SUMu004]
gi|308332995|gb|EFP21846.1| hypothetical protein TMDG_04045 [Mycobacterium tuberculosis
SUMu004]
Length = 542
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 2 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 61
Query: 180 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 62 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 121
Query: 237 NTGGLI 242
NTG I
Sbjct: 122 NTGAFI 127
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 2 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 61
Query: 80 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 62 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 121
Query: 137 NTGGL 141
NTG
Sbjct: 122 NTGAF 126
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 2 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 61
Query: 90 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 62 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 121
Query: 147 NTGGL 151
NTG
Sbjct: 122 NTGAF 126
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 99
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 2 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 61
Query: 100 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 62 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 121
Query: 157 NTGGL 161
NTG
Sbjct: 122 NTGAF 126
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 2 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 61
Query: 110 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 62 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 121
Query: 167 NTGGL 171
NTG
Sbjct: 122 NTGAF 126
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 2 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 61
Query: 120 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 62 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 121
Query: 177 NTGGL 181
NTG
Sbjct: 122 NTGAF 126
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 2 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 61
Query: 130 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 62 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 121
Query: 187 NTGGL 191
NTG
Sbjct: 122 NTGAF 126
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 2 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 61
Query: 140 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 62 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 121
Query: 197 NTGGL 201
NTG
Sbjct: 122 NTGAF 126
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 2 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 61
Query: 150 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 62 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 121
Query: 207 NTGGL 211
NTG
Sbjct: 122 NTGAF 126
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 2 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 61
Query: 160 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 62 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 121
Query: 217 NTGGL 221
NTG
Sbjct: 122 NTGAF 126
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 2 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 61
Query: 170 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 226
GL N NTG + + NTG NTGG + NTG L + NTG +
Sbjct: 62 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDV 121
Query: 227 NTGGL 231
NTG
Sbjct: 122 NTGAF 126
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL N G G N +G +GL N TG +G N TG G+ N + G+ N
Sbjct: 4 GLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIAST 63
Query: 72 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
GL N NTG + + NTG NTGG + NTG L + NTG + NT
Sbjct: 64 GLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNT 123
Query: 129 GGL 131
G
Sbjct: 124 GAF 126
>gi|167969276|ref|ZP_02551553.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 618
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 97/267 (36%), Gaps = 25/267 (9%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 64
++ ++T N + G N + +G N + +G N LG+ N LG+
Sbjct: 280 ISAMATGAAWNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIA 339
Query: 65 NC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
N N G+GL N G+G N G LG N +GL N +G N G
Sbjct: 340 NLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFG 399
Query: 123 LRNC---NTG-------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 169
N NTG G N +G G N G N +G+ N NTG
Sbjct: 400 FFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTG 459
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTG 219
NTG L + NTG + NTGG + NTG G N TG
Sbjct: 460 SFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTG 519
Query: 220 GLGLRNCNTGGLGLRNCNTGGLIVPKS 246
G N G +N NTG + S
Sbjct: 520 NSGFNNSGDANSGFQNTNTGAFFIGHS 546
>gi|167519865|ref|XP_001744272.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777358|gb|EDQ90975.1| predicted protein [Monosiga brevicollis MX1]
Length = 597
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 101/277 (36%), Gaps = 56/277 (20%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-LRNCNTGGLGLRN-CNTGGLGLR 74
+TGG G + G ++GG G + GG G +TGG G +TGG G
Sbjct: 22 STGGFGAKPAGGGFGAAPAASSGGFGAKPAG-GGFGTAPAASTGGFGAAPAASTGGFGAA 80
Query: 75 N-CNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGLRNCNTGGLGLRNCNTGGLG 132
+TGG G + G +TGG G +TGG G + G +TGG G
Sbjct: 81 PAASTGGFGAKPAGGGFGAAPAASTGGFGAAPAASTGGFGAKPAGGGFGAAPAASTGGFG 140
Query: 133 -LRNCNTGGLG-----LRNCNTGGLGLRNCNTGGLGLRNCNTGG---------------- 170
+ +TGG G TGG G +TGG G +TGG
Sbjct: 141 AAQTASTGGFGAKPATTAAPATGGFGAPAASTGGFGAPAASTGGFGAAKPATTAAPATGG 200
Query: 171 LGLRNCNTGGLG-----------------LRNCNTGGLG-----LRNCNTGGLGLRN-CN 207
G +TGG G +TGG G TGG G +
Sbjct: 201 FGAPAASTGGFGAAKPATTAAPATGGFGTAPAASTGGFGAKPATTAAPATGGFGAAPAAS 260
Query: 208 TGGLGLRNCN-----TGGLGLRN-CNTGGLGLRNCNT 238
TGG G + TGG G +TGG G + +
Sbjct: 261 TGGFGAKPATSAAPATGGFGAAPAASTGGFGAKPATS 297
>gi|383309074|ref|YP_005361885.1| PPE family protein [Mycobacterium tuberculosis RGTB327]
gi|380723027|gb|AFE18136.1| PPE family protein [Mycobacterium tuberculosis RGTB327]
Length = 720
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 68/159 (42%), Gaps = 7/159 (4%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN----CNTGGLG 182
TG +G N TG G+ N + G+ N GL N G+ N NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFTTGVVNNAGSYNTGSFN 368
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 369 -AEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 66/156 (42%), Gaps = 7/156 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN----CNTGGLGLRN 125
+G N TG G+ N + G+ N GL N G+ N NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFTTGVVNNAGSYNTGSFN-AE 370
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 371 ANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 406
>gi|25395397|pir||D88035 protein M01D1.5 [imported] - Caenorhabditis elegans
Length = 712
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 86/237 (36%), Gaps = 3/237 (1%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++TKGL T GL + T GL T G + NT GL T GL +
Sbjct: 263 LTTKGL---TTKGLTTKGLTTKGLTTMGLTTKGFITKGLNTMGLATMGLTTMGLTTKGLT 319
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T GL + T GL + T GL + T GL T GL T GL +
Sbjct: 320 TKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTMGLTTKGLTTKGLT 379
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL T GL + T GL + T GL T GL T GL +
Sbjct: 380 TKGLTTMGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLVTMGLTTMGLTTMGLTTKGLT 439
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
T GL + T GL T G + T GL T GL T G I
Sbjct: 440 TKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITK 496
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 85/234 (36%), Gaps = 2/234 (0%)
Query: 10 TKGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
TKGL +GL T GL + T GL T G + T GL
Sbjct: 180 TKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLT 239
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T GL + T GL T GL + T GL + T GL T G + N
Sbjct: 240 TMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLN 299
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL T GL + T GL + T GL + T GL + T GL
Sbjct: 300 TMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLA 359
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL T GL + T GL T GL + T GL + T GL
Sbjct: 360 TMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLTTKGLTTKGL 413
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 85/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL T GL + T GL + T GL T GL T GL +
Sbjct: 13 LTTKGLTTMGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGVTTKGLTTMGLTTKGLTTKG 72
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T G + T GL T GL T GL + T GL + T GL +
Sbjct: 73 LTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKG 132
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL T GL T GL T G + T GL
Sbjct: 133 LTTMGLTTKGFTTKGLTTMGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMG 192
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL + T GL T GL T GL
Sbjct: 193 LTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGL 248
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 85/232 (36%), Gaps = 3/232 (1%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
TKGL GL T GL + T GL T GL + T GL + T
Sbjct: 225 TKGLTTM---GLATMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTK 281
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL T G + NT GL T GL + T GL + T GL + T
Sbjct: 282 GLTTMGLTTKGFITKGLNTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTM 341
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
GL + T GL T GL T GL + T GL T GL + T
Sbjct: 342 GLTTKGFTTKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGLTTKGLTTM 401
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
GL + T GL T GL T GL + T GL + T GL
Sbjct: 402 GLTTKGLTTKGLTTMGLVTMGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGL 453
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 90/241 (37%), Gaps = 7/241 (2%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL T GL + T GL + T GL + T GL + T GL
Sbjct: 93 LTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMG 152
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL T GL T G + T GL T GL + T GL +
Sbjct: 153 LTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKG 212
Query: 126 CNTGGLGLRNCNTGGL---GLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
T GL + T GL GL T GL + T GL T GL + T G
Sbjct: 213 LTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKG 272
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L + T GL T G + NT GL T GL + T GL + T G
Sbjct: 273 LTTKGLTTKGLTTMGLTTKGFITKGLNTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKG 332
Query: 241 L 241
L
Sbjct: 333 L 333
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 87/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL + T G + T GL T GL T GL + T GL +
Sbjct: 63 LTTKGLTTKGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKG 122
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL + T GL T GL T GL T G +
Sbjct: 123 LTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLTTMGLATMGLTTKGLTTMGLTTKGFITKG 182
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL T GL + T GL + T GL + T GL T GL
Sbjct: 183 LTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMG 242
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL T GL + T GL + T GL + T GL + T GL
Sbjct: 243 LTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGL 298
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 92/245 (37%), Gaps = 7/245 (2%)
Query: 4 IVAPISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
I ++T GL T GL + T GL T GL + T GL + T GL
Sbjct: 224 ITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGL 283
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
T G + NT GL T GL + T GL + T GL + T GL
Sbjct: 284 TTMGLTTKGFITKGLNTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGL 343
Query: 122 GLRNCNTGGL---GLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
+ T GL GL T GL + T GL + T GL + T GL
Sbjct: 344 TTKGFTTKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGL 403
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
T GL + T GL T GL T GL + T GL + T GL +
Sbjct: 404 TTKGLTTKGLTTMGLVTMGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGF 463
Query: 237 NTGGL 241
T GL
Sbjct: 464 TTKGL 468
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 88/236 (37%), Gaps = 7/236 (2%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL + T GL T G + T GL T GL + T GL
Sbjct: 198 LTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMG 257
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL + T GL T G + NT GL T GL +
Sbjct: 258 LTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLNTMGLATMGLTTMGLTTKG 317
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL + T GL + T GL T GL T GL +
Sbjct: 318 LTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGL-----TTMGLATMGLTTMGLTTKG 372
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL T GL + T GL T GL
Sbjct: 373 LTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLVTMGLTTMGL 428
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 89/236 (37%), Gaps = 7/236 (2%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL + T GL + T GL T G + T GL T GL +
Sbjct: 313 LTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTMGLTTKG 372
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL + T GL T GL + T GL T GL
Sbjct: 373 LTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLVTMGLTTMGLTTMG 432
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL + T GL + T GL T GL + T GL +
Sbjct: 433 LTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKG 492
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL T GL T GL + T GL + T GL + T GL
Sbjct: 493 FITKGL-----TTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGL 543
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 89/234 (38%), Gaps = 8/234 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++TKGL T GL T G + NT GL T GL + T GL +
Sbjct: 273 LTTKGL---TTKGLTTMGLTTKGFITKGLNTMGLATMGLTTMGLTTKGLTTKGLTTKGLT 329
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T GL + T GL + T GL T GL T GL + T GL +
Sbjct: 330 TKGLTTKGLTTMGLTTKGFTTKGL-----TTMGLATMGLTTMGLTTKGLTTKGLTTKGLT 384
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL + T GL T GL + T GL T GL T GL +
Sbjct: 385 TMGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLVTMGLTTMGLTTMGLTTKGLTTKGLT 444
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL T GL + T GL + T GL
Sbjct: 445 TKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKGL 498
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 90/239 (37%), Gaps = 8/239 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++TKGL T GL + T GL + T GL T GL T GL
Sbjct: 118 LTTKGL---TTKGLTTKGLTTMGLTTKGFTTKGLTTMGLTTMGLATMGLTTKGLTTMGLT 174
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLR 124
T G + T GL T GL + T GL + T GL + T GL GL
Sbjct: 175 TKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLA 234
Query: 125 NC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
T GL + T GL T GL + T GL + T GL T G
Sbjct: 235 TMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFI 294
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+ NT GL T GL + T GL + T GL + T GL + T GL
Sbjct: 295 TKGLNTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGL 353
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 95/264 (35%), Gaps = 8/264 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++TKGL T GL + T GL T G + T GL T GL
Sbjct: 433 LTTKGL---TTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLT 489
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T G + T GL T GL + T GL + T GL + T GL
Sbjct: 490 TKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLA 549
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL + T GL + T GL + T GL T GL + T GL +
Sbjct: 550 TMGLTTKGLTTMGLTTKGFITKGLNMMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLT 609
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP-KS 246
T GL T GL T GL T GL T GL + T GL +
Sbjct: 610 TMGLTTMGLTTMGLTTMGLTTMGLTTMGLTTMGLTTMGLTTKGLTTMDLTTMGLTTMGLT 669
Query: 247 KRGAQ----ENASRSENEPCLVKI 266
+G E + R N P +I
Sbjct: 670 TKGPTTNFLEFSRRFWNIPEFSQI 693
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 87/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL T G + T GL T GL + T GL + T GL +
Sbjct: 163 LTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKG 222
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL T GL T GL T GL + T GL + T GL +
Sbjct: 223 FITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKG 282
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL T GL T GL + T GL + T GL
Sbjct: 283 LTTMGLTTKGFITKGLNTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMG 342
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T G + T GL T GL + T GL + T GL + T GL
Sbjct: 343 LTTKGFTTKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGLTTKGL 398
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 86/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL + T GL T G + T GL T GL + T GL +
Sbjct: 323 LTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKG 382
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL T GL + T GL T GL T GL +
Sbjct: 383 LTTMGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLVTMGLTTMGLTTMGLTTKGLTTKG 442
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL + T GL T GL + T GL + T GL
Sbjct: 443 LTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMG 502
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL T GL + T GL T G + T GL T GL
Sbjct: 503 LATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGL 558
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 83/234 (35%), Gaps = 3/234 (1%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++TKGL GL + T GL T GL T GL + T G +
Sbjct: 28 LTTKGLTTM---GLTTKGFTTKGLTTMGVTTKGLTTMGLTTKGLTTKGLTTKGFTTKGLT 84
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T GL T GL T GL + T GL + T GL + T GL +
Sbjct: 85 TMGLATMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFT 144
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL T GL T GL T G + T GL T GL +
Sbjct: 145 TKGLTTMGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLT 204
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL T GL T GL T GL
Sbjct: 205 TKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGL 258
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 85/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+TKGL +GL T GL + T GL T GL + T GL +
Sbjct: 348 FTTKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLTTKG 407
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL T GL T GL + T GL + T GL T G +
Sbjct: 408 LTTKGLTTMGLVTMGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKG 467
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL T GL T G + T GL T GL + T GL +
Sbjct: 468 LTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKG 527
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL T GL + T GL + T GL + T GL
Sbjct: 528 LTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLNMMGLATMGL 583
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 87/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL + T GL T GL + T GL + T GL T GL
Sbjct: 368 LTTKGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLVTMGLTTMG 427
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL + T GL T G + T GL T GL
Sbjct: 428 LTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMG 487
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T G + T GL T GL + T GL + T GL + T GL
Sbjct: 488 LTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMG 547
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL + T GL T GL + T GL
Sbjct: 548 LATMGLTTKGLTTMGLTTKGFITKGLNMMGLATMGLTTMGLTTKGLTTKGLTTKGL 603
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 87/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL + T GL + T GL T GL T GL + T GL +
Sbjct: 388 LTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLVTMGLTTMGLTTMGLTTKGLTTKGLTTKG 447
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL T G + T GL T GL T G + T GL
Sbjct: 448 LTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMG 507
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL + T GL + T GL T GL + T GL +
Sbjct: 508 LTTMGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKG 567
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL T GL + T GL + T GL T GL
Sbjct: 568 FITKGLNMMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTMGLTTMGL 623
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 85/234 (36%), Gaps = 2/234 (0%)
Query: 10 TKGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
TKGL +GL T GL + T GL + T GL T G +
Sbjct: 295 TKGLNTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLT 354
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T GL T GL + T GL + T GL + T GL T GL +
Sbjct: 355 TMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLTTKGLTTKGLT 414
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL T GL T GL + T GL + T GL + T GL
Sbjct: 415 TMGLVTMGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLA 474
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL T GL T GL + T GL
Sbjct: 475 TMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGL 528
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 84/241 (34%), Gaps = 7/241 (2%)
Query: 8 ISTKGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
++TKG T GL T GL + T G + T GL T G
Sbjct: 38 LTTKGFTTKGLTTMGVTTKGLTTMGLTTKGLTTKGLTTKGFTTKGLTTMGLATMGLTTKG 97
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
L T GL + T GL + T GL + T GL + T GL T G
Sbjct: 98 LTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLTTMG 157
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L T GL T G + T GL T GL + T GL + T G
Sbjct: 158 LATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMG 217
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L + T GL T GL T GL T GL + T GL + T G
Sbjct: 218 LTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKG 277
Query: 241 L 241
L
Sbjct: 278 L 278
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 86/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGL--RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKG + T GL T GL + T GL + T GL T GL
Sbjct: 138 LTTKGFTTKGLTTMGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMG 197
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL T G + T GL T GL + T GL
Sbjct: 198 LTTKGLTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMG 257
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL + T GL T G + NT GL T GL +
Sbjct: 258 LTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLNTMGLATMGLTTMGLTTKG 317
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL + T GL T GL T GL
Sbjct: 318 LTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTMGLTTKGL 373
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 90/246 (36%), Gaps = 12/246 (4%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCN 57
++TKGL T GL + T GL + T GL + T GL GL
Sbjct: 243 LTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLNTMG 302
Query: 58 TGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
+GL T GL + T GL + T GL T G + T GL
Sbjct: 303 LATMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMG 362
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
T GL + T GL + T GL + T GL T GL + T GL
Sbjct: 363 LTTMGLTTKGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLVTMG 422
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 235
T GL T GL + T GL + T GL + T GL T GL +
Sbjct: 423 LTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKG 482
Query: 236 CNTGGL 241
T GL
Sbjct: 483 LTTMGL 488
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 85/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL T GL T GL + T GL + T GL T G +
Sbjct: 408 LTTKGLTTMGLVTMGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKG 467
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL T GL T G + T GL T GL + T GL +
Sbjct: 468 LTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKG 527
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL T GL + T GL + T GL + T GL
Sbjct: 528 LTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLNMMGLATMGLTTMG 587
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL + T GL + T GL T GL T GL T GL
Sbjct: 588 LTTKGLTTKGLTTKGLTTKGLTTMGLTTMGLTTMGLTTMGLTTMGLTTMGLTTMGL 643
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 88/241 (36%), Gaps = 7/241 (2%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++T GL T GL T GL + T GL + T GL + T GL +
Sbjct: 83 LTTMGLATMGLTTKGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKG 142
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL T GL T GL T G + T GL T GL +
Sbjct: 143 FTTKGLTTMGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKG 202
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 180
T GL + T GL + T GL GL T GL + T GL T G
Sbjct: 203 LTTKGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKG 262
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L + T GL + T GL T G + NT GL T GL + T G
Sbjct: 263 LTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFITKGLNTMGLATMGLTTMGLTTKGLTTKG 322
Query: 241 L 241
L
Sbjct: 323 L 323
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 85/236 (36%), Gaps = 2/236 (0%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++T GL T GL + T GL T GL + T GL + T GL
Sbjct: 358 LATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLTTKGLTTKGLTTMG 417
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL T GL + T GL + T GL T G + T GL
Sbjct: 418 LVTMGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMG 477
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL T G + T GL T GL + T GL + T GL +
Sbjct: 478 LTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKG 537
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL T GL + T GL + T GL + T GL T GL
Sbjct: 538 FTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLNMMGLATMGLTTMGLTTKGL 593
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 85/234 (36%), Gaps = 3/234 (1%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
++TKGL T GL T GL T GL + T GL + T GL
Sbjct: 403 LTTKGL---TTKGLTTMGLVTMGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLT 459
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
T G + T GL T GL T G + T GL T GL +
Sbjct: 460 TKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLT 519
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T GL + T GL + T GL T GL + T GL + T GL +
Sbjct: 520 TKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLNMMGLA 579
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T GL T GL + T GL + T GL T GL T GL
Sbjct: 580 TMGLTTMGLTTKGLTTKGLTTKGLTTKGLTTMGLTTMGLTTMGLTTMGLTTMGL 633
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 86/241 (35%), Gaps = 7/241 (2%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
++TKGL T G + T GL T GL + T GL T GL +
Sbjct: 208 LTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMGLTTKGLTTMGLTTMGLTTKGLTTKG 267
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLGLRNC--NTGGLGLRNCNTGG 120
T GL + T GL T G GL +GL T GL + T G
Sbjct: 268 LTTKGLTTKGLTTKGLTTMGLTTKGFITKGLNTMGLATMGLTTMGLTTKGLTTKGLTTKG 327
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L + T GL T G + T GL T GL + T GL + T G
Sbjct: 328 LTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMG 387
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L + T GL T GL + T GL T GL T GL + T G
Sbjct: 388 LTTKGLTTKGLTTMGLTTKGLTTKGLTTMGLVTMGLTTMGLTTMGLTTKGLTTKGLTTKG 447
Query: 241 L 241
L
Sbjct: 448 L 448
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 86/241 (35%), Gaps = 7/241 (2%)
Query: 8 ISTKGLRNC--NTGGL---GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGG 60
++TKGL T G GL +GL T GL + T GL T G
Sbjct: 333 LTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTMGLTTKGLTTKGLTTKGLTTMGLTTKG 392
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
L + T GL + T GL T GL T GL + T GL + T G
Sbjct: 393 LTTKGLTTMGLTTKGLTTKGLTTMGLVTMGLTTMGLTTMGLTTKGLTTKGLTTKGLTTKG 452
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L T G + T GL T GL T G + T GL T G
Sbjct: 453 LTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKGLTTMGLATMGLTTMG 512
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L + T GL + T GL + T GL T GL + T GL + T G
Sbjct: 513 LTTKGLTTKGLTTKGLTTMGLTTKGFTTKGLTTMGLATMGLTTKGLTTMGLTTKGFITKG 572
Query: 241 L 241
L
Sbjct: 573 L 573
>gi|218248498|ref|YP_002373869.1| pentapeptide repeat-containing protein [Cyanothece sp. PCC 8801]
gi|257061562|ref|YP_003139450.1| pentapeptide repeat-containing protein [Cyanothece sp. PCC 8802]
gi|218168976|gb|ACK67713.1| pentapeptide repeat protein [Cyanothece sp. PCC 8801]
gi|256591728|gb|ACV02615.1| pentapeptide repeat protein [Cyanothece sp. PCC 8802]
Length = 343
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 77/241 (31%), Gaps = 6/241 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A +S L N G L + N LR N LR+ N G L N G L
Sbjct: 103 ADLSHADLSWVNLEGSTLISANLSNANLRQTNLTNADLRSANLSGANLSGANLSGAKLSR 162
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ L + G L + L + L + LRN + L+
Sbjct: 163 ADLSEADLSGVDLSGANLSRADLSEADLMEVDLSYSNLYKADLSESKLRNSDLEEAFLQG 222
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTGGLGLRNCNTGGLGLR 184
N L+ + LR L L N + L N + LR CN G LR
Sbjct: 223 ANFSRANLKGADLSRAVLRENTLSLLTLSEFNVQSVNLSNEIDLSSANLRGCNLRGAILR 282
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
+ N G L N LR N LR + G RN N + L I+P
Sbjct: 283 HANLGYGLLHKTNLIDAILREANMIDASLRGGDLRGAKFRNSNINAINLMEA-----IMP 337
Query: 245 K 245
Sbjct: 338 D 338
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 69/214 (32%), Gaps = 1/214 (0%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I A +S LR N LR+ N G L N G L + L + G L
Sbjct: 121 ISANLSNANLRQTNLTNADLRSANLSGANLSGANLSGAKLSRADLSEADLSGVDLSGANL 180
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ L + L + LRN + L+ N L+ + L
Sbjct: 181 SRADLSEADLMEVDLSYSNLYKADLSESKLRNSDLEEAFLQGANFSRANLKGADLSRAVL 240
Query: 124 RNCNTGGLGLRNCNTGGLGLRN-CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
R L L N + L N + LR CN G LR+ N G L N
Sbjct: 241 RENTLSLLTLSEFNVQSVNLSNEIDLSSANLRGCNLRGAILRHANLGYGLLHKTNLIDAI 300
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
LR N LR + G RN N + L
Sbjct: 301 LREANMIDASLRGGDLRGAKFRNSNINAINLMEA 334
>gi|86606624|ref|YP_475387.1| pentapeptide repeat-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86555166|gb|ABD00124.1| pentapeptide repeat family protein [Synechococcus sp. JA-3-3Ab]
Length = 371
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 84/255 (32%), Gaps = 31/255 (12%)
Query: 4 IVAPISTKGLRN---CNTGGLGLRNCNTGGLGLRNCN--TGGLGLRNCNTGGLGLRNCNT 58
IVA +G RN + G+ L+ GG N LGL CN G L +
Sbjct: 124 IVA--YRRGERNFAYADLEGVDLQEARLGGANFYEANLRKANLGL--CNFNGAHLHQADL 179
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-----LRNC----NTG 109
L+ G L+ + G LR G LR LR+ N G
Sbjct: 180 RQANLQGAKLSGAVLQGADLRGADLRGAKVSGTSLRGSRLSEETRLEERLRHIWQLQNWG 239
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
G G + G L + GLGLR LR N + LR N G LR N
Sbjct: 240 GQG---QDFSGQDLSKADLRGLGLRQIR-----LRGANLKRVDLRGSNLEGADLRGANLQ 291
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
LR N L + GG LR G LR + L N G
Sbjct: 292 RADLRGANLQNADLEGADLGGAELRQAQLQGANLRRADLSRANLTQANLEG-----AQIE 346
Query: 230 GLGLRNCNTGGLIVP 244
GL GLI P
Sbjct: 347 GLKHSGSQIAGLIFP 361
>gi|260841809|ref|XP_002614103.1| hypothetical protein BRAFLDRAFT_57239 [Branchiostoma floridae]
gi|229299493|gb|EEN70112.1| hypothetical protein BRAFLDRAFT_57239 [Branchiostoma floridae]
Length = 410
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 63/176 (35%), Gaps = 15/176 (8%)
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R G+ + L LR N N + G L +C L + L
Sbjct: 237 RELRMQGINFSGADLSKLDLRYINFKQANFHNADLSGANLASC-----SLERADLSKAVL 291
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNT 188
N G+ + N G +R CN GLR CN G+ L GG+ LR
Sbjct: 292 EGANLQGVKMVCANLEGASMRGCNFEDPTGLRANMEGCNMKGVDLECSQMGGVNLRVATL 351
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
L+NCN LR G L NCN G L++ N G ++ ++ P
Sbjct: 352 KNASLQNCN-----LRGAILAGTDLENCNLTGCDLQDANLRGANVKGATFEEMLTP 402
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 63/172 (36%), Gaps = 15/172 (8%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I+T R G+ + L LR N N + G L +C L +
Sbjct: 231 IATPSNRELRMQGINFSGADLSKLDLRYINFKQANFHNADLSGANLASC-----SLERAD 285
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLG 122
L N G+ + N G +R CN GLR CN G+ L GG+
Sbjct: 286 LSKAVLEGANLQGVKMVCANLEGASMRGCNFEDPTGLRANMEGCNMKGVDLECSQMGGVN 345
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
LR L+NCN LR G L NCN G L++ N G ++
Sbjct: 346 LRVATLKNASLQNCN-----LRGAILAGTDLENCNLTGCDLQDANLRGANVK 392
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 60/166 (36%), Gaps = 15/166 (9%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
R G+ + L LR N N + G L +C L + L
Sbjct: 237 RELRMQGINFSGADLSKLDLRYINFKQANFHNADLSGANLASC-----SLERADLSKAVL 291
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNT 148
N G+ + N G +R CN GLR CN G+ L GG+ LR
Sbjct: 292 EGANLQGVKMVCANLEGASMRGCNFEDPTGLRANMEGCNMKGVDLECSQMGGVNLRVATL 351
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
L+NCN LR G L NCN G L++ N G ++
Sbjct: 352 KNASLQNCN-----LRGAILAGTDLENCNLTGCDLQDANLRGANVK 392
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 60/166 (36%), Gaps = 15/166 (9%)
Query: 44 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 103
R G+ + L LR N N + G L +C L + L
Sbjct: 237 RELRMQGINFSGADLSKLDLRYINFKQANFHNADLSGANLASC-----SLERADLSKAVL 291
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNT 158
N G+ + N G +R CN GLR CN G+ L GG+ LR
Sbjct: 292 EGANLQGVKMVCANLEGASMRGCNFEDPTGLRANMEGCNMKGVDLECSQMGGVNLRVATL 351
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 204
L+NCN LR G L NCN G L++ N G ++
Sbjct: 352 KNASLQNCN-----LRGAILAGTDLENCNLTGCDLQDANLRGANVK 392
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 60/166 (36%), Gaps = 15/166 (9%)
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
R G+ + L LR N N + G L +C L + L
Sbjct: 237 RELRMQGINFSGADLSKLDLRYINFKQANFHNADLSGANLASC-----SLERADLSKAVL 291
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNT 168
N G+ + N G +R CN GLR CN G+ L GG+ LR
Sbjct: 292 EGANLQGVKMVCANLEGASMRGCNFEDPTGLRANMEGCNMKGVDLECSQMGGVNLRVATL 351
Query: 169 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
L+NCN LR G L NCN G L++ N G ++
Sbjct: 352 KNASLQNCN-----LRGAILAGTDLENCNLTGCDLQDANLRGANVK 392
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 60/166 (36%), Gaps = 15/166 (9%)
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
R G+ + L LR N N + G L +C L + L
Sbjct: 237 RELRMQGINFSGADLSKLDLRYINFKQANFHNADLSGANLASC-----SLERADLSKAVL 291
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNT 178
N G+ + N G +R CN GLR CN G+ L GG+ LR
Sbjct: 292 EGANLQGVKMVCANLEGASMRGCNFEDPTGLRANMEGCNMKGVDLECSQMGGVNLRVATL 351
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
L+NCN LR G L NCN G L++ N G ++
Sbjct: 352 KNASLQNCN-----LRGAILAGTDLENCNLTGCDLQDANLRGANVK 392
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 58/154 (37%), Gaps = 15/154 (9%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A +S LR N N + G L +C L + L N G+ +
Sbjct: 249 ADLSKLDLRYINFKQANFHNADLSGANLASC-----SLERADLSKAVLEGANLQGVKMVC 303
Query: 66 CNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
N G +R CN GLR CN G+ L GG+ LR L+NCN
Sbjct: 304 ANLEGASMRGCNFEDPTGLRANMEGCNMKGVDLECSQMGGVNLRVATLKNASLQNCN--- 360
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 154
LR G L NCN G L++ N G ++
Sbjct: 361 --LRGAILAGTDLENCNLTGCDLQDANLRGANVK 392
>gi|298526823|ref|ZP_07014232.1| PPE Family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496617|gb|EFI31911.1| PPE Family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 374
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 234 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 293
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 294 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 353
Query: 164 RNCNTGGLGLRNCNTG 179
NTGG C G
Sbjct: 354 GEANTGGFNPGQCQHG 369
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 234 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 293
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 294 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 353
Query: 184 RNCNTGGLGLRNCNTG 199
NTGG C G
Sbjct: 354 GEANTGGFNPGQCQHG 369
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 234 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 293
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 294 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 353
Query: 204 RNCNTGGLGLRNCNTG 219
NTGG C G
Sbjct: 354 GEANTGGFNPGQCQHG 369
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 234 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 293
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 213
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 294 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 353
Query: 214 RNCNTGGLGLRNCNTG 229
NTGG C G
Sbjct: 354 GEANTGGFNPGQCQHG 369
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 166
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 234 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 293
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 223
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 294 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 353
Query: 224 RNCNTGGLGLRNCNTG 239
NTGG C G
Sbjct: 354 GEANTGGFNPGQCQHG 369
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 237 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 296
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 297 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 356
Query: 127 NTGGLGLRNCNTG 139
NTGG C G
Sbjct: 357 NTGGFNPGQCQHG 369
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 64/148 (43%), Gaps = 10/148 (6%)
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 168
+GL N G G N GL N G +G N +G G+GL N G G N +
Sbjct: 231 MGLGNIGFGNAGSYN-----FGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGS 285
Query: 169 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 225
G +GL N TG +G N TG G+ N + G+ N GL N NTG + +
Sbjct: 286 GNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGS 345
Query: 226 CNTGGLGLRNCNTGGLIVPKSKRGAQEN 253
NTG NTGG + + G E+
Sbjct: 346 YNTGSFNAGEANTGGFNPGQCQHGLVEH 373
>gi|15840574|ref|NP_335611.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13880753|gb|AAK45425.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
Length = 636
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 91/257 (35%), Gaps = 27/257 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 72
N G N G + + N G +G N LG+ N LG+ N N G+G
Sbjct: 308 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 367
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 129
L N G+G N G LG N +GL N +G N G N NTG
Sbjct: 368 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 427
Query: 130 -------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
G N +G G N G N +G+ N NTG NTG
Sbjct: 428 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 487
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTG 229
L + NTG + NTGG + NTG G N TG G N
Sbjct: 488 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 547
Query: 230 GLGLRNCNTGGLIVPKS 246
G +N NTG + S
Sbjct: 548 NSGFQNTNTGAFFIGHS 564
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 83/226 (36%), Gaps = 5/226 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G GL N G G N + G N + +G N + +G N LG+ N
Sbjct: 292 GNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGN 351
Query: 79 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 352 NNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNS 411
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G N G N G N +G G N G N +G+ N
Sbjct: 412 GDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNS 471
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 472 GAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 517
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 82/226 (36%), Gaps = 5/226 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N + +G N
Sbjct: 284 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNN 343
Query: 81 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N LG+ N N G+GL N G+G N G LG N +GL N
Sbjct: 344 LGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGN 403
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+G N G N G N G N +G G N G N
Sbjct: 404 NNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGF 463
Query: 199 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+G+ N NTG NTG L + NTG + NTGG
Sbjct: 464 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGF 509
>gi|148822348|ref|YP_001287102.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|253799824|ref|YP_003032825.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|254364039|ref|ZP_04980085.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|289744879|ref|ZP_06504257.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|308376637|ref|ZP_07439489.2| PPE family protein [Mycobacterium tuberculosis SUMu008]
gi|308377638|ref|ZP_07479866.2| PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308378848|ref|ZP_07484053.2| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|375297065|ref|YP_005101332.1| hypothetical protein TBSG_02864 [Mycobacterium tuberculosis KZN
4207]
gi|392433273|ref|YP_006474317.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|422812116|ref|ZP_16860504.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|134149553|gb|EBA41598.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|148720875|gb|ABR05500.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|253321327|gb|ACT25930.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289685407|gb|EFD52895.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|308350505|gb|EFP39356.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
gi|308355153|gb|EFP44004.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308359107|gb|EFP47958.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|323720417|gb|EGB29511.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|328459570|gb|AEB04993.1| hypothetical protein TBSG_02864 [Mycobacterium tuberculosis KZN
4207]
gi|392054682|gb|AFM50240.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 636
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 91/257 (35%), Gaps = 27/257 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 72
N G N G + + N G +G N LG+ N LG+ N N G+G
Sbjct: 308 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 367
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 129
L N G+G N G LG N +GL N +G N G N NTG
Sbjct: 368 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 427
Query: 130 -------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
G N +G G N G N +G+ N NTG NTG
Sbjct: 428 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 487
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTG 229
L + NTG + NTGG + NTG G N TG G N
Sbjct: 488 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 547
Query: 230 GLGLRNCNTGGLIVPKS 246
G +N NTG + S
Sbjct: 548 NSGFQNTNTGAFFIGHS 564
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 83/226 (36%), Gaps = 5/226 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G GL N G G N + G N + +G N + +G N LG+ N
Sbjct: 292 GNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGN 351
Query: 79 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 352 NNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNS 411
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G N G N G N +G G N G N +G+ N
Sbjct: 412 GDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNS 471
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 472 GAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 517
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 82/226 (36%), Gaps = 5/226 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N + +G N
Sbjct: 284 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNN 343
Query: 81 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N LG+ N N G+GL N G+G N G LG N +GL N
Sbjct: 344 LGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGN 403
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+G N G N G N G N +G G N G N
Sbjct: 404 NNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGF 463
Query: 199 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+G+ N NTG NTG L + NTG + NTGG
Sbjct: 464 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGF 509
>gi|434394476|ref|YP_007129423.1| pentapeptide repeat protein [Gloeocapsa sp. PCC 7428]
gi|428266317|gb|AFZ32263.1| pentapeptide repeat protein [Gloeocapsa sp. PCC 7428]
Length = 183
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 59/152 (38%), Gaps = 9/152 (5%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRN---------CNTGGLGLRNCNTGGLGLRNCNTGGLG 52
P VA T+ + T ++ CN G L++ N G L+ N G
Sbjct: 31 PQAVAQSPTQSVAQAPTQSSEVQRLLNTRQCPGCNLSGADLQDANLEGANLQGANLQGAN 90
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
L++ + LR+ N LR+ + L+ N G L++ + L+N N
Sbjct: 91 LQSADLDQANLRDANLQQANLRDADLEEADLQGANLSGANLQSADLEEANLQNANFQNAN 150
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 144
L+N + ++ N G L+ + G LR
Sbjct: 151 LQNADLEDARVQGANFDGANLQGADLEGTNLR 182
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 46 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
CN G L++ N G L+ N G L++ + LR+ N LR+ + L+
Sbjct: 64 CNLSGADLQDANLEGANLQGANLQGANLQSADLDQANLRDANLQQANLRDADLEEADLQG 123
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
N G L++ + L+N N L+N + ++ N G L+ + G LR
Sbjct: 124 ANLSGANLQSADLEEANLQNANFQNANLQNADLEDARVQGANFDGANLQGADLEGTNLR 182
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
CN G L++ N G L+ N G L++ + LR+ N LR+ + L+
Sbjct: 64 CNLSGADLQDANLEGANLQGANLQGANLQSADLDQANLRDANLQQANLRDADLEEADLQG 123
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G L++ + L+N N L+N + ++ N G L+ + G LR
Sbjct: 124 ANLSGANLQSADLEEANLQNANFQNANLQNADLEDARVQGANFDGANLQGADLEGTNLR 182
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
CN G L++ N G L+ N G L++ + LR+ N LR+ + L+
Sbjct: 64 CNLSGADLQDANLEGANLQGANLQGANLQSADLDQANLRDANLQQANLRDADLEEADLQG 123
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N G L++ + L+N N L+N + ++ N G L+ + G LR
Sbjct: 124 ANLSGANLQSADLEEANLQNANFQNANLQNADLEDARVQGANFDGANLQGADLEGTNLR 182
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
CN G L++ N G L+ N G L++ + LR+ N LR+ + L+
Sbjct: 64 CNLSGADLQDANLEGANLQGANLQGANLQSADLDQANLRDANLQQANLRDADLEEADLQG 123
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
N G L++ + L+N N L+N + ++ N G L+ + G LR
Sbjct: 124 ANLSGANLQSADLEEANLQNANFQNANLQNADLEDARVQGANFDGANLQGADLEGTNLR 182
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
CN G L++ N G L+ N G L++ + LR+ N LR+ + L+
Sbjct: 64 CNLSGADLQDANLEGANLQGANLQGANLQSADLDQANLRDANLQQANLRDADLEEADLQG 123
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 204
N G L++ + L+N N L+N + ++ N G L+ + G LR
Sbjct: 124 ANLSGANLQSADLEEANLQNANFQNANLQNADLEDARVQGANFDGANLQGADLEGTNLR 182
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
CN G L++ N G L+ N G L++ + LR+ N LR+ + L+
Sbjct: 64 CNLSGADLQDANLEGANLQGANLQGANLQSADLDQANLRDANLQQANLRDADLEEADLQG 123
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
N G L++ + L+N N L+N + ++ N G L+ + G LR
Sbjct: 124 ANLSGANLQSADLEEANLQNANFQNANLQNADLEDARVQGANFDGANLQGADLEGTNLR 182
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
CN G L++ N G L+ N G L++ + LR+ N LR+ + L+
Sbjct: 64 CNLSGADLQDANLEGANLQGANLQGANLQSADLDQANLRDANLQQANLRDADLEEADLQG 123
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
N G L++ + L+N N L+N + ++ N G L+ + G LR
Sbjct: 124 ANLSGANLQSADLEEANLQNANFQNANLQNADLEDARVQGANFDGANLQGADLEGTNLR 182
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%)
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
CN G L++ N G L+ N G L++ + LR+ N LR+ + L+
Sbjct: 64 CNLSGADLQDANLEGANLQGANLQGANLQSADLDQANLRDANLQQANLRDADLEEADLQG 123
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
N G L++ + L+N N L+N + ++ N G L+ + G LR
Sbjct: 124 ANLSGANLQSADLEEANLQNANFQNANLQNADLEDARVQGANFDGANLQGADLEGTNLR 182
>gi|183983645|ref|YP_001851936.1| PPE family protein [Mycobacterium marinum M]
gi|183176971|gb|ACC42081.1| PPE family protein [Mycobacterium marinum M]
Length = 636
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 100/241 (41%), Gaps = 10/241 (4%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
+G N +G +G N +G G +N +G +G N G +G N +G +G N +G
Sbjct: 271 QGDFNLGSGNIGNLNLGSGNFGSQNLGSGNIGSINFGVGNIGNTNIGSGNIGDTNFGSGN 330
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTG----GLGLRNCNTGGLGLRNCNTGGLGL 123
+G N +G G N G G N NTG G GL G+G N +G +GL
Sbjct: 331 IGSLNFGSGNSGSNNIGFGNFGSSNFGFGNTGNNNIGFGLTGDGQFGIGGLNSGSGNIGL 390
Query: 124 RNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
N +G N +G LG N NTG + NTG + NTG N G
Sbjct: 391 FNSGDNNIGFFNSGSGNLGFGNAGNSNTGFGNAGDVNTGFWNGGSINTGVGHAGATNFGF 450
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
N N G N NT + NTG L N N+G N NTG + NTGG
Sbjct: 451 FDSGNYNAGSFNAGNSNTSFGNSGDVNTGFLNAGNINSGFGNAGNVNTGWANAGDINTGG 510
Query: 241 L 241
Sbjct: 511 F 511
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
P +G+ N G +G N +G +G N +G +G N +G +G N G G N
Sbjct: 218 PAPLQGI-NLGFGNIGSLNLGSGNIGDGNLGSGNIGNINFGSGNIGGTNLGGGNQGDFNL 276
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+G +G N +G G +N +G +G N G +G N +G +G N +G +G N
Sbjct: 277 GSGNIGNLNLGSGNFGSQNLGSGNIGSINFGVGNIGNTNIGSGNIGDTNFGSGNIGSLNF 336
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
+G G N G G N G G N G GL G+G N +G +GL N
Sbjct: 337 GSGNSGSNNIGFGNFGSSNFGFGNTGNNNI---GFGLTGDGQFGIGGLNSGSGNIGLFNS 393
Query: 187 NTGGLGLRNCNTGGLGLRNC 206
+G N +G LG N
Sbjct: 394 GDNNIGFFNSGSGNLGFGNA 413
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 82/188 (43%), Gaps = 3/188 (1%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 88
G +G N +G +G N +G +G N +G +G N G G N +G +G N +
Sbjct: 229 GNIGSLNLGSGNIGDGNLGSGNIGNINFGSGNIGGTNLGGGNQGDFNLGSGNIGNLNLGS 288
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 148
G G +N +G +G N G +G N +G +G N +G +G N +G G N
Sbjct: 289 GNFGSQNLGSGNIGSINFGVGNIGNTNIGSGNIGDTNFGSGNIGSLNFGSGNSGSNNIGF 348
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
G G N G G N G GL G+G N +G +GL N +G N +
Sbjct: 349 GNFGSSNFGFGNTGNNNI---GFGLTGDGQFGIGGLNSGSGNIGLFNSGDNNIGFFNSGS 405
Query: 209 GGLGLRNC 216
G LG N
Sbjct: 406 GNLGFGNA 413
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 98/234 (41%), Gaps = 10/234 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G +G N G G N +G +G N +G G +
Sbjct: 235 NLGSGNIGDGNLGSGNIGNINFGSGNIGGTNLGGGNQGDFNLGSGNIGNLNLGSGNFGSQ 294
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
N +G +G N G +G N +G +G N +G +G N +G G N G G
Sbjct: 295 NLGSGNIGSINFGVGNIGNTNIGSGNIGDTNFGSGNIGSLNFGSGNSGSNNIGFGNFGSS 354
Query: 135 NC---NTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 186
N NTG G GL G+G N +G +GL N +G N +G LG N
Sbjct: 355 NFGFGNTGNNNIGFGLTGDGQFGIGGLNSGSGNIGLFNSGDNNIGFFNSGSGNLGFGNAG 414
Query: 187 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
NTG + NTG + NTG N G N N G N NT
Sbjct: 415 NSNTGFGNAGDVNTGFWNGGSINTGVGHAGATNFGFFDSGNYNAGSFNAGNSNT 468
>gi|340058245|emb|CCC52599.1| putative nucleoporin [Trypanosoma vivax Y486]
Length = 1436
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 60/146 (41%), Gaps = 4/146 (2%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
P ++ G +GG G + TGG G G TGG G + +GG G
Sbjct: 8 PAASGGFGQAASGGFGQASGATGGFGQPAAGGGFGQAGRGMTGGFG-QPAASGGFG--QA 64
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+GG G + TGG G + TGG G G TGG G + TG G +
Sbjct: 65 ASGGFGQPSGTTGGFGQASGATGGFGQPAAAGGFGQAGRGTTGGFGQPSGTTGVFGQPSG 124
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLG 152
TGG G + TGG G + GG G
Sbjct: 125 TTGGFGQASGATGGFG-QPTAAGGFG 149
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 88/222 (39%), Gaps = 13/222 (5%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 77
TGG G + +GG G +GG G + TGG G G TGG G +
Sbjct: 2 TGGFG-QPAASGGFG--QAASGGFGQASGATGGFGQPAAGGGFGQAGRGMTGGFG-QPAA 57
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
+GG G +GG G + TGG G + TGG G G TGG G +
Sbjct: 58 SGGFG--QAASGGFGQPSGTTGGFGQASGATGGFGQPAAAGGFGQAGRGTTGGFGQPSGT 115
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLGLRNC 196
TG G + TGG G + TGG G + GG G TGG G G +
Sbjct: 116 TGVFGQPSGTTGGFGQASGATGGFG-QPTAAGGFGQAGRGTTGGFGQPAAGGGFGQAASG 174
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G G TGG G + +GG G +GG G + T
Sbjct: 175 GFGQAG--RGTTGGFG-QPAASGGFG--QAASGGFGQASGTT 211
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 60/144 (41%), Gaps = 6/144 (4%)
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
TGG G + +GG G +GG G + TGG G G TGG G +
Sbjct: 2 TGGFG-QPAASGGFG--QAASGGFGQASGATGGFGQPAAGGGFGQAGRGMTGGFG-QPAA 57
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
+GG G +GG G + TGG G + TGG G G TGG G +
Sbjct: 58 SGGFG--QAASGGFGQPSGTTGGFGQASGATGGFGQPAAAGGFGQAGRGTTGGFGQPSGT 115
Query: 218 TGGLGLRNCNTGGLGLRNCNTGGL 241
TG G + TGG G + TGG
Sbjct: 116 TGVFGQPSGTTGGFGQASGATGGF 139
>gi|46202237|ref|ZP_00053526.2| COG1357: Uncharacterized low-complexity proteins [Magnetospirillum
magnetotacticum MS-1]
Length = 542
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 62/170 (36%), Gaps = 1/170 (0%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
LR N G+ L LR G LR+CN L + + G L+ N G
Sbjct: 36 LRGANLAGMDLSGSLLSLANLRKAVLSGANLRDCNLPRACLEDADLSGAKLQGANLAGAT 95
Query: 153 LRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
L N G +R N G L + G+ L N G L N G L N G
Sbjct: 96 LLRANFSGANMRMANLAGANLAGKMDLSGVDLTGANLAGAKLMGANFSGATLAGANLAGA 155
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEP 261
RN N G L + T G L N G ++ ++ Q + E EP
Sbjct: 156 DARNANFTGADLTDAVTAGTLLDGANMSGAVIRRTAGRPQTIVADLEPEP 205
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 51/138 (36%), Gaps = 1/138 (0%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S LR G LR+CN L + + G L+ N G L N G +R N
Sbjct: 51 LSLANLRKAVLSGANLRDCNLPRACLEDADLSGAKLQGANLAGATLLRANFSGANMRMAN 110
Query: 68 TGGLGLR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G L + G+ L N G L N G L N G RN N G L +
Sbjct: 111 LAGANLAGKMDLSGVDLTGANLAGAKLMGANFSGATLAGANLAGADARNANFTGADLTDA 170
Query: 127 NTGGLGLRNCNTGGLGLR 144
T G L N G +R
Sbjct: 171 VTAGTLLDGANMSGAVIR 188
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
LR G LR+CN L + + G L+ N G L N G +R N G
Sbjct: 56 LRKAVLSGANLRDCNLPRACLEDADLSGAKLQGANLAGATLLRANFSGANMRMANLAGAN 115
Query: 83 LR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
L + G+ L N G L N G L N G RN N G L + T G
Sbjct: 116 LAGKMDLSGVDLTGANLAGAKLMGANFSGATLAGANLAGADARNANFTGADLTDAVTAGT 175
Query: 142 GLRNCNTGGLGLR 154
L N G +R
Sbjct: 176 LLDGANMSGAVIR 188
>gi|31792329|ref|NP_854822.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|57116833|ref|YP_177790.1| PPE family protein PPE16 [Mycobacterium tuberculosis H37Rv]
gi|121637067|ref|YP_977290.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148660921|ref|YP_001282444.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|224989540|ref|YP_002644227.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|254231408|ref|ZP_04924735.1| PPE family protein [Mycobacterium tuberculosis C]
gi|254550133|ref|ZP_05140580.1| PPE family protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289442565|ref|ZP_06432309.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289749672|ref|ZP_06509050.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289761275|ref|ZP_06520653.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|297633675|ref|ZP_06951455.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297730662|ref|ZP_06959780.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|307079120|ref|ZP_07488290.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|307083684|ref|ZP_07492797.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|313657992|ref|ZP_07814872.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|378770901|ref|YP_005170634.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|385997919|ref|YP_005916217.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|392385838|ref|YP_005307467.1| PPE16 [Mycobacterium tuberculosis UT205]
gi|397672970|ref|YP_006514505.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|449063196|ref|YP_007430279.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|81415785|sp|Q79FS0.1|PPE16_MYCTU RecName: Full=Uncharacterized PPE family protein PPE16; Flags:
Precursor
gi|31617917|emb|CAD94027.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121492714|emb|CAL71183.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124600467|gb|EAY59477.1| PPE family protein [Mycobacterium tuberculosis C]
gi|148505073|gb|ABQ72882.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|224772653|dbj|BAH25459.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|289415484|gb|EFD12724.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289690259|gb|EFD57688.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289708781|gb|EFD72797.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|308363027|gb|EFP51878.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308366677|gb|EFP55528.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|341601083|emb|CCC63755.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|344218965|gb|AEM99595.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|356593222|gb|AET18451.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|378544389|emb|CCE36663.1| PPE16 [Mycobacterium tuberculosis UT205]
gi|395137875|gb|AFN49034.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444894634|emb|CCP43889.1| PPE family protein PPE16 [Mycobacterium tuberculosis H37Rv]
gi|449031704|gb|AGE67131.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 618
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 91/257 (35%), Gaps = 27/257 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 72
N G N G + + N G +G N LG+ N LG+ N N G+G
Sbjct: 290 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 349
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 129
L N G+G N G LG N +GL N +G N G N NTG
Sbjct: 350 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 409
Query: 130 -------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
G N +G G N G N +G+ N NTG NTG
Sbjct: 410 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 469
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTG 229
L + NTG + NTGG + NTG G N TG G N
Sbjct: 470 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 529
Query: 230 GLGLRNCNTGGLIVPKS 246
G +N NTG + S
Sbjct: 530 NSGFQNTNTGAFFIGHS 546
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 83/226 (36%), Gaps = 5/226 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G GL N G G N + G N + +G N + +G N LG+ N
Sbjct: 274 GNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGN 333
Query: 79 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 334 NNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNS 393
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G N G N G N +G G N G N +G+ N
Sbjct: 394 GDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNS 453
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 454 GAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 499
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 82/226 (36%), Gaps = 5/226 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N + +G N
Sbjct: 266 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNN 325
Query: 81 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N LG+ N N G+GL N G+G N G LG N +GL N
Sbjct: 326 LGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGN 385
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+G N G N G N G N +G G N G N
Sbjct: 386 NNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGF 445
Query: 199 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+G+ N NTG NTG L + NTG + NTGG
Sbjct: 446 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGF 491
>gi|340626147|ref|YP_004744599.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004337|emb|CCC43480.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length = 618
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 91/257 (35%), Gaps = 27/257 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 72
N G N G + + N G +G N LG+ N LG+ N N G+G
Sbjct: 290 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 349
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 129
L N G+G N G LG N +GL N +G N G N NTG
Sbjct: 350 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 409
Query: 130 -------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
G N +G G N G N +G+ N NTG NTG
Sbjct: 410 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 469
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTG 229
L + NTG + NTGG + NTG G N TG G N
Sbjct: 470 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 529
Query: 230 GLGLRNCNTGGLIVPKS 246
G +N NTG + S
Sbjct: 530 NSGFQNTNTGAFFIGHS 546
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 83/226 (36%), Gaps = 5/226 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G GL N G G N + G N + +G N + +G N LG+ N
Sbjct: 274 GNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGN 333
Query: 79 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 334 NNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNS 393
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G N G N G N +G G N G N +G+ N
Sbjct: 394 GDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNS 453
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 454 GAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 499
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 82/226 (36%), Gaps = 5/226 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N + +G N
Sbjct: 266 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNN 325
Query: 81 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N LG+ N N G+GL N G+G N G LG N +GL N
Sbjct: 326 LGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGN 385
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+G N G N G N G N +G G N G N
Sbjct: 386 NNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGF 445
Query: 199 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+G+ N NTG NTG L + NTG + NTGG
Sbjct: 446 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGF 491
>gi|83310097|ref|YP_420361.1| hypothetical protein amb0998 [Magnetospirillum magneticum AMB-1]
gi|82944938|dbj|BAE49802.1| Uncharacterized low-complexity protein [Magnetospirillum magneticum
AMB-1]
Length = 542
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 62/170 (36%), Gaps = 1/170 (0%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
LR N G+ L LR G LR+CN L + + G L+ N G
Sbjct: 36 LRGANLAGMDLSGSLLSLANLRKAVLSGANLRDCNLPRACLEDADLSGAKLQGANLAGAT 95
Query: 153 LRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
L N G +R N G L + G+ L N G L N G L N G
Sbjct: 96 LLRANFSGANMRMANLAGANLAGKMDLSGVDLTGANLAGAKLMGANFSGATLAGANLAGA 155
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEP 261
RN N G L + T G L N G ++ ++ Q + E EP
Sbjct: 156 DARNANFTGADLTDAVTAGALLDGANMSGAVIRRTAGRPQTIVADLEPEP 205
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 51/138 (36%), Gaps = 1/138 (0%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S LR G LR+CN L + + G L+ N G L N G +R N
Sbjct: 51 LSLANLRKAVLSGANLRDCNLPRACLEDADLSGAKLQGANLAGATLLRANFSGANMRMAN 110
Query: 68 TGGLGLR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G L + G+ L N G L N G L N G RN N G L +
Sbjct: 111 LAGANLAGKMDLSGVDLTGANLAGAKLMGANFSGATLAGANLAGADARNANFTGADLTDA 170
Query: 127 NTGGLGLRNCNTGGLGLR 144
T G L N G +R
Sbjct: 171 VTAGALLDGANMSGAVIR 188
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
LR G LR+CN L + + G L+ N G L N G +R N G
Sbjct: 56 LRKAVLSGANLRDCNLPRACLEDADLSGAKLQGANLAGATLLRANFSGANMRMANLAGAN 115
Query: 83 LR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
L + G+ L N G L N G L N G RN N G L + T G
Sbjct: 116 LAGKMDLSGVDLTGANLAGAKLMGANFSGATLAGANLAGADARNANFTGADLTDAVTAGA 175
Query: 142 GLRNCNTGGLGLR 154
L N G +R
Sbjct: 176 LLDGANMSGAVIR 188
>gi|452962545|gb|EME67671.1| hypothetical protein H261_22313 [Magnetospirillum sp. SO-1]
Length = 542
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 62/170 (36%), Gaps = 1/170 (0%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
LR N G+ L LR G LR+CN L + + G L+ N G
Sbjct: 36 LRGANLAGMDLSGSLLSLANLRKAVLSGANLRDCNLPRACLEDADLSGAKLQGANLAGAT 95
Query: 153 LRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
L N G +R N G L + G+ L N G L N G L N G
Sbjct: 96 LLRANFSGANMRMANLAGANLAGKMDLSGVDLTGANLAGAKLMGANFSGATLAGANLAGA 155
Query: 212 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEP 261
RN N G L + T G L N G ++ ++ Q + E EP
Sbjct: 156 DARNANFTGADLTDAVTAGALLDGANMSGAVIRRTAGRPQTIVADLEPEP 205
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 51/138 (36%), Gaps = 1/138 (0%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S LR G LR+CN L + + G L+ N G L N G +R N
Sbjct: 51 LSLANLRKAVLSGANLRDCNLPRACLEDADLSGAKLQGANLAGATLLRANFSGANMRMAN 110
Query: 68 TGGLGLR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G L + G+ L N G L N G L N G RN N G L +
Sbjct: 111 LAGANLAGKMDLSGVDLTGANLAGAKLMGANFSGATLAGANLAGADARNANFTGADLTDA 170
Query: 127 NTGGLGLRNCNTGGLGLR 144
T G L N G +R
Sbjct: 171 VTAGALLDGANMSGAVIR 188
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
LR G LR+CN L + + G L+ N G L N G +R N G
Sbjct: 56 LRKAVLSGANLRDCNLPRACLEDADLSGAKLQGANLAGATLLRANFSGANMRMANLAGAN 115
Query: 83 LR-NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
L + G+ L N G L N G L N G RN N G L + T G
Sbjct: 116 LAGKMDLSGVDLTGANLAGAKLMGANFSGATLAGANLAGADARNANFTGADLTDAVTAGA 175
Query: 142 GLRNCNTGGLGLR 154
L N G +R
Sbjct: 176 LLDGANMSGAVIR 188
>gi|289569131|ref|ZP_06449358.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289542885|gb|EFD46533.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 618
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 91/257 (35%), Gaps = 27/257 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 72
N G N G + + N G +G N LG+ N LG+ N N G+G
Sbjct: 290 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 349
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 129
L N G+G N G LG N +GL N +G N G N NTG
Sbjct: 350 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 409
Query: 130 -------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
G N +G G N G N +G+ N NTG NTG
Sbjct: 410 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 469
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTG 229
L + NTG + NTGG + NTG G N TG G N
Sbjct: 470 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 529
Query: 230 GLGLRNCNTGGLIVPKS 246
G +N NTG + S
Sbjct: 530 NSGFQNTNTGAFFIGHS 546
Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 83/226 (36%), Gaps = 5/226 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G GL N G G N + G N + +G N + +G N LG+ N
Sbjct: 274 GNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGN 333
Query: 79 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 334 NNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNS 393
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G N G N G N +G G N G N +G+ N
Sbjct: 394 GDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNS 453
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 454 GAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 499
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 82/226 (36%), Gaps = 5/226 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N + +G N
Sbjct: 266 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNN 325
Query: 81 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N LG+ N N G+GL N G+G N G LG N +GL N
Sbjct: 326 LGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGN 385
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+G N G N G N G N +G G N G N
Sbjct: 386 NNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGF 445
Query: 199 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+G+ N NTG NTG L + NTG + NTGG
Sbjct: 446 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGF 491
>gi|308231748|ref|ZP_07413627.2| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308370051|ref|ZP_07420132.2| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308370629|ref|ZP_07422169.2| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308371878|ref|ZP_07426531.2| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308373048|ref|ZP_07430840.2| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308374226|ref|ZP_07435245.2| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308375374|ref|ZP_07443671.2| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|424946879|ref|ZP_18362575.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
gi|308216221|gb|EFO75620.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308325437|gb|EFP14288.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308331410|gb|EFP20261.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308335220|gb|EFP24071.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308339028|gb|EFP27879.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308342696|gb|EFP31547.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308346582|gb|EFP35433.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|358231394|dbj|GAA44886.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
gi|379027341|dbj|BAL65074.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 619
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 91/257 (35%), Gaps = 27/257 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 72
N G N G + + N G +G N LG+ N LG+ N N G+G
Sbjct: 291 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 350
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 129
L N G+G N G LG N +GL N +G N G N NTG
Sbjct: 351 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 410
Query: 130 -------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
G N +G G N G N +G+ N NTG NTG
Sbjct: 411 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 470
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTG 229
L + NTG + NTGG + NTG G N TG G N
Sbjct: 471 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 530
Query: 230 GLGLRNCNTGGLIVPKS 246
G +N NTG + S
Sbjct: 531 NSGFQNTNTGAFFIGHS 547
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 83/226 (36%), Gaps = 5/226 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G GL N G G N + G N + +G N + +G N LG+ N
Sbjct: 275 GNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGN 334
Query: 79 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 335 NNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNS 394
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G N G N G N +G G N G N +G+ N
Sbjct: 395 GDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNS 454
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 455 GAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 500
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 82/226 (36%), Gaps = 5/226 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N + +G N
Sbjct: 267 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNN 326
Query: 81 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N LG+ N N G+GL N G+G N G LG N +GL N
Sbjct: 327 LGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGN 386
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+G N G N G N G N +G G N G N
Sbjct: 387 NNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGF 446
Query: 199 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+G+ N NTG NTG L + NTG + NTGG
Sbjct: 447 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGF 492
>gi|289753201|ref|ZP_06512579.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289693788|gb|EFD61217.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length = 522
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 91/257 (35%), Gaps = 27/257 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 72
N G N G + + N G +G N LG+ N LG+ N N G+G
Sbjct: 194 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 253
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 129
L N G+G N G LG N +GL N +G N G N NTG
Sbjct: 254 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 313
Query: 130 -------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
G N +G G N G N +G+ N NTG NTG
Sbjct: 314 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 373
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTG 229
L + NTG + NTGG + NTG G N TG G N
Sbjct: 374 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 433
Query: 230 GLGLRNCNTGGLIVPKS 246
G +N NTG + S
Sbjct: 434 NSGFQNTNTGAFFIGHS 450
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 83/226 (36%), Gaps = 5/226 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G GL N G G N + G N + +G N + +G N LG+ N
Sbjct: 178 GNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGN 237
Query: 79 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 238 NNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNS 297
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G N G N G N +G G N G N +G+ N
Sbjct: 298 GDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNS 357
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 358 GAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 403
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 82/226 (36%), Gaps = 5/226 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N + +G N
Sbjct: 170 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNN 229
Query: 81 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N LG+ N N G+GL N G+G N G LG N +GL N
Sbjct: 230 LGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGN 289
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+G N G N G N G N +G G N G N
Sbjct: 290 NNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGF 349
Query: 199 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+G+ N NTG NTG L + NTG + NTGG
Sbjct: 350 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGF 395
>gi|433634192|ref|YP_007267819.1| Conserved protein of unknown function, PPE family, PPE16
[Mycobacterium canettii CIPT 140070017]
gi|432165785|emb|CCK63267.1| Conserved protein of unknown function, PPE family, PPE16
[Mycobacterium canettii CIPT 140070017]
Length = 618
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 91/257 (35%), Gaps = 27/257 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 72
N G N G + + N G +G N LG+ N LG+ N N G+G
Sbjct: 290 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 349
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 129
L N G+G N G LG N +GL N +G N G N NTG
Sbjct: 350 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 409
Query: 130 -------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
G N +G G N G N +G+ N NTG NTG
Sbjct: 410 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 469
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTG 229
L + NTG + NTGG + NTG G N TG G N
Sbjct: 470 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 529
Query: 230 GLGLRNCNTGGLIVPKS 246
G +N NTG + S
Sbjct: 530 NSGFQNTNTGAFFIGHS 546
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 83/226 (36%), Gaps = 5/226 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G GL N G G N + G N + +G N + +G N LG+ N
Sbjct: 274 GNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGN 333
Query: 79 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 334 NNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNS 393
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G N G N G N +G G N G N +G+ N
Sbjct: 394 GDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNS 453
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 454 GAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 499
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 82/226 (36%), Gaps = 5/226 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N + +G N
Sbjct: 266 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNN 325
Query: 81 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N LG+ N N G+GL N G+G N G LG N +GL N
Sbjct: 326 LGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGN 385
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+G N G N G N G N +G G N G N
Sbjct: 386 NNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGF 445
Query: 199 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+G+ N NTG NTG L + NTG + NTGG
Sbjct: 446 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGF 491
>gi|433630657|ref|YP_007264285.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070010]
gi|432162250|emb|CCK59624.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070010]
Length = 678
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G L + NTG + L N N G L L
Sbjct: 183 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNLGSANTGSVNLGNANIGDLNL 237
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG + NTG L N +G +G N G LG N +G G
Sbjct: 238 GSGNIGSYNLGGGNTGDFNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 294
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L L NTG NTG + N NTG G N +G +G N +
Sbjct: 295 TNFGGGNTGNLNLGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 354
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 355 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 414
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 321 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 380
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 381 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 439
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 440 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 499
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 500 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 548
>gi|381204843|ref|ZP_09911914.1| hypothetical protein SclubJA_04390 [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 214
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 67/195 (34%), Gaps = 11/195 (5%)
Query: 52 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
L G+ L N G LR N LR L+ + G LR + G
Sbjct: 26 DLSQAELNGIDLDMANLSGATLRKVNLNKSSLRQAT-----LKEASLVGADLRRVDLSGA 80
Query: 112 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
L N N G LR N G L G L N N G L + N G L G
Sbjct: 81 NLSNANLVGANLRKANLTGADL-----SGAKLSNANLTGAVLSSANLTGTNLLGVELIGA 135
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
L N G L+N N L N L N N G L + + LRN N
Sbjct: 136 KLERANARGAILKNANLSMTNLVLSNFTEADLSNANLSGAKLIDTDLTRATLRNANLSRK 195
Query: 232 GL-RNCNTGGLIVPK 245
L R T G+I P+
Sbjct: 196 QLCRVKTTLGIINPE 210
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 63/186 (33%), Gaps = 12/186 (6%)
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
L G+ L N G LR N LR L+ + G LR + G
Sbjct: 26 DLSQAELNGIDLDMANLSGATLRKVNLNKSSLRQAT-----LKEASLVGADLRRVDLSGA 80
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
L N N G LR N G L G L N N G L + N G L G
Sbjct: 81 NLSNANLVGANLRKANLTGADL-----SGAKLSNANLTGAVLSSANLTGTNLLGVELIGA 135
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LIVPKSKRGAQENASRSEN 259
L N G L+N N L N L N N G LI R NA+ S
Sbjct: 136 KLERANARGAILKNANLSMTNLVLSNFTEADLSNANLSGAKLIDTDLTRATLRNANLSRK 195
Query: 260 EPCLVK 265
+ C VK
Sbjct: 196 QLCRVK 201
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 59/176 (33%), Gaps = 10/176 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
L G+ L N G LR N LR L+ + G LR + G
Sbjct: 26 DLSQAELNGIDLDMANLSGATLRKVNLNKSSLRQAT-----LKEASLVGADLRRVDLSGA 80
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
L N N G LR N G L G L N N G L + N G L G
Sbjct: 81 NLSNANLVGANLRKANLTGADL-----SGAKLSNANLTGAVLSSANLTGTNLLGVELIGA 135
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
L N G L+N N L N L N N G L + + LRN N
Sbjct: 136 KLERANARGAILKNANLSMTNLVLSNFTEADLSNANLSGAKLIDTDLTRATLRNAN 191
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 59/176 (33%), Gaps = 10/176 (5%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
L G+ L N G LR N LR L+ + G LR + G
Sbjct: 26 DLSQAELNGIDLDMANLSGATLRKVNLNKSSLRQAT-----LKEASLVGADLRRVDLSGA 80
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
L N N G LR N G L G L N N G L + N G L G
Sbjct: 81 NLSNANLVGANLRKANLTGADL-----SGAKLSNANLTGAVLSSANLTGTNLLGVELIGA 135
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
L N G L+N N L N L N N G L + + LRN N
Sbjct: 136 KLERANARGAILKNANLSMTNLVLSNFTEADLSNANLSGAKLIDTDLTRATLRNAN 191
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 59/176 (33%), Gaps = 10/176 (5%)
Query: 32 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 91
L G+ L N G LR N LR L+ + G LR + G
Sbjct: 26 DLSQAELNGIDLDMANLSGATLRKVNLNKSSLRQAT-----LKEASLVGADLRRVDLSGA 80
Query: 92 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
L N N G LR N G L G L N N G L + N G L G
Sbjct: 81 NLSNANLVGANLRKANLTGADL-----SGAKLSNANLTGAVLSSANLTGTNLLGVELIGA 135
Query: 152 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
L N G L+N N L N L N N G L + + LRN N
Sbjct: 136 KLERANARGAILKNANLSMTNLVLSNFTEADLSNANLSGAKLIDTDLTRATLRNAN 191
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 59/176 (33%), Gaps = 10/176 (5%)
Query: 42 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
L G+ L N G LR N LR L+ + G LR + G
Sbjct: 26 DLSQAELNGIDLDMANLSGATLRKVNLNKSSLRQAT-----LKEASLVGADLRRVDLSGA 80
Query: 102 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
L N N G LR N G L G L N N G L + N G L G
Sbjct: 81 NLSNANLVGANLRKANLTGADL-----SGAKLSNANLTGAVLSSANLTGTNLLGVELIGA 135
Query: 162 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
L N G L+N N L N L N N G L + + LRN N
Sbjct: 136 KLERANARGAILKNANLSMTNLVLSNFTEADLSNANLSGAKLIDTDLTRATLRNAN 191
>gi|433630236|ref|YP_007263864.1| Conserved protein of unknown function, PPE family, PPE16
[Mycobacterium canettii CIPT 140070010]
gi|432161829|emb|CCK59181.1| Conserved protein of unknown function, PPE family, PPE16
[Mycobacterium canettii CIPT 140070010]
Length = 618
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 68/190 (35%), Gaps = 3/190 (1%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
G+G N G LG N +G N + +GL N G G N G N
Sbjct: 357 GIGALNSGVGNLGFGNSGNNNIGFFNSGSNNIGLFNSGDGNFGYFNSGDTNTGFGNAGFT 416
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 176
G N +G G N G N +G+ N NTG NTG L +
Sbjct: 417 NTGFGNAGSGNFGFGNAGNQNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGDF 476
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
NTG + NTGG + NTG + G N TG G N G +N
Sbjct: 477 NTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQNT 536
Query: 237 NTGGLIVPKS 246
NTG + S
Sbjct: 537 NTGAFFIGHS 546
>gi|359458784|ref|ZP_09247347.1| pentapeptide repeat-containing protein [Acaryochloris sp. CCMEE
5410]
Length = 339
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 69/215 (32%), Gaps = 10/215 (4%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
+K L N N LR+ L N L N LR+ N L N
Sbjct: 122 ESKDLCNVNLRAANLRDAILSSADLSGANLSWSDLCEANLSDAILRDANLILAMLERANL 181
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
G L N N LR N L + + G L N LR + G L N N
Sbjct: 182 NGANLSNAN-----LRTANLSYTNLSSADLFGADLFVANLSSANLREADFNGANLSNANL 236
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 188
L N N L N N G L + N LR N L N N G L N N
Sbjct: 237 DSADLSNAN-----LSNANLIGADLSHVNLSNASLRGSNFSNANLSNANLDGADLSNANF 291
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
G L N L + + L N G+ L
Sbjct: 292 RGTNLSGANLSNANLIDADLLDANLFNATLDGIDL 326
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 65/198 (32%), Gaps = 10/198 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A +S+ L N L N LR+ N L N G L N N LR
Sbjct: 139 AILSSADLSGANLSWSDLCEANLSDAILRDANLILAMLERANLNGANLSNAN-----LRT 193
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
N L + + G L N LR + G L N N L N N L N
Sbjct: 194 ANLSYTNLSSADLFGADLFVANLSSANLREADFNGANLSNANLDSADLSNAN-----LSN 248
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G L + N LR N L N N G L N N G L N L +
Sbjct: 249 ANLIGADLSHVNLSNASLRGSNFSNANLSNANLDGADLSNANFRGTNLSGANLSNANLID 308
Query: 186 CNTGGLGLRNCNTGGLGL 203
+ L N G+ L
Sbjct: 309 ADLLDANLFNATLDGIDL 326
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 64/203 (31%), Gaps = 15/203 (7%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 94
N N LR+ L N L N LR+ N L N G L
Sbjct: 128 NVNLRAANLRDAILSSADLSGANLSWSDLCEANLSDAILRDANLILAMLERANLNGANLS 187
Query: 95 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 154
N N LR N L + + G L N LR + G L N N L
Sbjct: 188 NAN-----LRTANLSYTNLSSADLFGADLFVANLSSANLREADFNGANLSNANLDSADLS 242
Query: 155 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
N N L N N G L + N LR N L N N G L N N R
Sbjct: 243 NAN-----LSNANLIGADLSHVNLSNASLRGSNFSNANLSNANLDGADLSNAN-----FR 292
Query: 215 NCNTGGLGLRNCNTGGLGLRNCN 237
N G L N N L + N
Sbjct: 293 GTNLSGANLSNANLIDADLLDAN 315
>gi|309792396|ref|ZP_07686863.1| pentapeptide repeat-containing protein [Oscillochloris trichoides
DG-6]
gi|308225551|gb|EFO79312.1| pentapeptide repeat-containing protein [Oscillochloris trichoides
DG6]
Length = 314
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 76/231 (32%), Gaps = 13/231 (5%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
+ A +S LR + L N G LR N N G L CN G+ L
Sbjct: 87 VRADLSDADLRKGDLAWANLEFANLTGANLRGANLSAADFSGANLYGANLSLCNLSGVDL 146
Query: 64 RNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
R+ G L L N N G L + GG ++ N G L + N
Sbjct: 147 RDTIMIGANLTEAQLREAQLVNLSGANLSGANLNKVSLGGASMQGVNLSGASLLSANLRE 206
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
LR N G L N L + L N G+ L N G L + N
Sbjct: 207 ATLREANLIGANLYEAN-----LSEADLSAADLSMANLSGIYLSGANLEGAILTHANLSR 261
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
L CN G L CN LR + L + G L C+ G+
Sbjct: 262 ANLSGCNLRGAQLNGCN-----LREASLADADLTGADLTGADLSECDLSGV 307
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 80/245 (32%), Gaps = 13/245 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A +S LR + + LR + L N G LR N
Sbjct: 69 ATLSWANLREARLAWTQMVRADLSDADLRKGDLAWANLEFANLTGANLRGANLSAADFSG 128
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLG 122
N G L CN G+ LR+ G L L N N G L + GG
Sbjct: 129 ANLYGANLSLCNLSGVDLRDTIMIGANLTEAQLREAQLVNLSGANLSGANLNKVSLGGAS 188
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
++ N G L + N LR N G L N L + L N G+
Sbjct: 189 MQGVNLSGASLLSANLREATLREANLIGANLYEAN-----LSEADLSAADLSMANLSGIY 243
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-TG----GLGLRNCN 237
L N G L + N L CN G L CN L + + TG G L C+
Sbjct: 244 LSGANLEGAILTHANLSRANLSGCNLRGAQLNGCNLREASLADADLTGADLTGADLSECD 303
Query: 238 TGGLI 242
G+I
Sbjct: 304 LSGVI 308
>gi|197122449|ref|YP_002134400.1| XGLTT repeat-containing protein [Anaeromyxobacter sp. K]
gi|196172298|gb|ACG73271.1| XGLTT repeat protein [Anaeromyxobacter sp. K]
Length = 437
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 68/166 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
NT GL NT G+ NT G+ NT GL NT G+ NT G+
Sbjct: 39 INTNGLVGNGINTNGINTNGINTNGINTNGINTNGLVGNGINTNGINTNGINTNGINTNG 98
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 99 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 158
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 159 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGI 204
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 68/166 (40%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
NT GL NT G+ NT G+ NT GL NT G+ NT G+
Sbjct: 39 INTNGLVGNGINTNGINTNGINTNGINTNGINTNGLVGNGINTNGINTNGINTNGINTNG 98
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 99 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 158
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 159 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGI 204
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 68/166 (40%)
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
NT GL NT G+ NT G+ NT GL NT G+ NT G+
Sbjct: 39 INTNGLVGNGINTNGINTNGINTNGINTNGINTNGLVGNGINTNGINTNGINTNGINTNG 98
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 99 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 158
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 159 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGI 204
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Query: 46 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
NT G+ NT G+ NT GL NT G+ NT G+ NT G+
Sbjct: 54 INTNGI-----NTNGINTNGINTNGLVGNGINTNGINTNGINTNGINTNGINTNGINTNG 108
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 109 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 168
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NT G+ NT G+ NT G+ NT G+
Sbjct: 169 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 204
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
NT G+ NT G+ NT GL NT G+ NT G+ NT G+
Sbjct: 54 INTNGI-----NTNGINTNGINTNGLVGNGINTNGINTNGINTNGINTNGINTNGINTNG 108
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 109 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 168
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NT G+ NT G+ NT G+ NT G+
Sbjct: 169 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 204
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
NT G+ NT G+ NT GL NT G+ NT G+ NT G+
Sbjct: 54 INTNGI-----NTNGINTNGINTNGLVGNGINTNGINTNGINTNGINTNGINTNGINTNG 108
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 109 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 168
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NT G+ NT G+ NT G+ NT G+
Sbjct: 169 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 204
>gi|433634610|ref|YP_007268237.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
gi|432166203|emb|CCK63696.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
Length = 678
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 102/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G L + NTG + L N N G L L
Sbjct: 183 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNLGSANTGSVNLGNANIGDLNL 237
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 238 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 294
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 295 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 354
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 355 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 414
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 321 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 380
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 381 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 439
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 440 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 499
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 500 FNSGHTNTGSFNAGSINTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 548
>gi|298524632|ref|ZP_07012041.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298494426|gb|EFI29720.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 554
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 91/257 (35%), Gaps = 27/257 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 72
N G N G + + N G +G N LG+ N LG+ N N G+G
Sbjct: 226 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 285
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 129
L N G+G N G LG N +GL N +G N G N NTG
Sbjct: 286 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 345
Query: 130 -------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
G N +G G N G N +G+ N NTG NTG
Sbjct: 346 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 405
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTG 229
L + NTG + NTGG + NTG G N TG G N
Sbjct: 406 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 465
Query: 230 GLGLRNCNTGGLIVPKS 246
G +N NTG + S
Sbjct: 466 NSGFQNTNTGAFFIGHS 482
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 83/226 (36%), Gaps = 5/226 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G GL N G G N + G N + +G N + +G N LG+ N
Sbjct: 210 GNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGN 269
Query: 79 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 270 NNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNS 329
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G N G N G N +G G N G N +G+ N
Sbjct: 330 GDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNS 389
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 390 GAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 435
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 82/226 (36%), Gaps = 5/226 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N + +G N
Sbjct: 202 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNN 261
Query: 81 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N LG+ N N G+GL N G+G N G LG N +GL N
Sbjct: 262 LGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGN 321
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+G N G N G N G N +G G N G N
Sbjct: 322 NNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGF 381
Query: 199 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+G+ N NTG NTG L + NTG + NTGG
Sbjct: 382 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGF 427
>gi|1399945|gb|AAB03337.1| RNA helicase GLH-2 [Caenorhabditis elegans]
gi|1405387|gb|AAB03510.1| GLH-2 [Caenorhabditis elegans]
Length = 974
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 54/107 (50%)
Query: 47 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 106
N GG G + N GG G + N GG G + N GG G + N GG G + N GG G +
Sbjct: 72 NAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSG 131
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
N GG GL + N GG G + N GG G + N GG G + GG G
Sbjct: 132 NAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGF 178
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 54/107 (50%)
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
N GG G + N GG G + N GG G + N GG G + N GG G + N GG G +
Sbjct: 72 NAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSG 131
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N GG GL + N GG G + N GG G + N GG G + GG G
Sbjct: 132 NAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGF 178
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 54/107 (50%)
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
N GG G + N GG G + N GG G + N GG G + N GG G + N GG G +
Sbjct: 72 NAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSG 131
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
N GG GL + N GG G + N GG G + N GG G + GG G
Sbjct: 132 NAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGF 178
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 50/97 (51%)
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
N GG G + N GG G + N GG G + N GG G + N GG G + N GG G +
Sbjct: 72 NAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSG 131
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
N GG GL + N GG G + N GG G + N GG G
Sbjct: 132 NAGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGF 168
>gi|332708895|ref|ZP_08428866.1| uncharacterized low-complexity protein [Moorea producens 3L]
gi|332352437|gb|EGJ32006.1| uncharacterized low-complexity protein [Moorea producens 3L]
Length = 273
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 69/212 (32%), Gaps = 10/212 (4%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ TK +NCN GL L + G+ L+ N G L N L N G
Sbjct: 31 PLEQLRETKNCQNCNLAGLELSREDLQGVNLQKANLAGANLAGANLEKAYLVGVNLEGAN 90
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
L N N L N G LR N L N L N L + +
Sbjct: 91 LENAN-----LEKANLSGANLRRANLKNADLLRSNLTEANLEQANLQEAHLSYRSAKAIK 145
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
L N L N G+ L N L+ N + + + L + +
Sbjct: 146 LERANLREANLSKANLVGINLSGVNLEKANLQEANLADMEI----SASLPIDHYLVSA-N 200
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
LR N G L + G+ L + N L+
Sbjct: 201 LRGANLMGANLEQADLRGIDLSDANLSDASLK 232
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 58/189 (30%), Gaps = 20/189 (10%)
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+NCN GL L + G+ L+ N G L N L N G L N N L
Sbjct: 42 QNCNLAGLELSREDLQGVNLQKANLAGANLAGANLEKAYLVGVNLEGANLENAN-----L 96
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
N G LR N L N L N L + + L N L
Sbjct: 97 EKANLSGANLRRANLKNADLLRSNLTEANLEQANLQEAHLSYRSAKAIKLERANLREANL 156
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG---------------LRNCNTGGLGLRNCNT 228
N G+ L N L+ N + LR N G L +
Sbjct: 157 SKANLVGINLSGVNLEKANLQEANLADMEISASLPIDHYLVSANLRGANLMGANLEQADL 216
Query: 229 GGLGLRNCN 237
G+ L + N
Sbjct: 217 RGIDLSDAN 225
>gi|377806122|gb|AFB75831.1| hypothetical protein 2200_scaffold1335_00051 [unidentified phage]
Length = 291
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 66/141 (46%), Gaps = 33/141 (23%)
Query: 1 MPPIVA--PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 58
+ ++A + T G ++C T L + LR N G +NC TG NCNT
Sbjct: 71 VAEVIAYGEVRTDGDKSC-TDKLEIVREIPWDEVLRIVNIG----KNC-TGRWNTGNCNT 124
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
G NCNTG NCNTG +CNTG NCNTG NCNTG NCNT
Sbjct: 125 G-----NCNTG-----NCNTG-----DCNTGNCNTGNCNTG-----NCNTG-----NCNT 159
Query: 119 GGLGLRNCNTGGLGLRNCNTG 139
G NCNTG + NTG
Sbjct: 160 GDWNTGNCNTGDWNKSSFNTG 180
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 46/94 (48%), Gaps = 16/94 (17%)
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
+NC TG NCNTG NCNTG NCNTG NCNTG NCNTG
Sbjct: 111 KNC-TGRWNTGNCNTGNCNTGNCNTGDCNTGNCNTG-----NCNTG-----NCNTG---- 155
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSK 247
NCNTG NCNTG + NTG + K
Sbjct: 156 -NCNTGDWNTGNCNTGDWNKSSFNTGCFNTEEQK 188
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 44/86 (51%), Gaps = 16/86 (18%)
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
+NC TG NCNTG NCNTG NCNTG NCNTG NCNTG
Sbjct: 111 KNC-TGRWNTGNCNTGNCNTGNCNTGDCNTGNCNTG-----NCNTG-----NCNTG---- 155
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTG 199
NCNTG NCNTG + NTG
Sbjct: 156 -NCNTGDWNTGNCNTGDWNKSSFNTG 180
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 49/96 (51%), Gaps = 26/96 (27%)
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+NC TG NCNTG NCNTG NCNTG +CNTG NCNTG
Sbjct: 111 KNC-TGRWNTGNCNTG-----NCNTG-----NCNTG-----DCNTGNCNTGNCNTG---- 150
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
NCNTG NCNTG NCNTG + NTG
Sbjct: 151 -NCNTG-----NCNTGDWNTGNCNTGDWNKSSFNTG 180
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 49/96 (51%), Gaps = 26/96 (27%)
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
+NC TG NCNTG NCNTG NCNTG +CNTG NCNTG
Sbjct: 111 KNC-TGRWNTGNCNTG-----NCNTG-----NCNTG-----DCNTGNCNTGNCNTG---- 150
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
NCNTG NCNTG NCNTG + NTG
Sbjct: 151 -NCNTG-----NCNTGDWNTGNCNTGDWNKSSFNTG 180
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 49/96 (51%), Gaps = 26/96 (27%)
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+NC TG NCNTG NCNTG NCNTG +CNTG NCNTG
Sbjct: 111 KNC-TGRWNTGNCNTG-----NCNTG-----NCNTG-----DCNTGNCNTGNCNTG---- 150
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
NCNTG NCNTG NCNTG + NTG
Sbjct: 151 -NCNTG-----NCNTGDWNTGNCNTGDWNKSSFNTG 180
>gi|428226008|ref|YP_007110105.1| pentapeptide repeat-containing protein [Geitlerinema sp. PCC 7407]
gi|427985909|gb|AFY67053.1| pentapeptide repeat protein [Geitlerinema sp. PCC 7407]
Length = 438
Score = 43.5 bits (101), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 72/210 (34%), Gaps = 10/210 (4%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 102
L N LR N G L CN+ L N + G LRN N + + N
Sbjct: 110 LDNAELNDASLREANLQGADL--CNSK---LINVDFRGADLRNTNLSDIDAKGANFEDAD 164
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
LR N G L N + L N N + N + L+ N N + +
Sbjct: 165 LREANLGQALLCGANLDKIILPNANLACVDFSNASLQEADLQGANLTDSSFVNVDFRNVK 224
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
L N N L+ N + LR N L N N G L N N L+ N
Sbjct: 225 LSNANFFRAELKGANFENVDLREVNLENSILINANLRGSNLCNVNLSYADLKGANFENAD 284
Query: 223 LRNCNTGGLGLRNCNTGGL---IVPKSKRG 249
LR + G+R T I P S +G
Sbjct: 285 LRGADLD--GVRYDETTQFPEDIHPSSYQG 312
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 81/243 (33%), Gaps = 18/243 (7%)
Query: 5 VAPISTKGLRNCNT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
+ + G+R+ ++ L L + G+ L++ N L + G N + L
Sbjct: 15 IQELYASGVRDFSSQEDDLNLDGVDFTGVDLQDANLSYLSMIKSKIVG---ANFSRVDLS 71
Query: 63 LRNCNTGGLGLRNCNTGGLG--------LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 114
N L N ++ LG L L N LR N G L
Sbjct: 72 DNNLTEADLSETNLSSANLGYSCLHRAKLDKAVLSDAKLDNAELNDASLREANLQGADL- 130
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
CN+ L N + G LRN N + + N LR N G L N + L
Sbjct: 131 -CNSK---LINVDFRGADLRNTNLSDIDAKGANFEDADLREANLGQALLCGANLDKIILP 186
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
N N + N + L+ N N + + L N N L+ N + LR
Sbjct: 187 NANLACVDFSNASLQEADLQGANLTDSSFVNVDFRNVKLSNANFFRAELKGANFENVDLR 246
Query: 235 NCN 237
N
Sbjct: 247 EVN 249
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 65/189 (34%), Gaps = 5/189 (2%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LR N G L CN+ L N + G LRN N + + N
Sbjct: 110 LDNAELNDASLREANLQGADL--CNSK---LINVDFRGADLRNTNLSDIDAKGANFEDAD 164
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
LR N G L N + L N N + N + L+ N N + +
Sbjct: 165 LREANLGQALLCGANLDKIILPNANLACVDFSNASLQEADLQGANLTDSSFVNVDFRNVK 224
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
L N N L+ N + LR N L N N G L N N L+ N
Sbjct: 225 LSNANFFRAELKGANFENVDLREVNLENSILINANLRGSNLCNVNLSYADLKGANFENAD 284
Query: 213 LRNCNTGGL 221
LR + G+
Sbjct: 285 LRGADLDGV 293
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 67/203 (33%), Gaps = 5/203 (2%)
Query: 6 APISTKGLRNCNTGGLGL-----RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
A ++ LR N G L N + G LRN N + + N LR N G
Sbjct: 113 AELNDASLREANLQGADLCNSKLINVDFRGADLRNTNLSDIDAKGANFEDADLREANLGQ 172
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
L N + L N N + N + L+ N N + + L N N
Sbjct: 173 ALLCGANLDKIILPNANLACVDFSNASLQEADLQGANLTDSSFVNVDFRNVKLSNANFFR 232
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L+ N + LR N L N N G L N N L+ N LR + G
Sbjct: 233 AELKGANFENVDLREVNLENSILINANLRGSNLCNVNLSYADLKGANFENADLRGADLDG 292
Query: 181 LGLRNCNTGGLGLRNCNTGGLGL 203
+ + + GL L
Sbjct: 293 VRYDETTQFPEDIHPSSYQGLWL 315
>gi|449277715|gb|EMC85793.1| Chloride intracellular channel protein 6, partial [Columba livia]
Length = 143
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 2 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 61
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 62 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 121
Query: 136 CNTGGLGLRNCNTGGLG 152
C T +G C T +G
Sbjct: 122 CVTNPIGQCVCVTNPIG 138
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 2 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 61
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 62 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 121
Query: 146 CNTGGLGLRNCNTGGLG 162
C T +G C T +G
Sbjct: 122 CVTNPIGQCVCVTNPIG 138
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 95
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 2 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 61
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 62 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 121
Query: 156 CNTGGLGLRNCNTGGLG 172
C T +G C T +G
Sbjct: 122 CVTNPIGQCVCVTNPIG 138
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 46 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 2 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 61
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 62 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 121
Query: 166 CNTGGLGLRNCNTGGLG 182
C T +G C T +G
Sbjct: 122 CVTNPIGQCVCVTNPIG 138
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 2 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 61
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 62 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 121
Query: 176 CNTGGLGLRNCNTGGLG 192
C T +G C T +G
Sbjct: 122 CVTNPIGQCVCVTNPIG 138
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 2 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 61
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 62 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 121
Query: 186 CNTGGLGLRNCNTGGLG 202
C T +G C T +G
Sbjct: 122 CVTNPIGQCVCVTNPIG 138
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 2 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 61
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 62 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 121
Query: 196 CNTGGLGLRNCNTGGLG 212
C T +G C T +G
Sbjct: 122 CVTNPIGQCVCVTNPIG 138
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 2 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 61
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 62 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 121
Query: 206 CNTGGLGLRNCNTGGLG 222
C T +G C T +G
Sbjct: 122 CVTNPIGQCVCVTNPIG 138
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 56/137 (40%)
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 2 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 61
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 62 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 121
Query: 216 CNTGGLGLRNCNTGGLG 232
C T +G C T +G
Sbjct: 122 CVTNPIGQCVCVTNPIG 138
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 55/136 (40%)
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 2 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 61
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
C T +G C T +G C T +G C T +G C T +G C T +G
Sbjct: 62 CVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCVCVTNPIGQCV 121
Query: 226 CNTGGLGLRNCNTGGL 241
C T +G C T +
Sbjct: 122 CVTNPIGQCVCVTNPI 137
>gi|7508138|pir||T28716 hypothetical protein T21D12.6 - Caenorhabditis elegans
Length = 195
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 71/182 (39%), Gaps = 2/182 (1%)
Query: 8 ISTKGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
+TKGL T GL + T GL T GL + T GL + T GL +
Sbjct: 3 FTTKGLTTMRLTTMGLTTKGLTTKGLTTMGLTTMGLTTKGLTTMGLSTKGLTTMGLTTKG 62
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T GL + T GL + T GL + GL GL + T GL +
Sbjct: 63 LTTMGLTTKGLTTMGLTTKGLTTKGLTTMGLTSMGLTTMGLTPMGLTTKGLTTKGLTTKG 122
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
T GL + T GL + T GL + T GL + +T L + +T L LRN
Sbjct: 123 LTTMGLTTKGLTTMGLTTKGLTTMGLTTKGLTTMGLTKKGLSTKALTTKGLDTKVLFLRN 182
Query: 186 CN 187
Sbjct: 183 FK 184
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 70/184 (38%), Gaps = 4/184 (2%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 95
T GL T GL + T GL T GL + T GL + T GL +
Sbjct: 3 FTTKGLTTMRLTTMGLTTKGLTTKGLTTMGLTTMGLTTKGLTTMGLSTKGLTTMGLTTKG 62
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL--RNCNTGGLGL 153
T GL + T GL + T GL +GL +GL + T GL
Sbjct: 63 LTTMGLTTKGLTTMGLTTKGLTTKGL--TTMGLTSMGLTTMGLTPMGLTTKGLTTKGLTT 120
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
+ T GL + T GL + T GL + T GL + +T L + +T L L
Sbjct: 121 KGLTTMGLTTKGLTTMGLTTKGLTTMGLTTKGLTTMGLTKKGLSTKALTTKGLDTKVLFL 180
Query: 214 RNCN 217
RN
Sbjct: 181 RNFK 184
>gi|281208859|gb|EFA83034.1| BTB/POZ domain-containing protein [Polysphondylium pallidum PN500]
Length = 1312
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 54/158 (34%), Gaps = 5/158 (3%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
GL L + L LRN N R N L N L N G LR N
Sbjct: 1140 GLNLSGVDLSKLDLRNINFKMTNFRETNLSKCNLDNALLQEADLSYANLCGASLRGANLS 1199
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G L +C G + L +CN L N G LR N G L NCN
Sbjct: 1200 GANLEHCILKGTNFEDRGGQRATLESCNFKNAILEEANFSGANLRVANFKGANLENCN-- 1257
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
R + G L + N G L N G+ LR N
Sbjct: 1258 ---FRGADLAGANLEDTNLRGANLHKANLIGVNLRGAN 1292
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 54/158 (34%), Gaps = 5/158 (3%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
GL L + L LRN N R N L N L N G LR N
Sbjct: 1140 GLNLSGVDLSKLDLRNINFKMTNFRETNLSKCNLDNALLQEADLSYANLCGASLRGANLS 1199
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G L +C G + L +CN L N G LR N G L NCN
Sbjct: 1200 GANLEHCILKGTNFEDRGGQRATLESCNFKNAILEEANFSGANLRVANFKGANLENCN-- 1257
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
R + G L + N G L N G+ LR N
Sbjct: 1258 ---FRGADLAGANLEDTNLRGANLHKANLIGVNLRGAN 1292
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 54/158 (34%), Gaps = 5/158 (3%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 99
GL L + L LRN N R N L N L N G LR N
Sbjct: 1140 GLNLSGVDLSKLDLRNINFKMTNFRETNLSKCNLDNALLQEADLSYANLCGASLRGANLS 1199
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
G L +C G + L +CN L N G LR N G L NCN
Sbjct: 1200 GANLEHCILKGTNFEDRGGQRATLESCNFKNAILEEANFSGANLRVANFKGANLENCN-- 1257
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
R + G L + N G L N G+ LR N
Sbjct: 1258 ---FRGADLAGANLEDTNLRGANLHKANLIGVNLRGAN 1292
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 54/158 (34%), Gaps = 5/158 (3%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
GL L + L LRN N R N L N L N G LR N
Sbjct: 1140 GLNLSGVDLSKLDLRNINFKMTNFRETNLSKCNLDNALLQEADLSYANLCGASLRGANLS 1199
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
G L +C G + L +CN L N G LR N G L NCN
Sbjct: 1200 GANLEHCILKGTNFEDRGGQRATLESCNFKNAILEEANFSGANLRVANFKGANLENCN-- 1257
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
R + G L + N G L N G+ LR N
Sbjct: 1258 ---FRGADLAGANLEDTNLRGANLHKANLIGVNLRGAN 1292
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 54/158 (34%), Gaps = 5/158 (3%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
GL L + L LRN N R N L N L N G LR N
Sbjct: 1140 GLNLSGVDLSKLDLRNINFKMTNFRETNLSKCNLDNALLQEADLSYANLCGASLRGANLS 1199
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G L +C G + L +CN L N G LR N G L NCN
Sbjct: 1200 GANLEHCILKGTNFEDRGGQRATLESCNFKNAILEEANFSGANLRVANFKGANLENCN-- 1257
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
R + G L + N G L N G+ LR N
Sbjct: 1258 ---FRGADLAGANLEDTNLRGANLHKANLIGVNLRGAN 1292
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 54/158 (34%), Gaps = 5/158 (3%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL L + L LRN N R N L N L N G LR N
Sbjct: 1140 GLNLSGVDLSKLDLRNINFKMTNFRETNLSKCNLDNALLQEADLSYANLCGASLRGANLS 1199
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
G L +C G + L +CN L N G LR N G L NCN
Sbjct: 1200 GANLEHCILKGTNFEDRGGQRATLESCNFKNAILEEANFSGANLRVANFKGANLENCN-- 1257
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
R + G L + N G L N G+ LR N
Sbjct: 1258 ---FRGADLAGANLEDTNLRGANLHKANLIGVNLRGAN 1292
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 54/158 (34%), Gaps = 5/158 (3%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
GL L + L LRN N R N L N L N G LR N
Sbjct: 1140 GLNLSGVDLSKLDLRNINFKMTNFRETNLSKCNLDNALLQEADLSYANLCGASLRGANLS 1199
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
G L +C G + L +CN L N G LR N G L NCN
Sbjct: 1200 GANLEHCILKGTNFEDRGGQRATLESCNFKNAILEEANFSGANLRVANFKGANLENCN-- 1257
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
R + G L + N G L N G+ LR N
Sbjct: 1258 ---FRGADLAGANLEDTNLRGANLHKANLIGVNLRGAN 1292
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 50/152 (32%), Gaps = 15/152 (9%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
+ L LRN N R N L N L N G LR N G L +
Sbjct: 1146 VDLSKLDLRNINFKMTNFRETNLSKCNLDNALLQEADLSYANLCGASLRGANLSGANLEH 1205
Query: 76 CNTGG----------LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
C G L +CN L N G LR N G L NCN R
Sbjct: 1206 CILKGTNFEDRGGQRATLESCNFKNAILEEANFSGANLRVANFKGANLENCN-----FRG 1260
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
+ G L + N G L N G+ LR N
Sbjct: 1261 ADLAGANLEDTNLRGANLHKANLIGVNLRGAN 1292
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 41/121 (33%)
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
GL L + L LRN N R N L N L N G LR N
Sbjct: 1140 GLNLSGVDLSKLDLRNINFKMTNFRETNLSKCNLDNALLQEADLSYANLCGASLRGANLS 1199
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G L +C G + L +CN L N G LR N G L NCN
Sbjct: 1200 GANLEHCILKGTNFEDRGGQRATLESCNFKNAILEEANFSGANLRVANFKGANLENCNFR 1259
Query: 240 G 240
G
Sbjct: 1260 G 1260
>gi|158336440|ref|YP_001517614.1| pentapeptide repeat-containing protein [Acaryochloris marina
MBIC11017]
gi|158306681|gb|ABW28298.1| pentapeptide repeat protein [Acaryochloris marina MBIC11017]
Length = 339
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 69/209 (33%), Gaps = 15/209 (7%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
TK L N + LR+ L N L N LR+ N L N
Sbjct: 122 ETKDLCNVDLRAANLRDAILNSADLSGVNLSWSDLCEANLSDAILRDANLILAMLERANL 181
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
G L N N LR+ N L + + G L N LR + G L N N
Sbjct: 182 NGANLSNAN-----LRSANLSYTNLSSADLFGADLFVANLSSANLRGADFNGANLSNANL 236
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 188
L N N L N N G L + N LR N + L N N G L N N
Sbjct: 237 DSADLSNAN-----LSNANLIGADLSHVNLSNASLRGSNFSNVNLSNANLDGADLSNAN- 290
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
R N G L N N L + N
Sbjct: 291 ----FRGTNLSGANLSNANLIDADLLDAN 315
Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 57/165 (34%), Gaps = 15/165 (9%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
LR+ N L N G L N N LR+ N L + + G L N
Sbjct: 166 LRDANLILAMLERANLNGANLSNAN-----LRSANLSYTNLSSADLFGADLFVANLSSAN 220
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
LR + G L N N L N N L N N G L + N LR N +
Sbjct: 221 LRGADFNGANLSNANLDSADLSNAN-----LSNANLIGADLSHVNLSNASLRGSNFSNVN 275
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
L N N G L N N R N G L N N L + N
Sbjct: 276 LSNANLDGADLSNAN-----FRGTNLSGANLSNANLIDADLLDAN 315
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 50/142 (35%), Gaps = 10/142 (7%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A +S LR+ N L + + G L N LR + G L N N L N
Sbjct: 184 ANLSNANLRSANLSYTNLSSADLFGADLFVANLSSANLRGADFNGANLSNANLDSADLSN 243
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
N L N N G L + N LR N + L N N G L N N R
Sbjct: 244 AN-----LSNANLIGADLSHVNLSNASLRGSNFSNVNLSNANLDGADLSNAN-----FRG 293
Query: 126 CNTGGLGLRNCNTGGLGLRNCN 147
N G L N N L + N
Sbjct: 294 TNLSGANLSNANLIDADLLDAN 315
>gi|17230797|ref|NP_487345.1| hypothetical protein all3305 [Nostoc sp. PCC 7120]
gi|17132400|dbj|BAB75004.1| all3305 [Nostoc sp. PCC 7120]
Length = 496
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 74/222 (33%), Gaps = 5/222 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
L LRN N + L N LR C+ G LR C+ G L G L N
Sbjct: 228 LDLRNINLRRVELLGANLQRADLRGCDFRGADLRGCDFSGANLEGAELAGSILFEANFLK 287
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT-- 138
L+ N G L GG LR+ N G LR N G L N L+ N
Sbjct: 288 ANLQGANIQGANLNRAELGGANLRSANLMGASLRAANLPGANLYKVNLQHAILKLANLCG 347
Query: 139 GGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
L L N LG N C G L+ N G L N L+ +
Sbjct: 348 AKLFLANLQGAKLGKANLSLCGLIGANLQGANLNGANLAEANLNAAKLQQAEMLFVDFTE 407
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+ L N G L+ + L CN G L + N
Sbjct: 408 ASLTEADLCKANLMGANLQRASLYQANLFQCNLVGANLSDTN 449
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 66/201 (32%), Gaps = 5/201 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
LR C+ G LR C+ G L G L N L+ N G L GG
Sbjct: 249 DLRGCDFRGADLRGCDFSGANLEGAELAGSILFEANFLKANLQGANIQGANLNRAELGGA 308
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT--GGLGLRNCNTGGLGLRN---C 126
LR+ N G LR N G L N L+ N L L N LG N C
Sbjct: 309 NLRSANLMGASLRAANLPGANLYKVNLQHAILKLANLCGAKLFLANLQGAKLGKANLSLC 368
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G L+ N G L N L+ + + L N G L+
Sbjct: 369 GLIGANLQGANLNGANLAEANLNAAKLQQAEMLFVDFTEASLTEADLCKANLMGANLQRA 428
Query: 187 NTGGLGLRNCNTGGLGLRNCN 207
+ L CN G L + N
Sbjct: 429 SLYQANLFQCNLVGANLSDTN 449
>gi|146092981|ref|XP_001466602.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070965|emb|CAM69641.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 698
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 23/55 (41%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
GG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 73 AGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFG 127
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 23/55 (41%)
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
GG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 73 AGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFG 127
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 23/55 (41%)
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
GG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 73 AGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFG 127
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 22/54 (40%)
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
GG G TGG G TGG G TGG G TGG G TGG
Sbjct: 73 AGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGF 126
>gi|306797745|ref|ZP_07436047.1| hypothetical protein TMFG_04055, partial [Mycobacterium
tuberculosis SUMu006]
gi|308341933|gb|EFP30784.1| hypothetical protein TMFG_04055 [Mycobacterium tuberculosis
SUMu006]
Length = 411
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
Query: 21 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
+GL N G +G N G G GL N G G N TG +GL N TG +G+ N T
Sbjct: 1 MGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGT 60
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
G G+ N T N G G N G+ N G G N NTG L + NT
Sbjct: 61 GNFGIGNSGTS----YNTGIGNTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNT 114
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
G + NTG N NTG N NTGG
Sbjct: 115 GDFNTGSSNTGFFNPGNLNTGVGNTGNVNTGGF 147
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRN 75
G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 22 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 81
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
NTG NTG N NTG L + NTG + NTG N NTG N
Sbjct: 82 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGN 141
Query: 136 CNTGGL 141
NTGG
Sbjct: 142 VNTGGF 147
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRNCN 67
GL N G G N TG +GL N TG +G+ N TG G+ N T G+G N
Sbjct: 24 GLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQAN 83
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG NTG N NTG L + NTG + NTG N NTG N N
Sbjct: 84 TGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVN 143
Query: 128 TGGL 131
TGG
Sbjct: 144 TGGF 147
>gi|307086111|ref|ZP_07495224.1| hypothetical protein TMLG_03989, partial [Mycobacterium
tuberculosis SUMu012]
gi|308364418|gb|EFP53269.1| hypothetical protein TMLG_03989 [Mycobacterium tuberculosis
SUMu012]
Length = 641
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 186
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTG + + NTG NTGG + NTG L + NTG + NTG I
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 121
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 76
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 86
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 96
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 106
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 116
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 126
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 136
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 146
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 156
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 166
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 10 FNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGV 69
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
+ + NTG NTGG + NTG L + NTG + NTG
Sbjct: 70 VNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 539 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 598
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
TG +G N TG G+ N + G+ N GL N
Sbjct: 599 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 638
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 539 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 598
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
TG +G N TG G+ N + G+ N GL N
Sbjct: 599 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 638
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 96
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 539 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 598
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
TG +G N TG G+ N + G+ N GL N
Sbjct: 599 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 638
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 539 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 598
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
TG +G N TG G+ N + G+ N GL N
Sbjct: 599 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 638
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 539 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 598
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
TG +G N TG G+ N + G+ N GL N
Sbjct: 599 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 638
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 539 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 598
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
TG +G N TG G+ N + G+ N GL N
Sbjct: 599 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 638
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 539 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 598
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
TG +G N TG G+ N + G+ N GL N
Sbjct: 599 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 638
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 539 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 598
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
TG +G N TG G+ N + G+ N GL N
Sbjct: 599 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 638
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 539 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 598
Query: 197 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
TG +G N TG G+ N + G+ N GL N
Sbjct: 599 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 638
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 68
GL N TG +G N TG G+ N + G+ N GL N NTG + + NT
Sbjct: 18 GLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNT 77
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
G NTGG + NTG L + NTG + NTG
Sbjct: 78 GSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 120
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 542 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 601
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 106
+G N TG G+ N + G+ N GL N
Sbjct: 602 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 638
>gi|156366813|ref|XP_001627116.1| predicted protein [Nematostella vectensis]
gi|156214016|gb|EDO35016.1| predicted protein [Nematostella vectensis]
Length = 102
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
G G++N G G++N G G++ G G+ G++N G G++N
Sbjct: 1 GRGVQNMGVPGRGVQNMGVPGTGVQKMGVPGKGMP-------GVQNMGMPGTGVQNMGVP 53
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
G G++N G G++N G+G++N G G++N G G+ +
Sbjct: 54 GTGVQNMGVPGTGVQNMGVPGMGVQNMRVPGTGVQNMGVPGTGVPD 99
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
G G++N G G++N G G++ G G+ G++N G G++N
Sbjct: 1 GRGVQNMGVPGRGVQNMGVPGTGVQKMGVPGKGMP-------GVQNMGMPGTGVQNMGVP 53
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
G G++N G G++N G+G++N G G++N G G+ +
Sbjct: 54 GTGVQNMGVPGTGVQNMGVPGMGVQNMRVPGTGVQNMGVPGTGVPD 99
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 99
G G++N G G++N G G++ G G+ G++N G G++N
Sbjct: 1 GRGVQNMGVPGRGVQNMGVPGTGVQKMGVPGKGMP-------GVQNMGMPGTGVQNMGVP 53
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
G G++N G G++N G+G++N G G++N G G+ +
Sbjct: 54 GTGVQNMGVPGTGVQNMGVPGMGVQNMRVPGTGVQNMGVPGTGVPD 99
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G G++N G G++N G G++ G G+ G++N G G++N
Sbjct: 1 GRGVQNMGVPGRGVQNMGVPGTGVQKMGVPGKGMP-------GVQNMGMPGTGVQNMGVP 53
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
G G++N G G++N G+G++N G G++N G G+ +
Sbjct: 54 GTGVQNMGVPGTGVQNMGVPGMGVQNMRVPGTGVQNMGVPGTGVPD 99
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
G G++N G G++N G G++ G G+ G++N G G++N
Sbjct: 1 GRGVQNMGVPGRGVQNMGVPGTGVQKMGVPGKGMP-------GVQNMGMPGTGVQNMGVP 53
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
G G++N G G++N G+G++N G G++N G G+ +
Sbjct: 54 GTGVQNMGVPGTGVQNMGVPGMGVQNMRVPGTGVQNMGVPGTGVPD 99
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G G++N G G++N G G++ G G+ G++N G G++N
Sbjct: 1 GRGVQNMGVPGRGVQNMGVPGTGVQKMGVPGKGMP-------GVQNMGMPGTGVQNMGVP 53
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
G G++N G G++N G+G++N G G++N G G+ +
Sbjct: 54 GTGVQNMGVPGTGVQNMGVPGMGVQNMRVPGTGVQNMGVPGTGVPD 99
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G G++N G G++N G G++ G G+ G++N G G++N
Sbjct: 1 GRGVQNMGVPGRGVQNMGVPGTGVQKMGVPGKGMP-------GVQNMGMPGTGVQNMGVP 53
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
G G++N G G++N G+G++N G G++N G G+ +
Sbjct: 54 GTGVQNMGVPGTGVQNMGVPGMGVQNMRVPGTGVQNMGVPGTGVPD 99
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G G++N G G++N G G++ G G+ G++N G G++N
Sbjct: 1 GRGVQNMGVPGRGVQNMGVPGTGVQKMGVPGKGMP-------GVQNMGMPGTGVQNMGVP 53
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
G G++N G G++N G+G++N G G++N G G+ +
Sbjct: 54 GTGVQNMGVPGTGVQNMGVPGMGVQNMRVPGTGVQNMGVPGTGVPD 99
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCN 67
+G++N G G++N G G++ G G+ +N G G++N G G++N
Sbjct: 2 RGVQNMGVPGRGVQNMGVPGTGVQKMGVPGKGMPGVQNMGMPGTGVQNMGVPGTGVQNMG 61
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
G G++N G+G++N G G++N G G+ +
Sbjct: 62 VPGTGVQNMGVPGMGVQNMRVPGTGVQNMGVPGTGVPD 99
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
G G++N G G++N G G++ G G+ G++N G G++N
Sbjct: 1 GRGVQNMGVPGRGVQNMGVPGTGVQKMGVPGKGMP-------GVQNMGMPGTGVQNMGVP 53
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
G G++N G G++N G+G++N G G++N G VP
Sbjct: 54 GTGVQNMGVPGTGVQNMGVPGMGVQNMRVPGTGVQNMGVPGTGVPDE 100
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 64
+ +G++N G G++ G G+ +N G G++N G G++N G G++
Sbjct: 9 VPGRGVQNMGVPGTGVQKMGVPGKGMPGVQNMGMPGTGVQNMGVPGTGVQNMGVPGTGVQ 68
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 95
N G+G++N G G++N G G+ +
Sbjct: 69 NMGVPGMGVQNMRVPGTGVQNMGVPGTGVPD 99
>gi|86608622|ref|YP_477384.1| pentapeptide repeat-containing protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557164|gb|ABD02121.1| pentapeptide repeat family protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 344
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 77/245 (31%), Gaps = 11/245 (4%)
Query: 4 IVAPISTKGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
IVA +G RN + G+ L+ GG+ L N LR CN G LR +
Sbjct: 97 IVA--YRRGERNFAYADLEGVDLQEARLGGVNLYEANLRKANLRLCNFNGAHLRRADLRQ 154
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-TGGLGLRNCNTGGLGLRNCNTG 119
L+ G L + G LR G LR + L L+N
Sbjct: 155 ANLQEAKLSGAVLEGADLRGSDLRGAKVSGTSLRGSRLSEETHLEERVRHIWQLQNWGGQ 214
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G + LR + LR + LR N G L N LR N
Sbjct: 215 GQDFSGQDLSKADLRELVLCQIRLRGADLNRADLRGSNLEGADLGGANLQRADLRGANLQ 274
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
L N G LR G LR + G L N G GL
Sbjct: 275 NADLEGANLSGAELRQAQFQGANLRRADVSGANLTQANLEG-----AQIEGLKHSGSRIA 329
Query: 240 GLIVP 244
GLI P
Sbjct: 330 GLIFP 334
>gi|433629968|ref|YP_007263596.1| Conserved protein of unknown function, PPE family, PPE13 (part1)
[Mycobacterium canettii CIPT 140070010]
gi|432161561|emb|CCK58906.1| Conserved protein of unknown function, PPE family, PPE13 (part1)
[Mycobacterium canettii CIPT 140070010]
Length = 509
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 89/246 (36%), Gaps = 7/246 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G +G N +G G N G +G N G +G N +G G N G G N
Sbjct: 243 GDIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGN 302
Query: 79 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
G G N +G G N G G RN G G + +G LG N +G G N
Sbjct: 303 GNAGFLNIGSGNEGSGNLGFGNDGDRNLGFGNFGNTDVGSGNLGDFNLGSGNNGFSNVGF 362
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
G LG N G G N G GL N G+G N TG G N +G N +
Sbjct: 363 GNLGDNNLGFGNSGNNNI---GFGLTGNNMIGIGALNSGTGNFGFGNSGNNNIGFFNSGS 419
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLIVPKSKRGAQENASR 256
+G N G N G N T L R T P SK ++A R
Sbjct: 420 NNVGFFNSGDNNFGFSNAGDTNTGFWNRPTATPALETRVTPTPDSATPASKT--PDSAMR 477
Query: 257 SENEPC 262
+ P
Sbjct: 478 ASKTPA 483
>gi|57116882|ref|YP_177817.1| PPE family protein PPE21 [Mycobacterium tuberculosis H37Rv]
gi|148661344|ref|YP_001282867.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|397673401|ref|YP_006514936.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|6136475|sp|Q10778.2|PPE21_MYCTU RecName: Full=Uncharacterized PPE family protein PPE21
gi|148505496|gb|ABQ73305.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|395138306|gb|AFN49465.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444895056|emb|CCP44312.1| PPE family protein PPE21 [Mycobacterium tuberculosis H37Rv]
Length = 678
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 183 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 237
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L N ++G G N +G +G N G LG N +G G
Sbjct: 238 GSGNIGSYNLGGGNTGDL---NPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGD 294
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 295 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 354
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 355 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 414
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 321 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 380
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 381 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 439
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 440 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 499
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 500 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 548
>gi|218247487|ref|YP_002372858.1| pentapeptide repeat-containing protein [Cyanothece sp. PCC 8801]
gi|257061177|ref|YP_003139065.1| pentapeptide repeat-containing protein [Cyanothece sp. PCC 8802]
gi|218167965|gb|ACK66702.1| pentapeptide repeat protein [Cyanothece sp. PCC 8801]
gi|256591343|gb|ACV02230.1| pentapeptide repeat protein [Cyanothece sp. PCC 8802]
Length = 401
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 61/171 (35%), Gaps = 10/171 (5%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
L N N G+ L N L+N N L+N N L++ L G+
Sbjct: 40 DLENANLKGMNLEGANLEKANLKNANLERANLKNANLKQAILQDAKLTEAQLEGVMLDGV 99
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N G+ L N G+ N G+ L N N G +R G L N G+
Sbjct: 100 NFINAKLKGVNLSGVNLKGVNFVNAEMDGIILTNANLEGAQMRGVTLEGANLDGANLQGV 159
Query: 132 GL-----RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
L N G L+N + G LR G+ L+N N G L +
Sbjct: 160 DLTVHDEERANLTGASLKNADLSGGFLR-----GIRLKNANLEGANLSKTD 205
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 61/171 (35%), Gaps = 10/171 (5%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
L N N G+ L N L+N N L+N N L++ L G+
Sbjct: 40 DLENANLKGMNLEGANLEKANLKNANLERANLKNANLKQAILQDAKLTEAQLEGVMLDGV 99
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
N G+ L N G+ N G+ L N N G +R G L N G+
Sbjct: 100 NFINAKLKGVNLSGVNLKGVNFVNAEMDGIILTNANLEGAQMRGVTLEGANLDGANLQGV 159
Query: 142 GL-----RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
L N G L+N + G LR G+ L+N N G L +
Sbjct: 160 DLTVHDEERANLTGASLKNADLSGGFLR-----GIRLKNANLEGANLSKTD 205
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 61/171 (35%), Gaps = 10/171 (5%)
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
L N N G+ L N L+N N L+N N L++ L G+
Sbjct: 40 DLENANLKGMNLEGANLEKANLKNANLERANLKNANLKQAILQDAKLTEAQLEGVMLDGV 99
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
N G+ L N G+ N G+ L N N G +R G L N G+
Sbjct: 100 NFINAKLKGVNLSGVNLKGVNFVNAEMDGIILTNANLEGAQMRGVTLEGANLDGANLQGV 159
Query: 192 GL-----RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
L N G L+N + G LR G+ L+N N G L +
Sbjct: 160 DLTVHDEERANLTGASLKNADLSGGFLR-----GIRLKNANLEGANLSKTD 205
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
L N N G+ L N L+N N L+N N L++ L G+
Sbjct: 40 DLENANLKGMNLEGANLEKANLKNANLERANLKNANLKQAILQDAKLTEAQLEGVMLDGV 99
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG- 240
N G+ L N G+ N G+ L N N G +R G L N G
Sbjct: 100 NFINAKLKGVNLSGVNLKGVNFVNAEMDGIILTNANLEGAQMRGVTLEGANLDGANLQGV 159
Query: 241 -LIVPKSKRG 249
L V +R
Sbjct: 160 DLTVHDEERA 169
>gi|54022634|ref|YP_116876.1| histidine kinase [Nocardia farcinica IFM 10152]
gi|54014142|dbj|BAD55512.1| putative histidine kinase [Nocardia farcinica IFM 10152]
Length = 1268
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 71/211 (33%), Gaps = 14/211 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG-- 69
GL GG G GGL R GG G GGL R G + G
Sbjct: 811 GLPQRQPGGNGAPAPTAGGLPQRQP--GGNGAPAPTAGGLPHREPGANGAPEPDVARGSA 868
Query: 70 --GLGLRN---CNTGGLGLRNCNTGG-LGLRNCNTGGLGL-RNCNTGGLGLRNCNTGGLG 122
GL R GG GL G GL G GL R GL R GL
Sbjct: 869 ATGLPQRESGPARPGGNGLPQRQPGATPGLPQREPGATGLHREGGAAGLPPREGGPSGLP 928
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
R GL R GG+ R+ GL R GL R GGL R G G
Sbjct: 929 QREAGPNGLPQRGAPAGGIPPRDGGPSGLPQREAGPNGLPQRGAAPGGLPQRE---GAAG 985
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
L + G GL G GL + G GL
Sbjct: 986 LAPRDGGAPGLPQREGGATGLPPRDNGATGL 1016
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 59/173 (34%), Gaps = 14/173 (8%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 77
GL R GL R GL R GG+ R+ GL R GL R
Sbjct: 914 AAGLPPREGGPSGLPQREAGPNGLPQRGAPAGGIPPRDGGPSGLPQREAGPNGLPQRGAA 973
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-- 135
GGL R G GL + G GL G GL + G GL G
Sbjct: 974 PGGLPQRE---GAAGLAPRDGGAPGLPQREGGATGLPPRDNGATGLPPRAPGAPAAGEGG 1030
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 188
N+ GL R N GL R GGL R+ GL R GL R
Sbjct: 1031 PNSTGLPQRGAN--GLPQR----GGLPQRDS---GLPERESGANGLPQRAPEP 1074
>gi|308378968|ref|ZP_07484506.2| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308358702|gb|EFP47553.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
Length = 679
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 184 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 238
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L N ++G G N +G +G N G LG N +G G
Sbjct: 239 GSGNIGSYNLGGGNTGDL---NPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGD 295
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 296 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 355
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 356 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 415
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 322 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 381
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 382 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 440
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 441 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 500
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 501 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 549
>gi|306775737|ref|ZP_07414074.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|307084126|ref|ZP_07493239.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|308380110|ref|ZP_07488731.2| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308215829|gb|EFO75228.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308362583|gb|EFP51434.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308366248|gb|EFP55099.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
Length = 681
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 186 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 240
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L N ++G G N +G +G N G LG N +G G
Sbjct: 241 GSGNIGSYNLGGGNTGDL---NPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGD 297
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 298 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 357
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 358 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 417
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 324 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 383
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 384 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 442
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 443 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 502
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 503 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 551
>gi|308380653|ref|ZP_07490674.2| hypothetical protein TMKG_02602 [Mycobacterium tuberculosis
SUMu011]
gi|308360826|gb|EFP49677.1| hypothetical protein TMKG_02602 [Mycobacterium tuberculosis
SUMu011]
Length = 473
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 70/170 (41%), Gaps = 10/170 (5%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 146
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
NTG + + NTG NTGG + NTG L + NTG + NTG N
Sbjct: 68 NTGVVNAGSYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNY 127
Query: 207 NTGGLGLRNCNTGGLGLRNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+ G R G LG +T + N + G +IVP + A
Sbjct: 128 SNGAF-WRGDYQGLLGFSYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 176
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 156
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
NTG + + NTG NTGG + NTG L + NTG + NTG N
Sbjct: 68 NTGVVNAGSYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNY 127
Query: 217 NTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
+ G R G LG +T I+P+ A +AS + I+F
Sbjct: 128 SNGAF-WRGDYQGLLGFSYTST---IIPEFTV-ANIHASGGAGPIIVPSIQF 174
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 96/242 (39%), Gaps = 17/242 (7%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 76
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
NTG + + NTG NTGG + NTG L + NTG + NTG N
Sbjct: 68 NTGVVNAGSYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNY 127
Query: 137 NTGGLGLRNCNTGGLGLRNCNT--GGLGLRNCNTGG----LGLRNCNTGGLGLRNCNTGG 190
+ G R G LG +T + N + G + + + + L TG
Sbjct: 128 SNGAF-WRGDYQGLLGFSYTSTIIPEFTVANIHASGGAGPIIVPSIQFPAIPLDLSATGH 186
Query: 191 LG---LRNCNTGGLGLR---NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
+G + + + +R + G + +++ LGL +G ++G +I P
Sbjct: 187 IGGFTIPPVSISPITVRIDPVFDLGPITVQDITIPALGLDPATGVTVG-PIFSSGSIIDP 245
Query: 245 KS 246
S
Sbjct: 246 FS 247
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 96/256 (37%), Gaps = 23/256 (8%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 68
GL N TG +G N TG G+ N + G+ N GL N NTG + + NT
Sbjct: 20 GLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNT 79
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
G NTGG + NTG L + NTG + NTG N + G R
Sbjct: 80 GSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQ 138
Query: 129 GGLGLRNCNT--GGLGLRNCNTGG----LGLRNCNTGGLGLRNCNTGGLG---LRNCNTG 179
G LG +T + N + G + + + + L TG +G + +
Sbjct: 139 GLLGFSYTSTIIPEFTVANIHASGGAGPIIVPSIQFPAIPLDLSATGHIGGFTIPPVSIS 198
Query: 180 GLGLR---NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+ +R + G + +++ LGL G+ + + G + + LG N
Sbjct: 199 PITVRIDPVFDLGPITVQDITIPALGLDPAT--GVTVGPIFSSGSIIDPFSLTLLGFINV 256
Query: 237 NTGGLIVPKSKRGAQE 252
N VP + E
Sbjct: 257 N-----VPAIQTAPSE 267
>gi|167968103|ref|ZP_02550380.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 614
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 119 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 173
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L N ++G G N +G +G N G LG N +G G
Sbjct: 174 GSGNIGSYNLGGGNTGDL---NPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGD 230
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 231 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 290
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 291 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 350
>gi|126658581|ref|ZP_01729728.1| hypothetical protein CY0110_25706 [Cyanothece sp. CCY0110]
gi|126620168|gb|EAZ90890.1| hypothetical protein CY0110_25706 [Cyanothece sp. CCY0110]
Length = 338
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 76/233 (32%), Gaps = 6/233 (2%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+S L N G L N L + L + + GG L + + + L N N
Sbjct: 55 LSRTALDWANLSGTDLTKANLNRAELTHARLISSTLLSADLGGANLSHADLSWVNLENAN 114
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
L N + L N + L + N G L + L N G+ L
Sbjct: 115 LVSADLTGANLKQVNLSNADLRSANLSSANLSGAILNGAKFSRVDLSEANLSGVDL---- 170
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G L + G LR + L + L N + L+ N L+ N
Sbjct: 171 -SGANLSRADLSGADLREADLTNANLYKADINDSKLHNIDLQEAFLQGANFSRANLKGAN 229
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGGLGLRNCNTG 239
G LR N + L + + L + L+N N G LR+ N G
Sbjct: 230 LSGAILREVNLNLVALSEFHVQSVTLASEIDLSSANLKNANLKGAILRHANLG 282
>gi|37522461|ref|NP_925838.1| hypothetical protein gll2892 [Gloeobacter violaceus PCC 7421]
gi|35213462|dbj|BAC90833.1| gll2892 [Gloeobacter violaceus PCC 7421]
Length = 457
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 78/222 (35%), Gaps = 15/222 (6%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N GG+ L N GG L + GG + GG L N GG L + G N
Sbjct: 39 ANLGGVDLGGANLGGADLDGADLGG-----ADLGGADLEGANLGGANLSEADLRG---AN 90
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
N L N N L + N L + N L R N GG L N L
Sbjct: 91 LNWANLNWANLNWADLSGADLNGANLNWAHLNWADL--REANLGGAELNRANLREANLGG 148
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
N G+ L G LR + GG L + GG N GG L+ + GG L
Sbjct: 149 ANLSGVSLSRAFMSGADLRGADLGGANLSEADLGG-----ANLGGANLKGADLGGANLER 203
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSK 247
+ G LR + L C+ G L C G +K
Sbjct: 204 TSLRGADLRGADLRRTRLTGCSLEGAVLEGCQVYGTAAWDAK 245
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 84/240 (35%), Gaps = 25/240 (10%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I +S L N GG+ L N GG L + GG + GG L N GG L
Sbjct: 27 IRPDLSAADLGGANLGGVDLGGANLGGADLDGADLGG-----ADLGGADLEGANLGGANL 81
Query: 64 RNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLGLRNCNT 118
+ G L N N L + + L N N L LR N GG L N
Sbjct: 82 SEADLRGANLNWANLNWANLNWADLSGADLNGANLNWAHLNWADLREANLGGAELNRAN- 140
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
LR N GG N G+ L G LR + GG L + GG N
Sbjct: 141 ----LREANLGG-----ANLSGVSLSRAFMSGADLRGADLGGANLSEADLGG-----ANL 186
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
GG L+ + GG L + G LR + L C+ G L C G +
Sbjct: 187 GGANLKGADLGGANLERTSLRGADLRGADLRRTRLTGCSLEGAVLEGCQVYGTAAWDAKI 246
>gi|392386236|ref|YP_005307865.1| PPE21 [Mycobacterium tuberculosis UT205]
gi|378544787|emb|CCE37062.1| PPE21 [Mycobacterium tuberculosis UT205]
Length = 678
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 99/237 (41%), Gaps = 9/237 (3%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 183 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 237
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L + N G L N G L + NTG
Sbjct: 238 GSGNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGDTNF 297
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGL 181
+ NTG L + NTG NTG + N NTG G N +G +G N + +
Sbjct: 298 GDGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNI 357
Query: 182 GLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 358 GFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 414
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 321 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 380
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 381 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 439
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 440 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 499
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 500 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 548
>gi|113476913|ref|YP_722974.1| serine/threonine protein kinase [Trichodesmium erythraeum IMS101]
gi|110167961|gb|ABG52501.1| serine/threonine protein kinase [Trichodesmium erythraeum IMS101]
Length = 567
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 71/222 (31%), Gaps = 15/222 (6%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
R N L L + LRN + LR G L+N N L+
Sbjct: 355 FRRANFAALKLEDA-----YLRNADLFQANLRGVELRGARLQNANLKKAQLQGSILIKAK 409
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
L+ N L N L + N + L N LR N G LR
Sbjct: 410 LQKANLYRASLEGANLTKAVLVSANLRRVNLSGANLNSTNLRAANFSGAYLREAK----- 464
Query: 143 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 202
L N G L+ N G + + + G LR L+ + G L
Sbjct: 465 LSRANLEGANLKKANLSGANMSHASLRGADLRRATLKDANLKRVDLVGANLAGVTFLDAD 524
Query: 203 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
L+ N G L+N N G L N N G N G I+P
Sbjct: 525 LQGANLKGANLKNANLLGANLENVNLQG-----ANLQGAIMP 561
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 67/207 (32%), Gaps = 10/207 (4%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
R N L L + LRN + LR G L+N N L+
Sbjct: 355 FRRANFAALKLEDA-----YLRNADLFQANLRGVELRGARLQNANLKKAQLQGSILIKAK 409
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-----N 127
L+ N L N L + N + L N LR N G LR N
Sbjct: 410 LQKANLYRASLEGANLTKAVLVSANLRRVNLSGANLNSTNLRAANFSGAYLREAKLSRAN 469
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G L+ N G + + + G LR L+ + G L L+ N
Sbjct: 470 LEGANLKKANLSGANMSHASLRGADLRRATLKDANLKRVDLVGANLAGVTFLDADLQGAN 529
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLR 214
G L+N N G L N N G L+
Sbjct: 530 LKGANLKNANLLGANLENVNLQGANLQ 556
>gi|306795114|ref|ZP_07433416.1| hypothetical protein TMEG_04012, partial [Mycobacterium
tuberculosis SUMu005]
gi|308336635|gb|EFP25486.1| hypothetical protein TMEG_04012 [Mycobacterium tuberculosis
SUMu005]
Length = 469
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 70/170 (41%), Gaps = 10/170 (5%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 146
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 4 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 63
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
NTG + + NTG NTGG + NTG L + NTG + NTG N
Sbjct: 64 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNY 123
Query: 207 NTGGLGLRNCNTGGLGLRNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
+ G R G LG +T + N + G +IVP + A
Sbjct: 124 SNGAF-WRGDYQGLLGFSYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 172
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 156
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 4 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 63
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
NTG + + NTG NTGG + NTG L + NTG + NTG N
Sbjct: 64 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNY 123
Query: 217 NTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSENEPCLVKIKF 268
+ G R G LG +T I+P+ A +AS + I+F
Sbjct: 124 SNGAF-WRGDYQGLLGFSYTST---IIPEFTV-ANIHASGGAGPIIVPSIQF 170
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 96/242 (39%), Gaps = 17/242 (7%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 76
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 4 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 63
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
NTG + + NTG NTGG + NTG L + NTG + NTG N
Sbjct: 64 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNY 123
Query: 137 NTGGLGLRNCNTGGLGLRNCNT--GGLGLRNCNTGG----LGLRNCNTGGLGLRNCNTGG 190
+ G R G LG +T + N + G + + + + L TG
Sbjct: 124 SNGAF-WRGDYQGLLGFSYTSTIIPEFTVANIHASGGAGPIIVPSIQFPAIPLDLSATGH 182
Query: 191 LG---LRNCNTGGLGLR---NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
+G + + + +R + G + +++ LGL +G ++G +I P
Sbjct: 183 IGGFTIPPVSISPITVRIDPVFDLGPITVQDITIPALGLDPATGVTVG-PIFSSGSIIDP 241
Query: 245 KS 246
S
Sbjct: 242 FS 243
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 96/256 (37%), Gaps = 23/256 (8%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 68
GL N TG +G N TG G+ N + G+ N GL N NTG + + NT
Sbjct: 16 GLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNT 75
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
G NTGG + NTG L + NTG + NTG N + G R
Sbjct: 76 GSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQ 134
Query: 129 GGLGLRNCNT--GGLGLRNCNTGG----LGLRNCNTGGLGLRNCNTGGLG---LRNCNTG 179
G LG +T + N + G + + + + L TG +G + +
Sbjct: 135 GLLGFSYTSTIIPEFTVANIHASGGAGPIIVPSIQFPAIPLDLSATGHIGGFTIPPVSIS 194
Query: 180 GLGLR---NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+ +R + G + +++ LGL G+ + + G + + LG N
Sbjct: 195 PITVRIDPVFDLGPITVQDITIPALGLDPAT--GVTVGPIFSSGSIIDPFSLTLLGFINV 252
Query: 237 NTGGLIVPKSKRGAQE 252
N VP + E
Sbjct: 253 N-----VPAIQTAPSE 263
>gi|428170576|gb|EKX39500.1| hypothetical protein GUITHDRAFT_114466 [Guillardia theta CCMP2712]
Length = 164
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 45/144 (31%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 77
GGL GGL GGL GGL GGL GGL
Sbjct: 9 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 68
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
GGL GGL GGL GGL GGL GGL
Sbjct: 69 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 128
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGL 161
GGL GGL GGL
Sbjct: 129 VGGLAEAKDGVGGLAEAKDGVGGL 152
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 45/144 (31%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 87
GGL GGL GGL GGL GGL GGL
Sbjct: 9 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 68
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
GGL GGL GGL GGL GGL GGL
Sbjct: 69 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 128
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGL 171
GGL GGL GGL
Sbjct: 129 VGGLAEAKDGVGGLAEAKDGVGGL 152
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 45/144 (31%)
Query: 38 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 97
GGL GGL GGL GGL GGL GGL
Sbjct: 9 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 68
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
GGL GGL GGL GGL GGL GGL
Sbjct: 69 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 128
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGL 181
GGL GGL GGL
Sbjct: 129 VGGLAEAKDGVGGLAEAKDGVGGL 152
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 45/144 (31%)
Query: 48 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
GGL GGL GGL GGL GGL GGL
Sbjct: 9 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 68
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
GGL GGL GGL GGL GGL GGL
Sbjct: 69 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 128
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGL 191
GGL GGL GGL
Sbjct: 129 VGGLAEAKDGVGGLAEAKDGVGGL 152
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 45/144 (31%)
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
GGL GGL GGL GGL GGL GGL
Sbjct: 9 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 68
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
GGL GGL GGL GGL GGL GGL
Sbjct: 69 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 128
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGL 201
GGL GGL GGL
Sbjct: 129 VGGLAEAKDGVGGLAEAKDGVGGL 152
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 45/144 (31%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
GGL GGL GGL GGL GGL GGL
Sbjct: 9 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 68
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
GGL GGL GGL GGL GGL GGL
Sbjct: 69 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 128
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGL 211
GGL GGL GGL
Sbjct: 129 VGGLAEAKDGVGGLAEAKDGVGGL 152
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 45/144 (31%)
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
GGL GGL GGL GGL GGL GGL
Sbjct: 9 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 68
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
GGL GGL GGL GGL GGL GGL
Sbjct: 69 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 128
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGL 221
GGL GGL GGL
Sbjct: 129 VGGLAEAKDGVGGLAEAKDGVGGL 152
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 45/144 (31%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
GGL GGL GGL GGL GGL GGL
Sbjct: 9 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 68
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
GGL GGL GGL GGL GGL GGL
Sbjct: 69 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 128
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGL 231
GGL GGL GGL
Sbjct: 129 VGGLAEAKDGVGGLAEAKDGVGGL 152
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 47/152 (30%)
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
GGL GGL GGL GGL GGL GGL
Sbjct: 9 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 68
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
GGL GGL GGL GGL GGL GGL
Sbjct: 69 VGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDGVGGLAEAKDG 128
Query: 218 TGGLGLRNCNTGGLGLRNCNTGGLIVPKSKRG 249
GGL GGL GGL K G
Sbjct: 129 VGGLAEAKDGVGGLAEAKDGVGGLTDQVQKLG 160
>gi|354569116|ref|ZP_08988274.1| pentapeptide repeat protein [Fischerella sp. JSC-11]
gi|353538991|gb|EHC08491.1| pentapeptide repeat protein [Fischerella sp. JSC-11]
Length = 477
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 66/197 (33%), Gaps = 16/197 (8%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
LRN + + L N N L LR N L+ N L L N
Sbjct: 199 DLRNTDIRQVDLSNANLQRLDLRGANLTKANLQKANLFAANLEGAKLCSTTLYEANLQSC 258
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
L+ N G L N G LR+ N G LR N L N L++CN L
Sbjct: 259 NLQEANLHGANLNRANLSGANLRSANLSGASLRAANFCEANLYKAN-----LQSCN---L 310
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLGLRNCNTGGLGLRN--- 185
+ N + L L N LG N GL L+ N G L+ N L +
Sbjct: 311 KVANLSKAKLFLANLQGAKLGKANLQETGLIGANLKQANLNGANLQQANLNAAKLEHTEM 370
Query: 186 --CNTGGLGLRNCNTGG 200
N LR N G
Sbjct: 371 FFANLSEASLREANLYG 387
>gi|162448369|ref|YP_001610736.1| PPE family protein [Sorangium cellulosum So ce56]
gi|161158951|emb|CAN90256.1| probable PPE family protein [Sorangium cellulosum So ce56]
Length = 138
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 73
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 102
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 24 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 83
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 44 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 103
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 142
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 163
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 202
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 46/89 (51%)
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 44/86 (51%)
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
R+ N G +G N N G +G N N G +G N N G +G N N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 214 RNCNTGGLGLRNCNTGGLGLRNCNTG 239
N N G +G N N G +G N N G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLG 123
>gi|306792899|ref|ZP_07431201.1| hypothetical protein TMEG_04054, partial [Mycobacterium
tuberculosis SUMu005]
gi|308338662|gb|EFP27513.1| hypothetical protein TMEG_04054 [Mycobacterium tuberculosis
SUMu005]
Length = 380
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
G GL N G G N TG +GL N TG +G+ N TG G+ N T N G
Sbjct: 19 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTGIG 74
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G N G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 75 NTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTG 132
Query: 150 GLGLRNCNTGGL 161
N NTGG
Sbjct: 133 VGNTGNVNTGGF 144
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRNCN 67
GL N G G N TG +GL N TG +G+ N TG G+ N T G+G N
Sbjct: 21 GLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQAN 80
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG NTG N NTG L + NTG + NTG N NTG N N
Sbjct: 81 TGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVN 140
Query: 128 TGGL 131
TGG
Sbjct: 141 TGGF 144
>gi|254413444|ref|ZP_05027214.1| Pentapeptide repeat protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196179551|gb|EDX74545.1| Pentapeptide repeat protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 768
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 64/204 (31%), Gaps = 5/204 (2%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLR--NCNTGGLG---LRNCNTGGLGLRNCNTGG 90
N + LR + G LR+ N L N N L L+N N L+ +
Sbjct: 511 SNLQNINLRRASLIGAKLRHTNLQQADLSHGNLNQAILTGANLKNANLRQTSLQYGDLSE 570
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
+ L N L + L N G L N G L + L N
Sbjct: 571 VDLSEANLSQANLTGADLQRSQLDQANLEGATLEQANLSGASLFRADLSQANLSNAQLNQ 630
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
LR N + LR L N L + L LR + LR+ N
Sbjct: 631 AMLRGANLQEVRLRRAILSHANLEGANLSRADLSRADLSHLNLRGADLSHTFLRHVNLTN 690
Query: 211 LGLRNCNTGGLGLRNCNTGGLGLR 234
LR N G L N N G+ +
Sbjct: 691 ADLRQANLTGANLFNANLSGVKVE 714
>gi|229819861|ref|YP_002881387.1| hypothetical protein Bcav_1366 [Beutenbergia cavernae DSM 12333]
gi|229565774|gb|ACQ79625.1| hypothetical protein Bcav_1366 [Beutenbergia cavernae DSM 12333]
Length = 741
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 38 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 95
GGL C TG GLG+ GGLG+ T GLG+ T GLG+ T GLG+
Sbjct: 156 VGGLRAPVCRTGVGGLGVVAAPVGGLGVVAALTDGLGVVAALTDGLGVVAALTDGLGVVA 215
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
GLG+ GG+ C G R C G L N G
Sbjct: 216 ALAAGLGVVAAPVGGVA--RCPVGAPADRACAHGVLSEENQGVGA 258
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 68 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
GGL C TG GLG+ GGLG+ T GLG+ T GLG+ T GLG+
Sbjct: 156 VGGLRAPVCRTGVGGLGVVAAPVGGLGVVAALTDGLGVVAALTDGLGVVAALTDGLGVVA 215
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
GLG+ GG+ C G R C G L N G
Sbjct: 216 ALAAGLGVVAAPVGGVA--RCPVGAPADRACAHGVLSEENQGVGA 258
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 98 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
GGL C TG GLG+ GGLG+ T GLG+ T GLG+ T GLG+
Sbjct: 156 VGGLRAPVCRTGVGGLGVVAAPVGGLGVVAALTDGLGVVAALTDGLGVVAALTDGLGVVA 215
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
GLG+ GG+ C G R C G L N G
Sbjct: 216 ALAAGLGVVAAPVGGVA--RCPVGAPADRACAHGVLSEENQGVGA 258
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 128 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
GGL C TG GLG+ GGLG+ T GLG+ T GLG+ T GLG+
Sbjct: 156 VGGLRAPVCRTGVGGLGVVAAPVGGLGVVAALTDGLGVVAALTDGLGVVAALTDGLGVVA 215
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
GLG+ GG+ C G R C G L N G
Sbjct: 216 ALAAGLGVVAAPVGGVA--RCPVGAPADRACAHGVLSEENQGVGA 258
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 77
GGLG+ GGLG+ T GLG+ T GLG+ T GLG+ GLG+
Sbjct: 168 VGGLGVVAAPVGGLGVVAALTDGLGVVAALTDGLGVVAALTDGLGVVAALAAGLGVVAAP 227
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
GG+ C G R C G L N G
Sbjct: 228 VGGVA--RCPVGAPADRACAHGVLSEENQGVGA 258
>gi|440800108|gb|ELR21151.1| Hypothetical protein ACA1_283580 [Acanthamoeba castellanii str.
Neff]
Length = 200
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 59/175 (33%), Gaps = 1/175 (0%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TGG +TGG +TGG + GG +TGG + TGG N
Sbjct: 16 TGGAPAEENSTGGAPAEENSTGGTLVEENGNGGAPAEENSTGGALVEENGTGGAPAENGT 75
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G L N L N G N +G L N +G L N +G N
Sbjct: 76 GGALAEENSTGATLAEENGTGGVPAEENGTSGALAEENSTSGVLAEENGTSGAPVEENGT 135
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
G L N G L N TG +TGG +T + GL+
Sbjct: 136 GGTLAEENSTGGTLAEENS-TGSAPAEENSTGGAPAEENSTSSAPAEDSPQAGLV 189
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 58/174 (33%), Gaps = 1/174 (0%)
Query: 18 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 77
TGG +TGG +TGG + GG +TGG + TGG N
Sbjct: 16 TGGAPAEENSTGGAPAEENSTGGTLVEENGNGGAPAEENSTGGALVEENGTGGAPAENGT 75
Query: 78 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
G L N L N G N +G L N +G L N +G N
Sbjct: 76 GGALAEENSTGATLAEENGTGGVPAEENGTSGALAEENSTSGVLAEENGTSGAPVEENGT 135
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
G L N G L N TG +TGG +T + GL
Sbjct: 136 GGTLAEENSTGGTLAEENS-TGSAPAEENSTGGAPAEENSTSSAPAEDSPQAGL 188
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 60/174 (34%), Gaps = 1/174 (0%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 87
TGG +TGG +TGG + GG +TGG + TGG N
Sbjct: 16 TGGAPAEENSTGGAPAEENSTGGTLVEENGNGGAPAEENSTGGALVEENGTGGAPAENGT 75
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
G L N L N G N +G L N +G L N T G +
Sbjct: 76 GGALAEENSTGATLAEENGTGGVPAEENGTSGALAEENSTSGVLAEEN-GTSGAPVEENG 134
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
TGG +TGG +TG +TGG +T + GL
Sbjct: 135 TGGTLAEENSTGGTLAEENSTGSAPAEENSTGGAPAEENSTSSAPAEDSPQAGL 188
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 62/172 (36%), Gaps = 8/172 (4%)
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
TGG +TGG +TGG + GG +TGG + TGG N
Sbjct: 16 TGGAPAEENSTGGAPAEENSTGGTLVEENGNGGAPAEENSTGGALVEENGTGGAPAENGT 75
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G L N L N G N +G L N +G L N T G +
Sbjct: 76 GGALAEENSTGATLAEENGTGGVPAEENGTSGALAEENSTSGVLAEEN-GTSGAPVEENG 134
Query: 228 TGGLGLRNCNTGGLIVPKSKRG---AQEN----ASRSENEPCLVKIKFTPNL 272
TGG +TGG + ++ G A+EN A EN + +P
Sbjct: 135 TGGTLAEENSTGGTLAEENSTGSAPAEENSTGGAPAEENSTSSAPAEDSPQA 186
>gi|254409700|ref|ZP_05023481.1| Pentapeptide repeat protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196183697|gb|EDX78680.1| Pentapeptide repeat protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 448
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 78/260 (30%), Gaps = 36/260 (13%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
+ A + LR G L + + L N N L N L + N L
Sbjct: 73 VEADLREADLREARLAGANLEDADLQNARLANANLFRSKLVKVNLQEADLEDAN-----L 127
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+N N LR N L+N N L+ + L N + G L + N G L
Sbjct: 128 QNANLQFADLRKANLMNASLQNANLTRTNLQETDLRQAKLANASLEGANLGDANLEGTSL 187
Query: 124 RNCNTGGLGLRNCNTGGLGLR----NCNT----------------------GGLGLRNCN 157
R N G L N LR N T G L N
Sbjct: 188 RGVNLKGANLENAKLFRTDLRGTQFNSQTVLNDKWLFVWELVNQGISGQALAGADLSGAN 247
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
GL L N N L + LR N G L N L N + LRN
Sbjct: 248 LEGLNLENANLENANLAEAYLFIVNLRGANLQGTQLTNTELRYADLSNADLTNANLRNAE 307
Query: 218 TGGLGLRNCNTGGLGLRNCN 237
G N N G L N N
Sbjct: 308 LG-----NVNLAGANLENAN 322
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 61/208 (29%), Gaps = 6/208 (2%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 98
G L N GL L N N L + LR N G L N L N +
Sbjct: 239 AGADLSGANLEGLNLENANLENANLAEAYLFIVNLRGANLQGTQLTNTELRYADLSNADL 298
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCN 157
LRN G N N G L N N + T L R G
Sbjct: 299 TNANLRNAELG-----NVNLAGANLENANLRTAKINEETTLDLKWRLVWEIVNQGAEERE 353
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
G L N N G RN N G L N + L N N G L+ N
Sbjct: 354 LRGANLFNANLNGANFRNVNLSGASLYNSDLQNTNFEEATLFQADLSNANLAGANLQKAN 413
Query: 218 TGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
L N G L N I+P
Sbjct: 414 LQEANLEGANLEGANLNQANLCNAILPD 441
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 56/193 (29%), Gaps = 6/193 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N GL L N N L + LR N G L N L N + LRN
Sbjct: 246 ANLEGLNLENANLENANLAEAYLFIVNLRGANLQGTQLTNTELRYADLSNADLTNANLRN 305
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLGLR 134
G N N G L N N + T L R G G L
Sbjct: 306 AELG-----NVNLAGANLENANLRTAKINEETTLDLKWRLVWEIVNQGAEERELRGANLF 360
Query: 135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
N N G RN N G L N + L N N G L+ N L
Sbjct: 361 NANLNGANFRNVNLSGASLYNSDLQNTNFEEATLFQADLSNANLAGANLQKANLQEANLE 420
Query: 195 NCNTGGLGLRNCN 207
N G L N
Sbjct: 421 GANLEGANLNQAN 433
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 57/169 (33%), Gaps = 10/169 (5%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
CN G+ LR N G + N LR + LR G L + + L N
Sbjct: 50 CNLRGVRLRKRNLRGFNIEGANLVEADLREAD-----LREARLAGANLEDADLQNARLAN 104
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N L N L + N L+N N LR N L+N N L+
Sbjct: 105 ANLFRSKLVKVNLQEADLEDAN-----LQNANLQFADLRKANLMNASLQNANLTRTNLQE 159
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
+ L N + G L + N G LR N G L N LR
Sbjct: 160 TDLRQAKLANASLEGANLGDANLEGTSLRGVNLKGANLENAKLFRTDLR 208
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 82/293 (27%), Gaps = 52/293 (17%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A + L+N N LR N L+N N L+ + L N + G L +
Sbjct: 120 ADLEDANLQNANLQFADLRKANLMNASLQNANLTRTNLQETDLRQAKLANASLEGANLGD 179
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLR----NCNT----------------------G 99
N G LR N G L N LR N T
Sbjct: 180 ANLEGTSLRGVNLKGANLENAKLFRTDLRGTQFNSQTVLNDKWLFVWELVNQGISGQALA 239
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
G L N GL L N N L + LR N G L N L N +
Sbjct: 240 GADLSGANLEGLNLENANLENANLAEAYLFIVNLRGANLQGTQLTNTELRYADLSNADLT 299
Query: 160 GLGLRN-----CNTGGLGLRNCNTGGLGLRNCNTGGLGLR-------------------- 194
LRN N G L N N + T L R
Sbjct: 300 NANLRNAELGNVNLAGANLENANLRTAKINEETTLDLKWRLVWEIVNQGAEERELRGANL 359
Query: 195 -NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
N N G RN N G L N + L N N G + K+
Sbjct: 360 FNANLNGANFRNVNLSGASLYNSDLQNTNFEEATLFQADLSNANLAGANLQKA 412
>gi|433642052|ref|YP_007287811.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070008]
gi|432158600|emb|CCK55896.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070008]
Length = 961
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 87/244 (35%), Gaps = 16/244 (6%)
Query: 22 GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
G N G G+ N N G+GL N G+G N G +GL N + +G N G
Sbjct: 278 GFANAGIGNFGIANTGNNNIGIGLTGNNQIGIGGLNSGNGNVGLFNSGSANIGFFNSGNG 337
Query: 80 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G+ N GL N NTG L + NTG + N NTG + N G
Sbjct: 338 NFGIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNANTGSFNAGHYNFGAFNPGPS 397
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---------GLGLRNCNTGGLGLRNCN 187
NTG NTG + NTG + + N G G+ R G L
Sbjct: 398 NTGTFNTGGANTGWFNTGSINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFA-IT 456
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLIVPKS 246
+ L L + G+ + + + L + + N G L L +P +
Sbjct: 457 SPDLTLPSLEIPGISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAA 516
Query: 247 KRGA 250
A
Sbjct: 517 MTPA 520
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 76/190 (40%), Gaps = 7/190 (3%)
Query: 37 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 92
N G + + N GG +G+ N GL N G N G G+ N N G+G
Sbjct: 241 NFGSFNIGSANLGGNNIGIGNAGASNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGIG 300
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 149
L N G+G N G +GL N + +G N G G+ N GL N NTG
Sbjct: 301 LTGNNQIGIGGLNSGNGNVGLFNSGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
L + NTG + N NTG + N G NTG NTG + NTG
Sbjct: 361 FLNAGSFNTGMFDVGNANTGSFNAGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420
Query: 210 GLGLRNCNTG 219
+ + N G
Sbjct: 421 AFNIGDMNNG 430
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 94/233 (40%), Gaps = 15/233 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL N G LG N N +GLRN LG N +G G N + LG N G
Sbjct: 208 GLANVGGGNLG--NAN---IGLRNIGNANLGNNNLGSGNFGSFNIGSANLGGNNIGIGNA 262
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTG 129
G N LG N NT G N G G+ N N G+GL N G+G N G
Sbjct: 263 GASNFGLANLG--NLNT---GFANAGIGNFGIANTGNNNIGIGLTGNNQIGIGGLNSGNG 317
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 186
+GL N + +G N G G+ N GL N NTG L + NTG + N
Sbjct: 318 NVGLFNSGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNA 377
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG + N G NTG NTG + NTG + + N G
Sbjct: 378 NTGSFNAGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNIGDMNNG 430
>gi|340626928|ref|YP_004745380.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340005118|emb|CCC44267.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length = 987
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 87/244 (35%), Gaps = 16/244 (6%)
Query: 22 GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
G N G G+ N N G+GL N G+G N G +GL N + +G N G
Sbjct: 278 GFANAGIGNFGIANTGNNNIGIGLTGNNQIGIGGLNSGNGNVGLFNSGSANIGFFNSGNG 337
Query: 80 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G+ N GL N NTG L + NTG + N NTG + N G
Sbjct: 338 NFGIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNANTGSFNAGHYNFGAFNPGPS 397
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---------GLGLRNCNTGGLGLRNCN 187
NTG NTG + NTG + + N G G+ R G L
Sbjct: 398 NTGTFNTGGANTGWFNTGSINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFA-IT 456
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLIVPKS 246
+ L L + G+ + + + L + + N G L L +P +
Sbjct: 457 SPDLTLPSLEIPGISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAA 516
Query: 247 KRGA 250
A
Sbjct: 517 MTPA 520
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 76/190 (40%), Gaps = 7/190 (3%)
Query: 37 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 92
N G + + N GG +G+ N GL N G N G G+ N N G+G
Sbjct: 241 NFGSFNIGSANLGGNNIGIGNAGASNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGIG 300
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 149
L N G+G N G +GL N + +G N G G+ N GL N NTG
Sbjct: 301 LTGNNQIGIGGLNSGNGNVGLFNSGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
L + NTG + N NTG + N G NTG NTG + NTG
Sbjct: 361 FLNAGSFNTGMFDVGNANTGSFNAGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420
Query: 210 GLGLRNCNTG 219
+ + N G
Sbjct: 421 AFNIGDMNNG 430
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 94/233 (40%), Gaps = 15/233 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL N G LG N N +GLRN LG N +G G N + LG N G
Sbjct: 208 GLANVGGGNLG--NAN---IGLRNIGNANLGNNNLGSGNFGSFNIGSANLGGNNIGIGNA 262
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTG 129
G N LG N NT G N G G+ N N G+GL N G+G N G
Sbjct: 263 GASNFGLANLG--NLNT---GFANAGIGNFGIANTGNNNIGIGLTGNNQIGIGGLNSGNG 317
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 186
+GL N + +G N G G+ N GL N NTG L + NTG + N
Sbjct: 318 NVGLFNSGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNA 377
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG + N G NTG NTG + NTG + + N G
Sbjct: 378 NTGSFNAGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNIGDMNNG 430
>gi|433631035|ref|YP_007264663.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070010]
gi|432162628|emb|CCK60009.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070010]
Length = 987
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 87/244 (35%), Gaps = 16/244 (6%)
Query: 22 GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
G N G G+ N N G+GL N G+G N G +GL N + +G N G
Sbjct: 278 GFANAGIGNFGIANTGNNNIGIGLTGNNQIGIGGLNSGNGNVGLFNSGSANIGFFNSGNG 337
Query: 80 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
G+ N GL N NTG L + NTG + N NTG + N G
Sbjct: 338 NFGIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNANTGSFNAGHYNFGAFNPGPS 397
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---------GLGLRNCNTGGLGLRNCN 187
NTG NTG + NTG + + N G G+ R G L
Sbjct: 398 NTGTFNTGGANTGWFNTGSINTGAFNIGDMNNGLFNTGDMNNGVFYRGVGQGSLQFA-IT 456
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTGGLIVPKS 246
+ L L + G+ + + + L + + N G L L +P +
Sbjct: 457 SPDLTLPSLEIPGISVPAFSLPAITLPSLTIPAVTTPANVTVGAFDLPGLTVPSLTIPAA 516
Query: 247 KRGA 250
A
Sbjct: 517 MTPA 520
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 76/190 (40%), Gaps = 7/190 (3%)
Query: 37 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 92
N G + + N GG +G+ N GL N G N G G+ N N G+G
Sbjct: 241 NFGSFNIGSANLGGNNIGIGNAGASNFGLANLGNLNTGFANAGIGNFGIANTGNNNIGIG 300
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 149
L N G+G N G +GL N + +G N G G+ N GL N NTG
Sbjct: 301 LTGNNQIGIGGLNSGNGNVGLFNSGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTG 360
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
L + NTG + N NTG + N G NTG NTG + NTG
Sbjct: 361 FLNAGSFNTGMFDVGNANTGSFNAGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTG 420
Query: 210 GLGLRNCNTG 219
+ + N G
Sbjct: 421 AFNIGDMNNG 430
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 94/233 (40%), Gaps = 15/233 (6%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL N G LG N N +GLRN LG N +G G N + LG N G
Sbjct: 208 GLANVGGGNLG--NAN---IGLRNIGNANLGNNNLGSGNFGSFNIGSANLGGNNIGIGNA 262
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTG 129
G N LG N NT G N G G+ N N G+GL N G+G N G
Sbjct: 263 GASNFGLANLG--NLNT---GFANAGIGNFGIANTGNNNIGIGLTGNNQIGIGGLNSGNG 317
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 186
+GL N + +G N G G+ N GL N NTG L + NTG + N
Sbjct: 318 NVGLFNSGSANIGFFNSGNGNFGIGNSGNFSTGLFNPGHGNTGFLNAGSFNTGMFDVGNA 377
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG + N G NTG NTG + NTG + + N G
Sbjct: 378 NTGSFNAGHYNFGAFNPGPSNTGTFNTGGANTGWFNTGSINTGAFNIGDMNNG 430
>gi|31792734|ref|NP_855227.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31618324|emb|CAD96242.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length = 678
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 183 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 237
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 238 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 294
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 295 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 354
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 355 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 414
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 321 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 380
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 381 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 439
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 440 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 499
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 500 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 548
>gi|340626569|ref|YP_004745021.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340004759|emb|CCC43903.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length = 678
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 102/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G L + NTG + L + N G L L
Sbjct: 183 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNLGSANTGSVNLGSANIGDLNL 237
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 238 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 294
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 295 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 354
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 355 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 414
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 321 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 380
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 381 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 439
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 440 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 499
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 500 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 548
>gi|261327867|emb|CBH10845.1| nucleoporin (NUP54/57), putative [Trypanosoma brucei gambiense
DAL972]
Length = 725
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 81/240 (33%), Gaps = 38/240 (15%)
Query: 11 KGLRNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLG 62
G TGG G TGG G TGG G TGG G TGG G
Sbjct: 161 AGANTATTGGFGAGANTATTGGFGAGANTATTGGFGAGANTATTGGFGAGANTATTGGFG 220
Query: 63 L--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLG 112
TGG G TGG G TGG G TGG G TGG G
Sbjct: 221 AGANTATTGGFGAGANTATTGGFGAGANTATTGGFGAGANTATTGGFGAGANTATTGGFG 280
Query: 113 L--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLG 162
TGG G TGG G TGG G TGG G TGG G
Sbjct: 281 AGANTATTGGFGAGANTATTGGFGAGANTATTGGFGAGANTATTGGFGAGANTATTGGFG 340
Query: 163 L--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLG 212
TGG G TGG G TGG G TGG G TGG G
Sbjct: 341 AGANTATTGGFGAGANTATTGGFGAGANTATTGGFGAGANTATTGGFGAGANTATTGGFG 400
>gi|428313938|ref|YP_007124915.1| low-complexity protein [Microcoleus sp. PCC 7113]
gi|428255550|gb|AFZ21509.1| putative low-complexity protein [Microcoleus sp. PCC 7113]
Length = 343
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 57/169 (33%), Gaps = 10/169 (5%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N NT L G L N N G L + L N N G L G L
Sbjct: 90 NRNTETADLSGAQISGADLINANLSGADLSGADLINADLINANLSGADL-----SGADLI 144
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
N + G L N + G L + L + G L N N G L N N G L
Sbjct: 145 NADLSGADLINADLSGADLSGADLINANLSSAQLCGADLINANLSGADLINANLSGTDLI 204
Query: 135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
N N G N G LR N G L + N G L+ N G L
Sbjct: 205 NANLSG-----ANLSGANLRYANLSGANLSSANLSGANLKYANLSGADL 248
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 57/169 (33%), Gaps = 10/169 (5%)
Query: 25 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 84
N NT L G L N N G L + L N N G L G L
Sbjct: 90 NRNTETADLSGAQISGADLINANLSGADLSGADLINADLINANLSGADL-----SGADLI 144
Query: 85 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 144
N + G L N + G L + L + G L N N G L N N G L
Sbjct: 145 NADLSGADLINADLSGADLSGADLINANLSSAQLCGADLINANLSGADLINANLSGTDLI 204
Query: 145 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
N N G N G LR N G L + N G L+ N G L
Sbjct: 205 NANLSG-----ANLSGANLRYANLSGANLSSANLSGANLKYANLSGADL 248
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 57/169 (33%), Gaps = 10/169 (5%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 94
N NT L G L N N G L + L N N G L G L
Sbjct: 90 NRNTETADLSGAQISGADLINANLSGADLSGADLINADLINANLSGADL-----SGADLI 144
Query: 95 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 154
N + G L N + G L + L + G L N N G L N N G L
Sbjct: 145 NADLSGADLINADLSGADLSGADLINANLSSAQLCGADLINANLSGADLINANLSGTDLI 204
Query: 155 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 203
N N G N G LR N G L + N G L+ N G L
Sbjct: 205 NANLSG-----ANLSGANLRYANLSGANLSSANLSGANLKYANLSGADL 248
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 57/169 (33%), Gaps = 10/169 (5%)
Query: 45 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 104
N NT L G L N N G L + L N N G L G L
Sbjct: 90 NRNTETADLSGAQISGADLINANLSGADLSGADLINADLINANLSGADL-----SGADLI 144
Query: 105 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
N + G L N + G L + L + G L N N G L N N G L
Sbjct: 145 NADLSGADLINADLSGADLSGADLINANLSSAQLCGADLINANLSGADLINANLSGTDLI 204
Query: 165 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
N N G N G LR N G L + N G L+ N G L
Sbjct: 205 NANLSG-----ANLSGANLRYANLSGANLSSANLSGANLKYANLSGADL 248
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 57/169 (33%), Gaps = 10/169 (5%)
Query: 55 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 114
N NT L G L N N G L + L N N G L G L
Sbjct: 90 NRNTETADLSGAQISGADLINANLSGADLSGADLINADLINANLSGADL-----SGADLI 144
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N + G L N + G L + L + G L N N G L N N G L
Sbjct: 145 NADLSGADLINADLSGADLSGADLINANLSSAQLCGADLINANLSGADLINANLSGTDLI 204
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
N N G N G LR N G L + N G L+ N G L
Sbjct: 205 NANLSG-----ANLSGANLRYANLSGANLSSANLSGANLKYANLSGADL 248
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 57/169 (33%), Gaps = 10/169 (5%)
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
N NT L G L N N G L + L N N G L G L
Sbjct: 90 NRNTETADLSGAQISGADLINANLSGADLSGADLINADLINANLSGADL-----SGADLI 144
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N + G L N + G L + L + G L N N G L N N G L
Sbjct: 145 NADLSGADLINADLSGADLSGADLINANLSSAQLCGADLINANLSGADLINANLSGTDLI 204
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
N N G N G LR N G L + N G L+ N G L
Sbjct: 205 NANLSG-----ANLSGANLRYANLSGANLSSANLSGANLKYANLSGADL 248
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 55/165 (33%), Gaps = 10/165 (6%)
Query: 9 STKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 68
T L G L N N G L + L N N G L G L N +
Sbjct: 94 ETADLSGAQISGADLINANLSGADLSGADLINADLINANLSGADL-----SGADLINADL 148
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
G L N + G L + L + G L N N G L N N G L N N
Sbjct: 149 SGADLINADLSGADLSGADLINANLSSAQLCGADLINANLSGADLINANLSGTDLINANL 208
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
G N G LR N G L + N G L+ N G L
Sbjct: 209 SG-----ANLSGANLRYANLSGANLSSANLSGANLKYANLSGADL 248
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 56/166 (33%), Gaps = 10/166 (6%)
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
N NT L G L N N G L + L N N G L G L
Sbjct: 90 NRNTETADLSGAQISGADLINANLSGADLSGADLINADLINANLSGADL-----SGADLI 144
Query: 135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
N + G L N + G L + L + G L N N G L N N G L
Sbjct: 145 NADLSGADLINADLSGADLSGADLINANLSSAQLCGADLINANLSGADLINANLSGTDLI 204
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
N N G N G LR N G L + N G L+ N G
Sbjct: 205 NANLSG-----ANLSGANLRYANLSGANLSSANLSGANLKYANLSG 245
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 53/153 (34%), Gaps = 10/153 (6%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-----NCNTGGLGLRNCNTGG 60
A IS L N N G L + L N N G L N + G L N + G
Sbjct: 101 AQISGADLINANLSGADLSGADLINADLINANLSGADLSGADLINADLSGADLINADLSG 160
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
L + L + G L N N G L N N G L N N G N G
Sbjct: 161 ADLSGADLINANLSSAQLCGADLINANLSGADLINANLSGTDLINANLSG-----ANLSG 215
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
LR N G L + N G L+ N G L
Sbjct: 216 ANLRYANLSGANLSSANLSGANLKYANLSGADL 248
>gi|306779454|ref|ZP_07417791.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308327594|gb|EFP16445.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 414
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 56/132 (42%), Gaps = 6/132 (4%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
G GL N G G N TG +GL N TG +G+ N TG G+ N T N G
Sbjct: 18 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS----YNTGIG 73
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G N G+ N G G N NTG L + NTG + NTG N NTG
Sbjct: 74 NTGQANTGFFNAGIANTGIGNTG--NYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTG 131
Query: 150 GLGLRNCNTGGL 161
N NTGG
Sbjct: 132 VGNTGNVNTGGF 143
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRNCN 67
GL N G G N TG +GL N TG +G+ N TG G+ N T G+G N
Sbjct: 20 GLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQAN 79
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG NTG N NTG L + NTG + NTG N NTG N N
Sbjct: 80 TGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVN 139
Query: 128 TGGL 131
TGG
Sbjct: 140 TGGF 143
>gi|385994568|ref|YP_005912866.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|422812548|ref|ZP_16860932.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|323719996|gb|EGB29108.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|339294522|gb|AEJ46633.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 679
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 184 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 238
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 239 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 295
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 296 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 355
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 356 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 415
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 322 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 381
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 382 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 440
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 441 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 500
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 501 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 549
>gi|427415458|ref|ZP_18905642.1| putative low-complexity protein [Leptolyngbya sp. PCC 7375]
gi|425756291|gb|EKU97147.1| putative low-complexity protein [Leptolyngbya sp. PCC 7375]
Length = 355
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 49/140 (35%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 87
+ L L + LG + G+ L N L + N G L N LR N
Sbjct: 165 SVELELDRESITELGEEYQHRSGVYLTNVELPNAILYDANLEGANLLGANLECAQLRGAN 224
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
G L N G L N G L N N L N G+ LR N G L N N
Sbjct: 225 LRGAILYEANLRGANLVKANLEGAHLFNANLENATLNALNLEGMDLRATNLKGAHLFNAN 284
Query: 148 TGGLGLRNCNTGGLGLRNCN 167
G L N N G LR N
Sbjct: 285 LEGADLFNANLKGANLREAN 304
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 49/140 (35%)
Query: 48 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
+ L L + LG + G+ L N L + N G L N LR N
Sbjct: 165 SVELELDRESITELGEEYQHRSGVYLTNVELPNAILYDANLEGANLLGANLECAQLRGAN 224
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
G L N G L N G L N N L N G+ LR N G L N N
Sbjct: 225 LRGAILYEANLRGANLVKANLEGAHLFNANLENATLNALNLEGMDLRATNLKGAHLFNAN 284
Query: 168 TGGLGLRNCNTGGLGLRNCN 187
G L N N G LR N
Sbjct: 285 LEGADLFNANLKGANLREAN 304
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 49/140 (35%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
+ L L + LG + G+ L N L + N G L N LR N
Sbjct: 165 SVELELDRESITELGEEYQHRSGVYLTNVELPNAILYDANLEGANLLGANLECAQLRGAN 224
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G L N G L N G L N N L N G+ LR N G L N N
Sbjct: 225 LRGAILYEANLRGANLVKANLEGAHLFNANLENATLNALNLEGMDLRATNLKGAHLFNAN 284
Query: 188 TGGLGLRNCNTGGLGLRNCN 207
G L N N G LR N
Sbjct: 285 LEGADLFNANLKGANLREAN 304
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 49/140 (35%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
+ L L + LG + G+ L N L + N G L N LR N
Sbjct: 165 SVELELDRESITELGEEYQHRSGVYLTNVELPNAILYDANLEGANLLGANLECAQLRGAN 224
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G L N G L N G L N N L N G+ LR N G L N N
Sbjct: 225 LRGAILYEANLRGANLVKANLEGAHLFNANLENATLNALNLEGMDLRATNLKGAHLFNAN 284
Query: 208 TGGLGLRNCNTGGLGLRNCN 227
G L N N G LR N
Sbjct: 285 LEGADLFNANLKGANLREAN 304
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 45/127 (35%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG + G+ L N L + N G L N LR N G L N G
Sbjct: 178 LGEEYQHRSGVYLTNVELPNAILYDANLEGANLLGANLECAQLRGANLRGAILYEANLRG 237
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
L N G L N N L N G+ LR N G L N N G L N N G
Sbjct: 238 ANLVKANLEGAHLFNANLENATLNALNLEGMDLRATNLKGAHLFNANLEGADLFNANLKG 297
Query: 141 LGLRNCN 147
LR N
Sbjct: 298 ANLREAN 304
Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 46/130 (35%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I+ G + G+ L N L + N G L N LR N G L N
Sbjct: 175 ITELGEEYQHRSGVYLTNVELPNAILYDANLEGANLLGANLECAQLRGANLRGAILYEAN 234
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
G L N G L N N L N G+ LR N G L N N G L N N
Sbjct: 235 LRGANLVKANLEGAHLFNANLENATLNALNLEGMDLRATNLKGAHLFNANLEGADLFNAN 294
Query: 128 TGGLGLRNCN 137
G LR N
Sbjct: 295 LKGANLREAN 304
Score = 37.0 bits (84), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 46/133 (34%)
Query: 108 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
+ L L + LG + G+ L N L + N G L N LR N
Sbjct: 165 SVELELDRESITELGEEYQHRSGVYLTNVELPNAILYDANLEGANLLGANLECAQLRGAN 224
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
G L N G L N G L N N L N G+ LR N G L N N
Sbjct: 225 LRGAILYEANLRGANLVKANLEGAHLFNANLENATLNALNLEGMDLRATNLKGAHLFNAN 284
Query: 228 TGGLGLRNCNTGG 240
G L N N G
Sbjct: 285 LEGADLFNANLKG 297
>gi|121637470|ref|YP_977693.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224989944|ref|YP_002644631.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253799397|ref|YP_003032398.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289443002|ref|ZP_06432746.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289447159|ref|ZP_06436903.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289569584|ref|ZP_06449811.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289574232|ref|ZP_06454459.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289750115|ref|ZP_06509493.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289753635|ref|ZP_06513013.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289757664|ref|ZP_06517042.1| predicted protein [Mycobacterium tuberculosis T85]
gi|294996514|ref|ZP_06802205.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|313658435|ref|ZP_07815315.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|339631619|ref|YP_004723261.1| PPE family protein [Mycobacterium africanum GM041182]
gi|378771304|ref|YP_005171037.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|383307403|ref|YP_005360214.1| PPE family protein [Mycobacterium tuberculosis RGTB327]
gi|392432852|ref|YP_006473896.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|424803902|ref|ZP_18229333.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|433626653|ref|YP_007260282.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140060008]
gi|449063623|ref|YP_007430706.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|121493117|emb|CAL71588.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224773057|dbj|BAH25863.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253320900|gb|ACT25503.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289415921|gb|EFD13161.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289420117|gb|EFD17318.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289538663|gb|EFD43241.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289543338|gb|EFD46986.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289690702|gb|EFD58131.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289694222|gb|EFD61651.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289713228|gb|EFD77240.1| predicted protein [Mycobacterium tuberculosis T85]
gi|326903178|gb|EGE50111.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|339330975|emb|CCC26647.1| PPE family protein [Mycobacterium africanum GM041182]
gi|341601488|emb|CCC64161.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356593625|gb|AET18854.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|380721356|gb|AFE16465.1| PPE family protein [Mycobacterium tuberculosis RGTB327]
gi|392054261|gb|AFM49819.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|432154259|emb|CCK51489.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140060008]
gi|440581030|emb|CCG11433.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
gi|449032131|gb|AGE67558.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 678
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 183 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 237
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 238 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 294
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 295 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 354
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 355 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 414
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 321 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 380
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 381 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 439
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 440 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 499
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 500 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 548
>gi|386004530|ref|YP_005922809.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
gi|380725018|gb|AFE12813.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
Length = 678
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 183 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 237
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 238 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 294
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 295 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 354
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 355 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 414
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 321 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 380
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 381 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 439
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 440 ELSTGIGNSGQLSTGWFNSGTTSTGWFNSGTTSTGWFNSGTTNTGIGNSGGNLVTGSMGL 499
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 500 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 548
>gi|254364419|ref|ZP_04980465.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134149933|gb|EBA41978.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
Length = 681
Score = 41.2 bits (95), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 186 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 240
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 241 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 297
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 298 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 357
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 358 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 417
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 324 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 383
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 384 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 442
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 443 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 502
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 503 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSDNINTGFFNSGDLNTG 551
>gi|428304606|ref|YP_007141431.1| pentapeptide repeat-containing protein [Crinalium epipsammum PCC
9333]
gi|428246141|gb|AFZ11921.1| pentapeptide repeat protein [Crinalium epipsammum PCC 9333]
Length = 383
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 65/189 (34%), Gaps = 6/189 (3%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N N G L + + L + N G L N N L N L N N L
Sbjct: 193 NVNFSGANLESTDLSKTDLSDVNFSGANLSNANLKRAKLLQAN-----LSNANLFQANLS 247
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
N L + N G L+ N L N + N G L N G L
Sbjct: 248 EANLIVSHLIDANLLGANLQYTNFTAADLTQANLKNASMANTYFNGAILTKVNLAGASL- 306
Query: 135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
+ N G+ L+N G L N + G L + + G L N G L + N G L
Sbjct: 307 SGNFSGVILKNAKLCGADLSNEDFSGADLSSADLRGANLEYTNLEGANLEDANLSGANLN 366
Query: 195 NCNTGGLGL 203
N N G+ +
Sbjct: 367 NVNLSGVTM 375
>gi|254550567|ref|ZP_05141014.1| PPE family protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|297731103|ref|ZP_06960221.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|298525060|ref|ZP_07012469.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
gi|385990965|ref|YP_005909263.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|424947288|ref|ZP_18362984.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
gi|298494854|gb|EFI30148.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
gi|339298158|gb|AEJ50268.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|358231803|dbj|GAA45295.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
gi|379027786|dbj|BAL65519.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 681
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 186 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 240
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 241 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 297
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 298 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 357
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 358 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 417
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 324 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 383
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 384 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 442
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 443 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 502
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 503 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 551
>gi|158288775|ref|XP_310614.4| AGAP000478-PA [Anopheles gambiae str. PEST]
gi|157018732|gb|EAA06449.4| AGAP000478-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 59/160 (36%), Gaps = 10/160 (6%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 146
G+ L N L LRN N L +CN L C LR N G L +
Sbjct: 162 GVHLSGINLSKLDLRNINFKYACLSHCNLSYANLSWCCLERAELRCANLEGAKLHSVMAA 221
Query: 147 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 204
+ G L+ C+ L N N G L G+ LR N +RNC L
Sbjct: 222 CADLQGAKLKCCDLTRCSLENANMKGATLEGSVMEGVSLRVANLKSANMRNCT-----LN 276
Query: 205 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
+ + G L +C+ G L+ N G L+ L+ P
Sbjct: 277 DADMAGANLESCDLTGCNLKGANLRGANLKGAQLEKLVTP 316
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 59/164 (35%), Gaps = 15/164 (9%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 76
G+ L N L LRN N L +CN L C LR N G L +
Sbjct: 162 GVHLSGINLSKLDLRNINFKYACLSHCNLSYANLSWCCLERAELRCANLEGAKLHSVMAA 221
Query: 77 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
+ G L+ C+ L N N G L G+ LR N +RNC L
Sbjct: 222 CADLQGAKLKCCDLTRCSLENANMKGATLEGSVMEGVSLRVANLKSANMRNCT-----LN 276
Query: 135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
+ + G L +C+ G CN G LR N G L T
Sbjct: 277 DADMAGANLESCDLTG-----CNLKGANLRGANLKGAQLEKLVT 315
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 59/164 (35%), Gaps = 15/164 (9%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 86
G+ L N L LRN N L +CN L C LR N G L +
Sbjct: 162 GVHLSGINLSKLDLRNINFKYACLSHCNLSYANLSWCCLERAELRCANLEGAKLHSVMAA 221
Query: 87 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 144
+ G L+ C+ L N N G L G+ LR N +RNC L
Sbjct: 222 CADLQGAKLKCCDLTRCSLENANMKGATLEGSVMEGVSLRVANLKSANMRNCT-----LN 276
Query: 145 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 188
+ + G L +C+ G CN G LR N G L T
Sbjct: 277 DADMAGANLESCDLTG-----CNLKGANLRGANLKGAQLEKLVT 315
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 59/164 (35%), Gaps = 15/164 (9%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 96
G+ L N L LRN N L +CN L C LR N G L +
Sbjct: 162 GVHLSGINLSKLDLRNINFKYACLSHCNLSYANLSWCCLERAELRCANLEGAKLHSVMAA 221
Query: 97 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 154
+ G L+ C+ L N N G L G+ LR N +RNC L
Sbjct: 222 CADLQGAKLKCCDLTRCSLENANMKGATLEGSVMEGVSLRVANLKSANMRNCT-----LN 276
Query: 155 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+ + G L +C+ G CN G LR N G L T
Sbjct: 277 DADMAGANLESCDLTG-----CNLKGANLRGANLKGAQLEKLVT 315
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 59/164 (35%), Gaps = 15/164 (9%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 106
G+ L N L LRN N L +CN L C LR N G L +
Sbjct: 162 GVHLSGINLSKLDLRNINFKYACLSHCNLSYANLSWCCLERAELRCANLEGAKLHSVMAA 221
Query: 107 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
+ G L+ C+ L N N G L G+ LR N +RNC L
Sbjct: 222 CADLQGAKLKCCDLTRCSLENANMKGATLEGSVMEGVSLRVANLKSANMRNCT-----LN 276
Query: 165 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
+ + G L +C+ G CN G LR N G L T
Sbjct: 277 DADMAGANLESCDLTG-----CNLKGANLRGANLKGAQLEKLVT 315
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 59/164 (35%), Gaps = 15/164 (9%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 116
G+ L N L LRN N L +CN L C LR N G L +
Sbjct: 162 GVHLSGINLSKLDLRNINFKYACLSHCNLSYANLSWCCLERAELRCANLEGAKLHSVMAA 221
Query: 117 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
+ G L+ C+ L N N G L G+ LR N +RNC L
Sbjct: 222 CADLQGAKLKCCDLTRCSLENANMKGATLEGSVMEGVSLRVANLKSANMRNCT-----LN 276
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 218
+ + G L +C+ G CN G LR N G L T
Sbjct: 277 DADMAGANLESCDLTG-----CNLKGANLRGANLKGAQLEKLVT 315
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 59/164 (35%), Gaps = 15/164 (9%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 126
G+ L N L LRN N L +CN L C LR N G L +
Sbjct: 162 GVHLSGINLSKLDLRNINFKYACLSHCNLSYANLSWCCLERAELRCANLEGAKLHSVMAA 221
Query: 127 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
+ G L+ C+ L N N G L G+ LR N +RNC L
Sbjct: 222 CADLQGAKLKCCDLTRCSLENANMKGATLEGSVMEGVSLRVANLKSANMRNCT-----LN 276
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 228
+ + G L +C+ G CN G LR N G L T
Sbjct: 277 DADMAGANLESCDLTG-----CNLKGANLRGANLKGAQLEKLVT 315
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 56/158 (35%), Gaps = 15/158 (9%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-----NTGG 70
N L LRN N L +CN L C LR N G L + + G
Sbjct: 168 INLSKLDLRNINFKYACLSHCNLSYANLSWCCLERAELRCANLEGAKLHSVMAACADLQG 227
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L+ C+ L N N G L G+ LR N +RNC L + + G
Sbjct: 228 AKLKCCDLTRCSLENANMKGATLEGSVMEGVSLRVANLKSANMRNCT-----LNDADMAG 282
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 168
L +C+ G CN G LR N G L T
Sbjct: 283 ANLESCDLTG-----CNLKGANLRGANLKGAQLEKLVT 315
>gi|308373181|ref|ZP_07431301.2| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308374342|ref|ZP_07435680.2| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308375613|ref|ZP_07444506.2| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308376758|ref|ZP_07439927.2| PPE family protein [Mycobacterium tuberculosis SUMu008]
gi|308338567|gb|EFP27418.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308342268|gb|EFP31119.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308345763|gb|EFP34614.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308350063|gb|EFP38914.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
Length = 679
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 184 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 238
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 239 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 295
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 296 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 355
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 356 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 415
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 322 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 381
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 382 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 440
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 441 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 500
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 501 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 549
>gi|297634116|ref|ZP_06951896.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length = 687
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 192 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 246
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 247 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 303
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 304 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 363
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 364 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 423
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 330 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 389
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 390 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 448
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 449 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 508
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 509 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 557
>gi|306779561|ref|ZP_07417898.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|306784292|ref|ZP_07422614.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|306967658|ref|ZP_07480319.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308371996|ref|ZP_07426982.2| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308327495|gb|EFP16346.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308330957|gb|EFP19808.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308334778|gb|EFP23629.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308354717|gb|EFP43568.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
Length = 681
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 186 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 240
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 241 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 297
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 298 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 357
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 358 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 417
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 324 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 383
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 384 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 442
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 443 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 502
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 503 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 551
>gi|306968023|ref|ZP_07480684.1| hypothetical protein TMIG_04078, partial [Mycobacterium
tuberculosis SUMu009]
gi|308354353|gb|EFP43204.1| hypothetical protein TMIG_04078 [Mycobacterium tuberculosis
SUMu009]
Length = 392
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRN 75
G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 21 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 80
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
NTG NTG N NTG L + NTG + NTG N NTG N
Sbjct: 81 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGN 140
Query: 136 CNTGGL 141
NTGG
Sbjct: 141 VNTGGF 146
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRNCN 67
GL N G G N TG +GL N TG +G+ N TG G+ N T G+G N
Sbjct: 23 GLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQAN 82
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG NTG N NTG L + NTG + NTG N NTG N N
Sbjct: 83 TGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVN 142
Query: 128 TGGL 131
TGG
Sbjct: 143 TGGF 146
>gi|306802486|ref|ZP_07439154.1| hypothetical protein TMHG_04066, partial [Mycobacterium
tuberculosis SUMu008]
gi|308350777|gb|EFP39628.1| hypothetical protein TMHG_04066 [Mycobacterium tuberculosis
SUMu008]
Length = 410
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRN 75
G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 21 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 80
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
NTG NTG N NTG L + NTG + NTG N NTG N
Sbjct: 81 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGN 140
Query: 136 CNTGGL 141
NTGG
Sbjct: 141 VNTGGF 146
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRNCN 67
GL N G G N TG +GL N TG +G+ N TG G+ N T G+G N
Sbjct: 23 GLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQAN 82
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG NTG N NTG L + NTG + NTG N NTG N N
Sbjct: 83 TGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVN 142
Query: 128 TGGL 131
TGG
Sbjct: 143 TGGF 146
>gi|434388857|ref|YP_007099468.1| putative low-complexity protein [Chamaesiphon minutus PCC 6605]
gi|428019847|gb|AFY95941.1| putative low-complexity protein [Chamaesiphon minutus PCC 6605]
Length = 256
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 39/103 (37%), Gaps = 5/103 (4%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
+STK + C+ G GL N G L N G L N G LR N G L N
Sbjct: 32 LSTKSCQQCDLAGAGLVTNNLAGAKLERANLAGANLSQANLAGADLRGANLAGASLNGAN 91
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
G LR N G LR+ L N N G+ + G
Sbjct: 92 LTGADLRGANLAGTDLRSAY-----LTNANVSGIDVSAAYLDG 129
>gi|428299466|ref|YP_007137772.1| pentapeptide repeat-containing protein [Calothrix sp. PCC 6303]
gi|428236010|gb|AFZ01800.1| pentapeptide repeat protein [Calothrix sp. PCC 6303]
Length = 501
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 56/169 (33%), Gaps = 20/169 (11%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P VA S L+N N G LR N L NT G+ L N N LR N G
Sbjct: 68 PAVANFSEATLQNVNFSGANLRQAN-----LFKINTSGINLSNANLTNADLREANLSGEQ 122
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-----NCNTGGLGLRNCN 117
N G N L+ + G L N N G L N N G R N
Sbjct: 123 SERPNLTGANFTGANLSLANLKAADFTGANLTNTNLQGATLEATLLVNVNATGADFRLSN 182
Query: 118 TGGLGLRN-----CNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNC 156
+ L+N N G+ + T L R N G + +
Sbjct: 183 FTDVTLQNSIFDLANFSGVSFSDAPLAPGQTANLSFRGANLSGAQIDDA 231
>gi|306784667|ref|ZP_07422989.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308330608|gb|EFP19459.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 401
Score = 40.8 bits (94), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRN 75
G GL N G G N TG +GL N TG +G+ N TG G+ N T G+G
Sbjct: 21 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 80
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
NTG NTG N NTG L + NTG + NTG N NTG N
Sbjct: 81 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGN 140
Query: 136 CNTGGL 141
NTGG
Sbjct: 141 VNTGGF 146
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 55/124 (44%), Gaps = 4/124 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG---GLG-LRNCN 67
GL N G G N TG +GL N TG +G+ N TG G+ N T G+G N
Sbjct: 23 GLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQAN 82
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
TG NTG N NTG L + NTG + NTG N NTG N N
Sbjct: 83 TGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNTGVGNTGNVN 142
Query: 128 TGGL 131
TGG
Sbjct: 143 TGGF 146
>gi|428317602|ref|YP_007115484.1| pentapeptide repeat protein [Oscillatoria nigro-viridis PCC 7112]
gi|428241282|gb|AFZ07068.1| pentapeptide repeat protein [Oscillatoria nigro-viridis PCC 7112]
Length = 204
Score = 40.8 bits (94), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 56/160 (35%), Gaps = 15/160 (9%)
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
CN G L G+ L N L++ N L N N L+ N G+ L +
Sbjct: 55 CNLSGANLSEVFLEGVNLEKAN-----LKDANLWSAHLVNAN-----LKQANFAGVYLIS 104
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
N G L N L + GG LR N LR G+ L N + G L
Sbjct: 105 SNLAGANLEGSNLENAFLEDAYLGGSNLRTAN-----LRGAFMKGIFLVNADLEGANLEG 159
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
N L + N G LRN L N G ++P
Sbjct: 160 ANLWMANLESANLKGANLRNAWLLDTNLAGANLKGAVMPD 199
>gi|15841015|ref|NP_336052.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|148822772|ref|YP_001287526.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|254231776|ref|ZP_04925103.1| PPE family protein [Mycobacterium tuberculosis C]
gi|289745304|ref|ZP_06504682.1| predicted protein [Mycobacterium tuberculosis 02_1987]
gi|375296642|ref|YP_005100909.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|385998338|ref|YP_005916636.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|13881225|gb|AAK45866.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|124600835|gb|EAY59845.1| PPE family protein [Mycobacterium tuberculosis C]
gi|148721299|gb|ABR05924.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|289685832|gb|EFD53320.1| predicted protein [Mycobacterium tuberculosis 02_1987]
gi|328459147|gb|AEB04570.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|344219384|gb|AEN00015.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length = 760
Score = 40.8 bits (94), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 265 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 319
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 320 GSGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGD 376
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 377 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 436
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 437 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 496
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 403 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 462
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 463 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 521
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 522 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 581
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 582 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 630
>gi|75911159|ref|YP_325455.1| pentapeptide repeat-containing protein [Anabaena variabilis ATCC
29413]
gi|75704884|gb|ABA24560.1| Pentapeptide repeat protein [Anabaena variabilis ATCC 29413]
Length = 489
Score = 40.8 bits (94), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 73/222 (32%), Gaps = 5/222 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
L LRN N + L N LR C+ G LR C+ G L G L N
Sbjct: 221 LDLRNINLRRVELLGANLQRADLRGCDFRGADLRGCDFSGANLEGAELAGSILFEANFLK 280
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
L+ N G L GG LR N G LR N G L N L+ N G
Sbjct: 281 ANLQGANIQGANLNRAELGGANLRGANLMGASLRAANLPGANLYKVNLQHAILKLANLSG 340
Query: 141 --LGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
L L N LG L C G L+ N G L N L+
Sbjct: 341 AKLFLANLQGAKLGKANLYLCGLIGANLQGANLNGANLAEANLNAAKLQQTEMLFADFTE 400
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
+ L N G L+ + L CN G L + N
Sbjct: 401 ASLTEADLCKANLMGANLQRASLYQANLSQCNLVGANLSDTN 442
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 46/130 (35%)
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
L LRN N + L N LR C+ G LR C+ G L G L N
Sbjct: 221 LDLRNINLRRVELLGANLQRADLRGCDFRGADLRGCDFSGANLEGAELAGSILFEANFLK 280
Query: 171 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
L+ N G L GG LR N G LR N G L N L+ N G
Sbjct: 281 ANLQGANIQGANLNRAELGGANLRGANLMGASLRAANLPGANLYKVNLQHAILKLANLSG 340
Query: 231 LGLRNCNTGG 240
L N G
Sbjct: 341 AKLFLANLQG 350
>gi|428310861|ref|YP_007121838.1| low-complexity protein [Microcoleus sp. PCC 7113]
gi|428252473|gb|AFZ18432.1| putative low-complexity protein [Microcoleus sp. PCC 7113]
Length = 457
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 64/211 (30%), Gaps = 5/211 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A + T + N G LR N L + N G L++ LRN G L+
Sbjct: 238 ASLQTISADSVNLSGADLRQANLSEANLDHANLKGASLQDGVLIAATLRNSEMSGSKLQG 297
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
G L N G L N + L N L G L + L
Sbjct: 298 ATLKGADLSRANLSGANLENAD-----LTNAKLASTNLTEAQLTGAKLPSSYLFSANLTK 352
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N G+ LR L N G L N N L N L C+ G L N
Sbjct: 353 ANLNGVDLRQALLRSADLTNATLVGATLENANLISTQLTQANLTYSNLTQCDLRGANLTN 412
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
N L + L N N G L N
Sbjct: 413 ANLSNANLTQADLELATLANANLTGANLSNA 443
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 65/213 (30%), Gaps = 6/213 (2%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 94
+ N G LR N L + N G L++ LRN G L+ G L
Sbjct: 247 SVNLSGADLRQANLSEANLDHANLKGASLQDGVLIAATLRNSEMSGSKLQGATLKGADLS 306
Query: 95 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 154
N G L N + L N L G L + L N G+ LR
Sbjct: 307 RANLSGANLENAD-----LTNAKLASTNLTEAQLTGAKLPSSYLFSANLTKANLNGVDLR 361
Query: 155 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
L N G L N N L N L C+ G L N N L
Sbjct: 362 QALLRSADLTNATLVGATLENANLISTQLTQANLTYSNLTQCDLRGANLTNANLSNANLT 421
Query: 215 NCNTGGLGLRNCNTGGLGLRNCNTGGLI-VPKS 246
+ L N N G L N I +P S
Sbjct: 422 QADLELATLANANLTGANLSNAKIEDAIGLPPS 454
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 61/202 (30%), Gaps = 5/202 (2%)
Query: 25 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 84
+ N G LR N L + N G L++ LRN G L+ G L
Sbjct: 247 SVNLSGADLRQANLSEANLDHANLKGASLQDGVLIAATLRNSEMSGSKLQGATLKGADLS 306
Query: 85 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 144
N G L N + L N L G L + L N G+ LR
Sbjct: 307 RANLSGANLENAD-----LTNAKLASTNLTEAQLTGAKLPSSYLFSANLTKANLNGVDLR 361
Query: 145 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 204
L N G L N N L N L C+ G L N N L
Sbjct: 362 QALLRSADLTNATLVGATLENANLISTQLTQANLTYSNLTQCDLRGANLTNANLSNANLT 421
Query: 205 NCNTGGLGLRNCNTGGLGLRNC 226
+ L N N G L N
Sbjct: 422 QADLELATLANANLTGANLSNA 443
>gi|170078630|ref|YP_001735268.1| pentapeptide repeat-containing protein [Synechococcus sp. PCC 7002]
gi|169886299|gb|ACB00013.1| Pentapeptide repeat protein [Synechococcus sp. PCC 7002]
Length = 302
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 69/216 (31%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L++ N N N G L N G LR C G+ + N G LR + G
Sbjct: 85 LQSANASNGHFANSNFSGADLSFANLIGADLRQCCLQGVNFYHTNLIGANLRYSSLLGAN 144
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 152
L L N + + L G L G L +
Sbjct: 145 LSQAQLHRANLSETNLNEVSFNEADLSQANLFEAEVGKGQLYKVKLVGADLTQAHLHHSY 204
Query: 153 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
L N G LR + L N G L N G L + + G L N G
Sbjct: 205 LFGANLQGATLRKTDVRWSNLAYSNLVGADLEGVNLRGADLSHSDLTGASLVGANLRGCL 264
Query: 213 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
L+ N G L N + G+ L N G I+P +R
Sbjct: 265 LQGANLQGCNLENADLEGVALGRVNLQGAIMPDGQR 300
>gi|308370231|ref|ZP_07420739.2| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308324933|gb|EFP13784.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 1221
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 76
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 68 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 122
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 86
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 68 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 122
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 96
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 68 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 122
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 106
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 68 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 122
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 116
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 68 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 122
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 126
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 68 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 122
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 136
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 68 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 122
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 146
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 68 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 122
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 156
G G N +G +GL N TG +G N TG G+ N + G+ N GL N
Sbjct: 8 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 67
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 68 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 122
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGG 70
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 12 FNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGV 71
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
+ + NTG NTGG + NTG L + NTG + NTG
Sbjct: 72 VNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 122
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 68
GL N TG +G N TG G+ N + G+ N GL N NTG + + NT
Sbjct: 20 GLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNT 79
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
G NTGG + NTG L + NTG + NTG
Sbjct: 80 GSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 122
>gi|428211486|ref|YP_007084630.1| putative low-complexity protein [Oscillatoria acuminata PCC 6304]
gi|427999867|gb|AFY80710.1| putative low-complexity protein [Oscillatoria acuminata PCC 6304]
Length = 404
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 86
+ G L CN GL L G+ LR + + L N G L + G L +
Sbjct: 245 DFAGAKLWGCNLQGLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDA 304
Query: 87 NTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
N G L C+ G L+N N LRN N L N G L
Sbjct: 305 NLSGADLHRCSLALASLSGASLKNANLQEANLRNANLSDADLSGANLAGADLHQA 359
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 37 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 96
+ G L CN GL L G+ LR + + L N G L + G L +
Sbjct: 245 DFAGAKLWGCNLQGLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDA 304
Query: 97 NTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
N G L C+ G L+N N LRN N L N G L
Sbjct: 305 NLSGADLHRCSLALASLSGASLKNANLQEANLRNANLSDADLSGANLAGADLHQA 359
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 47 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 106
+ G L CN GL L G+ LR + + L N G L + G L +
Sbjct: 245 DFAGAKLWGCNLQGLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDA 304
Query: 107 NTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
N G L C+ G L+N N LRN N L N G L
Sbjct: 305 NLSGADLHRCSLALASLSGASLKNANLQEANLRNANLSDADLSGANLAGADLHQA 359
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 57 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
+ G L CN GL L G+ LR + + L N G L + G L +
Sbjct: 245 DFAGAKLWGCNLQGLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDA 304
Query: 117 NTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
N G L C+ G L+N N LRN N L N G L
Sbjct: 305 NLSGADLHRCSLALASLSGASLKNANLQEANLRNANLSDADLSGANLAGADLHQA 359
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+ G L CN GL L G+ LR + + L N G L + G L +
Sbjct: 245 DFAGAKLWGCNLQGLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDA 304
Query: 127 NTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
N G L C+ G L+N N LRN N L N G L
Sbjct: 305 NLSGADLHRCSLALASLSGASLKNANLQEANLRNANLSDADLSGANLAGADLHQA 359
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
+ G L CN GL L G+ LR + + L N G L + G L +
Sbjct: 245 DFAGAKLWGCNLQGLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDA 304
Query: 137 NTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
N G L C+ G L+N N LRN N L N G L
Sbjct: 305 NLSGADLHRCSLALASLSGASLKNANLQEANLRNANLSDADLSGANLAGADLHQA 359
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
+ G L CN GL L G+ LR + + L N G L + G L +
Sbjct: 245 DFAGAKLWGCNLQGLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDA 304
Query: 147 NTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
N G L C+ G L+N N LRN N L N G L
Sbjct: 305 NLSGADLHRCSLALASLSGASLKNANLQEANLRNANLSDADLSGANLAGADLHQA 359
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
+ G L CN GL L G+ LR + + L N G L + G L +
Sbjct: 245 DFAGAKLWGCNLQGLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDA 304
Query: 157 NTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
N G L C+ G L+N N LRN N L N G L
Sbjct: 305 NLSGADLHRCSLALASLSGASLKNANLQEANLRNANLSDADLSGANLAGADLHQA 359
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
+ G L CN GL L G+ LR + + L N G L + G L +
Sbjct: 245 DFAGAKLWGCNLQGLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDA 304
Query: 177 NTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 226
N G L C+ G L+N N LRN N L N G L
Sbjct: 305 NLSGADLHRCSLALASLSGASLKNANLQEANLRNANLSDADLSGANLAGADLHQA 359
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 37/106 (34%), Gaps = 5/106 (4%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
CN GL L G+ LR + + L N G L + G L + N G L
Sbjct: 254 CNLQGLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDANLSGADLHR 313
Query: 76 CNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
C+ G L+N N LRN N L N G L
Sbjct: 314 CSLALASLSGASLKNANLQEANLRNANLSDADLSGANLAGADLHQA 359
>gi|282901962|ref|ZP_06309861.1| Pentapeptide repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281193142|gb|EFA68140.1| Pentapeptide repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 275
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 75/229 (32%), Gaps = 11/229 (4%)
Query: 24 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 83
R C+ G+ L + N G+ L N G N G L + NT + N G +
Sbjct: 45 RECDLAGVDLSDANLSGVDLTGANLSG-----ANLSGADLSSLNTDRY-FSDYNFTGTKI 98
Query: 84 RNCNTGGLGLRNCN-TG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
N N G L N TG G R G + G LR + G+ L
Sbjct: 99 DNANFEGANLTGANFTGDRLTGTDFRGAKLPGADFTDAKLAGADLRYIDLRGVKLSGAIL 158
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
G L + N G L L + G+ L L G L N
Sbjct: 159 TGASLDHVNLAGYDLTGVILSNAHLSFADLTGIILIEGTLQDADLTYTELQGANLEGTNL 218
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSK 247
G + N LRN + + N G +R N G+I +S+
Sbjct: 219 SGASITTANLEKAILRNADLEKADISFSNLIGADIRGANLQGIIYTRSE 267
>gi|414078856|ref|YP_006998174.1| endoribonuclease L-PSP [Anabaena sp. 90]
gi|413972272|gb|AFW96361.1| putative endoribonuclease L-PSP [Anabaena sp. 90]
Length = 359
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 60/202 (29%), Gaps = 9/202 (4%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 102
L+ G R+ N G+ L + + L N G L + N L N
Sbjct: 7 LQKYAAGERIFRSVNLRGVDLEGADLSEIDLTGANLAGADLNDANLSKADLDRTNLTRAS 66
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 162
L N N L N L L + G L N N N L N
Sbjct: 67 LINANLSEL----VNGSNLNLTGADLSGANLSKANLDKANFSNANLDNANLSKANLESAN 122
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
N N L N + R + G L + L N G L+ + G
Sbjct: 123 FSNANLDNANLSKANLDSVNFRKASLQGTNLEKADLQTTDLMKANLNGANLKRADLTG-- 180
Query: 223 LRNCNTGGLGLRNCNTGGLIVP 244
N G +N + G I+P
Sbjct: 181 ---VNIYGATFKNADLTGAIMP 199
>gi|121638235|ref|YP_978459.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990729|ref|YP_002645416.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378772086|ref|YP_005171819.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449064417|ref|YP_007431500.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|121493883|emb|CAL72358.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224773842|dbj|BAH26648.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602273|emb|CCC64947.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356594407|gb|AET19636.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449032925|gb|AGE68352.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 468
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 102/247 (41%), Gaps = 20/247 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 209 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 268
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG------------ 122
N +G G +N +G +G N +G +G N +G +G N +G +G
Sbjct: 269 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNF 328
Query: 123 -LRNCNTGG--LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+ NTG +G N +G G N N G+GL G+G N +G +G N
Sbjct: 329 NFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSG 388
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 234
TG +GL N TG +G N T G N G N + GL N NTG
Sbjct: 389 TGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAG 448
Query: 235 NCNTGGL 241
N N G L
Sbjct: 449 NYNFGSL 455
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 100/241 (41%), Gaps = 20/241 (8%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G N +G +G N G +G N +G G N G +G N +G G +N +G +
Sbjct: 226 GDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNLNLGSGNFGSQNLGSGNI 285
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG--LGLRNC 116
G N +G +G N +G +G N +G +G + NTG +G N
Sbjct: 286 GSTNVGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNT 345
Query: 117 NTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
+G G N N G+GL G+G N +G +G N TG +GL N TG +G
Sbjct: 346 GSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFG 405
Query: 175 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGL 231
N T G N G N + GL N NTG N N G L N N+ +
Sbjct: 406 NSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFV 465
Query: 232 G 232
G
Sbjct: 466 G 466
>gi|427739890|ref|YP_007059434.1| putative low-complexity protein [Rivularia sp. PCC 7116]
gi|427374931|gb|AFY58887.1| putative low-complexity protein [Rivularia sp. PCC 7116]
Length = 447
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 83/252 (32%), Gaps = 37/252 (14%)
Query: 4 IVAPISTKGLRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCN-----TGGLGLR 54
I A ++ G RN + L L N G+ L N N LRN + G L
Sbjct: 176 IQAALTVIGRRNASQDPEDKKLDLSNAQLRGVDLSNANLQRADLRNSDLCGACLQGSDLF 235
Query: 55 NCNTGGLGLRNCNTGGLGLRN------------CNTG---GLGLRNCNTGGLGLRNCNTG 99
N G L N + L+ N G G LR+ N G LR N
Sbjct: 236 KANLDGAKLAQSNLYQVNLQQACLRGANLAGAIANKGLFYGANLRDANLVGASLRGANLM 295
Query: 100 GLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLG-LRNCNTGGLG--LRNCNTGGLGLR 154
G L N G L+ N GG L L N + L R TG +G L+ N G LR
Sbjct: 296 GANLYKANLMGANLKAANLGGAKLFLANLQSAKLDKARMHETGLIGANLQQANLNGANLR 355
Query: 155 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
N L+ N LR + G L + L N G
Sbjct: 356 QANLNAARLQQAEVFF-----ANFAEASLREADLSGANLMGTDFQKAVLYETNLSG---A 407
Query: 215 NCNTGGLGLRNC 226
N L L +C
Sbjct: 408 NLTAANLSLTDC 419
>gi|433641702|ref|YP_007287461.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070008]
gi|432158250|emb|CCK55541.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070008]
Length = 678
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 100/239 (41%), Gaps = 15/239 (6%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 64
+A L N GG L +G LGL N G L + NTG + L N N G L L
Sbjct: 184 IAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNLGSANTGSVNLGNANIGDLNLG 238
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
N G L NTG L + NTG L N +G +G N G LG N +G G
Sbjct: 239 GGNIGSYNLGGGNTGDLNPGSGNTGTL---NWGSGNIGSYNLGGGNLGSYNLGSGNTGDT 295
Query: 125 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTG 179
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 296 NFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSH 355
Query: 180 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 356 NIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 414
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 321 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 380
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 381 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 439
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 440 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 499
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 500 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 548
>gi|289750955|ref|ZP_06510333.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289691542|gb|EFD58971.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 646
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 95/245 (38%), Gaps = 20/245 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGL 71
N +G G N +G G N +G +G N +G G L N N G + NTG
Sbjct: 257 NAGSGNTGDYNPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDF 316
Query: 72 GLRNCNTGGL--GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
N G L G N +G G N N G+GL G+G N TG +G N
Sbjct: 317 NFGGGNNGTLNFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSG 376
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
+G N G +G N G G N NTG N NTG N N G
Sbjct: 377 NNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGG 436
Query: 185 NCNTGGL--GLRNC--------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
N N+G G +N NTG + NTG N NTG + NTGG
Sbjct: 437 NSNSGSFNVGFQNTGFGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGG 496
Query: 235 NCNTG 239
N NTG
Sbjct: 497 NVNTG 501
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 207 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 266
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 267 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 326
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 327 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 386
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 387 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 445
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 217 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 276
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 277 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 336
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 337 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 396
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 397 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 451
>gi|428224362|ref|YP_007108459.1| pentapeptide repeat-containing protein [Geitlerinema sp. PCC 7407]
gi|427984263|gb|AFY65407.1| pentapeptide repeat protein [Geitlerinema sp. PCC 7407]
Length = 280
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 45/119 (37%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I+TK ++C+ L + G L+ N L+N N G L N + LR N
Sbjct: 33 INTKQCQSCDLRSADLTAVDLQGADLQGSNLEDAILKNSNLAGANLEGANLKHINLRGAN 92
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G L+ G L + N G+ + G L N L N N G+ L N
Sbjct: 93 LQGANLQKVQLGSANLIDTNLAGVNFERADLRGADLENAILANADLANANFIGVNLENA 151
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 56/155 (36%), Gaps = 5/155 (3%)
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 163
++C+ L + G L+ N L+N N G L N + LR N G L
Sbjct: 39 QSCDLRSADLTAVDLQGADLQGSNLEDAILKNSNLAGANLEGANLKHINLRGANLQGANL 98
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
+ G L + N G+ + G L N L N N G+ L N L
Sbjct: 99 QKVQLGSANLIDTNLAGVNFERADLRGADLENAILANADLANANFIGVNLENAVLSQTNL 158
Query: 224 RNCNTGGLGLRNCNTGGLIVPKSKRGAQENASRSE 258
+ N G N + + P+ + AQ +A E
Sbjct: 159 KGTNLIG---SNIDAASYLSPEVE--AQIHAIYQE 188
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 41/113 (36%)
Query: 24 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 83
++C+ L + G L+ N L+N N G L N + LR N G L
Sbjct: 39 QSCDLRSADLTAVDLQGADLQGSNLEDAILKNSNLAGANLEGANLKHINLRGANLQGANL 98
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
+ G L + N G+ + G L N L N N G+ L N
Sbjct: 99 QKVQLGSANLIDTNLAGVNFERADLRGADLENAILANADLANANFIGVNLENA 151
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 41/113 (36%)
Query: 34 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 93
++C+ L + G L+ N L+N N G L N + LR N G L
Sbjct: 39 QSCDLRSADLTAVDLQGADLQGSNLEDAILKNSNLAGANLEGANLKHINLRGANLQGANL 98
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
+ G L + N G+ + G L N L N N G+ L N
Sbjct: 99 QKVQLGSANLIDTNLAGVNFERADLRGADLENAILANADLANANFIGVNLENA 151
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 41/113 (36%)
Query: 44 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 103
++C+ L + G L+ N L+N N G L N + LR N G L
Sbjct: 39 QSCDLRSADLTAVDLQGADLQGSNLEDAILKNSNLAGANLEGANLKHINLRGANLQGANL 98
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
+ G L + N G+ + G L N L N N G+ L N
Sbjct: 99 QKVQLGSANLIDTNLAGVNFERADLRGADLENAILANADLANANFIGVNLENA 151
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 41/113 (36%)
Query: 54 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 113
++C+ L + G L+ N L+N N G L N + LR N G L
Sbjct: 39 QSCDLRSADLTAVDLQGADLQGSNLEDAILKNSNLAGANLEGANLKHINLRGANLQGANL 98
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
+ G L + N G+ + G L N L N N G+ L N
Sbjct: 99 QKVQLGSANLIDTNLAGVNFERADLRGADLENAILANADLANANFIGVNLENA 151
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 41/113 (36%)
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
++C+ L + G L+ N L+N N G L N + LR N G L
Sbjct: 39 QSCDLRSADLTAVDLQGADLQGSNLEDAILKNSNLAGANLEGANLKHINLRGANLQGANL 98
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
+ G L + N G+ + G L N L N N G+ L N
Sbjct: 99 QKVQLGSANLIDTNLAGVNFERADLRGADLENAILANADLANANFIGVNLENA 151
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 41/113 (36%)
Query: 74 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 133
++C+ L + G L+ N L+N N G L N + LR N G L
Sbjct: 39 QSCDLRSADLTAVDLQGADLQGSNLEDAILKNSNLAGANLEGANLKHINLRGANLQGANL 98
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
+ G L + N G+ + G L N L N N G+ L N
Sbjct: 99 QKVQLGSANLIDTNLAGVNFERADLRGADLENAILANADLANANFIGVNLENA 151
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 41/113 (36%)
Query: 84 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 143
++C+ L + G L+ N L+N N G L N + LR N G L
Sbjct: 39 QSCDLRSADLTAVDLQGADLQGSNLEDAILKNSNLAGANLEGANLKHINLRGANLQGANL 98
Query: 144 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
+ G L + N G+ + G L N L N N G+ L N
Sbjct: 99 QKVQLGSANLIDTNLAGVNFERADLRGADLENAILANADLANANFIGVNLENA 151
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 41/113 (36%)
Query: 94 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 153
++C+ L + G L+ N L+N N G L N + LR N G L
Sbjct: 39 QSCDLRSADLTAVDLQGADLQGSNLEDAILKNSNLAGANLEGANLKHINLRGANLQGANL 98
Query: 154 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
+ G L + N G+ + G L N L N N G+ L N
Sbjct: 99 QKVQLGSANLIDTNLAGVNFERADLRGADLENAILANADLANANFIGVNLENA 151
>gi|306799309|ref|ZP_07437611.1| hypothetical protein TMFG_04033, partial [Mycobacterium
tuberculosis SUMu006]
gi|308340500|gb|EFP29351.1| hypothetical protein TMFG_04033 [Mycobacterium tuberculosis
SUMu006]
Length = 456
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 65/159 (40%), Gaps = 10/159 (6%)
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 157
+GL N TG +G N TG G+ N + G+ N GL N NTG + + N
Sbjct: 2 VGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYN 61
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
TG NTGG + NTG L + NTG + NTG N + G R
Sbjct: 62 TGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDY 120
Query: 218 TGGLGLRNCNT--GGLGLRNCNTGG----LIVPKSKRGA 250
G LG +T + N + G +IVP + A
Sbjct: 121 QGLLGFSYTSTIIPEFTVANIHASGGAGPIIVPSIQFPA 159
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 96/256 (37%), Gaps = 23/256 (8%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 68
GL N TG +G N TG G+ N + G+ N GL N NTG + + NT
Sbjct: 3 GLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNT 62
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 128
G NTGG + NTG L + NTG + NTG N + G R
Sbjct: 63 GSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDYQ 121
Query: 129 GGLGLRNCNT--GGLGLRNCNTGG----LGLRNCNTGGLGLRNCNTGGLG---LRNCNTG 179
G LG +T + N + G + + + + L TG +G + +
Sbjct: 122 GLLGFSYTSTIIPEFTVANIHASGGAGPIIVPSIQFPAIPLDLSATGHIGGFTIPPVSIS 181
Query: 180 GLGLR---NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+ +R + G + +++ LGL G+ + + G + + LG N
Sbjct: 182 PITVRIDPVFDLGPITVQDITIPALGLDPAT--GVTVGPIFSSGSIIDPFSLTLLGFINV 239
Query: 237 NTGGLIVPKSKRGAQE 252
N VP + E
Sbjct: 240 N-----VPAIQTAPSE 250
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 91/231 (39%), Gaps = 17/231 (7%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCN 87
+GL N TG +G N TG G+ N + G+ N GL N NTG + + N
Sbjct: 2 VGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYN 61
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
TG NTGG + NTG L + NTG + NTG N + G R
Sbjct: 62 TGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFISGNYSNGAF-WRGDY 120
Query: 148 TGGLGLRNCNT--GGLGLRNCNTGG----LGLRNCNTGGLGLRNCNTGGLG---LRNCNT 198
G LG +T + N + G + + + + L TG +G + +
Sbjct: 121 QGLLGFSYTSTIIPEFTVANIHASGGAGPIIVPSIQFPAIPLDLSATGHIGGFTIPPVSI 180
Query: 199 GGLGLR---NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
+ +R + G + +++ LGL +G ++G +I P S
Sbjct: 181 SPITVRIDPVFDLGPITVQDITIPALGLDPATGVTVG-PIFSSGSIIDPFS 230
>gi|308370232|ref|ZP_07420740.2| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308324932|gb|EFP13783.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 385
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLIV 243
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG---- 369
Query: 244 PKSKRGA 250
+ +RGA
Sbjct: 370 -RFQRGA 375
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 129
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 369
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 139
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 369
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 96
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 149
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 369
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 159
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 369
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 369
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 199
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 369
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 209
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 369
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 166
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 219
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 369
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 229
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 369
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 119
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 369
>gi|119486435|ref|ZP_01620493.1| hypothetical protein L8106_00535 [Lyngbya sp. PCC 8106]
gi|119456337|gb|EAW37468.1| hypothetical protein L8106_00535 [Lyngbya sp. PCC 8106]
Length = 691
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 74/239 (30%), Gaps = 9/239 (3%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A +S LR N L N L N L N +G
Sbjct: 456 ADLSKANLRKAN-----LSYANLSHAILLEANFQQANLTEANLESAIYNETTYFPIGFEI 510
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
N G + + L+N N G L N G L + L N N LRN
Sbjct: 511 NNAKGYYI----SSKSSLQNANMSGRNLSQFNLAGANLEGADLSQANLTNINLSSANLRN 566
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
N L + N G L G L N L N L+ N + L N
Sbjct: 567 ANLNAAKLNSANLSGAILTGATLQGTELIQINLSNANLSGVNLSQANLQFANLKSVNLNN 626
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
+ G+ + + GG L + + L + G L N GG+ L N G +P
Sbjct: 627 ADLRGVNMIQAHLGGANLISVDLRAANLTGADLTGADLTNAKLGGVNLTNTILKGATMP 685
>gi|383455728|ref|YP_005369717.1| hypothetical protein COCOR_03744 [Corallococcus coralloides DSM
2259]
gi|380729408|gb|AFE05410.1| hypothetical protein COCOR_03744 [Corallococcus coralloides DSM
2259]
Length = 327
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 85/202 (42%), Gaps = 28/202 (13%)
Query: 59 GGLGLRNCNTG---GLGLRNCNTGGLGLR----NCNTGGLGLRNC-NTGGLGLRNCNTGG 110
GG GL +C TG G GL +C TG G R C+ G R + G R+C
Sbjct: 116 GGSGLPDCRTGLHGGAGLSDCRTGSSGARCPAAACDEAGPTRRGSGSPPAQGARSCGQNL 175
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNT 168
R ++GG GL + G G N + GLR GG L N TG GL L C T
Sbjct: 176 SDSRTGSSGGPGLSDSRAGPSGGPNLSDSRTGLR----GGPNLSNSRTGPSGLSLSGCRT 231
Query: 169 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNT---GGLGLRNCNTGGLGLRNCNTGGLGLRN 225
G + N R ++GGL +C T GG GL + TG + GG L +
Sbjct: 232 GFCHVLNL----FDARAGSSGGLIRSDCRTGFCGGAGLSDRWTG-------SCGGADLSD 280
Query: 226 CNTGGLGLRNCNTGGLIVPKSK 247
C TG G G ++P S
Sbjct: 281 CRTGFWGAPPPGRFGDLLPFSS 302
>gi|416374431|ref|ZP_11683193.1| hypothetical protein CWATWH0003_0051 [Crocosphaera watsonii WH
0003]
gi|357266721|gb|EHJ15312.1| hypothetical protein CWATWH0003_0051 [Crocosphaera watsonii WH
0003]
Length = 279
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 82/251 (32%), Gaps = 26/251 (10%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I A + + L + + G L+N + + L N LR N + L + L
Sbjct: 22 IYARLLSAKLIDADLTGANLQNADLSWVDLENATLASADLRGANLKQVNLSYADLTSANL 81
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNT 118
N G L + L N G+ L N + LR + L +
Sbjct: 82 SGANLTGAILNGAKLNRVDLSYANLSGVDLSGANLSRSDLSYVDLREADLTNANLYKADI 141
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN------TGGLG 172
L N + L+ N L+ N GG LR N + L N G +
Sbjct: 142 SQSKLHNTDFQEAFLQGANFSRANLKGANLGGASLREVNLSLVNLSEFNLQRVTRVGEID 201
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTG-GL---------GLRNCNTGGLGLRNCNTGGLG 222
L + N L+ N G LR+ N G GL LR N R CN
Sbjct: 202 LSSAN-----LQKANLQGAILRHANLGYGLLYCTFLNHCILRGANLIDASFRGCNFRNAN 256
Query: 223 LRNCNTGGLGL 233
RN N + L
Sbjct: 257 FRNSNISEINL 267
>gi|428211251|ref|YP_007084395.1| putative low-complexity protein [Oscillatoria acuminata PCC 6304]
gi|427999632|gb|AFY80475.1| putative low-complexity protein [Oscillatoria acuminata PCC 6304]
Length = 269
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 54/160 (33%)
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
LR+ + L L + G L N G L N N G L N L + + G+
Sbjct: 21 DLRDAHLTRLNLSGADLSGAKLMFANLNGTNLSNANLSGAELSFANFVAADLISSDLSGV 80
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
+ N L + GG L N L N G L N G L + G+
Sbjct: 81 DAKGVNFLDAKLNHAQLGGADLVFANLVNTNLEEANLSGASLEGANLIGANLNSTQMNGI 140
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
L N G +RN N L N L + N G+
Sbjct: 141 NLSGANLGHAQIRNANLSNADLSNARLVEADLSDTNLSGV 180
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 54/161 (33%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
LR+ + L L + G L N G L N N G L N L + + G+
Sbjct: 21 DLRDAHLTRLNLSGADLSGAKLMFANLNGTNLSNANLSGAELSFANFVAADLISSDLSGV 80
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
+ N L + GG L N L N G L N G L + G+
Sbjct: 81 DAKGVNFLDAKLNHAQLGGADLVFANLVNTNLEEANLSGASLEGANLIGANLNSTQMNGI 140
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
L N G +RN N L N L + N G+
Sbjct: 141 NLSGANLGHAQIRNANLSNADLSNARLVEADLSDTNLSGVN 181
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 54/161 (33%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
LR+ + L L + G L N G L N N G L N L + + G+
Sbjct: 21 DLRDAHLTRLNLSGADLSGAKLMFANLNGTNLSNANLSGAELSFANFVAADLISSDLSGV 80
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
+ N L + GG L N L N G L N G L + G+
Sbjct: 81 DAKGVNFLDAKLNHAQLGGADLVFANLVNTNLEEANLSGASLEGANLIGANLNSTQMNGI 140
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
L N G +RN N L N L + N G+
Sbjct: 141 NLSGANLGHAQIRNANLSNADLSNARLVEADLSDTNLSGVN 181
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 54/161 (33%)
Query: 52 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
LR+ + L L + G L N G L N N G L N L + + G+
Sbjct: 21 DLRDAHLTRLNLSGADLSGAKLMFANLNGTNLSNANLSGAELSFANFVAADLISSDLSGV 80
Query: 112 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
+ N L + GG L N L N G L N G L + G+
Sbjct: 81 DAKGVNFLDAKLNHAQLGGADLVFANLVNTNLEEANLSGASLEGANLIGANLNSTQMNGI 140
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 212
L N G +RN N L N L + N G+
Sbjct: 141 NLSGANLGHAQIRNANLSNADLSNARLVEADLSDTNLSGVN 181
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 54/161 (33%)
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
LR+ + L L + G L N G L N N G L N L + + G+
Sbjct: 21 DLRDAHLTRLNLSGADLSGAKLMFANLNGTNLSNANLSGAELSFANFVAADLISSDLSGV 80
Query: 122 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
+ N L + GG L N L N G L N G L + G+
Sbjct: 81 DAKGVNFLDAKLNHAQLGGADLVFANLVNTNLEEANLSGASLEGANLIGANLNSTQMNGI 140
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 222
L N G +RN N L N L + N G+
Sbjct: 141 NLSGANLGHAQIRNANLSNADLSNARLVEADLSDTNLSGVN 181
>gi|254416808|ref|ZP_05030557.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176354|gb|EDX71369.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 1492
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 83/252 (32%), Gaps = 29/252 (11%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
+S + R N L CNT LRNCN L N + LR N G L
Sbjct: 283 DLSDRDFRGYNFSNAAL--CNTK---LRNCNFSDANLENVSLNRADLRGANFLGANL--- 334
Query: 67 NTGG---LGLRNCNTG-------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
TG L + + NT L N +T L L+ + GL L L L +
Sbjct: 335 -TGADLRLSVIDENTQFDPKWKLFWQLANQDTQNLELQEQDLQGLKL-----IALELTDV 388
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
N G L+ + L + L + + G + N G L + G L
Sbjct: 389 NFSGANLKKGSFNSSTLTRIDFSQADLESVDFTGTKFNSINFSGANLTDAEMSGADLHEM 448
Query: 177 NTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N G L N LRN N LR N L N L + G
Sbjct: 449 NLQGATLVKVYLCNGNLSSQNLRNQNLSEANLREANLSHADLSGANLSQANLNRSDLTGA 508
Query: 232 GLRNCNTGGLIV 243
L++ N + +
Sbjct: 509 NLQDANLEMVAI 520
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 82/256 (32%), Gaps = 36/256 (14%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGG---------LGLRNCNTG-------GLGLRNC 56
LRNCN L N + LR N G L + + NT L N
Sbjct: 304 LRNCNFSDANLENVSLNRADLRGANFLGANLTGADLRLSVIDENTQFDPKWKLFWQLANQ 363
Query: 57 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
+T L L+ + GL L L L + N G L+ + L + L +
Sbjct: 364 DTQNLELQEQDLQGLKL-----IALELTDVNFSGANLKKGSFNSSTLTRIDFSQADLESV 418
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGL 171
+ G + N G L + G L N G L N LRN N
Sbjct: 419 DFTGTKFNSINFSGANLTDAEMSGADLHEMNLQGATLVKVYLCNGNLSSQNLRNQNLSEA 478
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-------RNCNTGGLGLR 224
LR N L N L + G L++ N + + C+ L
Sbjct: 479 NLREANLSHADLSGANLSQANLNRSDLTGANLQDANLEMVAITGAILQGTTCDRANFSLI 538
Query: 225 NC---NTGGLGLRNCN 237
+C N + L+N N
Sbjct: 539 SCHQVNFSQISLQNAN 554
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 74/254 (29%), Gaps = 28/254 (11%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
L N N G+ LR CN L N L N N G L N L N N G
Sbjct: 909 LENANFAGMDLRGCNFSHANLTAANLENANLENANLEGANLEEAN-----LENANLNGAN 963
Query: 73 LRN----------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL--------R 114
L+ N G L N G L + G L R
Sbjct: 964 LKQLEGNYANFCGANFVGADLSYAEFEDSSFSEANLTGANLSHGTFNGAYLQGACLRDAR 1023
Query: 115 NCN-TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
C+ T N L N + G L+ C L+N N G L N G L
Sbjct: 1024 LCHVTFDWSDDGTNLEEADLENADLEGANLQGCYLSNANLKNINWTGAKLDNVELQGANL 1083
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
+ + + + LR N G R N + N G+ LR N G
Sbjct: 1084 QGADLSKVA----QFVEVALRGANLQGANFRGLNLSRSYWQGVNLSGVDLRGANLQGAHF 1139
Query: 234 RNCNTGGLIVPKSK 247
+C K
Sbjct: 1140 ADCQIDDSTQWDEK 1153
>gi|427719961|ref|YP_007067955.1| pentapeptide repeat-containing protein [Calothrix sp. PCC 7507]
gi|427352397|gb|AFY35121.1| pentapeptide repeat protein [Calothrix sp. PCC 7507]
Length = 256
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 56/144 (38%), Gaps = 15/144 (10%)
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
+NC+ G GL + G L N G L N G LR N G GL N G L
Sbjct: 39 QNCDLTGAGLVLADLSGANLSGANLAGANLSRANLSGADLRGANFSGAGLFGVNLSGAKL 98
Query: 194 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-TGGLGL-------RNCNTGGLIVPK 245
N G LRN L N G+ L + N G +G+ T G V +
Sbjct: 99 SGANLAGADLRNTY-----LVNAELNGVNLNSTNLQGAIGIPTQIATPEEFYTWG--VAE 151
Query: 246 SKRGAQENASRSENEPCLVKIKFT 269
+++G Q+ A N+ +K +
Sbjct: 152 AQKGNQQQAIAYFNQAIAIKADYA 175
>gi|183984524|ref|YP_001852815.1| PPE family protein [Mycobacterium marinum M]
gi|183177850|gb|ACC42960.1| PPE family protein [Mycobacterium marinum M]
Length = 668
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 41 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCN- 97
G N N+G +G N +G N +G +G N N G+GL + G+ N
Sbjct: 316 FGFGNTNSGNVGFGNLGANNVGFGNLGSGNVGFGNTGNNNFGIGLSGNDQVGINFNGLNG 375
Query: 98 -TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
+G +GL N +G N G G+ N G+ N + G N + G+ N
Sbjct: 376 GSGNIGLFNSGNNNVGFFNSGDGNWGIGNSGDTNTGIGNSGSFNTGFVNAASLNTGMANS 435
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
LG+ N G +G N +GL N + +G N +G +G N +G N
Sbjct: 436 ANTCLGVGNSGAGDVGFMNAGHDNVGLGNAGSFNMGFGNAGSGNVGYENAGGANVGFGNS 495
Query: 217 ---NTGGLGLRNCNTGGLGLRNCNTG 239
NTG L + NTG L + NTG
Sbjct: 496 GSDNTGFLNSGSVNTGFLNSGSTNTG 521
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 94/234 (40%), Gaps = 9/234 (3%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCN 77
G G R N G N N+G +G N +G N +G +G N N G+GL +
Sbjct: 307 GDGNRGSNN--FGFGNTNSGNVGFGNLGANNVGFGNLGSGNVGFGNTGNNNFGIGLSGND 364
Query: 78 TGGLGLRNCN--TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
G+ N +G +GL N +G N G G+ N G+ N + G N
Sbjct: 365 QVGINFNGLNGGSGNIGLFNSGNNNVGFFNSGDGNWGIGNSGDTNTGIGNSGSFNTGFVN 424
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
+ G+ N LG+ N G +G N +GL N + +G N +G +G N
Sbjct: 425 AASLNTGMANSANTCLGVGNSGAGDVGFMNAGHDNVGLGNAGSFNMGFGNAGSGNVGYEN 484
Query: 196 CNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKS 246
+G N NTG L + NTG L + NTG NTG I S
Sbjct: 485 AGGANVGFGNSGSDNTGFLNSGSVNTGFLNSGSTNTGAGNSGEVNTGFGIATDS 538
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 88/216 (40%), Gaps = 9/216 (4%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNT 68
G R N G N N+G +G N +G N +G +G N N G+GL +
Sbjct: 308 DGNRGSNN--FGFGNTNSGNVGFGNLGANNVGFGNLGSGNVGFGNTGNNNFGIGLSGNDQ 365
Query: 69 GGLGLRNCN--TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G+ N +G +GL N +G N G G+ N G+ N + G N
Sbjct: 366 VGINFNGLNGGSGNIGLFNSGNNNVGFFNSGDGNWGIGNSGDTNTGIGNSGSFNTGFVNA 425
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
+ G+ N LG+ N G +G N +GL N + +G N +G +G N
Sbjct: 426 ASLNTGMANSANTCLGVGNSGAGDVGFMNAGHDNVGLGNAGSFNMGFGNAGSGNVGYENA 485
Query: 187 NTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 219
+G N NTG L + NTG L + NTG
Sbjct: 486 GGANVGFGNSGSDNTGFLNSGSVNTGFLNSGSTNTG 521
>gi|449265720|gb|EMC76869.1| Translation initiation factor IF-2, partial [Columba livia]
Length = 155
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
G G R G R + G G R + G G R + G G R + G G R +
Sbjct: 4 GAGSRG-----WGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 58
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G G R + G G R + G G R + G G R + G G R + G G R +
Sbjct: 59 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 118
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
G G R + G G R + G G R + G G R
Sbjct: 119 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCR 153
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 30 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 89
G G R G R + G G R + G G R + G G R + G G R +
Sbjct: 4 GAGSRG-----WGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 58
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G G R + G G R + G G R + G G R + G G R + G G R +
Sbjct: 59 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 118
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
G G R + G G R + G G R + G G R
Sbjct: 119 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCR 153
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 40 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 99
G G R G R + G G R + G G R + G G R + G G R +
Sbjct: 4 GAGSRG-----WGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 58
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
G G R + G G R + G G R + G G R + G G R + G G R +
Sbjct: 59 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 118
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
G G R + G G R + G G R + G G R
Sbjct: 119 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCR 153
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 109
G G R G R + G G R + G G R + G G R + G G R +
Sbjct: 4 GAGSRG-----WGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 58
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 169
G G R + G G R + G G R + G G R + G G R + G G R +
Sbjct: 59 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 118
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 204
G G R + G G R + G G R + G G R
Sbjct: 119 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCR 153
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 60 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 119
G G R G R + G G R + G G R + G G R + G G R +
Sbjct: 4 GAGSRG-----WGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 58
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G G R + G G R + G G R + G G R + G G R + G G R +
Sbjct: 59 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 118
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
G G R + G G R + G G R + G G R
Sbjct: 119 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCR 153
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G G R G R + G G R + G G R + G G R + G G R +
Sbjct: 4 GAGSRG-----WGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 58
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
G G R + G G R + G G R + G G R + G G R + G G R +
Sbjct: 59 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 118
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
G G R + G G R + G G R + G G R
Sbjct: 119 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCR 153
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 139
G G R G R + G G R + G G R + G G R + G G R +
Sbjct: 4 GAGSRG-----WGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 58
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
G G R + G G R + G G R + G G R + G G R + G G R +
Sbjct: 59 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 118
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 234
G G R + G G R + G G R + G G R
Sbjct: 119 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCR 153
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 58/149 (38%), Gaps = 5/149 (3%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
G G R G R + G G R + G G R + G G R + G G R +
Sbjct: 4 GAGSRG-----WGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 58
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 209
G G R + G G R + G G R + G G R + G G R + G G R +
Sbjct: 59 GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSR 118
Query: 210 GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 238
G G R + G G R + G G R +
Sbjct: 119 GWGCRGAGSRGWGCRGAGSRGWGCRGAGS 147
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 60/153 (39%), Gaps = 5/153 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G R G G R G G R + G G R + G G R + G G R + G
Sbjct: 6 GSRGWGCRGAGSR-----GWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGW 60
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G R + G G R + G G R + G G R + G G R + G G R + G
Sbjct: 61 GCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCRGAGSRGW 120
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
G R + G G R + G G R + G G R
Sbjct: 121 GCRGAGSRGWGCRGAGSRGWGCRGAGSRGWGCR 153
>gi|262189351|gb|ACY30370.1| aryl hydrocarbon receptor 1 beta-like protein [Salmo salar]
Length = 1166
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 63/207 (30%), Gaps = 1/207 (0%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
+ C G L N N G N N G N N G N N G N N G
Sbjct: 796 QDYSYCPPGETTL-NSNPPGETTLNSNPPGEYTLNSNPTGETTLNSNPPGEYTLNSNPTG 854
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
N N G N N G N N G N N G N N G N N G
Sbjct: 855 ETTLNSNPPGETTLNSNPPGESTLNSNPTGETTLNSNPTGETTLNSNPPGETTLNSNPPG 914
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N N G N N G N N G N N G N N G N N G
Sbjct: 915 ETTLNSNPPGETTLNSNPTGETTLNSNPTGETTLNSNPPGESTLNSNPPGESTLNSNPTG 974
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCN 217
N N G N N G N N
Sbjct: 975 ETTLNSNPPGESTLNSNRTGETTLNSN 1001
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 59/193 (30%)
Query: 35 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 94
N N G N N G N N G N N G N N G N N G
Sbjct: 809 NSNPPGETTLNSNPPGEYTLNSNPTGETTLNSNPPGEYTLNSNPTGETTLNSNPPGETTL 868
Query: 95 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 154
N N G N N G N N G N N G N N G N N G
Sbjct: 869 NSNPPGESTLNSNPTGETTLNSNPTGETTLNSNPPGETTLNSNPPGETTLNSNPPGETTL 928
Query: 155 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 214
N N G N N G N N G N N G N N G N N G
Sbjct: 929 NSNPTGETTLNSNPTGETTLNSNPPGESTLNSNPPGESTLNSNPTGETTLNSNPPGESTL 988
Query: 215 NCNTGGLGLRNCN 227
N N G N N
Sbjct: 989 NSNRTGETTLNSN 1001
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 59/193 (30%)
Query: 45 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 104
N N G N N G N N G N N G N N G N N G
Sbjct: 809 NSNPPGETTLNSNPPGEYTLNSNPTGETTLNSNPPGEYTLNSNPTGETTLNSNPPGETTL 868
Query: 105 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
N N G N N G N N G N N G N N G N N G
Sbjct: 869 NSNPPGESTLNSNPTGETTLNSNPTGETTLNSNPPGETTLNSNPPGETTLNSNPPGETTL 928
Query: 165 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
N N G N N G N N G N N G N N G N N G
Sbjct: 929 NSNPTGETTLNSNPTGETTLNSNPPGESTLNSNPPGESTLNSNPTGETTLNSNPPGESTL 988
Query: 225 NCNTGGLGLRNCN 237
N N G N N
Sbjct: 989 NSNRTGETTLNSN 1001
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 54/176 (30%)
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
N N G N N G N N G N N G N N G N N G
Sbjct: 809 NSNPPGETTLNSNPPGEYTLNSNPTGETTLNSNPPGEYTLNSNPTGETTLNSNPPGETTL 868
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 184
N N G N N G N N G N N G N N G N N G
Sbjct: 869 NSNPPGESTLNSNPTGETTLNSNPTGETTLNSNPPGETTLNSNPPGETTLNSNPPGETTL 928
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
N N G N N G N N G N N G N N G N N G
Sbjct: 929 NSNPTGETTLNSNPTGETTLNSNPPGESTLNSNPPGESTLNSNPTGETTLNSNPPG 984
>gi|443489347|ref|YP_007367494.1| PPE family protein [Mycobacterium liflandii 128FXT]
gi|442581844|gb|AGC60987.1| PPE family protein [Mycobacterium liflandii 128FXT]
Length = 728
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 101/250 (40%), Gaps = 28/250 (11%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + LG N G +GL N G G+GL + G G N +G GL N
Sbjct: 345 GFGNSGSFNLGFGNTGDGNIGLANTGNGNIGIGLTGADQIGFGGWNSGSGNSGLFNSGND 404
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGG--LGLRNCNTGGLGLRNCNTG 119
G N + G+ N + G+ N NTGG GL N T G N
Sbjct: 405 NSGFFNSGSHNWGVANTGSTNWGMANSGSVNTGIGNTGGTNTGLWNAGTANTGSLNAGMN 464
Query: 120 GLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGL 171
+GL N LG N ++ +G+ N +G+ N +G LGL N NTG
Sbjct: 465 NVGLGNSGVADLGAFNSGGNTKHSHDIGIFNAGQHNVGMFNAGSGNLGLSNAGIDNTGAF 524
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT--G 229
N+GG G+ G G + NTG NTG N NTG N NT G
Sbjct: 525 -----NSGGNGVSPIFPGAPG-QAGNTGFFNSGFTNTGLFNSGNTNTGLWNAGNVNTGFG 578
Query: 230 GLGLRNCNTG 239
G+G + N+G
Sbjct: 579 GIGTYSGNSG 588
>gi|302142593|emb|CBI19796.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 74/207 (35%), Gaps = 21/207 (10%)
Query: 45 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 104
NC G R C + NCN G C T L NC G NC G+
Sbjct: 53 NCKRPGHFARECPNVAI-CNNCNLPGHIASECTTQSLCW-NCREPGHMASNCPNEGI-CH 109
Query: 105 NCNTGGLGLRNCNTGGL---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+CN G R+C T GL LR CN NC G +C T +NC G
Sbjct: 110 SCNKTGHRARDCPTPGLPSGDLRLCN-------NCYKQGHIAADC-TNDKACKNCRKTGH 161
Query: 162 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNCNTGGLGLRNCNTGGLGLRN 215
R+C + CN G R C + G RN + R+CN G R+
Sbjct: 162 IARDCQNEPV-CNLCNIAGHVARQCPKAEIFGERGGGGRNTGFRDVICRSCNQVGHMSRD 220
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTGGLI 242
C + NC G C +G +
Sbjct: 221 CMVSLVICNNCGGRGHMAFECPSGRFM 247
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 80/225 (35%), Gaps = 22/225 (9%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + R + G L NC G R C + NCN G C T L N
Sbjct: 35 APYRRESRRGFSQGNL-CNNCKRPGHFARECPNVAI-CNNCNLPGHIASECTTQSLCW-N 91
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLGLRNCNTGGLG 122
C G NC G+ +CN G R+C T GL LR CN NC G
Sbjct: 92 CREPGHMASNCPNEGI-CHSCNKTGHRARDCPTPGLPSGDLRLCN-------NCYKQGHI 143
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNC 176
+C T +NC G R+C + CN G R C + G RN
Sbjct: 144 AADC-TNDKACKNCRKTGHIARDCQNEPV-CNLCNIAGHVARQCPKAEIFGERGGGGRNT 201
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ R+CN G R+C + NC G C +G
Sbjct: 202 GFRDVICRSCNQVGHMSRDCMVSLVICNNCGGRGHMAFECPSGRF 246
>gi|183984290|ref|YP_001852581.1| PPE family protein [Mycobacterium marinum M]
gi|183177616|gb|ACC42726.1| PPE family protein [Mycobacterium marinum M]
Length = 1106
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 75/195 (38%), Gaps = 13/195 (6%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNC 106
G+G N G LG N T +G N +G N +G G N NTG R+
Sbjct: 382 GIGALNSGAGNLGFGNSGTNNIGFFNSGDNNIGFFNSGSGNFGFENAGDINTGFWNGRDT 441
Query: 107 NT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
NT G GL N G G+ N G G N G GL NTG N NTG
Sbjct: 442 NTGFGNSGLSNFGFGNSGVNNVGAGNGGSSNVGLGNAGL--LNTGSFNSGNFNTGDFNSG 499
Query: 165 NCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG NT GL N NTG + NTG + + G RN +G
Sbjct: 500 SMNTGYFNSSGHNT---GLGNSGFTNTGFFNSGDLNTGMGSPEDQSVANSGFRNAGSGNS 556
Query: 222 GLRNCNTGGLGLRNC 236
G N + G N
Sbjct: 557 GFNNTGSFSSGFFNS 571
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 93/253 (36%), Gaps = 22/253 (8%)
Query: 1 MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
+P + P G+ N G LGL N +G N +G G N G +G N +G
Sbjct: 676 LPALDLPAPNLGIGNAGVGNLGLGN-----IGDYNLGSGNTGDANFGFGNIGQANLGSGN 730
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
G N +G G N +G +G N +G G N G G N +G G N +G
Sbjct: 731 AGNTNLGSGNTGSTNFGSGNIGALNLGSGNHGDANLGFGNFGNGNIGSGNHGAGNFGSGN 790
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNC-----------------NTGGLGLRNCNTGGLGL 163
G RN +G G N +G G N N G GL N G+G
Sbjct: 791 TGSRNLGSGNAGSTNFGSGNHGNSNVGLGNFGNNNLGLGNNGSNNIGFGLTGDNLVGIGA 850
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
N G LG N +GL N +G N G GL N GL N + G
Sbjct: 851 LNSGAGNLGFGNTGDNNIGLFNSGDNNVGFFNSGDGNFGLANSGDTNTGLWNAGSTNTGF 910
Query: 224 RNCNTGGLGLRNC 236
N + G N
Sbjct: 911 GNAGSADFGFGNA 923
>gi|225458095|ref|XP_002279453.1| PREDICTED: zinc finger protein GIS2-like isoform 1 [Vitis vinifera]
Length = 254
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 81/228 (35%), Gaps = 22/228 (9%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
AP + R + G L NC G R C + NCN G C T L N
Sbjct: 35 APYRRESRRGFSQGNL-CNNCKRPGHFARECPNVAI-CNNCNLPGHIASECTTQSLCW-N 91
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---GLRNCNTGGLGLRNCNTGGLG 122
C G NC G+ +CN G R+C T GL LR CN NC G
Sbjct: 92 CREPGHMASNCPNEGI-CHSCNKTGHRARDCPTPGLPSGDLRLCN-------NCYKQGHI 143
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNC 176
+C T +NC G R+C + CN G R C + G RN
Sbjct: 144 AADC-TNDKACKNCRKTGHIARDCQNEPV-CNLCNIAGHVARQCPKAEIFGERGGGGRNT 201
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
+ R+CN G R+C + NC G C +G R
Sbjct: 202 GFRDVICRSCNQVGHMSRDCMVSLVICNNCGGRGHMAFECPSGRFMDR 249
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 76/213 (35%), Gaps = 21/213 (9%)
Query: 45 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 104
NC G R C + NCN G C T L NC G NC G+
Sbjct: 53 NCKRPGHFARECPNVAI-CNNCNLPGHIASECTTQSLCW-NCREPGHMASNCPNEGI-CH 109
Query: 105 NCNTGGLGLRNCNTGGL---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+CN G R+C T GL LR CN NC G +C T +NC G
Sbjct: 110 SCNKTGHRARDCPTPGLPSGDLRLCN-------NCYKQGHIAADC-TNDKACKNCRKTGH 161
Query: 162 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------GLRNCNTGGLGLRNCNTGGLGLRN 215
R+C + CN G R C + G RN + R+CN G R+
Sbjct: 162 IARDCQNEPV-CNLCNIAGHVARQCPKAEIFGERGGGGRNTGFRDVICRSCNQVGHMSRD 220
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSKR 248
C + NC G C +G + +R
Sbjct: 221 CMVSLVICNNCGGRGHMAFECPSGRFMDRMPRR 253
>gi|108709691|gb|ABF97486.1| expressed protein [Oryza sativa Japonica Group]
Length = 362
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 82/234 (35%), Gaps = 14/234 (5%)
Query: 7 PISTKGLRNCNTGGLGLRNCNT----GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
PI K RN LR G ++C G NC G + C +G
Sbjct: 138 PIKRKTWRNWKKRIKKLRGWEWRKERKKRGTKDCGRKNHGTTNC-----GAKQCGKKRIG 192
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
NC L + T G + C +G NC G +C +G NC G
Sbjct: 193 TINCGVNQLRRKTIGTINCGAKQCGKESIGTINC-----GANHCRRKSIGTVNCGANHCG 247
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
++ T G +C +G NC G ++ T G +C +G NC
Sbjct: 248 RKSIGTVNCGADHCRRKSIGTVNCGADHCGRKSIGTVNCGANHCGRKSIGTVNCGADHCR 307
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
++ T G +C +G NC G ++ T G+++C + NC
Sbjct: 308 RKSIGTVNCGADHCGRKSIGTVNCGANHCGRKSIGTINCGVKDCQRKNIATTNC 361
>gi|433633365|ref|YP_007266992.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
gi|432164958|emb|CCK62425.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
Length = 1062
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 98/257 (38%), Gaps = 28/257 (10%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
IS G+ N G +G N +G G N G +G N +G GL N G G N
Sbjct: 200 ISNTGMTNVGIGNIGNSNLGSGNTGSFNLGNGNIGNANVGSGNTGLFNLGNGNRGDTNVG 259
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
+G +G N +G G N +G L G RN G G N +G LG N G G N
Sbjct: 260 SGNIGFLNLGSGNNGTGNFGSGNLFGDRNVGVGNRGSFNLGSGNLGSFNVGAGNRGSSNV 319
Query: 127 NTGGLGLRNCNTGGLGLRNCNTG-------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 179
G LG N G LG N G G GL N G+G N TG +G N
Sbjct: 320 GFGNLGTLNLGLGNLGDNNLGFGNSGNNNIGFGLTGDNMIGIGGLNSGTGNVGFGNSGDN 379
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG----------------- 219
+G N + +G N G N NTG + NTG
Sbjct: 380 NIGFFNSGSDNIGFFNSGDRNFGFANAGDTNTGFANAGDTNTGFGNAGHSNFGFGNAGFR 439
Query: 220 GLGLRNCNTGGLGLRNC 236
+GL N +G +G N
Sbjct: 440 NMGLGNAGSGNMGFGNT 456
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 98/264 (37%), Gaps = 15/264 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
+G N +G +G N +G G N +G L G RN G G N +G LG N G
Sbjct: 253 RGDTNVGSGNIGFLNLGSGNNGTGNFGSGNLFGDRNVGVGNRGSFNLGSGNLGSFNVGAG 312
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG-------GLGLRNCNTGGLGLRNCNTGGLG 122
G N G LG N G LG N G G GL N G+G N TG +G
Sbjct: 313 NRGSSNVGFGNLGTLNLGLGNLGDNNLGFGNSGNNNIGFGLTGDNMIGIGGLNSGTGNVG 372
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
N +G N + +G N G N G N G N G
Sbjct: 373 FGNSGDNNIGFFNSGSDNIGFFNSGDRNFGFANAGDTNTGFANAGDTNTGFGNAGHSNFG 432
Query: 183 LRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N +GL N +G +G N NTG + NTG + NTG NTG
Sbjct: 433 FGNAGFRNMGLGNAGSGNMGFGNTGDVNTGWGNAGSFNTGFDNAGDTNTGWGNSGETNTG 492
Query: 240 GLIVPKSKRGAQENASRSENEPCL 263
G+ G S+++P +
Sbjct: 493 GVNSGDLNTG----IGSSDSQPVM 512
>gi|157113261|ref|XP_001651968.1| hypothetical protein AaeL_AAEL006374 [Aedes aegypti]
gi|108877835|gb|EAT42060.1| AAEL006374-PA [Aedes aegypti]
Length = 368
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 67/199 (33%), Gaps = 20/199 (10%)
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
N L L + ++ + L + N G LR L LR+ N L+
Sbjct: 172 ANMEDLPLTRRDVISALIKTSHMTELRFQGVNLAGADLRK-----LDLRHINFKYACLQR 226
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLG-----LRN 165
CN L C L N G L + N G L+ CN L
Sbjct: 227 CNLSLANLNYCCLERADLSFANLEGAQLLSVKGLCANMEGANLQGCNFEDPSGVRSNLEG 286
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
N G L N N G+ LR N L+NCN LR G L CN G L+
Sbjct: 287 VNLKGACLENSNMAGVNLRVANLRNANLKNCN-----LRAAVLAGADLERCNLSGSDLQE 341
Query: 226 CNTGGLGLRNCNTGGLIVP 244
N G ++ ++ P
Sbjct: 342 ANLRGANFKDAQLELMLTP 360
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 63/179 (35%), Gaps = 15/179 (8%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I A I T + G+ L + L LR+ N L+ CN L C L
Sbjct: 185 ISALIKTSHMTELRFQGVNLAGADLRKLDLRHINFKYACLQRCNLSLANLNYCCLERADL 244
Query: 64 RNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
N G L + N G L+ CN N G+ L+ G L N N
Sbjct: 245 SFANLEGAQLLSVKGLCANMEGANLQGCNFEDPSGVRSNLEGVNLK-----GACLENSNM 299
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
G+ LR N L+NCN LR G L CN G L+ N G ++
Sbjct: 300 AGVNLRVANLRNANLKNCN-----LRAAVLAGADLERCNLSGSDLQEANLRGANFKDAQ 353
>gi|183980947|ref|YP_001849238.1| PPE family protein [Mycobacterium marinum M]
gi|183174273|gb|ACC39383.1| PPE family protein [Mycobacterium marinum M]
Length = 733
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 101/250 (40%), Gaps = 28/250 (11%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + LG N G +GL N G G+GL + G G N +G GL N
Sbjct: 350 GFGNSGSFNLGFGNTGDGNIGLANTGNGNIGIGLTGADQIGFGGWNSGSGNSGLFNSGND 409
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGG--LGLRNCNTGGLGLRNCNTG 119
G N + G+ N + G+ N NTGG GL N T G N
Sbjct: 410 NSGFFNSGSHNWGVANTGSTNWGMVNSGSVNTGIGNTGGTNTGLWNAGTANTGSLNAGMN 469
Query: 120 GLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGL 171
+GL N LG N ++ +G+ N +G+ N +G LGL N NTG
Sbjct: 470 NVGLGNSGVADLGAFNSGGNTKHSHDIGIFNAGQHNVGMFNAGSGNLGLSNAGIDNTGAF 529
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT--G 229
N+GG G+ G G + NTG NTG N NTG N NT G
Sbjct: 530 -----NSGGNGVSPIFPGAPG-QAGNTGFFNSGFTNTGLFNSGNTNTGLWNAGNVNTGFG 583
Query: 230 GLGLRNCNTG 239
G+G + N+G
Sbjct: 584 GIGTYSGNSG 593
>gi|194743646|ref|XP_001954311.1| GF18213 [Drosophila ananassae]
gi|190627348|gb|EDV42872.1| GF18213 [Drosophila ananassae]
Length = 331
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 60/177 (33%), Gaps = 25/177 (14%)
Query: 1 MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 58
M I A I T + G+ L + L RN N + +CN L C
Sbjct: 145 MDVIKAIIQTSVITELRFQGVNLSGADLRKLDFRNINFKYANMSHCNLSHTNLNYCCLER 204
Query: 59 GGLGLRN-------------CNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGG 100
L N N G LR CN G+R N G L + N G
Sbjct: 205 ADLQYANLECAQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAG 264
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
+ LR N ++NCN LR G L CN G L+ N G L++
Sbjct: 265 VNLRVANLKNANMKNCN-----LRAAVLAGADLERCNLSGSDLQEANLRGANLKDAE 316
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 62/174 (35%), Gaps = 20/174 (11%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
L + N G LR L RN N + +CN L C L+ N
Sbjct: 160 LRFQGVNLSGADLRK-----LDFRNINFKYANMSHCNLSHTNLNYCCLERADLQYANLEC 214
Query: 141 LGLRNC-----NTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNTGG 190
L + N G LR CN G+R N G L + N G+ LR N
Sbjct: 215 AQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNLRVANLKN 274
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
++NCN LR G L CN G L+ N G L++ ++ P
Sbjct: 275 ANMKNCN-----LRAAVLAGADLERCNLSGSDLQEANLRGANLKDAELTLMVTP 323
>gi|156343702|ref|XP_001621085.1| hypothetical protein NEMVEDRAFT_v1g146088 [Nematostella vectensis]
gi|156206702|gb|EDO28985.1| predicted protein [Nematostella vectensis]
Length = 319
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 95/242 (39%), Gaps = 19/242 (7%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
NTG G NTG G NTG G NTG G NTG G NTG G
Sbjct: 4 NTGYPGQGPGNTGHPGQGPGNTGYPGQDPGNTGYPGQDPGNTGYPGQDPGNTGYPGQGPG 63
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNC---NTGGL 131
NTG G NTG G NTG G NTG G NTG G N NTG
Sbjct: 64 NTGCPGQGPGNTGCPGQGPGNTGYPGQGPGNTGYPGQGPSNTGYPWQGPGNTGPGNTGYP 123
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG-- 189
G NTG G NTG G NTG G NTG G NTG G + NTG
Sbjct: 124 GQGPGNTGHPGQGPGNTGYPGQDPGNTGYPGQDPGNTGCPGQGPGNTGCPGQGSGNTGCP 183
Query: 190 GLGLRNC------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 237
G G N NTG G NTG G NTG G NTG G N
Sbjct: 184 GQGSGNTGCPGQGPGQGPGNTGYPGQGPGNTGHPGQGPGNTGYPGQDPGNTGYPGQDPGN 243
Query: 238 TG 239
TG
Sbjct: 244 TG 245
>gi|17862036|gb|AAL39495.1| LD05823p [Drosophila melanogaster]
gi|220942736|gb|ACL83911.1| CG14647-PB [synthetic construct]
Length = 361
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 62/174 (35%), Gaps = 20/174 (11%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
L + N G LR L RN N + +CN L C L+ N
Sbjct: 190 LRFQGVNLSGADLRK-----LDFRNINFKYANMSHCNLSHTNLNYCCLERADLQYANLEC 244
Query: 141 LGLRNC-----NTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNTGG 190
L + N G LR CN G+R N G L + N G+ LR N
Sbjct: 245 AQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNLRVANLKN 304
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
++NCN LR G L CN G L+ N G L++ ++ P
Sbjct: 305 ANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAELTLMVTP 353
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 59/174 (33%), Gaps = 25/174 (14%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGL 61
I A I T + G+ L + L RN N + +CN L C L
Sbjct: 178 IKAIIQTSVITELRFQGVNLSGADLRKLDFRNINFKYANMSHCNLSHTNLNYCCLERADL 237
Query: 62 GLRN-------------CNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGL 103
N N G LR CN G+R N G L + N G+ L
Sbjct: 238 QYANLECAQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNL 297
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
R N ++NCN LR G L CN G L+ N G L++
Sbjct: 298 RVANLKNANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAE 346
>gi|66362534|ref|XP_628233.1| protein with DEXDc plus ring plus HELICc; possible SNF2 domain
[Cryptosporidium parvum Iowa II]
gi|46229715|gb|EAK90533.1| protein with DEXDc plus ring plus HELICc; possible SNF2 domain
[Cryptosporidium parvum Iowa II]
Length = 2042
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 33/105 (31%)
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
T G N NT N NT N NT N NT N NT N N
Sbjct: 251 TANFGTANSNTANFNTANSNTANFNTANSNTANFNTTNSNTANSNTANSNTANFNTANSN 310
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
T N NT N NT N NT N NT I
Sbjct: 311 TANSNTANSNTSNSNTANSNTSNSNTANSNTANSNTSNSNTANSI 355
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 32/102 (31%)
Query: 28 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 87
T G N NT N NT N NT N NT N NT N N
Sbjct: 251 TANFGTANSNTANFNTANSNTANFNTANSNTANFNTTNSNTANSNTANSNTANFNTANSN 310
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
T N NT N NT N NT N NT
Sbjct: 311 TANSNTANSNTSNSNTANSNTSNSNTANSNTANSNTSNSNTA 352
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 32/102 (31%)
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 117
T G N NT N NT N NT N NT N NT N N
Sbjct: 251 TANFGTANSNTANFNTANSNTANFNTANSNTANFNTTNSNTANSNTANSNTANFNTANSN 310
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 159
T N NT N NT N NT N NT
Sbjct: 311 TANSNTANSNTSNSNTANSNTSNSNTANSNTANSNTSNSNTA 352
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 32/102 (31%)
Query: 88 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 147
T G N NT N NT N NT N NT N NT N N
Sbjct: 251 TANFGTANSNTANFNTANSNTANFNTANSNTANFNTTNSNTANSNTANSNTANFNTANSN 310
Query: 148 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
T N NT N NT N NT N NT
Sbjct: 311 TANSNTANSNTSNSNTANSNTSNSNTANSNTANSNTSNSNTA 352
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 32/102 (31%)
Query: 118 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
T G N NT N NT N NT N NT N NT N N
Sbjct: 251 TANFGTANSNTANFNTANSNTANFNTANSNTANFNTTNSNTANSNTANSNTANFNTANSN 310
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
T N NT N NT N NT N NT
Sbjct: 311 TANSNTANSNTSNSNTANSNTSNSNTANSNTANSNTSNSNTA 352
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 32/102 (31%)
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
T G N NT N NT N NT N NT N NT N N
Sbjct: 251 TANFGTANSNTANFNTANSNTANFNTANSNTANFNTTNSNTANSNTANSNTANFNTANSN 310
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
T N NT N NT N NT N NT
Sbjct: 311 TANSNTANSNTSNSNTANSNTSNSNTANSNTANSNTSNSNTA 352
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 35/112 (31%), Gaps = 10/112 (8%)
Query: 38 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 97
T G N NT N NT N NT N NT N NT N N
Sbjct: 251 TANFGTANSNTANFNTANSNTANFNTANSNTANFNTTNSNTANSNTANSNTANFNTANSN 310
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 149
T N NT N NT N NT N NT N NT
Sbjct: 311 TA-----NSNTANSNTSNSNTANSNTSNSNTA-----NSNTANSNTSNSNTA 352
>gi|306790595|ref|ZP_07428917.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu004]
gi|308332994|gb|EFP21845.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length = 364
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 129
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 364
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 29 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 86
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 139
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 364
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 39 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 96
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 97 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 149
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 364
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 159
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 364
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 364
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 199
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 364
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 99 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 156
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 157 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 209
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 364
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 166
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 167 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 219
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 364
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 229
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 364
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 186
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 187 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 239
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 364
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 252 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 311
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 119
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 312 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 364
>gi|433631471|ref|YP_007265099.1| Conserved protein of unknown function, PPE family protein (PPE40)
[Mycobacterium canettii CIPT 140070010]
gi|432163064|emb|CCK60459.1| Conserved protein of unknown function, PPE family protein (PPE40)
[Mycobacterium canettii CIPT 140070010]
Length = 622
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 210 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 269
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 270 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 329
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 330 NIGFGNTGSGNFGFGNTGNNNFGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 389
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 390 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 449
Query: 235 NCNT 238
N N+
Sbjct: 450 NINS 453
>gi|195451003|ref|XP_002072726.1| GK13533 [Drosophila willistoni]
gi|194168811|gb|EDW83712.1| GK13533 [Drosophila willistoni]
Length = 324
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 62/174 (35%), Gaps = 20/174 (11%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNT 138
L + N G LR L RN N + CN L C L N
Sbjct: 153 LRFQGVNLSGADLRK-----LDFRNINFKYANMSRCNLSHTNLNYCCLERADLQYANLEC 207
Query: 139 GGL-GLRN--CNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNTGG 190
L +R N G LR CN G+R N G L + N G+ LR N
Sbjct: 208 AQLVSIRALCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNLRVANLKN 267
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
++NCN LR+ G L CN G L+ N G L++ ++ P
Sbjct: 268 ANMKNCN-----LRSAVLAGADLERCNLSGSDLQEANLRGANLKDAELTLMVTP 316
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 59/174 (33%), Gaps = 25/174 (14%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGL 61
I A I T L G+ L + L RN N + CN L C L
Sbjct: 141 IKAIIQTSVLTELRFQGVNLSGADLRKLDFRNINFKYANMSRCNLSHTNLNYCCLERADL 200
Query: 62 GLRN-------------CNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGL 103
N N G LR CN G+R N G L + N G+ L
Sbjct: 201 QYANLECAQLVSIRALCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNL 260
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
R N ++NCN LR+ G L CN G L+ N G L++
Sbjct: 261 RVANLKNANMKNCN-----LRSAVLAGADLERCNLSGSDLQEANLRGANLKDAE 309
>gi|195568183|ref|XP_002102097.1| GD19728 [Drosophila simulans]
gi|194198024|gb|EDX11600.1| GD19728 [Drosophila simulans]
Length = 335
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 62/174 (35%), Gaps = 20/174 (11%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
L + N G LR L RN N + +CN L C L+ N
Sbjct: 164 LRFQGVNLSGADLRK-----LDFRNINFKYANMSHCNLSHTNLNYCCLERADLQYANLEC 218
Query: 141 LGLRNC-----NTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNTGG 190
L + N G LR CN G+R N G L + N G+ LR N
Sbjct: 219 AQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNLRVANLKN 278
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
++NCN LR G L CN G L+ N G L++ ++ P
Sbjct: 279 ANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAELTLMVTP 327
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 59/174 (33%), Gaps = 25/174 (14%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGL 61
I A I T + G+ L + L RN N + +CN L C L
Sbjct: 152 IKAIIQTSVITELRFQGVNLSGADLRKLDFRNINFKYANMSHCNLSHTNLNYCCLERADL 211
Query: 62 GLRN-------------CNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGL 103
N N G LR CN G+R N G L + N G+ L
Sbjct: 212 QYANLECAQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNL 271
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
R N ++NCN LR G L CN G L+ N G L++
Sbjct: 272 RVANLKNANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAE 320
>gi|428207598|ref|YP_007091951.1| pentapeptide repeat-containing protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428009519|gb|AFY88082.1| pentapeptide repeat protein [Chroococcidiopsis thermalis PCC 7203]
Length = 242
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 78/224 (34%), Gaps = 8/224 (3%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNT-GGLGLRNCNTGGLGLRNCNTGG 60
PPI AP + +R+ + ++ N+ L + N G L N G LR G
Sbjct: 15 PPI-APYNP-SIRSSDRSVQLVKQQNSAIEQLLSTNECEGCNLENAELQGANLRGAKLRG 72
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
+RN + L N + L N N LR LR+ + L N N
Sbjct: 73 ANMRNADLSYANLENADLENTNLENANLASSNLRGAKLENSYLRSVDLDNANLNNANLEK 132
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+ L N N G LR LR G+ R+ + L N N +
Sbjct: 133 VNLENANLEGSSLRGAKLDTAYLR-----GVNFRDADLQLAILENANLQDANFQRAILRD 187
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 224
L + G LRN + L++ N G L N G L+
Sbjct: 188 AVLDDAYLGNTNLRNADLRNASLQDANLQGAKLVGTNLRGADLK 231
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 66/193 (34%), Gaps = 10/193 (5%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 112
L N G LR G +RN + L N + L N N LR
Sbjct: 55 LENAELQGANLRGAKLRGANMRNADLSYANLENADLENTNLENANLASSNLRGAKLENSY 114
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 172
LR+ + L N N + L N N G LR LR G+ R+ +
Sbjct: 115 LRSVDLDNANLNNANLEKVNLENANLEGSSLRGAKLDTAYLR-----GVNFRDADLQLAI 169
Query: 173 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
L N N L++ N LR+ L N N LRN + L+ G
Sbjct: 170 LENAN-----LQDANFQRAILRDAVLDDAYLGNTNLRNADLRNASLQDANLQGAKLVGTN 224
Query: 233 LRNCNTGGLIVPK 245
LR + G+ +P
Sbjct: 225 LRGADLKGVYLPD 237
>gi|31793532|ref|NP_856025.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31619125|emb|CAD97237.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length = 457
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 208 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 267
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 268 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 327
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 328 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 387
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 388 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 447
Query: 235 NCNT 238
N N+
Sbjct: 448 NINS 451
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 98/238 (41%), Gaps = 20/238 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G G N +G +G N G +G N +G G N G +G N +G G +
Sbjct: 218 NLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNLNLGSGNFGSQ 277
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG--LGLRNCNTG 119
N +G +G N +G +G N +G +G + NTG +G N +G
Sbjct: 278 NLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSG 337
Query: 120 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
G N N G+GL G+G N +G +G N TG +GL N TG +G N
Sbjct: 338 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSG 397
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLG 232
T G N G N + GL N NTG N N G L N N+ +G
Sbjct: 398 TANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAGNINSSFVG 455
>gi|195497067|ref|XP_002095944.1| GE25415 [Drosophila yakuba]
gi|194182045|gb|EDW95656.1| GE25415 [Drosophila yakuba]
Length = 335
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 62/174 (35%), Gaps = 20/174 (11%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
L + N G LR L RN N + +CN L C L+ N
Sbjct: 164 LRFQGVNLSGADLRK-----LDFRNINFKYANMSHCNLSHTNLNYCCLERADLQYANLEC 218
Query: 141 LGLRNC-----NTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNTGG 190
L + N G LR CN G+R N G L + N G+ LR N
Sbjct: 219 AQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNLRVANLKN 278
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
++NCN LR G L CN G L+ N G L++ ++ P
Sbjct: 279 ANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAELTLMVTP 327
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 59/174 (33%), Gaps = 25/174 (14%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGL 61
I A I T + G+ L + L RN N + +CN L C L
Sbjct: 152 IKAIIQTSVITELRFQGVNLSGADLRKLDFRNINFKYANMSHCNLSHTNLNYCCLERADL 211
Query: 62 GLRN-------------CNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGL 103
N N G LR CN G+R N G L + N G+ L
Sbjct: 212 QYANLECAQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNL 271
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
R N ++NCN LR G L CN G L+ N G L++
Sbjct: 272 RVANLKNANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAE 320
>gi|195390927|ref|XP_002054118.1| GJ22966 [Drosophila virilis]
gi|194152204|gb|EDW67638.1| GJ22966 [Drosophila virilis]
Length = 187
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 58/172 (33%), Gaps = 15/172 (8%)
Query: 1 MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
M I A I T + G+ L + L RN N + CN L C
Sbjct: 1 MDVIKAIIQTSAITELRFQGVNLAGADLRKLDFRNINFKYANMSRCNLSHTNLNYCCLER 60
Query: 61 LGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGG-----LGLRNCNTGGLGLRNCNTGG 110
L+ N L + N G LR CN L N G L + N G
Sbjct: 61 ADLQYANLECAQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAG 120
Query: 111 LGLRNCNTGGLGLRNCNT-----GGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
+ LR N ++NCN G L CN G L+ N G L++
Sbjct: 121 VNLRVANLKNANMKNCNLRAAVLAGADLERCNLSGSDLQEANLRGANLKDAE 172
>gi|427419363|ref|ZP_18909546.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 7375]
gi|425762076|gb|EKV02929.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 7375]
Length = 537
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 35/90 (38%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
S + L N + L + G LR+CN G L N N LR CN L N
Sbjct: 413 FSLQPLARLNLQRMILSGASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAY 472
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 97
G + L N + G L N G L+ N
Sbjct: 473 MGEVNLENSDLRGANLSRSNLAGANLKGVN 502
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 41/106 (38%), Gaps = 2/106 (1%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
P V ++G R+ + L N + L + G LR+CN G L N N
Sbjct: 399 PEAVQRAYSRGHRDFSLQPLA--RLNLQRMILSGASFAGAQLRDCNLQGADLTNTNLSKA 456
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 107
LR CN L N G + L N + G L N G L+ N
Sbjct: 457 DLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSRSNLAGANLKGVN 502
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 39/105 (37%), Gaps = 1/105 (0%)
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
+ G LR+CN G L N N LR CN L N G + L N + G L
Sbjct: 431 ASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSR 490
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT-GGLIVPKSKRG 249
N G L+ N G L N L T I P +RG
Sbjct: 491 SNLAGANLKGVNLCGADLTGANLTESQLAAAKTNWSTIYPNGRRG 535
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 29/72 (40%)
Query: 46 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 105
+ G LR+CN G L N N LR CN L N G + L N + G L
Sbjct: 431 ASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSR 490
Query: 106 CNTGGLGLRNCN 117
N G L+ N
Sbjct: 491 SNLAGANLKGVN 502
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 29/72 (40%)
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
+ G LR+CN G L N N LR CN L N G + L N + G L
Sbjct: 431 ASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSR 490
Query: 116 CNTGGLGLRNCN 127
N G L+ N
Sbjct: 491 SNLAGANLKGVN 502
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 29/72 (40%)
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
+ G LR+CN G L N N LR CN L N G + L N + G L
Sbjct: 431 ASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSR 490
Query: 126 CNTGGLGLRNCN 137
N G L+ N
Sbjct: 491 SNLAGANLKGVN 502
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 29/72 (40%)
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
+ G LR+CN G L N N LR CN L N G + L N + G L
Sbjct: 431 ASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSR 490
Query: 136 CNTGGLGLRNCN 147
N G L+ N
Sbjct: 491 SNLAGANLKGVN 502
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 29/72 (40%)
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
+ G LR+CN G L N N LR CN L N G + L N + G L
Sbjct: 431 ASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSR 490
Query: 146 CNTGGLGLRNCN 157
N G L+ N
Sbjct: 491 SNLAGANLKGVN 502
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 29/72 (40%)
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
+ G LR+CN G L N N LR CN L N G + L N + G L
Sbjct: 431 ASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSR 490
Query: 156 CNTGGLGLRNCN 167
N G L+ N
Sbjct: 491 SNLAGANLKGVN 502
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 29/72 (40%)
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
+ G LR+CN G L N N LR CN L N G + L N + G L
Sbjct: 431 ASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSR 490
Query: 166 CNTGGLGLRNCN 177
N G L+ N
Sbjct: 491 SNLAGANLKGVN 502
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 29/72 (40%)
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
+ G LR+CN G L N N LR CN L N G + L N + G L
Sbjct: 431 ASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSR 490
Query: 176 CNTGGLGLRNCN 187
N G L+ N
Sbjct: 491 SNLAGANLKGVN 502
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 29/72 (40%)
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
+ G LR+CN G L N N LR CN L N G + L N + G L
Sbjct: 431 ASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSR 490
Query: 186 CNTGGLGLRNCN 197
N G L+ N
Sbjct: 491 SNLAGANLKGVN 502
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 29/72 (40%)
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
+ G LR+CN G L N N LR CN L N G + L N + G L
Sbjct: 431 ASFAGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSR 490
Query: 196 CNTGGLGLRNCN 207
N G L+ N
Sbjct: 491 SNLAGANLKGVN 502
>gi|221377802|ref|NP_649465.6| CG14647 [Drosophila melanogaster]
gi|220902989|gb|AAF52131.5| CG14647 [Drosophila melanogaster]
Length = 335
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 62/174 (35%), Gaps = 20/174 (11%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
L + N G LR L RN N + +CN L C L+ N
Sbjct: 164 LRFQGVNLSGADLRK-----LDFRNINFKYANMSHCNLSHTNLNYCCLERADLQYANLEC 218
Query: 141 LGLRNC-----NTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNTGG 190
L + N G LR CN G+R N G L + N G+ LR N
Sbjct: 219 AQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNLRVANLKN 278
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
++NCN LR G L CN G L+ N G L++ ++ P
Sbjct: 279 ANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAELTLMVTP 327
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 59/174 (33%), Gaps = 25/174 (14%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGL 61
I A I T + G+ L + L RN N + +CN L C L
Sbjct: 152 IKAIIQTSVITELRFQGVNLSGADLRKLDFRNINFKYANMSHCNLSHTNLNYCCLERADL 211
Query: 62 GLRN-------------CNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGL 103
N N G LR CN G+R N G L + N G+ L
Sbjct: 212 QYANLECAQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNL 271
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
R N ++NCN LR G L CN G L+ N G L++
Sbjct: 272 RVANLKNANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAE 320
>gi|195343413|ref|XP_002038292.1| GM10753 [Drosophila sechellia]
gi|194133313|gb|EDW54829.1| GM10753 [Drosophila sechellia]
Length = 335
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 62/174 (35%), Gaps = 20/174 (11%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
L + N G LR L RN N + +CN L C L+ N
Sbjct: 164 LRFQGVNLSGADLRK-----LDFRNINFKYANMSHCNLSHTNLNYCCLERADLQYANLEC 218
Query: 141 LGLRNC-----NTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNTGG 190
L + N G LR CN G+R N G L + N G+ LR N
Sbjct: 219 AQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNLRVANLKN 278
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
++NCN LR G L CN G L+ N G L++ ++ P
Sbjct: 279 ANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAELTLMVTP 327
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 59/174 (33%), Gaps = 25/174 (14%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGL 61
I A I T + G+ L + L RN N + +CN L C L
Sbjct: 152 IKAIIQTSVITELRFQGVNLSGADLRKLDFRNINFKYANMSHCNLSHTNLNYCCLERADL 211
Query: 62 GLRN-------------CNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGL 103
N N G LR CN G+R N G L + N G+ L
Sbjct: 212 QYANLECAQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNL 271
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
R N ++NCN LR G L CN G L+ N G L++
Sbjct: 272 RVANLKNANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAE 320
>gi|194898494|ref|XP_001978819.1| GG12384 [Drosophila erecta]
gi|190650522|gb|EDV47777.1| GG12384 [Drosophila erecta]
Length = 335
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 62/174 (35%), Gaps = 20/174 (11%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
L + N G LR L RN N + +CN L C L+ N
Sbjct: 164 LRFQGVNLSGADLRK-----LDFRNINFKYANMSHCNLSHTNLNYCCLERADLQYANLEC 218
Query: 141 LGLRNC-----NTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNTGG 190
L + N G LR CN G+R N G L + N G+ LR N
Sbjct: 219 AQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNLRVANLKN 278
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
++NCN LR G L CN G L+ N G L++ ++ P
Sbjct: 279 ANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAELTLMVTP 327
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 59/174 (33%), Gaps = 25/174 (14%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGL 61
I A I T + G+ L + L RN N + +CN L C L
Sbjct: 152 IKAIIQTSVITELRFQGVNLSGADLRKLDFRNINFKYANMSHCNLSHTNLNYCCLERADL 211
Query: 62 GLRN-------------CNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGL 103
N N G LR CN G+R N G L + N G+ L
Sbjct: 212 QYANLECAQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNL 271
Query: 104 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
R N ++NCN LR G L CN G L+ N G L++
Sbjct: 272 RVANLKNANMKNCN-----LRAAVLAGADLEKCNLSGSDLQEANLRGANLKDAE 320
>gi|432885057|ref|XP_004074636.1| PREDICTED: BTB/POZ domain-containing protein KCTD9-like [Oryzias
latipes]
Length = 290
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 57/164 (34%), Gaps = 15/164 (9%)
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
N G L + + + N G L + N G L + L + N G+ +
Sbjct: 125 NFSGADLSRLDLRYINFKMANLSGANLSHANLSGANLERADLSAACLDSANLQGVKMLCS 184
Query: 147 NTGGLGLRNCNTGGLG-----LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
N G LR CN L N G+ + G+ LR L+NCN
Sbjct: 185 NAEGASLRGCNFEDPAGVKANLEGANLKGVDMEGSQMTGINLRVATLKNAKLKNCN---- 240
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
LR G L NC+ G L+ N LR N G I +
Sbjct: 241 -LRGATLAGTDLENCDLSGCDLQEAN-----LRGSNVKGAIFEE 278
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 52/149 (34%), Gaps = 10/149 (6%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 76
N G L + + + N G L + N G L + L + N G+ +
Sbjct: 125 NFSGADLSRLDLRYINFKMANLSGANLSHANLSGANLERADLSAACLDSANLQGVKMLCS 184
Query: 77 NTGGLGLRNCNTGGLG-----LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N G LR CN L N G+ + G+ LR L+NCN
Sbjct: 185 NAEGASLRGCNFEDPAGVKANLEGANLKGVDMEGSQMTGINLRVATLKNAKLKNCN---- 240
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG 160
LR G L NC+ G L+ N G
Sbjct: 241 -LRGATLAGTDLENCDLSGCDLQEANLRG 268
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 52/149 (34%), Gaps = 10/149 (6%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 86
N G L + + + N G L + N G L + L + N G+ +
Sbjct: 125 NFSGADLSRLDLRYINFKMANLSGANLSHANLSGANLERADLSAACLDSANLQGVKMLCS 184
Query: 87 NTGGLGLRNCNTGGLG-----LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
N G LR CN L N G+ + G+ LR L+NCN
Sbjct: 185 NAEGASLRGCNFEDPAGVKANLEGANLKGVDMEGSQMTGINLRVATLKNAKLKNCN---- 240
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
LR G L NC+ G L+ N G
Sbjct: 241 -LRGATLAGTDLENCDLSGCDLQEANLRG 268
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 52/149 (34%), Gaps = 10/149 (6%)
Query: 37 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 96
N G L + + + N G L + N G L + L + N G+ +
Sbjct: 125 NFSGADLSRLDLRYINFKMANLSGANLSHANLSGANLERADLSAACLDSANLQGVKMLCS 184
Query: 97 NTGGLGLRNCNTGGLG-----LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
N G LR CN L N G+ + G+ LR L+NCN
Sbjct: 185 NAEGASLRGCNFEDPAGVKANLEGANLKGVDMEGSQMTGINLRVATLKNAKLKNCN---- 240
Query: 152 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
LR G L NC+ G L+ N G
Sbjct: 241 -LRGATLAGTDLENCDLSGCDLQEANLRG 268
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 52/149 (34%), Gaps = 10/149 (6%)
Query: 47 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 106
N G L + + + N G L + N G L + L + N G+ +
Sbjct: 125 NFSGADLSRLDLRYINFKMANLSGANLSHANLSGANLERADLSAACLDSANLQGVKMLCS 184
Query: 107 NTGGLGLRNCNTGGLG-----LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
N G LR CN L N G+ + G+ LR L+NCN
Sbjct: 185 NAEGASLRGCNFEDPAGVKANLEGANLKGVDMEGSQMTGINLRVATLKNAKLKNCN---- 240
Query: 162 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
LR G L NC+ G L+ N G
Sbjct: 241 -LRGATLAGTDLENCDLSGCDLQEANLRG 268
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 52/149 (34%), Gaps = 10/149 (6%)
Query: 57 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 116
N G L + + + N G L + N G L + L + N G+ +
Sbjct: 125 NFSGADLSRLDLRYINFKMANLSGANLSHANLSGANLERADLSAACLDSANLQGVKMLCS 184
Query: 117 NTGGLGLRNCNTGGLG-----LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
N G LR CN L N G+ + G+ LR L+NCN
Sbjct: 185 NAEGASLRGCNFEDPAGVKANLEGANLKGVDMEGSQMTGINLRVATLKNAKLKNCN---- 240
Query: 172 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
LR G L NC+ G L+ N G
Sbjct: 241 -LRGATLAGTDLENCDLSGCDLQEANLRG 268
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 52/149 (34%), Gaps = 10/149 (6%)
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
N G L + + + N G L + N G L + L + N G+ +
Sbjct: 125 NFSGADLSRLDLRYINFKMANLSGANLSHANLSGANLERADLSAACLDSANLQGVKMLCS 184
Query: 127 NTGGLGLRNCNTGGLG-----LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
N G LR CN L N G+ + G+ LR L+NCN
Sbjct: 185 NAEGASLRGCNFEDPAGVKANLEGANLKGVDMEGSQMTGINLRVATLKNAKLKNCN---- 240
Query: 182 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG 210
LR G L NC+ G L+ N G
Sbjct: 241 -LRGATLAGTDLENCDLSGCDLQEANLRG 268
>gi|72388488|ref|XP_844668.1| nucleoporin (NUP54/57) [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360145|gb|AAX80565.1| nucleoporin (NUP54/57), putative [Trypanosoma brucei]
gi|70801201|gb|AAZ11109.1| nucleoporin (NUP54/57), putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 641
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 81/240 (33%), Gaps = 38/240 (15%)
Query: 11 KGLRNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLG 62
G TGG G TGG G TGG G TGG G TGG G
Sbjct: 77 AGANTATTGGFGAGANTVTTGGFGAGANTATTGGFGAGANTATTGGFGAGANTATTGGFG 136
Query: 63 L--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLG 112
TGG G TGG G TGG G TGG G TGG G
Sbjct: 137 AGANTATTGGFGAGANTATTGGFGAGANTATTGGFGAGANTVTTGGFGAGANTATTGGFG 196
Query: 113 L--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLG 162
TGG G TGG G TGG G TGG G TGG G
Sbjct: 197 AGANTATTGGFGAGANTVTTGGFGAGANTATTGGFGAGANTVTTGGFGAGANTATTGGFG 256
Query: 163 L--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLGL--RNCNTGGLG 212
TGG G TGG G TGG G TGG G TGG G
Sbjct: 257 AGANTATTGGFGAGANTATTGGFGAGANTATTGGFGAGANTVTTGGFGAGANTATTGGFG 316
>gi|31793533|ref|NP_856026.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31619126|emb|CAD97238.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length = 614
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 206 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 265
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 266 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 325
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 326 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 385
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 386 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 444
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 216 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 275
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 276 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 335
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 336 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 395
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 396 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 450
>gi|15841868|ref|NP_336905.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|57116976|ref|YP_177872.1| PPE family protein PPE40 [Mycobacterium tuberculosis H37Rv]
gi|148662188|ref|YP_001283711.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148823559|ref|YP_001288313.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|167968765|ref|ZP_02551042.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|254551403|ref|ZP_05141850.1| PPE family protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289443877|ref|ZP_06433621.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289570498|ref|ZP_06450725.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289575050|ref|ZP_06455277.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289754461|ref|ZP_06513839.1| predicted protein [Mycobacterium tuberculosis EAS054]
gi|289758480|ref|ZP_06517858.1| predicted protein [Mycobacterium tuberculosis T85]
gi|294994540|ref|ZP_06800231.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|297634958|ref|ZP_06952738.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|339632382|ref|YP_004724024.1| PPE family protein [Mycobacterium africanum GM041182]
gi|340627367|ref|YP_004745819.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|375295829|ref|YP_005100096.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|386005275|ref|YP_005923554.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
gi|392432036|ref|YP_006473080.1| hypothetical protein TBXG_001604 [Mycobacterium tuberculosis KZN
605]
gi|397674255|ref|YP_006515790.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|424804696|ref|ZP_18230127.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|81706980|sp|Q7D7A1.1|PPE40_MYCTU RecName: Full=Uncharacterized PPE family protein PPE40
gi|13882134|gb|AAK46719.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|148506340|gb|ABQ74149.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148722086|gb|ABR06711.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|289416796|gb|EFD14036.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289539481|gb|EFD44059.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289544252|gb|EFD47900.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289695048|gb|EFD62477.1| predicted protein [Mycobacterium tuberculosis EAS054]
gi|289714044|gb|EFD78056.1| predicted protein [Mycobacterium tuberculosis T85]
gi|326903972|gb|EGE50905.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|328458334|gb|AEB03757.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|339331738|emb|CCC27440.1| PPE family protein [Mycobacterium africanum GM041182]
gi|340005557|emb|CCC44719.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|379028645|dbj|BAL66378.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
gi|380725763|gb|AFE13558.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
gi|392053445|gb|AFM49003.1| hypothetical protein TBXG_001604 [Mycobacterium tuberculosis KZN
605]
gi|395139160|gb|AFN50319.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|440581832|emb|CCG12235.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
gi|444895884|emb|CCP45144.1| PPE family protein PPE40 [Mycobacterium tuberculosis H37Rv]
Length = 615
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 207 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 266
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 267 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 326
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 327 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 386
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 387 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 445
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 217 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 276
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 277 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 336
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 337 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 396
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 397 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 451
>gi|289447995|ref|ZP_06437739.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|297731948|ref|ZP_06961066.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|289420953|gb|EFD18154.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 621
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 209 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 268
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 269 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 328
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 329 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 388
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 389 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 448
Query: 235 NCNT 238
N N+
Sbjct: 449 NINS 452
>gi|289447996|ref|ZP_06437740.1| predicted protein [Mycobacterium tuberculosis CPHL_A]
gi|289420954|gb|EFD18155.1| predicted protein [Mycobacterium tuberculosis CPHL_A]
Length = 616
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 208 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 267
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 268 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 327
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 328 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 387
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 388 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 446
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 218 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 277
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 278 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 337
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 338 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 397
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 398 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 452
>gi|183981425|ref|YP_001849716.1| PPE family protein [Mycobacterium marinum M]
gi|183174751|gb|ACC39861.1| PPE family protein [Mycobacterium marinum M]
Length = 632
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 82/215 (38%), Gaps = 20/215 (9%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLR 64
P+S N LG N + +GL N +GL N G N N G GL
Sbjct: 295 PVSFSTGNNIGDANLGAFNLGSANIGLSN-----IGLANIGNNNFGFGNVGNNNIGFGLT 349
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
N G+G N TG G N +G N +G +G+ N G G N+GG+
Sbjct: 350 GDNQVGIGSLNAGTGNFGFGNSGDNNIGFFNSGSGNVGVFNSGDGNTGF--GNSGGVNSG 407
Query: 125 NCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------ 176
N+GGL G N LG N + +G N +G N G N
Sbjct: 408 FWNSGGLNTGFGNAGANNLGFSNAGSSNVGDSNAGGSNMGSGNAGYSNTGFFNSGGSATF 467
Query: 177 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 208
NTG + NTGG + NTG L + NT
Sbjct: 468 IGGNTGFFNSGDLNTGGGNAGSVNTGFLNSGDFNT 502
>gi|385995303|ref|YP_005913601.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339295257|gb|AEJ47368.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 622
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 210 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 269
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 270 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 329
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 330 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 389
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 390 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 449
Query: 235 NCNT 238
N N+
Sbjct: 450 NINS 453
>gi|428316112|ref|YP_007113994.1| pentapeptide repeat protein [Oscillatoria nigro-viridis PCC 7112]
gi|428239792|gb|AFZ05578.1| pentapeptide repeat protein [Oscillatoria nigro-viridis PCC 7112]
Length = 276
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 78/223 (34%), Gaps = 18/223 (8%)
Query: 3 PIVAPIST-KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
I+A I K L N G+ L + G+ L N G L N L+ N G+
Sbjct: 18 EILATIQQGKSLAQSNLAGINLSQMDLFGIDLSGSNLIGANLSQTN-----LQGANLQGV 72
Query: 62 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
LR N LR+ N G L+ L+ CN L+ L L + L
Sbjct: 73 DLRRAN-----LRDANLSGANLQESYLFRADLQGCNLVDAQLQEAK---LKLAQYDARTL 124
Query: 122 ---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G N+G +G N G L G L CN G L + G L
Sbjct: 125 WPEGFNYKNSGAIG-PQANLSGAFLNTAYLRGADLHGCNLRGAYLSGADLTGANLEGAAL 183
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
G L+N G LRN G+ L+ + G L N L
Sbjct: 184 SGASLQNAFLTGAYLRNAILIGVELQGADLRGADLTGANLEQL 226
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 78/228 (34%), Gaps = 17/228 (7%)
Query: 7 PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 66
P+S + G L N G+ L + G+ L N G L N L+
Sbjct: 13 PLSATEILATIQQGKSLAQSNLAGINLSQMDLFGIDLSGSNLIGANLSQTN-----LQGA 67
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 126
N G+ LR N LR+ N G L+ L+ CN L+ L L
Sbjct: 68 NLQGVDLRRAN-----LRDANLSGANLQESYLFRADLQGCNLVDAQLQEAK---LKLAQY 119
Query: 127 NTGGL---GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
+ L G N+G +G N G L G L CN G L + G L
Sbjct: 120 DARTLWPEGFNYKNSGAIG-PQANLSGAFLNTAYLRGADLHGCNLRGAYLSGADLTGANL 178
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
G L+N G LRN G+ L+ + G L N L
Sbjct: 179 EGAALSGASLQNAFLTGAYLRNAILIGVELQGADLRGADLTGANLEQL 226
>gi|118616725|ref|YP_905057.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118568835|gb|ABL03586.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length = 891
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 74/195 (37%), Gaps = 13/195 (6%)
Query: 50 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNC 106
G+G N G LG N T +G N +G N +G G N NTG R+
Sbjct: 289 GIGALNSGAGNLGFGNSGTNNIGFFNSGDNNIGFFNSGSGNFGFENAGDINTGFWNGRDT 348
Query: 107 NT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 164
NT G GL N G G+ N G G N G GL NTG NTG
Sbjct: 349 NTGFGNSGLSNFGFGNSGVNNVGAGNGGSSNVGLGNAGL--LNTGSFNSGKFNTGDFNSG 406
Query: 165 NCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ NTG NT GL N NTG + NTG + + G RN +G
Sbjct: 407 SMNTGYFNSSGHNT---GLGNSGFTNTGFFNSGDLNTGMGSPEDQSVANSGFRNAGSGNS 463
Query: 222 GLRNCNTGGLGLRNC 236
G N + G N
Sbjct: 464 GFNNTGSFSSGFFNS 478
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 91/252 (36%), Gaps = 17/252 (6%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
T GL T GL + LG+ N G LGL N G L + NTG + N G
Sbjct: 572 TDGLAATTTSGLPALDLPAPNLGIGNAGVGNLGLGNI--GDYNLGSGNTGDANFGSGNIG 629
Query: 70 GLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
L L + N G L NTG +GL N +G N GL N GL N
Sbjct: 630 ALNLGSGNHGDANLGFGNTGDNNIGLFNSGDNNVGFFNSGGANFGLANSGDTNTGLWNAG 689
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 184
+ G N + G N +G N +G N NTG NTG
Sbjct: 690 STNTGFGNAGSADFGFGNAGDRNMGFGNAGAANMGAGNSGSYNTGSFNSGTLNTGDFNGG 749
Query: 185 NCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTGGLGLR 234
+ NTG N NTGG+ + NTG G N +G G N G
Sbjct: 750 DHNTGWGNSGNTNTGGINSGDLNTGFGSSADQAVTNSGFGNNGSGNSGFNNTGDTNSGFH 809
Query: 235 NCNTGGLIVPKS 246
N NT L S
Sbjct: 810 NANTSALFSGHS 821
>gi|254551402|ref|ZP_05141849.1| PPE family protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length = 622
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 210 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 269
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 270 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 329
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 330 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 389
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 390 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 449
Query: 235 NCNT 238
N N+
Sbjct: 450 NINS 453
>gi|183984588|ref|YP_001852879.1| PPE family protein [Mycobacterium marinum M]
gi|183177914|gb|ACC43024.1| PPE family protein [Mycobacterium marinum M]
Length = 3006
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 71/178 (39%), Gaps = 10/178 (5%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG-------GLGLRNC 66
N +G +G N G LG N G G N G GL N G G+GL
Sbjct: 246 FNLGSGNIGSYNFGPGNLGSYNIGFGNAGDYNVGFGNSGLGNIGFGNSGSNNLGIGLTGS 305
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 123
G G N +G +GL N G +GL N TG G+ N GL N NTG
Sbjct: 306 GQVGFGGWNSGSGNVGLFNSGVGNVGLFNSGTGNWGVGNSGEFDTGLFNAGRYNTGVFNS 365
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + N+G NTG L + NTG N NTG + NTGG
Sbjct: 366 GVLNTGVGNAGDYNSGSFNTGASNTGDLNAGDTNTGWANTGNLNTGFGNSGHLNTGGF 423
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 71/178 (39%), Gaps = 10/178 (5%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG-------GLGLRNC 66
N +G +G N G LG N G G N G GL N G G+GL
Sbjct: 1190 FNLGSGNIGSYNFGPGNLGSYNIGFGNAGDYNVGFGNSGLGNIGFGNSGSNNLGIGLTGS 1249
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 123
G G N +G +GL N G +GL N TG G+ N GL N NTG
Sbjct: 1250 GQVGFGGWNSGSGNVGLFNSGVGNVGLFNSGTGNWGVGNSGEFDTGLFNAGRYNTGVFNS 1309
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + N+G NTG L + NTG N NTG + NTGG
Sbjct: 1310 GVLNTGVGNAGDYNSGSFNTGASNTGDLNAGDTNTGWANTGNLNTGFGNSGHLNTGGF 1367
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 71/178 (39%), Gaps = 10/178 (5%)
Query: 14 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG-------GLGLRNC 66
N +G +G N G LG N G G N G GL N G G+GL
Sbjct: 2118 FNLGSGNIGSYNFGPGNLGSYNIGFGNAGDYNVGFGNSGLGNIGFGNSGSNNLGIGLTGS 2177
Query: 67 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGL 123
G G N +G +GL N G +GL N TG G+ N GL N NTG
Sbjct: 2178 GQVGFGGWNSGSGNVGLFNSGDGNVGLFNSGTGNWGVGNSGEFDTGLFNAGRYNTGVFNS 2237
Query: 124 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTG + N+G NTG L + NTG N NTG + NTGG
Sbjct: 2238 GVLNTGVGNAGDYNSGSFNTGASNTGDLNAGDTNTGWANTGNLNTGFGNSGHLNTGGF 2295
Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--- 166
G+GL + G G N +G +GL N G +G N +G G+ N + G+ N
Sbjct: 2620 GIGLSGDHQVGFGGWNSGSGNVGLFNSGDGNIGFFNSGSGNFGIANSGSFNTGIANAGLT 2679
Query: 167 NTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
NTG GL N G G N +GG NTG + NTG + NTG
Sbjct: 2680 NTGWFNSGLANTGWGNAGAYN--SGGFNAGAYNTGSFNPGHVNTGWFNTGDINTG 2732
>gi|254415943|ref|ZP_05029700.1| conserved domain protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196177370|gb|EDX72377.1| conserved domain protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 769
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 71/235 (30%), Gaps = 27/235 (11%)
Query: 5 VAPISTKGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 59
++ IS KG NT G+ L N + L N G L N N G L N N
Sbjct: 221 LSQISFKGANFANTSLAGLTGINLSNSDLSHANLNQANLSGANLTNANLEGANLENANLA 280
Query: 60 GLGLR--NCNTGGLG---------LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 108
+ L+ C+ + + + + N L N L + N
Sbjct: 281 KIKLQGAKCDRANFQGVRFYYEHQYKAWDLSQISFKGANFANTSLSKLNFSHSDLSHANF 340
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR------NCNTGGLG 162
L + L+ N G+ L G + R N L
Sbjct: 341 QQAQLTQIDLNYANLKGTNFQGVTLNQVTLKGAIIDEQTQMAASWRKVIAVLNQTHEDLE 400
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
L+N + L N G L + + + L N N G N G+ L N
Sbjct: 401 LQNLDLSRQDLSEFNLAGANLSHADLTSVNLENANLKG-----ANLTGVDLSKAN 450
>gi|433635438|ref|YP_007269065.1| Conserved protein of unknown function, PPE family, PPE 39/40
[Mycobacterium canettii CIPT 140070017]
gi|432167031|emb|CCK64541.1| Conserved protein of unknown function, PPE family, PPE 39/40
[Mycobacterium canettii CIPT 140070017]
Length = 612
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 204 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 263
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 264 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 323
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 324 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 383
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 384 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 442
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 214 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 273
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 274 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 333
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 334 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 393
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 394 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 448
>gi|332704952|ref|ZP_08425038.1| hypothetical protein LYNGBM3L_00660 [Moorea producens 3L]
gi|332356304|gb|EGJ35758.1| hypothetical protein LYNGBM3L_00660 [Moorea producens 3L]
Length = 544
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 79/244 (32%), Gaps = 15/244 (6%)
Query: 4 IVAPIST-----KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 58
+VA I++ + LR N L + G L + + G L + G + N
Sbjct: 219 LVAEIASGGAVGRDLRGANLSDADLSDTKLSGANLCDADLSGADLSGADLSGADFNDANL 278
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGL 113
G L + N L N G L + N G L N N L N G L
Sbjct: 279 SGADLSSANLIRANLIRANLSGANLSDVKVIGGNLGNANLSNANFSSAKLIRANLSGADL 338
Query: 114 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 173
G L N N G L + N L + N G L N G LR G L
Sbjct: 339 -----SGADLSNANFSGASLYSANLSNANLSSANLRGTELSGANLSGADLRGTKLSGANL 393
Query: 174 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 233
N L + N G L N G LR + L N G L + N G L
Sbjct: 394 SGANLSNAKLIDSNLRGTELSGANLSGANLRGASLYSANLSGANLRGASLYSANLSGANL 453
Query: 234 RNCN 237
N
Sbjct: 454 SGAN 457
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 79/239 (33%), Gaps = 23/239 (9%)
Query: 27 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 86
N G L N N L N G L G L N N G L + N L +
Sbjct: 312 NLGNANLSNANFSSAKLIRANLSGADL-----SGADLSNANFSGASLYSANLSNANLSSA 366
Query: 87 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 146
N G L N G LR G L N L + N G L N G LR
Sbjct: 367 NLRGTELSGANLSGADLRGTKLSGANLSGANLSNAKLIDSNLRGTELSGANLSGANLRGA 426
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--------CNTGGLGLRNCNT 198
+ L N G L + N G L N L L N + L N
Sbjct: 427 SLYSANLSGANLRGASLYSANLSGANLSGAN---LSLANLCPMRVSGTDFSAANLSGANL 483
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI-VPKS------KRGA 250
GG L + L + N G L + N G ++N G ++ + +S KRGA
Sbjct: 484 GGAYLYRADLKDTDLSSANLTGADLSSANLNGADVKNARFGYIVGIDESTKLKLIKRGA 542
>gi|383308148|ref|YP_005360959.1| PPE family protein [Mycobacterium tuberculosis RGTB327]
gi|380722101|gb|AFE17210.1| PPE family protein [Mycobacterium tuberculosis RGTB327]
Length = 510
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 189 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 248
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 249 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 308
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 309 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 368
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 369 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 427
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 199 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 258
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 259 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 318
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 319 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 378
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 379 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 433
>gi|433635437|ref|YP_007269064.1| Conserved protein of unknown function, PPE family protein (PPE40)
[Mycobacterium canettii CIPT 140070017]
gi|432167030|emb|CCK64540.1| Conserved protein of unknown function, PPE family protein (PPE40)
[Mycobacterium canettii CIPT 140070017]
Length = 623
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 99/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 211 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 270
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 271 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 330
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 331 NIGFGNTGSGNFGFGNTGNNNFGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 390
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + G N NTG N N G L
Sbjct: 391 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGFANAGAGNTGFFDAGNYNFGSLNAG 450
Query: 235 NCNT 238
N N+
Sbjct: 451 NINS 454
>gi|15841865|ref|NP_336902.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|289754460|ref|ZP_06513838.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|13882131|gb|AAK46716.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|289695047|gb|EFD62476.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length = 621
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 209 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 268
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 269 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 328
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 329 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 388
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 389 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 448
Query: 235 NCNT 238
N N+
Sbjct: 449 NINS 452
>gi|253798567|ref|YP_003031568.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289570496|ref|ZP_06450723.1| predicted protein [Mycobacterium tuberculosis T17]
gi|289575049|ref|ZP_06455276.1| predicted protein [Mycobacterium tuberculosis K85]
gi|294994541|ref|ZP_06800232.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|297634957|ref|ZP_06952737.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|313659283|ref|ZP_07816163.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|375295830|ref|YP_005100097.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|385991683|ref|YP_005909981.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|385999136|ref|YP_005917435.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|392432037|ref|YP_006473081.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253320070|gb|ACT24673.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|289539480|gb|EFD44058.1| predicted protein [Mycobacterium tuberculosis K85]
gi|289544250|gb|EFD47898.1| predicted protein [Mycobacterium tuberculosis T17]
gi|328458335|gb|AEB03758.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|339298876|gb|AEJ50986.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|344220183|gb|AEN00814.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|379028644|dbj|BAL66377.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
gi|392053446|gb|AFM49004.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 622
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 210 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 269
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 270 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 329
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 330 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 389
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 390 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 449
Query: 235 NCNT 238
N N+
Sbjct: 450 NINS 453
>gi|428181173|gb|EKX50038.1| hypothetical protein GUITHDRAFT_135709 [Guillardia theta CCMP2712]
Length = 1263
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 49/247 (19%), Positives = 78/247 (31%), Gaps = 10/247 (4%)
Query: 6 APISTKGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 60
A +S N N + L N L C+ G + + N L G
Sbjct: 383 AQVSDAQFVNANLSNVKLNAARVLRSNFSESNLTACDFSGAVMNDSNFERANLTKARFVG 442
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
+RN + + + + + G L +C+ L L L
Sbjct: 443 CEMRNASFQHATFASATFSDVKMEGVDLTGCDLSSCDLSKLILSGSKLEKSNLHKSKLSK 502
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
+ L NCN L L + ++ L+ + N L++ N G L +CN
Sbjct: 503 VDLSNCN---LTLTDMSSS--DLQKADLSRSLFYRANLSSANLKSSNMNGADLSHCNLSS 557
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L + G L N G +C+ L+NCN G G + G
Sbjct: 558 ACLERASLYGSKLEGANLEGADFSHCDLSFAMLQNCNLRGANFTGAKLTGTDFSGSDLEG 617
Query: 241 LIVPKSK 247
I+P +
Sbjct: 618 AIMPDME 624
>gi|433631472|ref|YP_007265100.1| Conserved protein of unknown function, PPE family, PPE 39/40
[Mycobacterium canettii CIPT 140070010]
gi|432163065|emb|CCK60460.1| Conserved protein of unknown function, PPE family, PPE 39/40
[Mycobacterium canettii CIPT 140070010]
Length = 615
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 207 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 266
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 267 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 326
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 327 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 386
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 387 DGNVGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 445
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 217 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 276
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 277 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 336
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 337 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNVGFFNSG 396
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 397 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 451
>gi|298525838|ref|ZP_07013247.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
gi|298495632|gb|EFI30926.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
Length = 622
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 210 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 269
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 270 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 329
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 330 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 389
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 390 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 449
Query: 235 NCNT 238
N N+
Sbjct: 450 NINS 453
>gi|254365133|ref|ZP_04981179.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|297731949|ref|ZP_06961067.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|134150647|gb|EBA42692.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
Length = 614
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 206 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 265
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 266 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 325
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 326 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 385
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 386 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 444
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 216 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 275
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 276 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 335
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 336 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 395
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 396 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 450
>gi|433627485|ref|YP_007261114.1| Conserved protein of unknown function, PPE family, PPE 39/40
[Mycobacterium canettii CIPT 140060008]
gi|432155091|emb|CCK52333.1| Conserved protein of unknown function, PPE family, PPE 39/40
[Mycobacterium canettii CIPT 140060008]
Length = 622
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 210 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 269
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 270 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 329
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 330 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 389
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 390 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 449
Query: 235 NCNT 238
N N+
Sbjct: 450 NINS 453
>gi|306808672|ref|ZP_07445340.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu007]
gi|308344981|gb|EFP33832.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
Length = 551
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 139 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 198
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 199 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 258
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 259 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 318
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 319 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 378
Query: 235 NCNT 238
N N+
Sbjct: 379 NINS 382
>gi|291529753|emb|CBK95339.1| Pentapeptide repeats (8 copies) [Eubacterium rectale M104/1]
Length = 345
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 72/181 (39%), Gaps = 13/181 (7%)
Query: 1 MPPIVA--PISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 58
+ ++A +ST G ++C T L + LR N G CNTG NT
Sbjct: 65 VAEVIAYGDVSTDGDKSC-TDKLEIVREIPWDEVLRIVNIGKNCTGRCNTGDYNTGYYNT 123
Query: 59 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 118
G NTG NTG NTG R NTG NCNTG N NT
Sbjct: 124 GDYNTGYYNTGDYNTGYYNTGDYNTGYYNTGDCNTRYYNTGDYNTGNCNTGDRNTGNNNT 183
Query: 119 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 178
G + + NTG + + NTG NCNTG NTG NTG + NT
Sbjct: 184 GNCNVGDRNTGSMNTGDWNTG-----NCNTGYYNTGYGNTGDY-----NTGDWNKSSFNT 233
Query: 179 G 179
G
Sbjct: 234 G 234
>gi|148823556|ref|YP_001288310.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|254365130|ref|ZP_04981176.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150644|gb|EBA42689.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|148722083|gb|ABR06708.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 613
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 201 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 260
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 261 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 320
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 321 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 380
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 381 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 440
Query: 235 NCNT 238
N N+
Sbjct: 441 NINS 444
>gi|308375861|ref|ZP_07445342.2| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308377990|ref|ZP_07481164.2| putative PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308344979|gb|EFP33830.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308353909|gb|EFP42760.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009]
Length = 555
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 147 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 206
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 207 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 266
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 267 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 326
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 327 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 385
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 157 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 216
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 217 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 276
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 277 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 336
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 337 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391
>gi|308376988|ref|ZP_07440770.2| putative PPE family protein [Mycobacterium tuberculosis SUMu008]
gi|308349290|gb|EFP38141.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008]
Length = 567
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 159 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 218
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 219 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 278
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 279 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 338
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 339 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 397
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 169 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 228
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 229 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 288
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 289 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 348
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 349 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 403
>gi|254415567|ref|ZP_05029327.1| Pentapeptide repeat protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196177748|gb|EDX72752.1| Pentapeptide repeat protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 1060
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 65/207 (31%), Gaps = 8/207 (3%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
NT L N N L+ N G+ L + G L + G L N G L
Sbjct: 813 INTVSQFLSNVN-----LKQVNLRGINLVYADLSGANLSGADLSGADLSAVNLSGADLSG 867
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N G+ L + L N L++ N L + L + + L N
Sbjct: 868 ANLAGVALFEADLNSANLSRANLCSAILQDANLTSADLNEADLNEADLNEADLSRVNLSN 927
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
+ L N N L + L N N G L + G L N + L N
Sbjct: 928 AHLWKANLWNANLYSANLTSAKLSDAKLGNVNLNGADLSKADLSGAELSNAD---LTSAN 984
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLG 222
++ L N L N N+ L
Sbjct: 985 LSSANLSFAQLNGADLKGANFNSADLS 1011
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 65/207 (31%), Gaps = 8/207 (3%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
NT L N N L+ N G+ L + G L + G L N G L
Sbjct: 813 INTVSQFLSNVN-----LKQVNLRGINLVYADLSGANLSGADLSGADLSAVNLSGADLSG 867
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
N G+ L + L N L++ N L + L + + L N
Sbjct: 868 ANLAGVALFEADLNSANLSRANLCSAILQDANLTSADLNEADLNEADLNEADLSRVNLSN 927
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
+ L N N L + L N N G L + G L N + L N
Sbjct: 928 AHLWKANLWNANLYSANLTSAKLSDAKLGNVNLNGADLSKADLSGAELSNAD---LTSAN 984
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLG 232
++ L N L N N+ L
Sbjct: 985 LSSANLSFAQLNGADLKGANFNSADLS 1011
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 65/206 (31%), Gaps = 8/206 (3%)
Query: 36 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 95
NT L N N L+ N G+ L + G L + G L N G L
Sbjct: 813 INTVSQFLSNVN-----LKQVNLRGINLVYADLSGANLSGADLSGADLSAVNLSGADLSG 867
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
N G+ L + L N L++ N L + L + + L N
Sbjct: 868 ANLAGVALFEADLNSANLSRANLCSAILQDANLTSADLNEADLNEADLNEADLSRVNLSN 927
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 215
+ L N N L + L N N G L + G L N + L N
Sbjct: 928 AHLWKANLWNANLYSANLTSAKLSDAKLGNVNLNGADLSKADLSGAELSNAD---LTSAN 984
Query: 216 CNTGGLGLRNCNTGGLGLRNCNTGGL 241
++ L N L N N+ L
Sbjct: 985 LSSANLSFAQLNGADLKGANFNSADL 1010
>gi|183984190|ref|YP_001852481.1| PPE family protein [Mycobacterium marinum M]
gi|443492320|ref|YP_007370467.1| PPE family protein [Mycobacterium liflandii 128FXT]
gi|183177516|gb|ACC42626.1| PPE family protein [Mycobacterium marinum M]
gi|442584817|gb|AGC63960.1| PPE family protein [Mycobacterium liflandii 128FXT]
Length = 728
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 82/210 (39%), Gaps = 15/210 (7%)
Query: 40 GLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRN 95
G+GL N G+G N N G LG N + +GL N G +GL N G G+GL
Sbjct: 325 GIGLSGDNQIGIGGFNANGAGWNLGFGNDGSFNIGLGNTGNGNIGLANTGDGNIGIGLTG 384
Query: 96 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 155
N G G N G GL N G G N + GL N + G N + G+ N
Sbjct: 385 DNQIGFGGWNSGAGNTGLFNSGAGNSGFFNSGSDNWGLANTGSTNWGAVNSGSLNTGIGN 444
Query: 156 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG---------LGLRNC 206
+ G N + GL N LGL N G LG N+GG +G N
Sbjct: 445 TGSTNTGWWNAGSVNDGLFNAGNANLGLANSGNGNLG--GFNSGGGTSALFGHDIGFFNA 502
Query: 207 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G+ N +G N G G N
Sbjct: 503 GNHNVGMFNAGFANVGWANAGIGNTGAFNV 532
>gi|428299079|ref|YP_007137385.1| pentapeptide repeat-containing protein [Calothrix sp. PCC 6303]
gi|428235623|gb|AFZ01413.1| pentapeptide repeat protein [Calothrix sp. PCC 6303]
Length = 439
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 76/230 (33%), Gaps = 5/230 (2%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N + G+ L N GL LRN N G L+N L N L+ + LR
Sbjct: 133 NLDLSGIDLTGANLNGLDLRNHNLEGANLQNATLEQALLSGANFNRANLQETSFFISDLR 192
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
N + L+ + LR N L N L N L N N LR
Sbjct: 193 NTSFREANLKKGSLQATDLRGANLSQTNLTRTNLSSAYLEGSNLRNSNLNNANLASSILR 252
Query: 135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
+ LRN N LR + G+ LR N G L LR G LR
Sbjct: 253 EADLSQSQLRNANLFSADLRKADLSGVNLRGANLRGADLTQTELENGTLRGTKLDGAILR 312
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
G N L L N + G+ L N N G L N I+
Sbjct: 313 EMKLSG-----ANLSRLNLSNVDFSGVNLSNANLRGTNLSGANLSQAILD 357
>gi|306798226|ref|ZP_07436528.1| hypothetical protein TMFG_01319, partial [Mycobacterium
tuberculosis SUMu006]
gi|308341494|gb|EFP30345.1| hypothetical protein TMFG_01319 [Mycobacterium tuberculosis
SUMu006]
Length = 521
Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 113 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 172
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 173 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 232
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 233 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 292
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 293 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 351
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 123 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 182
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 183 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 242
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 243 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 302
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 303 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 357
>gi|306780393|ref|ZP_07418730.1| hypothetical protein TMBG_00900, partial [Mycobacterium
tuberculosis SUMu002]
gi|308326740|gb|EFP15591.1| hypothetical protein TMBG_00900 [Mycobacterium tuberculosis
SUMu002]
Length = 542
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 134 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 193
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 194 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 253
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 254 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 313
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 314 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 372
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 144 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 203
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 204 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 263
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 264 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 323
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 324 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 378
>gi|195061278|ref|XP_001995962.1| GH14079 [Drosophila grimshawi]
gi|193891754|gb|EDV90620.1| GH14079 [Drosophila grimshawi]
Length = 324
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 61/174 (35%), Gaps = 20/174 (11%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
L + N G LR L RN N + CN L C L+ N
Sbjct: 153 LRFQGVNLAGADLRK-----LDFRNINFKYANMSRCNLSHTNLNYCCLERADLQYANLEC 207
Query: 141 LGLRNC-----NTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNTGG 190
L + N G LR CN G+R N G L + N G+ LR N
Sbjct: 208 AQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNLRVANLKN 267
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
++NCN LR G L CN G L+ N G L++ ++ P
Sbjct: 268 ANMKNCN-----LRAAVLAGADLERCNLSGSDLQEANLRGANLKDAELTLMVTP 316
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 59/177 (33%), Gaps = 25/177 (14%)
Query: 1 MPPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NT 58
M I A I T G G+ L + L RN N + CN L C
Sbjct: 138 MDVIKAIIQTSGNTELRFQGVNLAGADLRKLDFRNINFKYANMSRCNLSHTNLNYCCLER 197
Query: 59 GGLGLRN-------------CNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGG 100
L N N G LR CN G+R N G L + N G
Sbjct: 198 ADLQYANLECAQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAG 257
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
+ LR N ++NCN LR G L CN G L+ N G L++
Sbjct: 258 VNLRVANLKNANMKNCN-----LRAAVLAGADLERCNLSGSDLQEANLRGANLKDAE 309
>gi|254232498|ref|ZP_04925825.1| PPE family protein [Mycobacterium tuberculosis C]
gi|124601557|gb|EAY60567.1| PPE family protein [Mycobacterium tuberculosis C]
Length = 600
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 192 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 251
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 252 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 311
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 312 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 371
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 372 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 430
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 202 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 261
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 262 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 321
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 322 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 381
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 382 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 436
>gi|385991684|ref|YP_005909982.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|339298877|gb|AEJ50987.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length = 555
Score = 37.7 bits (86), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 147 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 206
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 207 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 266
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 267 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 326
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 327 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 385
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 157 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 216
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 217 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 276
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 277 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 336
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 337 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391
>gi|306785143|ref|ZP_07423465.1| hypothetical protein TMCG_00455, partial [Mycobacterium
tuberculosis SUMu003]
gi|308330169|gb|EFP19020.1| hypothetical protein TMCG_00455 [Mycobacterium tuberculosis
SUMu003]
Length = 557
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 149 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 208
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 209 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 268
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 269 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 328
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 329 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 387
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 159 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 218
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 219 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 278
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 279 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 338
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 339 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 393
>gi|306789504|ref|ZP_07427826.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu004]
gi|308334010|gb|EFP22861.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length = 587
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 179 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 238
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 239 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 298
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 299 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 358
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 359 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 417
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 189 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 248
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 249 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 308
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 309 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 368
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 369 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 423
>gi|183985299|ref|YP_001853590.1| PPE family protein [Mycobacterium marinum M]
gi|183178625|gb|ACC43735.1| PPE family protein [Mycobacterium marinum M]
Length = 729
Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 104/244 (42%), Gaps = 22/244 (9%)
Query: 4 IVAP---ISTKGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 57
V P I +GL N NTG L L N G L L + NTGG+ L + NTG N
Sbjct: 192 FVIPGLSIGNRGLLNLGLGNTGNLNLGWGNAGNLNLGSGNTGGINLGSGNTGSF---NPG 248
Query: 58 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC- 116
G G N +G +G N +G G+ N +G +G N +G +G N +G +G N
Sbjct: 249 WGNAGKLNLGSGNIGNMNLGSGNTGILNVGSGNIGDFNLGSGNIGNLNLGSGNIGKGNFG 308
Query: 117 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
NTG L NTGG + NTGG N N+G N N GG N N G
Sbjct: 309 IGNTGNFNLGGGNTGGHNFGSGNTGGHNFGNGNSG-----NHNVGGGNYGNSN---FGSG 360
Query: 175 NCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
N +G G N +G N N G GL G+G N +G +G N +G
Sbjct: 361 NIGSGNFGFGNSGNNNIGFGNSGNNNIGFGLTGDGQIGIGGLNSGSGNIGFGNSGNNNIG 420
Query: 233 LRNC 236
N
Sbjct: 421 FFNS 424
>gi|306793829|ref|ZP_07432131.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu005]
gi|308337812|gb|EFP26663.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
Length = 537
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 129 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 188
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 189 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 248
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 249 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 308
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 309 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 367
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 139 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 198
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 199 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 258
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 259 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 318
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 319 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 373
>gi|308373389|ref|ZP_07432129.2| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308337819|gb|EFP26670.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
Length = 554
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 142 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 201
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 202 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 261
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 262 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 321
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 322 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 381
Query: 235 NCNT 238
N N+
Sbjct: 382 NINS 385
>gi|289762522|ref|ZP_06521900.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|289710028|gb|EFD74044.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length = 561
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 153 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 212
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 213 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 272
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 273 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 332
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 333 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 391
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 163 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 222
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 223 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 282
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 283 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 342
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 343 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 397
>gi|340627366|ref|YP_004745818.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
gi|340005556|emb|CCC44718.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
Length = 607
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 195 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 254
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 255 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 314
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 315 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 374
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 375 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 434
Query: 235 NCNT 238
N N+
Sbjct: 435 NINS 438
>gi|156538483|ref|XP_001606722.1| PREDICTED: BTB/POZ domain-containing protein KCTD9-like [Nasonia
vitripennis]
Length = 391
Score = 37.4 bits (85), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 56/151 (37%), Gaps = 15/151 (9%)
Query: 31 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-----LGLRNCNTGGLGLRN 85
L LRN N LR CN G L +C L + N G + + N LR+
Sbjct: 235 LDLRNINFKYANLRGCNMSGANLTHCCLERADLSHANLEGAQLVCVKMVCANLEAANLRS 294
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
CN G N G+ L+ N G N + LR LRNC+ LR+
Sbjct: 295 CNFEDPGGLPSNMEGVNLKGANLEG-----SNMAAVNLRVATLKHAILRNCD-----LRS 344
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
G L C+ G L N G L++
Sbjct: 345 AVLAGADLECCDLSGSDLHEANLRGANLKDA 375
>gi|422813396|ref|ZP_16861771.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|323719074|gb|EGB28220.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 545
Score = 37.4 bits (85), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 133 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 192
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 193 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 252
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 253 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 312
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 313 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 372
Query: 235 NCNT 238
N N+
Sbjct: 373 NINS 376
>gi|289752049|ref|ZP_06511427.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289692636|gb|EFD60065.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 577
Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 54/126 (42%), Gaps = 7/126 (5%)
Query: 117 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
N G+G N G +GL N TG +GL N TG GL N+GG N G
Sbjct: 5 NQTGIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLF 62
Query: 177 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G N NTG + NTG + + NTGG + NTG N NTG
Sbjct: 63 NAG-----NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGTV 117
Query: 237 NTGGLI 242
NTG I
Sbjct: 118 NTGAFI 123
>gi|308232111|ref|ZP_07414958.2| hypothetical protein TMAG_02915 [Mycobacterium tuberculosis
SUMu001]
gi|308214940|gb|EFO74339.1| hypothetical protein TMAG_02915 [Mycobacterium tuberculosis
SUMu001]
Length = 555
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 147 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 206
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 207 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 266
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 267 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 326
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 327 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 385
Score = 37.4 bits (85), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 157 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 216
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 217 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 276
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 277 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 336
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 337 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 391
>gi|237746492|ref|ZP_04576972.1| outer membrane autotransporter barrel domain-containing protein
[Oxalobacter formigenes HOxBLS]
gi|229377843|gb|EEO27934.1| outer membrane autotransporter barrel domain-containing protein
[Oxalobacter formigenes HOxBLS]
Length = 1414
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 25/210 (11%)
Query: 52 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-RNCNTGGLGLRNCNTGGL--------- 101
G +N N GG + G++N N GG N+GG+ ++ N GG+
Sbjct: 374 GTQNVNDGGSAVSTI-VDDTGIQNVNDGGTATGTTVNSGGV--QHVNDGGIASGTIVNSS 430
Query: 102 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
G +N N GG + + G +N N GG G G++N + + + G
Sbjct: 431 GTQNVNDGGSAV-STTVDDTGTQNVNDGGTATDTVLKSG-GVQNVSGSRAIVDDLTFDGG 488
Query: 162 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL---------G 212
G++N N+G + G +N N GG + + ++N N GG G
Sbjct: 489 GVQNVNSGAT-VSGITVNSSGTQNVNDGGSAVGTIVSSNTSIQNVNDGGTATGTLLYLGG 547
Query: 213 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
++N N G + + G G +N N+G +
Sbjct: 548 VQNVNGSGAVVDSITFDGGGTQNINSGATV 577
>gi|17231361|ref|NP_487909.1| hypothetical protein all3869 [Nostoc sp. PCC 7120]
gi|17133003|dbj|BAB75568.1| all3869 [Nostoc sp. PCC 7120]
Length = 376
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 62/203 (30%), Gaps = 10/203 (4%)
Query: 47 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 106
N G+ L + + L N G L L N N L N N G+
Sbjct: 21 NRQGIDLSGTDLSEINLSKSNWNGADLSEAILTHATLNNTNLSRASLTNANLSGIEGSYL 80
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
N L G L + N G L N + L N G L+ G+ C
Sbjct: 81 NLSWADLNGAYLSGAKLIDANLVGADLCGANLTSIKLIQVNFHGANLQRVKLRGVTFERC 140
Query: 167 NTGGLGLRNCN-----TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + L + G LRN G L + L N G LR N G
Sbjct: 141 DLSEVNLTEADLVRVFLGQANLRNAYLQGANLERADLANANLIKANLDGANLRKANLSG- 199
Query: 222 GLRNCNTGGLGLRNCNTGGLIVP 244
N G + + G I+P
Sbjct: 200 ----ANIYGASFEDADLTGAIMP 218
>gi|195113149|ref|XP_002001131.1| GI10612 [Drosophila mojavensis]
gi|193917725|gb|EDW16592.1| GI10612 [Drosophila mojavensis]
Length = 329
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 59/169 (34%), Gaps = 15/169 (8%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I A I T + G+ L + L RN N + CN L C L
Sbjct: 146 IKAIIQTSAITELRFQGVNLAGADLRKLDFRNINFKYANMSRCNLSHTNLNYCCLERADL 205
Query: 64 RNCNTGGLGLRNC-----NTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGL 113
+ N L + N G LR CN G+R N G L + N G+ L
Sbjct: 206 QYANLECAQLVSVRGLCANMEGANLRGCNFEDPTGVRTNLEGVNLKGACLESSNMAGVNL 265
Query: 114 RNCNTGGLGLRNCNT-----GGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
R N ++NCN G L CN G L+ N G L++
Sbjct: 266 RVANLKNANMKNCNLRGALLAGADLERCNLSGSDLQEANLRGANLKDAE 314
>gi|306780391|ref|ZP_07418728.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308326822|gb|EFP15673.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 571
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 159 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 218
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 219 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 278
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 279 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 338
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 339 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 398
Query: 235 NCNT 238
N N+
Sbjct: 399 NINS 402
>gi|37520242|ref|NP_923619.1| hypothetical protein glr0673 [Gloeobacter violaceus PCC 7421]
gi|35211235|dbj|BAC88614.1| glr0673 [Gloeobacter violaceus PCC 7421]
Length = 181
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%)
Query: 135 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 194
+CN G L N + G+ L + + LR + G L + G + N G+G
Sbjct: 54 SCNLAGANLSNMDLSGVDLSFASLRAVNLRGSDLTGALLNGADLRGAKIEGANLTGVGCF 113
Query: 195 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPK 245
NC GG LR G+ L N + G L N + G +T G I+P
Sbjct: 114 NCQLGGASLRGATMAGMTLSNADLTGADLSNTDFARAGGLARSTIGAILPD 164
>gi|422813398|ref|ZP_16861773.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|323719065|gb|EGB28212.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 546
Score = 37.4 bits (85), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 138 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 197
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 198 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 257
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 258 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 317
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 318 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 376
Score = 37.0 bits (84), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 148 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 207
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 208 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 267
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 268 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 327
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 328 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 382
>gi|308380656|ref|ZP_07669237.1| hypothetical protein TMKG_02605 [Mycobacterium tuberculosis
SUMu011]
gi|308360810|gb|EFP49661.1| hypothetical protein TMKG_02605 [Mycobacterium tuberculosis
SUMu011]
Length = 551
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 69
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 79
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 80 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 121
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 89
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 99
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 100 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 109
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 110 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 119
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 129
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 139
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 140 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 181
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 93 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 149
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 150 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 103 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 159
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 160 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 113 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 169
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 170 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 211
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
+ N TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 102
>gi|113476926|ref|YP_722987.1| pentapeptide repeat-containing protein [Trichodesmium erythraeum
IMS101]
gi|110167974|gb|ABG52514.1| pentapeptide repeat [Trichodesmium erythraeum IMS101]
Length = 448
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 76/235 (32%), Gaps = 14/235 (5%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
LRN N + L L N G N L++ N L N N G
Sbjct: 152 LRNSNLTNVNLSYAELNDANLNEANLIGTNFSYANLSNATLKDANLKDSNLSNVNLVGTQ 211
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N G L N G + N LRN N + LR G N L
Sbjct: 212 LNGANLEGANLEGANLIGTNFSDANLNYTKLRNTNLNHVNLRGVKINH-GTELDNKWYLV 270
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
N G G RN G+ L N + G N G L N N LR N
Sbjct: 271 WDIINHGAYG-RNL--SGVHLENADLKG-----ANIGTANLTNANLEYANLRYAN----- 317
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVPKSK 247
L N N + L N N + L N ++ N L N G ++ ++K
Sbjct: 318 LSNANLAHIKLTNANLADINLIKANLYSANMQGANLSNTLLFNSIMTGALLNQAK 372
>gi|156404115|ref|XP_001640253.1| predicted protein [Nematostella vectensis]
gi|156227386|gb|EDO48190.1| predicted protein [Nematostella vectensis]
Length = 192
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 40/131 (30%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G GG G GG G GG R GG G GG G GG
Sbjct: 1 GFNKGEEGGDGSNKGEEGGDGFNKGEEGGDRSRKGEEGGDGSNKGEEGGDGSNKGEEGGD 60
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
G GG G GG G GG G GG G GG G GG
Sbjct: 61 GFNKGEEGGDGSNKGEEGGDGSNKGEEGGDGFNKEVEGGDGFNEGEEGGDGSNKGEEGGD 120
Query: 132 GLRNCNTGGLG 142
G GG G
Sbjct: 121 GFNKGEEGGDG 131
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 40/131 (30%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
G GG G GG G GG R GG G GG G GG
Sbjct: 1 GFNKGEEGGDGSNKGEEGGDGFNKGEEGGDRSRKGEEGGDGSNKGEEGGDGSNKGEEGGD 60
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
G GG G GG G GG G GG G GG G GG
Sbjct: 61 GFNKGEEGGDGSNKGEEGGDGSNKGEEGGDGFNKEVEGGDGFNEGEEGGDGSNKGEEGGD 120
Query: 142 GLRNCNTGGLG 152
G GG G
Sbjct: 121 GFNKGEEGGDG 131
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 40/131 (30%)
Query: 32 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 91
G GG G GG G GG R GG G GG G GG
Sbjct: 1 GFNKGEEGGDGSNKGEEGGDGFNKGEEGGDRSRKGEEGGDGSNKGEEGGDGSNKGEEGGD 60
Query: 92 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 151
G GG G GG G GG G GG G GG G GG
Sbjct: 61 GFNKGEEGGDGSNKGEEGGDGSNKGEEGGDGFNKEVEGGDGFNEGEEGGDGSNKGEEGGD 120
Query: 152 GLRNCNTGGLG 162
G GG G
Sbjct: 121 GFNKGEEGGDG 131
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 40/131 (30%)
Query: 52 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 111
G GG G GG G GG R GG G GG G GG
Sbjct: 1 GFNKGEEGGDGSNKGEEGGDGFNKGEEGGDRSRKGEEGGDGSNKGEEGGDGSNKGEEGGD 60
Query: 112 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
G GG G GG G GG G GG G GG G GG
Sbjct: 61 GFNKGEEGGDGSNKGEEGGDGSNKGEEGGDGFNKEVEGGDGFNEGEEGGDGSNKGEEGGD 120
Query: 172 GLRNCNTGGLG 182
G GG G
Sbjct: 121 GFNKGEEGGDG 131
>gi|306798224|ref|ZP_07436526.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu006]
gi|308341495|gb|EFP30346.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006]
Length = 537
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 125 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 184
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 185 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 244
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 245 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 304
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 305 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 364
Query: 235 NCNT 238
N N+
Sbjct: 365 NINS 368
>gi|306785141|ref|ZP_07423463.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308330171|gb|EFP19022.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 547
Score = 37.0 bits (84), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 135 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 194
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 195 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 254
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 255 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 314
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 315 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 374
Query: 235 NCNT 238
N N+
Sbjct: 375 NINS 378
>gi|339632381|ref|YP_004724023.1| PPE family protein [Mycobacterium africanum GM041182]
gi|339331737|emb|CCC27439.1| PPE family protein [Mycobacterium africanum GM041182]
Length = 515
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 98/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 103 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 162
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG-------------- 120
N +G G +N +G +G N +G +G N +G +G N G
Sbjct: 163 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 222
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 223 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 282
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 283 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 342
Query: 235 NCNT 238
N N+
Sbjct: 343 NINS 346
>gi|306968502|ref|ZP_07481163.1| hypothetical protein TMIG_01030, partial [Mycobacterium
tuberculosis SUMu009]
gi|308353911|gb|EFP42762.1| hypothetical protein TMIG_01030 [Mycobacterium tuberculosis
SUMu009]
Length = 532
Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G G N +G +G N G +G N +G G N G +G
Sbjct: 120 NFGFGNIGSLNLGSGNTGDTNVGSGNIGNTNLGGGNIGSFNLGSGNQGDINLGIGNVGNL 179
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-------------LRNCNTGG- 120
N +G G +N +G +G N +G +G N +G +G + NTG
Sbjct: 180 NLGSGNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSN 239
Query: 121 -LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 177
+G N +G G N N G+GL G+G N +G +G N TG +GL N
Sbjct: 240 NIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSG 299
Query: 178 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 234
TG +G N T G N G N + GL N NTG N N G L
Sbjct: 300 TGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGNTGFFDAGNYNFGSLNAG 359
Query: 235 NCNT 238
N N+
Sbjct: 360 NINS 363
>gi|183982826|ref|YP_001851117.1| PPE family protein [Mycobacterium marinum M]
gi|183176152|gb|ACC41262.1| PPE family protein [Mycobacterium marinum M]
Length = 1021
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 120 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG--LRNCNTGGLGLRNC- 176
G+GL N TG +GL N G +G N +G G+ N TG G + N G GL N
Sbjct: 298 GIGLLNSGTGNVGLFNSGDGNIGFFNSGSGNFGIGN--TGNFGTGIFNSGNGSTGLFNAG 355
Query: 177 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
NTG L + + NTG L + N GG + NTG + NTG L + NTG L
Sbjct: 356 SFNTGVLNVGDGNTGILNTGSYNMGGFNPGSSNTGSFNIGGANTGWLNAGSINTGIL 412
Score = 37.0 bits (84), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG--LRNCNTGGLGLRNC- 186
G+GL N TG +GL N G +G N +G G+ N TG G + N G GL N
Sbjct: 298 GIGLLNSGTGNVGLFNSGDGNIGFFNSGSGNFGIGN--TGNFGTGIFNSGNGSTGLFNAG 355
Query: 187 --NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
NTG L + + NTG L + N GG + NTG + NTG L + NTG L
Sbjct: 356 SFNTGVLNVGDGNTGILNTGSYNMGGFNPGSSNTGSFNIGGANTGWLNAGSINTGIL 412
>gi|344940101|ref|ZP_08779389.1| pentapeptide repeat protein [Methylobacter tundripaludum SV96]
gi|344261293|gb|EGW21564.1| pentapeptide repeat protein [Methylobacter tundripaludum SV96]
Length = 258
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 71/190 (37%), Gaps = 10/190 (5%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 65
A + K L + GL RN + G LRN N L N + GL L + L
Sbjct: 42 AQLRRKDLTGLDLSGLDFRNADLWGADLRNAN-----LSNSDLSGLNLDLTVMTKINLSG 96
Query: 66 CNTGGLGLRNCNTGGLGLRNCN-TGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGL- 121
N + + GG L N N TG + N + L N + G+ ++N G +
Sbjct: 97 ANLSNASIFGVHMGGANLSNANLTGSRFIANLDRSNLSHANLSHANWGVDMKNQPMGLMR 156
Query: 122 -GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L N N G L + N +R+ N G L+N G+ L + L +
Sbjct: 157 VSLNNVNLSGANLSDANLNRALMRHANLSGSVLKNTVLFGVDLSGADLTDADLSGADLSE 216
Query: 181 LGLRNCNTGG 190
L + + G
Sbjct: 217 SKLEDADFTG 226
>gi|403269512|ref|XP_003926776.1| PREDICTED: LOW QUALITY PROTEIN: mucin-19 [Saimiri boliviensis
boliviensis]
Length = 7045
Score = 37.0 bits (84), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 87/214 (40%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
T GL +G GL TG +G TG L TG L TG L TG
Sbjct: 3475 TSGLSAGVSGTTGLSAGETGTIGSPAEVTGTSELSAEVTGTSVLSTGVTGTSLLSAGVTG 3534
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
GL + TG L + TG +G TG GL TG +GL TG GL TG
Sbjct: 3535 TSGLSDGMTGTTVLSSGVTGTIGSPAEATGTTGLSARVTGTIGLSAGVTGTSGLSAGVTG 3594
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
GL TG GL + TG L + TG +G TG GL TG GL TG
Sbjct: 3595 TSGLSAGVTGTSGLLDGMTGTTVLSSEVTGTIGSPAEATGTSGLSAGVTGTSGLSAGVTG 3654
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 223
GL TG GL TG GL TG GL
Sbjct: 3655 TSGLSAGVTGTSGLSAGVTGISGLSAGVTGPTGL 3688
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.145 0.478
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,607,096,744
Number of Sequences: 23463169
Number of extensions: 324559168
Number of successful extensions: 885196
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1605
Number of HSP's successfully gapped in prelim test: 3495
Number of HSP's that attempted gapping in prelim test: 549138
Number of HSP's gapped (non-prelim): 65843
length of query: 272
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 132
effective length of database: 9,074,351,707
effective search space: 1197814425324
effective search space used: 1197814425324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)