BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5554
(272 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6C908|PAN1_YARLI Actin cytoskeleton-regulatory complex protein PAN1 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PAN1 PE=3 SV=1
Length = 1634
Score = 57.8 bits (138), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Query: 124 RNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGG 180
+ TG ++ +TG ++ TGG+ L+ TG + L+ +TG L++ TGG
Sbjct: 374 QQQATGYQPMQQQSTGYPMQAMQPQITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGG 433
Query: 181 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
L++ TGG L++ TGG L++ TGG L+ +TG L+ +TG L+ +TG
Sbjct: 434 APLQSQLTGGAPLQSQLTGGAPLQSQLTGGAPLQQQSTGYAPLQQQSTGYAPLQQQSTG- 492
Query: 241 LIVPKSKRGAQENAS 255
+P+ + G Q ++
Sbjct: 493 -YMPQQQTGMQPQST 506
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 24 RNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGG 80
+ TG ++ +TG ++ TGG+ L+ TG + L+ +TG L++ TGG
Sbjct: 374 QQQATGYQPMQQQSTGYPMQAMQPQITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGG 433
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
L++ TGG L++ TGG L++ TGG L+ +TG L+ +TG L+ +TG
Sbjct: 434 APLQSQLTGGAPLQSQLTGGAPLQSQLTGGAPLQQQSTGYAPLQQQSTGYAPLQQQSTGY 493
Query: 141 LGLRNCNTGGLGLRNCNTG 159
+ + G++ +TG
Sbjct: 494 MPQQQT-----GMQPQSTG 507
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 54 RNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGG 110
+ TG ++ +TG ++ TGG+ L+ TG + L+ +TG L++ TGG
Sbjct: 374 QQQATGYQPMQQQSTGYPMQAMQPQITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGG 433
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
L++ TGG L++ TGG L++ TGG L+ +TG L+ +TG L+ +TG
Sbjct: 434 APLQSQLTGGAPLQSQLTGGAPLQSQLTGGAPLQQQSTGYAPLQQQSTGYAPLQQQSTGY 493
Query: 171 LGLRNCNTGGLGLRNCNTG 189
+ + G++ +TG
Sbjct: 494 MPQQQT-----GMQPQSTG 507
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 84 RNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGG 140
+ TG ++ +TG ++ TGG+ L+ TG + L+ +TG L++ TGG
Sbjct: 374 QQQATGYQPMQQQSTGYPMQAMQPQITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGG 433
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 200
L++ TGG L++ TGG L++ TGG L+ +TG L+ +TG L+ +TG
Sbjct: 434 APLQSQLTGGAPLQSQLTGGAPLQSQLTGGAPLQQQSTGYAPLQQQSTGYAPLQQQSTGY 493
Query: 201 LGLRNCNTGGLGLRNCNTG 219
+ + G++ +TG
Sbjct: 494 MPQQQT-----GMQPQSTG 507
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 11 KGLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
+ ++ TGG+ L+ TG + L+ +TG L++ TGG L++ TGG L++ TG
Sbjct: 393 QAMQPQITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGGAPLQSQLTGGAPLQSQLTG 452
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G L++ TGG L+ +TG L+ +TG L+ +TG + + G++ +TG
Sbjct: 453 GAPLQSQLTGGAPLQQQSTGYAPLQQQSTGYAPLQQQSTGYMPQQQT-----GMQPQSTG 507
>sp|Q6MWY2|PPE54_MYCTU Uncharacterized PPE family protein PPE54 OS=Mycobacterium
tuberculosis GN=ppe54 PE=3 SV=1
Length = 2523
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 1597
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Query: 89 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 146
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 147 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 203
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2134
Query: 204 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
NTGG + NTG L + NTG + NTG I
Sbjct: 2135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFI 2173
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 2134
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 193
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2135 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGF 2193
Query: 194 RNCNT 198
+T
Sbjct: 2194 SYTST 2198
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 126
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 183
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 373
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
NTGG + NTG L + NTG + NTG
Sbjct: 374 GEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 76
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 77 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 133
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 134 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 171
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 70/158 (44%), Gaps = 5/158 (3%)
Query: 49 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC 106
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 107 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGL 163
TG +G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNA 1558
Query: 164 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
NTGG + NTG L + NTG + NTG
Sbjct: 1559 GQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 2018 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 2077
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 2078 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 2137
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
NTGG + NTG L + NTG + NTG N + G R G LG
Sbjct: 2138 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNGAF-WRGDYQGLLGFSYT 2196
Query: 187 NT 188
+T
Sbjct: 2197 ST 2198
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 257 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 316
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 317 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEA 376
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 377 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 411
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
G N + GL N G +G N +G G+GL N G G N +G +GL N TG
Sbjct: 1442 GFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTG 1501
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNC 126
+G N TG G+ N + G+ N GL N NTG + + NTG
Sbjct: 1502 NVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQA 1561
Query: 127 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
NTGG + NTG L + NTG + NTG
Sbjct: 1562 NTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 59 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 114
G +GL N G +GL N +G N + GL N G +G N +G G+GL
Sbjct: 1422 GNVGLANSGLTPGLMGLGN-----IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLT 1476
Query: 115 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 174
N G G N +G +GL N TG +G N TG G+ N + G+ N GL
Sbjct: 1477 GDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLF 1536
Query: 175 NC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 231
N NTG + + NTG NTGG + NTG L + NTG + NTG
Sbjct: 1537 NAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAF 1596
Score = 39.3 bits (90), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 110 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 162
GLG G +GL N G GL N G +G N +G G+GL N G G
Sbjct: 240 GLGNSGLTPGLMGLGNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFG 299
Query: 163 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 219
N +G +GL N TG +G N TG G+ N + G+ N GL N NTG
Sbjct: 300 GFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTG 359
Query: 220 GLGLRNCNTGGLGLRNCNTGGL 241
+ + NTG NTGG
Sbjct: 360 VVNAGSYNTGSFNAGEANTGGF 381
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 51 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 108
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 109 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
+GL N TG +G N TG LG+ N
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNS 828
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 128
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 129 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 156
+GL N TG +G N TG LG+ N
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNS 828
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 81 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 138
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 166
+GL N TG +G N TG LG+ N
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNS 828
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 91 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 148
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 149 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 176
+GL N TG +G N TG LG+ N
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNS 828
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 101 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 158
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 159 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 186
+GL N TG +G N TG LG+ N
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNS 828
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 111 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 168
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 169 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
+GL N TG +G N TG LG+ N
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNS 828
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 178
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 179 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 206
+GL N TG +G N TG LG+ N
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNS 828
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 188
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 189 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 216
+GL N TG +G N TG LG+ N
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNS 828
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 141 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 198
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 199 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 226
+GL N TG +G N TG LG+ N
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNS 828
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 151 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNT 208
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 209 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+GL N TG +G N TG LG+ N
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNS 828
>sp|Q52118|YMO3_ERWST Uncharacterized protein in mobD 3'region OS=Erwinia stewartii PE=4
SV=1
Length = 295
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 67/215 (31%)
Query: 16 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 75
N G+ L + + G L + N L + N L N L L N
Sbjct: 67 INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSN 126
Query: 76 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 135
N G L N N L N N G L + N L + L N + L N
Sbjct: 127 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSN 186
Query: 136 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 195
N G L N N L N N G L + N L + L N + L +
Sbjct: 187 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSD 246
Query: 196 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 230
N L N + L N G L + N G
Sbjct: 247 ANLSDANLTNVDLKRADLSNAILKGANLLHINVEG 281
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 67/215 (31%)
Query: 26 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 85
N G+ L + + G L + N L + N L N L L N
Sbjct: 67 INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSN 126
Query: 86 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 145
N G L N N L N N G L + N L + L N + L N
Sbjct: 127 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSN 186
Query: 146 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 205
N G L N N L N N G L + N L + L N + L +
Sbjct: 187 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSD 246
Query: 206 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 240
N L N + L N G L + N G
Sbjct: 247 ANLSDANLTNVDLKRADLSNAILKGANLLHINVEG 281
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 64/208 (30%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 72
L + + G L + N L + N L N L L N N G
Sbjct: 74 LSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSNANLSGAD 133
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N N L N N G L + N L + L N + L N N G
Sbjct: 134 LTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSNANLSGAD 193
Query: 133 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 192
L N N L N N G L + N L + L N + L + N
Sbjct: 194 LTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSDANLSDAN 253
Query: 193 LRNCNTGGLGLRNCNTGGLGLRNCNTGG 220
L N + L N G L + N G
Sbjct: 254 LTNVDLKRADLSNAILKGANLLHINVEG 281
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 64/200 (32%), Gaps = 5/200 (2%)
Query: 6 APISTKGLRNCNTGGLGLRNCNTGGLGLRNCNT-----GGLGLRNCNTGGLGLRNCNTGG 60
A +S L + + L + N G L + N L N N G L N N
Sbjct: 82 AYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSNANLSGADLTNANLNQ 141
Query: 61 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 120
L N N G L + N L + L N + L N N G L N N
Sbjct: 142 TDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSNANLSGADLTNANLNQ 201
Query: 121 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 180
L N N G L + N L + L N + L + N L N +
Sbjct: 202 TDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSDANLSDANLTNVDLKR 261
Query: 181 LGLRNCNTGGLGLRNCNTGG 200
L N G L + N G
Sbjct: 262 ADLSNAILKGANLLHINVEG 281
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 55/166 (33%)
Query: 5 VAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 64
+A +S L N N G L N N L N N G L + N L + L
Sbjct: 116 MAYLSEADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLS 175
Query: 65 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 124
N + L N N G L N N L N N G L + N L + L
Sbjct: 176 NADLKRADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLS 235
Query: 125 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
N + L + N L N + L N G L + N G
Sbjct: 236 NADLKRADLSDANLSDANLTNVDLKRADLSNAILKGANLLHINVEG 281
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 44/139 (31%)
Query: 106 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 165
N G+ L + + G L + N L + N L N L L N
Sbjct: 67 INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSN 126
Query: 166 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 225
N G L N N L N N G L + N L + L N + L N
Sbjct: 127 ANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSN 186
Query: 226 CNTGGLGLRNCNTGGLIVP 244
N G L N N +P
Sbjct: 187 ANLSGADLTNANLNQTDLP 205
>sp|Q8ILR9|YPF17_PLAF7 Protein PF14_0175 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0175
PE=4 SV=1
Length = 4662
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 3/216 (1%)
Query: 42 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 101
L N +G+ N +G+ N +G+ N +G+ N + + N +
Sbjct: 3932 SLNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVSMNQPNINNV 3991
Query: 102 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 161
+ N + + N + NT + +T + +T + +T
Sbjct: 3992 NMNQPNINNVSMNQPNINNFSMNQSNTNNFNMNKPSTSSFSMNQPSTNNFSMNKSSTNNF 4051
Query: 162 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 221
+ + + +T + +T +T + N + + NT +
Sbjct: 4052 SINQTSANNFSMHQPSTNNFSMNKPSTNNFSTNKPSTNNFSMNQPNINNISMNQPNTNNV 4111
Query: 222 GLRNCNTGGLGLRNCNTGGLIVPK---SKRGAQENA 254
+ N N G+ + N I + SK+ ENA
Sbjct: 4112 HMNNLNMNQSGMNHTNMTSPIFNQSNSSKQSVNENA 4147
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/223 (13%), Positives = 70/223 (31%), Gaps = 3/223 (1%)
Query: 22 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 81
L N +G+ N +G+ N +G+ N +G+ N + + N +
Sbjct: 3932 SLNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVSMNQPNINNV 3991
Query: 82 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 141
+ N + + N + NT + +T + +T + +T
Sbjct: 3992 NMNQPNINNVSMNQPNINNFSMNQSNTNNFNMNKPSTSSFSMNQPSTNNFSMNKSSTNNF 4051
Query: 142 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 201
+ + + +T + +T +T + N + + NT +
Sbjct: 4052 SINQTSANNFSMHQPSTNNFSMNKPSTNNFSTNKPSTNNFSMNQPNINNISMNQPNTNNV 4111
Query: 202 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
+ N N G+ + N N+ ++ N + P
Sbjct: 4112 HMNNLNMNQSGMNHTNMTSPIFNQSNSSK---QSVNENAFVPP 4151
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/174 (17%), Positives = 54/174 (31%), Gaps = 2/174 (1%)
Query: 68 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 127
+ L N N G+ N N G+ N N G+ N N G+ N N + N N
Sbjct: 3930 STSLNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVSMNQPNIN 3989
Query: 128 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
+ N N + N N + NT + +T + +T + +
Sbjct: 3990 NVNMNQPNINNVSMNQPNIN--NFSMNQSNTNNFNMNKPSTSSFSMNQPSTNNFSMNKSS 4047
Query: 188 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
T + + + +T + +T +T + N +
Sbjct: 4048 TNNFSINQTSANNFSMHQPSTNNFSMNKPSTNNFSTNKPSTNNFSMNQPNINNI 4101
>sp|Q79FL2|PPE24_MYCTU Uncharacterized PPE family protein PPE24 OS=Mycobacterium
tuberculosis GN=ppe24 PE=3 SV=1
Length = 1053
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 82
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 83 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 140
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 141 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 198 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 229
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 33 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 92
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 93 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 150
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 151 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G+ N NTGG + NTG + NTG L + N NTG L + N G + N
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSN 400
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG N NTG L N NTG + + N G
Sbjct: 401 TGTFNTGNANTGFLNAGNINTGVFNIGHMNNG 432
Score = 38.5 bits (88), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 74/174 (42%), Gaps = 10/174 (5%)
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 132
L N LG N +G G N + LG N G LG N G LG N NTG
Sbjct: 226 LANIGNANLGNYNFGSGNFGNSNIGSASLGNNNIGFGNLGSNNVGVGNLG--NLNTG--- 280
Query: 133 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
N G G N N G+GL N G+G N TG GL N +G +G N G
Sbjct: 281 FANTGLGNFGFGNTGNNNIGIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGN 340
Query: 191 LGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
G+ N NTGG + NTG + NTG L + N NTG L + N G
Sbjct: 341 FGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDF 394
>sp|Q79FS0|PPE16_MYCTU Uncharacterized PPE family protein PPE16 OS=Mycobacterium
tuberculosis GN=ppe16 PE=3 SV=1
Length = 618
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 91/257 (35%), Gaps = 27/257 (10%)
Query: 17 NTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLG 72
N G N G + + N G +G N LG+ N LG+ N N G+G
Sbjct: 290 NVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNNNIGIG 349
Query: 73 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 129
L N G+G N G LG N +GL N +G N G N NTG
Sbjct: 350 LTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTG 409
Query: 130 -------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 179
G N +G G N G N +G+ N NTG NTG
Sbjct: 410 FGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTG 469
Query: 180 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCNTG 229
L + NTG + NTGG + NTG G N TG G N
Sbjct: 470 DLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDA 529
Query: 230 GLGLRNCNTGGLIVPKS 246
G +N NTG + S
Sbjct: 530 NSGFQNTNTGAFFIGHS 546
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 83/226 (36%), Gaps = 5/226 (2%)
Query: 19 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 78
G GL N G G N + G N + +G N + +G N LG+ N
Sbjct: 274 GNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGN 333
Query: 79 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 136
LG+ N N G+GL N G+G N G LG N +GL N +G N
Sbjct: 334 NNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNS 393
Query: 137 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 196
G N G N G N +G G N G N +G+ N
Sbjct: 394 GDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNS 453
Query: 197 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
NTG NTG L + NTG + NTGG + NTG
Sbjct: 454 GAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTG 499
Score = 38.5 bits (88), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 82/226 (36%), Gaps = 5/226 (2%)
Query: 21 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
LG N G GL N G G N + G N + +G N + +G N
Sbjct: 266 LGSGNDGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNN 325
Query: 81 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 138
LG+ N LG+ N N G+GL N G+G N G LG N +GL N
Sbjct: 326 LGIANLGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGN 385
Query: 139 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 198
+G N G N G N G N +G G N G N
Sbjct: 386 NNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSGF 445
Query: 199 GGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 241
+G+ N NTG NTG L + NTG + NTGG
Sbjct: 446 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGF 491
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 85/233 (36%), Gaps = 4/233 (1%)
Query: 8 ISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 67
I L N NTG L + NTG L + NTG + NT + N G L L + N
Sbjct: 211 IGDYNLGNGNTGNANLGSGNTGQANLGSGNTGFFNFGSGNTANTNFGSGNLGNLNLGSGN 270
Query: 68 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
G GL N G G N + G N + +G N + +G N LG+ N
Sbjct: 271 DGNGNFGLGNIGDGNRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIAN 330
Query: 126 CNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 183
LG+ N N G+GL N G+G N G LG N +GL N +G
Sbjct: 331 LGNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGF 390
Query: 184 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
N G N G N G N +G G N G N
Sbjct: 391 FNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNS 443
>sp|Q10778|PPE21_MYCTU Uncharacterized PPE family protein PPE21 OS=Mycobacterium
tuberculosis GN=ppe21 PE=3 SV=2
Length = 678
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 4 IVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 63
I+A L N GG L +G LGL N G + NTG + L N N G L L
Sbjct: 183 IIAGFPFLDLGNVTIGGFNLA---SGNLGLGNL--GSFNPGSANTGSVNLGNANIGDLNL 237
Query: 64 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 123
+ N G L NTG L N ++G G N +G +G N G LG N +G G
Sbjct: 238 GSGNIGSYNLGGGNTGDL---NPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNTGD 294
Query: 124 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNT 178
N NTG L + NTG NTG + N NTG G N +G +G N +
Sbjct: 295 TNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGS 354
Query: 179 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 236
+G N N G GL N G G N +G LG N G +G N +G+ N
Sbjct: 355 HNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNS 414
Score = 38.1 bits (87), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 92/229 (40%), Gaps = 17/229 (7%)
Query: 27 NTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLG 82
NTG + N NTG G N +G +G N + +G N N G GL N G G
Sbjct: 321 NTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFG 380
Query: 83 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG 139
N +G LG N G +G N +G+ N G +G + G R+ N+G
Sbjct: 381 ALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFGSSAERSSGFGNSG 439
Query: 140 GLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN----TGGLGL 193
L N+G L G N T G N T G N T G+ N TG +GL
Sbjct: 440 ELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGL 499
Query: 194 RNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
N NTG + NTG N NTG N NTG + NTG
Sbjct: 500 FNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTG 548
Score = 35.0 bits (79), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 72/182 (39%), Gaps = 13/182 (7%)
Query: 20 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 79
G GL N G G N +G LG N G +G N +G+ N G +G + G
Sbjct: 368 GFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMGNSGNG-VGALSVEFG 426
Query: 80 GLGLRNC---NTGGLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 134
R+ N+G L N+G L G N T G N T G N T G+
Sbjct: 427 SSAERSSGFGNSGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIG 486
Query: 135 NCN----TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
N TG +GL N NTG + NTG N NTG N NTG + N
Sbjct: 487 NSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLN 546
Query: 188 TG 189
TG
Sbjct: 547 TG 548
>sp|Q7D7A1|PPE40_MYCTU Uncharacterized PPE family protein PPE40 OS=Mycobacterium
tuberculosis GN=ppe40 PE=3 SV=1
Length = 615
Score = 38.5 bits (88), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 95/239 (39%), Gaps = 10/239 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N G +G N +G +G N +G +G N +G G N +G G N +G G
Sbjct: 207 NLGVGNIGSLNLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDY 266
Query: 75 NCNTGGLGLRNCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
N +G G N +G +G N +G G L N N G + NTG N G L
Sbjct: 267 NPGSGNFGSGNFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTL 326
Query: 132 --GLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N +G G N N G+GL G+G N TG +G N +G N
Sbjct: 327 NFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSG 386
Query: 188 TGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIV 243
G +G N G G N NTG N NTG N N G N N+G V
Sbjct: 387 DGNIGFFNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNV 445
Score = 38.5 bits (88), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 94/235 (40%), Gaps = 10/235 (4%)
Query: 15 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 74
N +G +G N +G +G N +G G N +G G N +G G N +G G
Sbjct: 217 NLGSGNIGGTNVGSGNVGGTNLGSGNYGSLNWGSGNTGTGNAGSGNTGDYNPGSGNFGSG 276
Query: 75 NCNTGGLGLRNCNTGGLG---LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTG 129
N +G +G N +G G L N N G + NTG N G L G N +G
Sbjct: 277 NFGSGNIGSLNVGSGNFGTLNLANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSG 336
Query: 130 GLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 187
G N N G+GL G+G N TG +G N +G N G +G N
Sbjct: 337 NFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSG 396
Query: 188 TGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G G N NTG N NTG N N G N N+G + NTG
Sbjct: 397 DGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTG 451
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 79/204 (38%), Gaps = 7/204 (3%)
Query: 13 LRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTGGLGLRNC--NTGGLGLRNCNT 68
L N N G + NTG N G L G N +G G N N G+GL
Sbjct: 298 LANGNNGDVNFGGGNTGDFNFGGGNNGTLNFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQ 357
Query: 69 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRN 125
G+G N TG +G N +G N G +G N G G N NTG N
Sbjct: 358 IGIGGLNSGTGNIGFGNSGNNNIGFFNSGDGNIGFFNSGDGNTGFGNAGNINTGFWNAGN 417
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
NTG N N G N N+G + NTG NTG + NTG N
Sbjct: 418 LNTGFGSAGNGNVGIFDGGNSNSGSFNVGFQNTGFGNSGAGNTGFFNAGDSNTGFANAGN 477
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTG 209
NTG + NTGG N NTG
Sbjct: 478 VNTGFFNGGDINTGGFNGGNVNTG 501
>sp|Q61282|PGCA_MOUSE Aggrecan core protein OS=Mus musculus GN=Acan PE=1 SV=2
Length = 2132
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 77/212 (36%), Gaps = 11/212 (5%)
Query: 38 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 97
+GG GL +G + TG GL +G L +G G +G +
Sbjct: 933 SGGDGLETSTSGVDDVSGIPTGREGLETSASGVEDLSGLPSGEEGSETSTSGIEDISVLP 992
Query: 98 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT--GGL-----GLRNCNTGG 150
TGG L +G L +GG L +G + T GGL G+ +
Sbjct: 993 TGGESLETSASGVGDLSGLPSGGESLETSASGAEDVTQLPTERGGLETSASGVEDITVLP 1052
Query: 151 LGLRNCNTGGLGLRNCN---TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 207
G + T G+ + + +G GL +G + T GL +GG +
Sbjct: 1053 TGRESLETSASGVEDVSGLPSGREGLETSASGIEDISVFPTEAEGLDTSASGGY-VSGIP 1111
Query: 208 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
+GG G +G + +GG GL +G
Sbjct: 1112 SGGDGTETSASGVEDVSGLPSGGEGLETSASG 1143
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 72/209 (34%), Gaps = 1/209 (0%)
Query: 11 KGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 70
GL +G + TG GL +G L +G G +G + TGG
Sbjct: 936 DGLETSTSGVDDVSGIPTGREGLETSASGVEDLSGLPSGEEGSETSTSGIEDISVLPTGG 995
Query: 71 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 130
L +G L +GG L +G + T GL +G + TG
Sbjct: 996 ESLETSASGVGDLSGLPSGGESLETSASGAEDVTQLPTERGGLETSASGVEDITVLPTGR 1055
Query: 131 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 190
L +G + +G GL +G + T GL +GG + +GG
Sbjct: 1056 ESLETSASGVEDVSGLPSGREGLETSASGIEDISVFPTEAEGLDTSASGGY-VSGIPSGG 1114
Query: 191 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG 219
G +G + +GG GL +G
Sbjct: 1115 DGTETSASGVEDVSGLPSGGEGLETSASG 1143
>sp|Q7Z5P9|MUC19_HUMAN Mucin-19 OS=Homo sapiens GN=MUC19 PE=1 SV=2
Length = 6254
Score = 35.4 bits (80), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 83/230 (36%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
T GL TG +G TG GL TG G TG G TG G TG
Sbjct: 3895 TTGLSAGVTGTIGSSAVVTGINGLSAGVTGTTGPSAEETGATGPSAEVTGTTGPSAEETG 3954
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G TG G TG GL TG G TG G+ TG +G TG
Sbjct: 3955 ATGPSAEVTGTTGPSGGVTGTNGLSAEVTGTTGPSAEVTGLPGVSAGVTGTIGSPAAVTG 4014
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
+ TG GL TG GL TG GL T +G TG GL TG
Sbjct: 4015 TIRPSAVVTGITGLSAEVTGTTGLSAWVTGIAGLSAGVTETIGSSAGVTGTNGLSAEATG 4074
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
G TG GL TG GL T GL TG GL TG
Sbjct: 4075 TTGPSAGVTGTTGLSAGVTGTAGLSARVTESTGLSAGVTGTTGLSAGVTG 4124
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 85/237 (35%)
Query: 3 PIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 62
P+ T G+ TG GL TG +G TG GL TG G TG G
Sbjct: 3878 PLAGVTGTTGISAGVTGTTGLSAGVTGTIGSSAVVTGINGLSAGVTGTTGPSAEETGATG 3937
Query: 63 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 122
TG G TG G TG G TG GL TG G TG G
Sbjct: 3938 PSAEVTGTTGPSAEETGATGPSAEVTGTTGPSGGVTGTNGLSAEVTGTTGPSAEVTGLPG 3997
Query: 123 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 182
+ TG +G TG + TG GL TG GL TG GL T +G
Sbjct: 3998 VSAGVTGTIGSPAAVTGTIRPSAVVTGITGLSAEVTGTTGLSAWVTGIAGLSAGVTETIG 4057
Query: 183 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
TG GL TG G TG GL TG GL T GL TG
Sbjct: 4058 SSAGVTGTNGLSAEATGTTGPSAGVTGTTGLSAGVTGTAGLSARVTESTGLSAGVTG 4114
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 81/228 (35%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
GL TG G TG G TG G TG G TG G TG
Sbjct: 3917 GLSAGVTGTTGPSAEETGATGPSAEVTGTTGPSAEETGATGPSAEVTGTTGPSGGVTGTN 3976
Query: 72 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 131
GL TG G TG G+ TG +G TG + TG GL TG
Sbjct: 3977 GLSAEVTGTTGPSAEVTGLPGVSAGVTGTIGSPAAVTGTIRPSAVVTGITGLSAEVTGTT 4036
Query: 132 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 191
GL TG GL T +G TG GL TG G TG GL TG
Sbjct: 4037 GLSAWVTGIAGLSAGVTETIGSSAGVTGTNGLSAEATGTTGPSAGVTGTTGLSAGVTGTA 4096
Query: 192 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 239
GL T GL TG GL TG G TG GL TG
Sbjct: 4097 GLSARVTESTGLSAGVTGTTGLSAGVTGTTGPSAGITGTNGLSAEVTG 4144
Score = 31.6 bits (70), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 79/223 (35%)
Query: 10 TKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 69
T G TG G TG G TG G TG G TG GL TG
Sbjct: 3925 TTGPSAEETGATGPSAEVTGTTGPSAEETGATGPSAEVTGTTGPSGGVTGTNGLSAEVTG 3984
Query: 70 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 129
G TG G+ TG +G TG + TG GL TG GL TG
Sbjct: 3985 TTGPSAEVTGLPGVSAGVTGTIGSPAAVTGTIRPSAVVTGITGLSAEVTGTTGLSAWVTG 4044
Query: 130 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 189
GL T +G TG GL TG G TG GL TG GL T
Sbjct: 4045 IAGLSAGVTETIGSSAGVTGTNGLSAEATGTTGPSAGVTGTTGLSAGVTGTAGLSARVTE 4104
Query: 190 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 232
GL TG GL TG G TG GL TG G
Sbjct: 4105 STGLSAGVTGTTGLSAGVTGTTGPSAGITGTNGLSAEVTGTTG 4147
>sp|Q79FW4|PPE12_MYCTU Uncharacterized PPE family protein PPE12 OS=Mycobacterium
tuberculosis GN=ppe12 PE=3 SV=1
Length = 645
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 77/192 (40%), Gaps = 5/192 (2%)
Query: 23 LRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 80
L N G +G N + G N N G+GL N G G N +G +G N TG
Sbjct: 325 LGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGN 384
Query: 81 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 137
+G N +G G+ N NTG N NTG NTG + NTG N
Sbjct: 385 IGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQAN 444
Query: 138 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 197
TG + NTG NTG N+G + N+G L NTG N N
Sbjct: 445 TGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNIN 504
Query: 198 TGGLGLRNCNTG 209
TGG N NTG
Sbjct: 505 TGGFNAGNLNTG 516
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 77/192 (40%), Gaps = 5/192 (2%)
Query: 43 LRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 100
L N G +G N + G N N G+GL N G G N +G +G N TG
Sbjct: 325 LGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGN 384
Query: 101 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 157
+G N +G G+ N NTG N NTG NTG + NTG N
Sbjct: 385 IGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQAN 444
Query: 158 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 217
TG + NTG NTG N+G + N+G L NTG N N
Sbjct: 445 TGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNIN 504
Query: 218 TGGLGLRNCNTG 229
TGG N NTG
Sbjct: 505 TGGFNAGNLNTG 516
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 77/192 (40%), Gaps = 5/192 (2%)
Query: 53 LRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 110
L N G +G N + G N N G+GL N G G N +G +G N TG
Sbjct: 325 LGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGN 384
Query: 111 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 167
+G N +G G+ N NTG N NTG NTG + NTG N
Sbjct: 385 IGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQAN 444
Query: 168 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 227
TG + NTG NTG N+G + N+G L NTG N N
Sbjct: 445 TGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNIN 504
Query: 228 TGGLGLRNCNTG 239
TGG N NTG
Sbjct: 505 TGGFNAGNLNTG 516
>sp|Q9SE95|FIP2_ARATH FH protein interacting protein FIP2 OS=Arabidopsis thaliana GN=FIP2
PE=1 SV=1
Length = 298
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 72/218 (33%), Gaps = 10/218 (4%)
Query: 1 MPPIVAPISTKGLRNCNTGGL-GLRN---CNTGGLGLRNCNTGGLGLRNC-NTGGLGLRN 55
+P + P ++ LR + L GL++ + +G + + C T + R
Sbjct: 76 IPSLSDPDCSELLREADYYQLLGLKDGIKDSRKEVGEVEAELTRIDIIKCIQTERVRFRG 135
Query: 56 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 115
N G+ L + + + N RN + G N LR
Sbjct: 136 VNLSGIDLSKLDLSLVDFSYACLRNVFFSRTNLQCAKFRNADAEGSIFHNA-----ILRE 190
Query: 116 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 175
C LR G L++ N L C+ G LR + L N N G L
Sbjct: 191 CEFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHLQNADLTNANLEGANLEG 250
Query: 176 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 213
N G L N N G L+ + LR + G L
Sbjct: 251 ANLKGAKLSNANFKGANLQRAYLRHVNLREAHMEGANL 288
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 55/177 (31%), Gaps = 5/177 (2%)
Query: 66 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 125
T + R N G+ L + + + N RN + G N
Sbjct: 126 IQTERVRFRGVNLSGIDLSKLDLSLVDFSYACLRNVFFSRTNLQCAKFRNADAEGSIFHN 185
Query: 126 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 185
LR C LR G L++ N L C+ G LR + L N
Sbjct: 186 A-----ILRECEFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHLQNADLTN 240
Query: 186 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLI 242
N G L N G L N N G L+ + LR + G L N G I
Sbjct: 241 ANLEGANLEGANLKGAKLSNANFKGANLQRAYLRHVNLREAHMEGANLGGANMTGAI 297
>sp|Q7L273|KCTD9_HUMAN BTB/POZ domain-containing protein KCTD9 OS=Homo sapiens GN=KCTD9
PE=2 SV=1
Length = 389
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 56/179 (31%), Gaps = 15/179 (8%)
Query: 2 PPIVAPISTKGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 61
P +PIS K GL + L LR N L CN
Sbjct: 194 PEDHSPISRKEFVRFLLATPTKSELRCQGLNFSGADLSRLDLRYINFKMANLSRCNLAHA 253
Query: 62 GL-----RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG-----LRNCNTGGL 111
L + G L N G+ + N G L+ CN L N G+
Sbjct: 254 NLCCANLERADLSGSVLDCANLQGVKMLCSNAEGASLKLCNFEDPSGLKANLEGANLKGV 313
Query: 112 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 170
+ G+ LR L+NCN LR G L NC+ G L+ N G
Sbjct: 314 DMEGSQMTGINLRVATLKNAKLKNCN-----LRGATLAGTDLENCDLSGCDLQEANLRG 367
Score = 31.6 bits (70), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 55/165 (33%), Gaps = 15/165 (9%)
Query: 90 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-----RNCNTGGLGLRNCNTGGLGLR 144
GL + L LR N L CN L + G L N G+ +
Sbjct: 222 GLNFSGADLSRLDLRYINFKMANLSRCNLAHANLCCANLERADLSGSVLDCANLQGVKML 281
Query: 145 NCNTGGLGLRNCNTGGLG-----LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 199
N G L+ CN L N G+ + G+ LR L+NCN
Sbjct: 282 CSNAEGASLKLCNFEDPSGLKANLEGANLKGVDMEGSQMTGINLRVATLKNAKLKNCN-- 339
Query: 200 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLIVP 244
LR G L NC+ G L+ N G ++ ++ P
Sbjct: 340 ---LRGATLAGTDLENCDLSGCDLQEANLRGSNVKGAIFEEMLTP 381
>sp|Q4N8L0|DRE2_THEPA Anamorsin homolog OS=Theileria parva GN=TP01_0461 PE=3 SV=1
Length = 317
Score = 30.8 bits (68), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 11/70 (15%)
Query: 12 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 71
G ++ NT GL+ L L++ NT GL++ NT GL+ LGL+N L
Sbjct: 48 GTKSLNTKSFGLK-----SLSLKSLNTKSSGLKSLNTKSSGLK-----SLGLKN-EFDYL 96
Query: 72 GLRNCNTGGL 81
+ GL
Sbjct: 97 TFEQVKSSGL 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.145 0.478
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,789,591
Number of Sequences: 539616
Number of extensions: 7496857
Number of successful extensions: 16242
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 10767
Number of HSP's gapped (non-prelim): 1572
length of query: 272
length of database: 191,569,459
effective HSP length: 116
effective length of query: 156
effective length of database: 128,974,003
effective search space: 20119944468
effective search space used: 20119944468
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)